ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470637.1| Oryza sativa (japonica cultivar-group), predic... 200 4e-48
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 200 4e-48
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
4gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome... 200 4e-48
5dbj|AK064791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
6gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
7gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
8gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
10dbj|AK099727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
12ref|NM_194579.1| Oryza sativa (japonica cultivar-group) putative... 131 3e-27
13dbj|AB017069.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 107 4e-20
14gb|BT012752.1| Lycopersicon esculentum clone 113691R, mRNA sequence 103 6e-19
15gb|BT014185.1| Lycopersicon esculentum clone 133362F, mRNA sequence 86 1e-13
16ref|NM_189098.1| Oryza sativa (japonica cultivar-group), mRNA 84 6e-13
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
18dbj|AK119463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
19dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
20ref|NM_126257.2| Arabidopsis thaliana unknown protein AT2G01960 ... 70 9e-09
21ref|NM_126258.2| Arabidopsis thaliana transporter AT2G01970 mRNA... 70 9e-09
22gb|AC006532.5| Arabidopsis thaliana chromosome 2 clone F14H20 ma... 70 9e-09
23gb|AY060579.1| Arabidopsis thaliana At2g01970/F14H20.4 mRNA sequ... 70 9e-09
24gb|AY058869.1| Arabidopsis thaliana At2g01970/F14H20.4 mRNA, com... 70 9e-09
25dbj|AK221852.1| Arabidopsis thaliana mRNA for putative endosomal... 70 9e-09
26emb|BX822006.1|CNS0A962 Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
27ref|NM_123090.2| Arabidopsis thaliana transporter AT5G37310 mRNA... 60 8e-06
28gb|AF187853.1|AF187853 Populus x canescens putative multispannin... 60 8e-06
29emb|BX829932.1|CNS0A26L Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
30emb|BX820415.1|CNS0A9N9 Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
31gb|AY110778.1| Zea mays CL48976_1 mRNA sequence 52 0.002
32emb|AJ718624.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC3-33-35... 50 0.008
33gb|AC161473.5| Pan troglodytes BAC clone CH251-460F23 from chrom... 48 0.031
34gb|AC161121.3| Pan troglodytes BAC clone CH251-720M8 from chromo... 48 0.031
35gb|AC151582.3| Pan troglodytes BAC clone RP43-3F18 from chromoso... 48 0.031
36ref|NM_100738.2| Arabidopsis thaliana PPCK1 (PHOSPHOENOLPYRUVATE... 44 0.49
37gb|AY065297.1| Arabidopsis thaliana putative calcium-dependent p... 44 0.49
38gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana... 44 0.49
39gb|AF162660.1|AF162660 Arabidopsis thaliana phosphoenolpyruvate ... 44 0.49
40emb|BX322664.6| Zebrafish DNA sequence from clone CH211-232D9 in... 44 0.49
41gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete... 42 1.9
42emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chro... 42 1.9
43gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complet... 42 1.9
44gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complet... 42 1.9
45gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete... 42 1.9
46gb|AC156548.13| Mus musculus chromosome 5, clone RP23-412C8, com... 40 7.6
47gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 7.6
48gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complet... 40 7.6
49gb|AC146219.2| Pan troglodytes BAC clone CH251-284M11 from Y, co... 40 7.6
50gb|CP000001.1| Bacillus cereus E33L, complete genome 40 7.6
51ref|NM_010605.3| Mus musculus potassium inwardly-rectifying chan... 40 7.6
52emb|AL161742.7| Human DNA sequence from clone RP4-597J3 on chrom... 40 7.6
53dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, c... 40 7.6
54gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.6
55gb|AF403131.1| Mus musculus G protein-gated K+ channel subunit 4... 40 7.6
56dbj|AK137600.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 7.6
57dbj|AK164058.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 7.6
58gb|AC092799.2| Homo sapiens chromosome 1 clone RP11-5F19, comple... 40 7.6
59gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromo... 40 7.6
60gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 3... 40 7.6
61dbj|AK052891.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 40 7.6
62gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, com... 40 7.6
63gb|AC007247.5|AC007247 Homo sapiens BAC clone RP11-305H21 from Y... 40 7.6
64dbj|AB106555.1| Sus scrofa IL-16 gene for interleukin 16, comple... 40 7.6
65gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, com... 40 7.6
66emb|AL512360.2|CNS07EF9 Human chromosome 14 DNA sequence BAC R-7... 40 7.6
67gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome... 40 7.6
68gb|AC007176.1|AC007176 Drosophila melanogaster, chromosome 2L, r... 40 7.6
69gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71... 40 7.6
70gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay... 40 7.6
71gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 7.6
72gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome ... 40 7.6
73emb|AL133401.16| Mouse DNA sequence from clone RP21-72L18 on chr... 40 7.6 
>ref|XM_470637.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1788

 Score =  200 bits (101), Expect = 4e-48
 Identities = 163/184 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  ttactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagcc 436
            ||||||||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||
Sbjct: 1788 ttactcacacttgatggatttgtatatgtgacggacaaagaacaatgcggcacggaaacc 1729

