>VF12_VARV (P33871) Protein F12|
          Length = 635

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +1

Query: 76  MPAKKKLV*KGHLVSSHSHSLDFSYLCTPTVSIYTSSRVRGPEPPSVLMMPRRRGNTSVP 255
           +P   K + +  L +  S SLD +++ T TVS+Y +    GP P  +   P   GNT V 
Sbjct: 197 LPFDIKYISRDELWAQISSSLDQTHIKTITVSVYGAITDNGPMPYMISTYP---GNTFVN 253

Query: 256 WRS 264
           + S
Sbjct: 254 FNS 256

>PDLI5_RAT (Q62920) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like|
           PDZ and LIM domains protein)
          Length = 591

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 339 WRRPRCWTTAPSTVRSRNAEAASHTRSPRHGRVSPPPRHHED 214
           W+RP     APST R  N+ ++S T +P    V PP    +D
Sbjct: 358 WQRPN--QAAPSTGRISNSASSSGTGAPMKPAVGPPQPSDQD 397

>TTLL4_MOUSE (Q80UG8) Tubulin--tyrosine ligase-like protein 4|
          Length = 1193

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 109 HLVSSHSHSLDFSYLCTPTVSIYTSSRVRGPEPPSVL 219
           HL++SH H L+ S  C   V        R P PPS L
Sbjct: 417 HLLASHVHGLNPSPACGSAVDPQVLGEDRAPVPPSSL 453

>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog|
          Length = 772

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 345 GKWRRPRCWTTAPSTVRSRN-AEAASHTRSPRHGRVSPPPRHHEDRR 208
           G+ +R R    + S  RSR+ + + S +RS  HGR S   R HE RR
Sbjct: 23  GRKQRSRSRGRSRSRSRSRSRSRSRSRSRSRSHGRSSRRRREHERRR 69

>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 345  GKWRRPRCWTTAPSTVRSRNAEAASHTRSPRHGRVS 238
            G W +PR   T PST + R  + +S  R+PR  R S
Sbjct: 2297 GHWEKPRITCTDPSTYKRRLQKRSS--RAPRRSRPS 2330

>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1181

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 273 SHTRSPRHGRVSPPPRHHEDRRWLGTPDPRG 181
           S+T  PR GR S  P H  +   + TP P G
Sbjct: 165 SYTPKPRGGRKSSSPTHTREEGRMHTPSPAG 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,682,735
Number of Sequences: 219361
Number of extensions: 1295315
Number of successful extensions: 3640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3636
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)