                                                                        
Query: 437  caccatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaa 496
             | ||| ||||||||||||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 1728 gatcatgcccagcatcaggaagaaagcatagcagatgcaagccatgtagccgaagaagaa 1669

                                                                        
Query: 497  agatgtctgcatgaagccagacatatccgatcgtgcatagtantagtacagacagtagcc 556
             ||||||||||| || ||||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 1668 tgatgtctgcataaatccagacatatctgatcgtgcataatagtagtacagacaataccc 1609

                
Query: 557  atag 560
            ||||
Sbjct: 1608 atag 1605
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  200 bits (101), Expect = 4e-48
 Identities = 163/184 (88%)
 Strand = Plus / Minus

                                                                           
Query: 377     ttactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagcc 436
               ||||||||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||
Sbjct: 7197191 ttactcacacttgatggatttgtatatgtgacggacaaagaacaatgcggcacggaaacc 7197132

                                                                           
Query: 437     caccatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaa 496
                | ||| ||||||||||||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 7197131 gatcatgcccagcatcaggaagaaagcatagcagatgcaagccatgtagccgaagaagaa 7197072

                                                                           
Query: 497     agatgtctgcatgaagccagacatatccgatcgtgcatagtantagtacagacagtagcc 556
                ||||||||||| || ||||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 7197071 tgatgtctgcataaatccagacatatctgatcgtgcataatagtagtacagacaataccc 7197012

                   
Query: 557     atag 560
               ||||
Sbjct: 7197011 atag 7197008



 Score =  165 bits (83), Expect = 2e-37
 Identities = 152/171 (88%), Gaps = 8/171 (4%)
 Strand = Plus / Minus

                                                                           
Query: 177     atcacaccagtcgcac--aatgacaagaaatttataggttcattacctcttcctatgaat 234
               |||||| |||||||||  || || || ||||||||||||||||||||| |||||||||||
Sbjct: 7197384 atcacagcagtcgcacaaaaggagaacaaatttataggttcattacctgttcctatgaat 7197325

                                                                           
Query: 235     aatggcctaatctcaaacatgccaatctcttctagttgcttcctgttgcacgcgagagct 294
               |||||||||| || ||||||| |||||   ||||| ||| ||||||||   |||||||||
Sbjct: 7197324 aatggcctaacctgaaacatggcaatc---tctagctgc-tcctgttg--tgcgagagct 7197271

                                                                  
Query: 295     aaccttttctatactgggacttcttagcggcaccaaaaaggagtacaactc 345
               ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7197270 aaccttttctatactgggacttcttagtggcaccaaaaaggagtacaactc 7197220



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/40 (90%), Gaps = 2/40 (5%)
 Strand = Plus / Minus

                                                       
Query: 38      gaggcatcatctctacacgt--gttattctgccataggaa 75
               |||||||||||||||||| |  |||||||||| |||||||
Sbjct: 7197533 gaggcatcatctctacacttcagttattctgctataggaa 7197494
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  200 bits (101), Expect = 4e-48
 Identities = 163/184 (88%)
 Strand = Plus / Minus

                                                                           
Query: 377     ttactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagcc 436
               ||||||||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||
Sbjct: 7195086 ttactcacacttgatggatttgtatatgtgacggacaaagaacaatgcggcacggaaacc 7195027

                                                                           
Query: 437     caccatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaa 496
                | ||| ||||||||||||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 7195026 gatcatgcccagcatcaggaagaaagcatagcagatgcaagccatgtagccgaagaagaa 7194967

                                                                           
Query: 497     agatgtctgcatgaagccagacatatccgatcgtgcatagtantagtacagacagtagcc 556
                ||||||||||| || ||||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 7194966 tgatgtctgcataaatccagacatatctgatcgtgcataatagtagtacagacaataccc 7194907

                   
Query: 557     atag 560
               ||||
Sbjct: 7194906 atag 7194903



 Score =  165 bits (83), Expect = 2e-37
 Identities = 152/171 (88%), Gaps = 8/171 (4%)
 Strand = Plus / Minus

                                                                           
Query: 177     atcacaccagtcgcac--aatgacaagaaatttataggttcattacctcttcctatgaat 234
               |||||| |||||||||  || || || ||||||||||||||||||||| |||||||||||
Sbjct: 7195279 atcacagcagtcgcacaaaaggagaacaaatttataggttcattacctgttcctatgaat 7195220

                                                                           
Query: 235     aatggcctaatctcaaacatgccaatctcttctagttgcttcctgttgcacgcgagagct 294
               |||||||||| || ||||||| |||||   ||||| ||| ||||||||   |||||||||
Sbjct: 7195219 aatggcctaacctgaaacatggcaatc---tctagctgc-tcctgttg--tgcgagagct 7195166

                                                                  
Query: 295     aaccttttctatactgggacttcttagcggcaccaaaaaggagtacaactc 345
               ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7195165 aaccttttctatactgggacttcttagtggcaccaaaaaggagtacaactc 7195115



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/40 (90%), Gaps = 2/40 (5%)
 Strand = Plus / Minus

                                                       
Query: 38      gaggcatcatctctacacgt--gttattctgccataggaa 75
               |||||||||||||||||| |  |||||||||| |||||||
Sbjct: 7195428 gaggcatcatctctacacttcagttattctgctataggaa 7195389
to top
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05,
             complete sequence
          Length = 99133

 Score =  200 bits (101), Expect = 4e-48
 Identities = 163/184 (88%)
 Strand = Plus / Minus

                                                                         
Query: 377   ttactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagcc 436
             ||||||||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||
Sbjct: 23944 ttactcacacttgatggatttgtatatgtgacggacaaagaacaatgcggcacggaaacc 23885

                                                                         
Query: 437   caccatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaa 496
              | ||| ||||||||||||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 23884 gatcatgcccagcatcaggaagaaagcatagcagatgcaagccatgtagccgaagaagaa 23825

                                                                         
Query: 497   agatgtctgcatgaagccagacatatccgatcgtgcatagtantagtacagacagtagcc 556
              ||||||||||| || ||||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 23824 tgatgtctgcataaatccagacatatctgatcgtgcataatagtagtacagacaataccc 23765

                 
Query: 557   atag 560
             ||||
Sbjct: 23764 atag 23761



 Score =  165 bits (83), Expect = 2e-37
 Identities = 152/171 (88%), Gaps = 8/171 (4%)
 Strand = Plus / Minus

                                                                         
Query: 177   atcacaccagtcgcac--aatgacaagaaatttataggttcattacctcttcctatgaat 234
             |||||| |||||||||  || || || ||||||||||||||||||||| |||||||||||
Sbjct: 24137 atcacagcagtcgcacaaaaggagaacaaatttataggttcattacctgttcctatgaat 24078

                                                                         
Query: 235   aatggcctaatctcaaacatgccaatctcttctagttgcttcctgttgcacgcgagagct 294
             |||||||||| || ||||||| |||||   ||||| ||| ||||||||   |||||||||
Sbjct: 24077 aatggcctaacctgaaacatggcaatc---tctagctgc-tcctgttg--tgcgagagct 24024

                                                                
Query: 295   aaccttttctatactgggacttcttagcggcaccaaaaaggagtacaactc 345
             ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24023 aaccttttctatactgggacttcttagtggcaccaaaaaggagtacaactc 23973



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/40 (90%), Gaps = 2/40 (5%)
 Strand = Plus / Minus

                                                     
Query: 38    gaggcatcatctctacacgt--gttattctgccataggaa 75
             |||||||||||||||||| |  |||||||||| |||||||
Sbjct: 24286 gaggcatcatctctacacttcagttattctgctataggaa 24247
to top
>dbj|AK064791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C08, full
            insert sequence
          Length = 2402

 Score =  200 bits (101), Expect = 4e-48
 Identities = 163/184 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  ttactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagcc 436
            ||||||||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||
Sbjct: 1975 ttactcacacttgatggatttgtatatgtgacggacaaagaacaatgcggcacggaaacc 1916

                                                                        
Query: 437  caccatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaa 496
             | ||| ||||||||||||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 1915 gatcatgcccagcatcaggaagaaagcatagcagatgcaagccatgtagccgaagaagaa 1856

                                                                        
Query: 497  agatgtctgcatgaagccagacatatccgatcgtgcatagtantagtacagacagtagcc 556
             ||||||||||| || ||||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 1855 tgatgtctgcataaatccagacatatctgatcgtgcataatagtagtacagacaataccc 1796

                
Query: 557  atag 560
            ||||
Sbjct: 1795 atag 1792



 Score =  165 bits (83), Expect = 2e-37
 Identities = 152/171 (88%), Gaps = 8/171 (4%)
 Strand = Plus / Minus

                                                                        
Query: 177  atcacaccagtcgcac--aatgacaagaaatttataggttcattacctcttcctatgaat 234
            |||||| |||||||||  || || || ||||||||||||||||||||| |||||||||||
Sbjct: 2168 atcacagcagtcgcacaaaaggagaacaaatttataggttcattacctgttcctatgaat 2109

                                                                        
Query: 235  aatggcctaatctcaaacatgccaatctcttctagttgcttcctgttgcacgcgagagct 294
            |||||||||| || ||||||| |||||   ||||| ||| ||||||||   |||||||||
Sbjct: 2108 aatggcctaacctgaaacatggcaatc---tctagctgc-tcctgttg--tgcgagagct 2055

                                                               
Query: 295  aaccttttctatactgggacttcttagcggcaccaaaaaggagtacaactc 345
            ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2054 aaccttttctatactgggacttcttagtggcaccaaaaaggagtacaactc 2004



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/40 (90%), Gaps = 2/40 (5%)
 Strand = Plus / Minus

                                                    
Query: 38   gaggcatcatctctacacgt--gttattctgccataggaa 75
            |||||||||||||||||| |  |||||||||| |||||||
Sbjct: 2317 gaggcatcatctctacacttcagttattctgctataggaa 2278
to top
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20,
              complete sequence
          Length = 131599

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                          
Query: 378    tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
              |||||||| ||||| || |||||||| || ||||| || | ||||||||||||||| || 
Sbjct: 100332 tactcacatttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaacca 100391

                                                                          
Query: 438    accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
              ||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 100392 accatgcccagcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaat 100451

                                     
Query: 498    gatgtctgcatgaagccagacat 520
              |||||||||||||| ||||||||
Sbjct: 100452 gatgtctgcatgaacccagacat 100474
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                          
Query: 378    tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
              |||||||| ||||| || |||||||| || ||||| || | ||||||||||||||| || 
Sbjct: 819475 tactcacatttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaacca 819534

                                                                          
Query: 438    accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
              ||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 819535 accatgcccagcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaat 819594

                                     
Query: 498    gatgtctgcatgaagccagacat 520
              |||||||||||||| ||||||||
Sbjct: 819595 gatgtctgcatgaacccagacat 819617
to top
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12,
              complete sequence
          Length = 129420

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Minus

                                                                          
Query: 378    tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
              |||||||| ||||| || |||||||| || ||||| || | ||||||||||||||| || 
Sbjct: 116707 tactcacatttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaacca 116648

                                                                          
Query: 438    accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
              ||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 116647 accatgcccagcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaat 116588

                                     
Query: 498    gatgtctgcatgaagccagacat 520
              |||||||||||||| ||||||||
Sbjct: 116587 gatgtctgcatgaacccagacat 116565
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                          
Query: 378    tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
              |||||||| ||||| || |||||||| || ||||| || | ||||||||||||||| || 
Sbjct: 819475 tactcacatttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaacca 819534

                                                                          
Query: 438    accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
              ||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 819535 accatgcccagcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaat 819594

                                     
Query: 498    gatgtctgcatgaagccagacat 520
              |||||||||||||| ||||||||
Sbjct: 819595 gatgtctgcatgaacccagacat 819617
to top
>dbj|AK099727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E14, full
            insert sequence
          Length = 2136

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Minus

                                                                        
Query: 378  tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
            |||||||| ||||| || |||||||| || ||||| || | ||||||||||||||| || 
Sbjct: 1799 tactcacatttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaacca 1740

                                                                        
Query: 438  accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
            ||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 1739 accatgcccagcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaat 1680

                                   
Query: 498  gatgtctgcatgaagccagacat 520
            |||||||||||||| ||||||||
Sbjct: 1679 gatgtctgcatgaacccagacat 1657
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  141 bits (71), Expect = 3e-30
 Identities = 125/143 (87%)
 Strand = Plus / Plus

                                                                          
Query: 378    tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
              |||||||| ||||| || |||||||| || ||||| || | ||||||||||||||| || 
Sbjct: 819472 tactcacatttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaacca 819531

                                                                          
Query: 438    accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
              ||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| 
Sbjct: 819532 accatgcccagcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaat 819591

                                     
Query: 498    gatgtctgcatgaagccagacat 520
              |||||||||||||| ||||||||
Sbjct: 819592 gatgtctgcatgaacccagacat 819614
to top
>ref|NM_194579.1| Oryza sativa (japonica cultivar-group) putative endosomal protein
            (OSJNBb0012A20.16), mRNA
          Length = 1884

 Score =  131 bits (66), Expect = 3e-27
 Identities = 117/134 (87%)
 Strand = Plus / Minus

                                                                        
Query: 387  ttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagcccaccataccc 446
            ||||| || |||||||| || ||||| || | ||||||||||||||| || ||||| |||
Sbjct: 1739 ttgatggatttgtatatatggcgaacgaacagcaaggcggcacggaaaccaaccatgccc 1680

                                                                        
Query: 447  agcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtctgc 506
            ||||| |||||||| || ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1679 agcatgaggaagaaggcgtagcagatgcaggccatgtaaccaaagaagaatgatgtctgc 1620

                          
Query: 507  atgaagccagacat 520
            ||||| ||||||||
Sbjct: 1619 atgaacccagacat 1606
to top
>dbj|AB017069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ8
          Length = 88128

 Score =  107 bits (54), Expect = 4e-20
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                         
Query: 447   agcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtctgc 506
             ||||| ||||||||| | ||||||||||| |||||||| ||||||||||| || ||||||
Sbjct: 41485 agcatgaggaagaatccgtagcagatgcaagccatgtagccaaagaagaaggaagtctgc 41544

                                                                  
Query: 507   atgaagccagacatatccgatcgtgcatagtantagtacagacagtagccata 559
             ||||| || |||||||| |||||||||||||| || ||||  |||||| ||||
Sbjct: 41545 atgaaccctgacatatctgatcgtgcatagtagtaatacaagcagtaggcata 41597
to top
>gb|BT012752.1| Lycopersicon esculentum clone 113691R, mRNA sequence
          Length = 2199

 Score =  103 bits (52), Expect = 6e-19
 Identities = 150/183 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  tactcacacttgatcgacttgtatatgtgccgaacaaagaacaaggcggcacggaagccc 437
            ||||| |||||||| |||  |||||| || || ||||| || | ||| |||||||| || 
Sbjct: 1835 tactcgcacttgattgaccggtatatatgacggacaaaaaatagggctgcacggaaacca 1776

                                                                        
Query: 438  accatacccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaa 497
            ||  | |||||||| ||||||||  ||||||||||||| |||||||| ||||| ||||| 
Sbjct: 1775 acagtccccagcatgaggaagaaaccatagcagatgcaagccatgtatccaaaaaagaat 1716

                                                                        
Query: 498  gatgtctgcatgaagccagacatatccgatcgtgcatagtantagtacagacagtagcca 557
            || || |||||||||||||||||||| || || ||||| || || ||||  |||||||||
Sbjct: 1715 gaggtttgcatgaagccagacatatcggaacgggcataatagtaatacaagcagtagcca 1656

               
Query: 558  tag 560
            |||
Sbjct: 1655 tag 1653
to top
>gb|BT014185.1| Lycopersicon esculentum clone 133362F, mRNA sequence
          Length = 2167

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 96/114 (84%)
 Strand = Plus / Minus

                                                                        
Query: 447  agcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtctgc 506
            ||||| || ||||| |||||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 1801 agcatgagaaagaaggcatagcaaatgcaagccatgtaaccaaagaagaatgaggtttgc 1742

                                                                  
Query: 507  atgaagccagacatatccgatcgtgcatagtantagtacagacagtagccatag 560
            ||||| || ||||| || ||||| ||||| || || ||||| ||||||||||||
Sbjct: 1741 atgaaacctgacatgtctgatcgggcataatagtaatacaggcagtagccatag 1688
to top
>ref|NM_189098.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1770

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 444  cccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtc 503
            |||||||| ||||||||  ||||||||| ||| | |||||| || |||||||| ||||||
Sbjct: 1703 cccagcatgaggaagaagccatagcagacgcaggtcatgtagccgaagaagaaggatgtc 1644

                                                     
Query: 504  tgcatgaagccagacatatccgatcgtgcatagtantagta 544
            ||||||||||| ||||| || ||||| |||| ||| |||||
Sbjct: 1643 tgcatgaagcctgacatgtctgatcgggcatggtagtagta 1603
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                           
Query: 444     cccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtc 503
               |||||||| ||||||||  ||||||||| ||| | |||||| || |||||||| ||||||
Sbjct: 3628833 cccagcatgaggaagaagccatagcagacgcaggtcatgtagccgaagaagaaggatgtc 3628774

                                                        
Query: 504     tgcatgaagccagacatatccgatcgtgcatagtantagta 544
               ||||||||||| ||||| || ||||| |||| ||| |||||
Sbjct: 3628773 tgcatgaagcctgacatgtctgatcgggcatggtagtagta 3628733
to top
>dbj|AK119463.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E12, full
            insert sequence
          Length = 2900

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 444  cccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtc 503
            |||||||| ||||||||  ||||||||| ||| | |||||| || |||||||| ||||||
Sbjct: 2558 cccagcatgaggaagaagccatagcagacgcaggtcatgtagccgaagaagaaggatgtc 2499

                                                     
Query: 504  tgcatgaagccagacatatccgatcgtgcatagtantagta 544
            ||||||||||| ||||| || ||||| |||| ||| |||||
Sbjct: 2498 tgcatgaagcctgacatgtctgatcgggcatggtagtagta 2458
to top
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                          
Query: 444    cccagcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtc 503
              |||||||| ||||||||  ||||||||| ||| | |||||| || |||||||| ||||||
Sbjct: 107339 cccagcatgaggaagaagccatagcagacgcaggtcatgtagccgaagaagaaggatgtc 107280

                                                       
Query: 504    tgcatgaagccagacatatccgatcgtgcatagtantagta 544
              ||||||||||| ||||| || ||||| |||| ||| |||||
Sbjct: 107279 tgcatgaagcctgacatgtctgatcgggcatggtagtagta 107239
to top
>ref|NM_126257.2| Arabidopsis thaliana unknown protein AT2G01960 mRNA, complete cds
          Length = 1412

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                        
Query: 471  atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
            ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || |||| |
Sbjct: 1286 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgatctt 1345

                          
Query: 531  gcatagtantagta 544
            || ||||| |||||
Sbjct: 1346 gcgtagtagtagta 1359
to top
>ref|NM_126258.2| Arabidopsis thaliana transporter AT2G01970 mRNA, complete cds
          Length = 2171

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
            ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || |||| |
Sbjct: 1751 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgatctt 1692

                          
Query: 531  gcatagtantagta 544
            || ||||| |||||
Sbjct: 1691 gcgtagtagtagta 1678
to top
>gb|AC006532.5| Arabidopsis thaliana chromosome 2 clone F14H20 map CIC11A04, complete
             sequence
          Length = 76976

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                         
Query: 471   atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
             ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || |||| |
Sbjct: 23851 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgatctt 23910

                           
Query: 531   gcatagtantagta 544
             || ||||| |||||
Sbjct: 23911 gcgtagtagtagta 23924
to top
>gb|AY060579.1| Arabidopsis thaliana At2g01970/F14H20.4 mRNA sequence
          Length = 2170

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
            ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || |||| |
Sbjct: 1750 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgatctt 1691

                          
Query: 531  gcatagtantagta 544
            || ||||| |||||
Sbjct: 1690 gcgtagtagtagta 1677
to top
>gb|AY058869.1| Arabidopsis thaliana At2g01970/F14H20.4 mRNA, complete cds
          Length = 2131

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
            ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || |||| |
Sbjct: 1749 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgatctt 1690

                          
Query: 531  gcatagtantagta 544
            || ||||| |||||
Sbjct: 1689 gcgtagtagtagta 1676
to top
>dbj|AK221852.1| Arabidopsis thaliana mRNA for putative endosomal protein, partial
           cds, clone: RAFL22-07-O07
          Length = 713

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 471 atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
           ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || |||| |
Sbjct: 282 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgatctt 223

                         
Query: 531 gcatagtantagta 544
           || ||||| |||||
Sbjct: 222 gcgtagtagtagta 209
to top
>emb|BX822006.1|CNS0A962 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZF08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 754

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 471 atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
           ||||| ||||||||||| |||||||| ||||| |||||||| |||||||| || | || |
Sbjct: 366 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccagacatgtctgttctt 307

                         
Query: 531 gcatagtantagta 544
           || ||||| |||||
Sbjct: 306 gcgtagtagtagta 293
to top
>ref|NM_123090.2| Arabidopsis thaliana transporter AT5G37310 mRNA, complete cds
          Length = 1808

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 447  agcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaa 496
            ||||| ||||||||| | ||||||||||| |||||||| |||||||||||
Sbjct: 1731 agcatgaggaagaatccgtagcagatgcaagccatgtagccaaagaagaa 1682
to top
>gb|AF187853.1|AF187853 Populus x canescens putative multispanning membrane protein (MMP)
           mRNA, partial cds
          Length = 762

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                       
Query: 447 agcatcaggaagaatgcatagcagatgcacgccatgtacccaaagaagaaagatgtctgc 506
           ||||| ||||||||  |||| || | ||| |||||||| |||||||| || || || |||
Sbjct: 246 agcatgaggaagaaaccataacaaacgcaggccatgtagccaaagaaaaatgaggtttgc 187

                                                                
Query: 507 atgaagccagacatatccgatcgtgcatagtantagtacagacagtagccata 559
           |||||||| |||||||| |||| |||| |||| || ||||  || ||||||||
Sbjct: 186 atgaagccggacatatctgatcttgcaaagtagtaatacaagcaatagccata 134
to top
>emb|BX829932.1|CNS0A26L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB47ZC08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1174

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 466 agcagatgcacgccatgtaccca-aagaagaaagatgtctgcatgaagccagacatatcc 524
           |||||| ||| |||||||| ||| |||||||| || ||||||||||| || || ||||| 
Sbjct: 939 agcagaagcaagccatgtagccagaagaagaaggaagtctgcatgaaccctgagatatct 880

                                              
Query: 525 gatcgtgcatagtantagtacagacagtagccata 559
           | |||||||||||| || ||||  |||||| ||||
Sbjct: 879 gttcgtgcatagtagtaatacaagcagtaggcata 845
to top
>emb|BX820415.1|CNS0A9N9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH2ZG12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 752

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 471 atgcacgccatgtacccaaagaagaaagatgtctgcatgaagccagacatatccgatcgt 530
           ||||| ||||||||||| |||||||| ||||| |||||||| ||| |||| || | || |
Sbjct: 366 atgcaagccatgtacccgaagaagaaggatgtttgcatgaaaccacacatgtctgttctt 307

                         
Query: 531 gcatagtantagta 544
           || ||||| |||||
Sbjct: 306 gcgtagtagtagta 293
to top
>gb|AY110778.1| Zea mays CL48976_1 mRNA sequence
          Length = 679

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 429 cggaagcccaccatacccagcatcaggaagaatgcatagcagatgcacgccatgtaccca 488
           |||||||| ||| | |||||||| ||||||||  | ||||| | ||| | |||||| || 
Sbjct: 358 cggaagccgaccgttcccagcatgaggaagaagccgtagcacacgcaggtcatgtagccg 417

                                                 
Query: 489 aagaagaaagatgtctgcatgaagccagacatatccga 526
           |||||||| || ||||||||||| || ||||| |||||
Sbjct: 418 aagaagaaggacgtctgcatgaaccccgacatgtccga 455
to top
>emb|AJ718624.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC3-33-350, cultivar Bright
           Yellow 2
          Length = 268

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 447 agcatcaggaagaatgcatagcagatgcacgccatgtacccaaag 491
           ||||| ||||||||  ||||||||||||| |||||||| ||||||
Sbjct: 50  agcatgaggaagaaaccatagcagatgcaagccatgtatccaaag 6
to top
>gb|AC161473.5| Pan troglodytes BAC clone CH251-460F23 from chromosome 7, complete
             sequence
          Length = 170605

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 486   ccaaagaagaaagatgtctgcatg 509
             ||||||||||||||||||||||||
Sbjct: 40110 ccaaagaagaaagatgtctgcatg 40087
to top
>gb|AC161121.3| Pan troglodytes BAC clone CH251-720M8 from chromosome 7, complete
             sequence
          Length = 183573

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 486   ccaaagaagaaagatgtctgcatg 509
             ||||||||||||||||||||||||
Sbjct: 26840 ccaaagaagaaagatgtctgcatg 26863
to top
>gb|AC151582.3| Pan troglodytes BAC clone RP43-3F18 from chromosome 7, complete
             sequence
          Length = 197992

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 486   ccaaagaagaaagatgtctgcatg 509
             ||||||||||||||||||||||||
Sbjct: 98716 ccaaagaagaaagatgtctgcatg 98693
to top
>ref|NM_100738.2| Arabidopsis thaliana PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE);
            kinase AT1G08650 (PPCK1) mRNA, complete cds
          Length = 1376

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 329  aaaaaggagtacaactctgctt 350
            ||||||||||||||||||||||
Sbjct: 1329 aaaaaggagtacaactctgctt 1308
to top
>gb|AY065297.1| Arabidopsis thaliana putative calcium-dependent protein kinase
            (At1g08650) mRNA, complete cds
          Length = 1399

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 329  aaaaaggagtacaactctgctt 350
            ||||||||||||||||||||||
Sbjct: 1330 aaaaaggagtacaactctgctt 1309
to top
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
             complete sequence
          Length = 133843

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 329   aaaaaggagtacaactctgctt 350
             ||||||||||||||||||||||
Sbjct: 51579 aaaaaggagtacaactctgctt 51558
to top
>gb|AF162660.1|AF162660 Arabidopsis thaliana phosphoenolpyruvate carboxylase kinase mRNA,
            complete cds
          Length = 1351

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 329  aaaaaggagtacaactctgctt 350
            ||||||||||||||||||||||
Sbjct: 1304 aaaaaggagtacaactctgctt 1283
to top
>emb|BX322664.6| Zebrafish DNA sequence from clone CH211-232D9 in linkage group 19,
              complete sequence
          Length = 157585

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 86     aatttatataggttgttatggttcaa 111
              ||||||||||||||||| ||||||||
Sbjct: 152500 aatttatataggttgttttggttcaa 152475
to top
>gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete sequence
          Length = 154344

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 446   cagcatcaggaagaatgcata 466
             |||||||||||||||||||||
Sbjct: 43543 cagcatcaggaagaatgcata 43523
to top
>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part
              of the gene for alpha-catenin-like protein (MGC26194)
              (VR22), complete sequence
          Length = 163119

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    aatgacaagaaatttataggt 213
              |||||||||||||||||||||
Sbjct: 105765 aatgacaagaaatttataggt 105745
to top
>gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complete sequence
          Length = 123661

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 245   tctcaaacatgccaatctctt 265
             |||||||||||||||||||||
Sbjct: 47282 tctcaaacatgccaatctctt 47262
to top
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence
          Length = 201215

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 353   tgctcttcatcctccaacagcacct 377
             ||||||||| |||||||||||||||
Sbjct: 14781 tgctcttcagcctccaacagcacct 14757
to top
>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence
          Length = 155873

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    tctcaaacatgccaatctctt 265
              |||||||||||||||||||||
Sbjct: 107749 tctcaaacatgccaatctctt 107729
to top
>gb|AC156548.13| Mus musculus chromosome 5, clone RP23-412C8, complete sequence
          Length = 197890

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttctagttgcttcctgttgc 283
             ||||||||||||||||||||
Sbjct: 65427 ttctagttgcttcctgttgc 65408
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     agcggcaccaaaaaggagta 339
               ||||||||||||||||||||
Sbjct: 3405704 agcggcaccaaaaaggagta 3405723
to top
>gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complete sequence
          Length = 129727

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   ccaaagaagaaagatgtctgcatg 509
             ||||||| ||||||||||||||||
Sbjct: 33671 ccaaagaggaaagatgtctgcatg 33694
to top
>gb|AC146219.2| Pan troglodytes BAC clone CH251-284M11 from Y, complete sequence
          Length = 144446

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  aacttgcacagaaatttata 93
           ||||||||||||||||||||
Sbjct: 252 aacttgcacagaaatttata 233
to top
>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     agcggcaccaaaaaggagta 339
               ||||||||||||||||||||
Sbjct: 3409693 agcggcaccaaaaaggagta 3409712
to top
>ref|NM_010605.3| Mus musculus potassium inwardly-rectifying channel, subfamily J,
           member 5 (Kcnj5), mRNA
          Length = 4497

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 cttcatcctccaacagcacc 376
           ||||||||||||||||||||
Sbjct: 236 cttcatcctccaacagcacc 255
to top
>emb|AL161742.7| Human DNA sequence from clone RP4-597J3 on chromosome 1p32.1-32.3
            Contains the 5' end of the ROR1 gene for receptor
            tyrosine kinase-like orphan receptor 1, a ribosomal
            protein L19 (RPL19) pseudogene, a cofilin 1 (non-muscle)
            (CFL1) pseudogene and a CpG island, complete sequence
          Length = 114409

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   taggaacttgcacagaaatt 89
            ||||||||||||||||||||
Sbjct: 8517 taggaacttgcacagaaatt 8498
to top
>dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, complete sequences
          Length = 182507

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     aacttgcacagaaatttata 93
              ||||||||||||||||||||
Sbjct: 114339 aacttgcacagaaatttata 114320
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       aacttgcacagaaatttata 93
                ||||||||||||||||||||
Sbjct: 22625752 aacttgcacagaaatttata 22625771
to top
>gb|AF403131.1| Mus musculus G protein-gated K+ channel subunit 4 GIRK4 (Kcnj5) gene,
            complete cds
          Length = 20873

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  cttcatcctccaacagcacc 376
            ||||||||||||||||||||
Sbjct: 4436 cttcatcctccaacagcacc 4455
to top
>dbj|AK137600.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
           library, clone:9830164E09 product:potassium
           inwardly-rectifying channel, subfamily J, member 5, full
           insert sequence
          Length = 4710

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 cttcatcctccaacagcacc 376
           ||||||||||||||||||||
Sbjct: 349 cttcatcctccaacagcacc 368
to top
>dbj|AK164058.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430039D23 product:potassium
           inwardly-rectifying channel, subfamily J, member 5, full
           insert sequence
          Length = 4497

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 cttcatcctccaacagcacc 376
           ||||||||||||||||||||
Sbjct: 236 cttcatcctccaacagcacc 255
to top
>gb|AC092799.2| Homo sapiens chromosome 1 clone RP11-5F19, complete sequence
          Length = 162115

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   accagtcgcacaatgacaag 201
             ||||||||||||||||||||
Sbjct: 16058 accagtcgcacaatgacaag 16039
to top
>gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromosome y, complete
             sequence
          Length = 179557

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aacttgcacagaaatttata 93
             ||||||||||||||||||||
Sbjct: 39819 aacttgcacagaaatttata 39838
to top
>gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 37D, BAC clone
             BACR10I09, complete sequence
          Length = 169289

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   tctgcatgaagccagacata 521
             ||||||||||||||||||||
Sbjct: 23550 tctgcatgaagccagacata 23531
to top
>dbj|AK052891.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830027N20 product:potassium
           inwardly-rectifying channel, subfamily J, member 5, full
           insert sequence
          Length = 2441

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 cttcatcctccaacagcacc 376
           ||||||||||||||||||||
Sbjct: 236 cttcatcctccaacagcacc 255
to top
>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence
          Length = 197131

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   ttctagttgcttcctgttgc 283
             ||||||||||||||||||||
Sbjct: 97356 ttctagttgcttcctgttgc 97375
to top
>gb|AC007247.5|AC007247 Homo sapiens BAC clone RP11-305H21 from Y, complete sequence
          Length = 116788

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   aacttgcacagaaatttata 93
            ||||||||||||||||||||
Sbjct: 7111 aacttgcacagaaatttata 7092
to top
>dbj|AB106555.1| Sus scrofa IL-16 gene for interleukin 16, complete cds
          Length = 20252

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 333   aggagtacaactctgcttgctgct 356
             ||||| ||||||||||||||||||
Sbjct: 10005 aggagaacaactctgcttgctgct 10028
to top
>gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, complete sequence
          Length = 182530

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   acccagcatcaggaagaatg 462
             ||||||||||||||||||||
Sbjct: 80281 acccagcatcaggaagaatg 80300
to top
>emb|AL512360.2|CNS07EF9 Human chromosome 14 DNA sequence BAC R-737F10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192972

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    ctcaaacatgccaatctctt 265
              ||||||||||||||||||||
Sbjct: 120683 ctcaaacatgccaatctctt 120664
to top
>gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome 9, complete sequence
          Length = 192639

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cttcatcctccaacagcacc 376
              ||||||||||||||||||||
Sbjct: 114143 cttcatcctccaacagcacc 114124
to top
>gb|AC007176.1|AC007176 Drosophila melanogaster, chromosome 2L, region 37C1-46B2, BAC clones
              DS04472 and BACR48O01, complete sequence
          Length = 160005

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    tctgcatgaagccagacata 521
              ||||||||||||||||||||
Sbjct: 123482 tctgcatgaagccagacata 123463
to top
>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete
             sequence
          Length = 266205

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   tctgcatgaagccagacata 521
             ||||||||||||||||||||
Sbjct: 18731 tctgcatgaagccagacata 18712
to top
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    acagcaccttactcacactt 388
              ||||||||||||||||||||
Sbjct: 200402 acagcaccttactcacactt 200421
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     agcggcaccaaaaaggagta 339
               ||||||||||||||||||||
Sbjct: 3544469 agcggcaccaaaaaggagta 3544488
to top
>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence
          Length = 193235

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   cttcatcctccaacagcacc 376
             ||||||||||||||||||||
Sbjct: 36123 cttcatcctccaacagcacc 36104
to top
>emb|AL133401.16| Mouse DNA sequence from clone RP21-72L18 on chromosome 5, complete
             sequence
          Length = 158344

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttctagttgcttcctgttgc 283
             ||||||||||||||||||||
Sbjct: 15349 ttctagttgcttcctgttgc 15330


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,864,468
Number of Sequences: 3902068
Number of extensions: 4864468
Number of successful extensions: 98907
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98571
Number of HSP's gapped (non-prelim): 336
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top