| Clone Name | rbags18h13 |
|---|---|
| Clone Library Name | barley_pub |
>CR1_HUMAN (P17927) Complement receptor type 1 precursor (C3b/C4b receptor)| (CD35 antigen) Length = 2039 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Frame = -1 Query: 232 KHPHLAHCCLPMPSLWRNEHP---QDQLKKSMSISSPC----DWPVRTSLHCT 95 K PH + C P P + EH QD + C D SLHCT Sbjct: 1642 KLPHCSRVCQPPPEILHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCT 1694
>KPRS_SYNPX (Q7U7L5) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 331 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = +2 Query: 41 RRLILQSTTRNPRLQQQISAMQ*RPDGPITRRRDAHALLQLVLR 172 RRL L S T NP L ++I+A PDGP +R A L + ++ Sbjct: 20 RRLRLFSGTSNPGLAREIAAYLGVPDGPRVCKRFADGELYVQIQ 63
>K1849_HUMAN (Q96JH8) Protein KIAA1849| Length = 1073 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 11/78 (14%) Frame = -1 Query: 295 LTAAR*ASEAGGPQFLRLLFYKHPHL-----------AHCCLPMPSLWRNEHPQDQLKKS 149 L AA E GP +R Y+ PHL C P P+ P K S Sbjct: 226 LPAAAQGPEEPGPNAMRYSLYQSPHLLLLQGYSQQHPGVCAQPGPAHGGPADPSS--KPS 283 Query: 148 MSISSPCDWPVRTSLHCT 95 +S+S+P P LHCT Sbjct: 284 ISLSAPDILP----LHCT 297
>MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2054 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -1 Query: 223 HLAHCCLPMPSLWRNEHPQDQLKKSMSISSPCDWPVRTSLHCTYLLL 83 H HC LP+ W E P+ + +S SS D P + HC LL Sbjct: 1042 HFVHCFLPVAEGWAGE-PRSASSRRVSSSSELDLP--SGDHCEAGLL 1085
>ZN507_HUMAN (Q8TCN5) Zinc finger protein 507| Length = 849 Score = 28.1 bits (61), Expect = 5.4 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 120 PSGRHCIALICCCSLGF 70 PS +C+ L CCC GF Sbjct: 798 PSMEYCVLLFCCCICGF 814
>KPRS_PROMM (Q7V6S2) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 332 Score = 28.1 bits (61), Expect = 5.4 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +2 Query: 5 AVQXHXESNKKD-RRLILQSTTRNPRLQQQISAMQ*RPDGPITRRRDAHALLQLVLR 172 A + ES D +RL L S T NP L ++I+A PDGP +R A L + ++ Sbjct: 7 AARTEQESISYDMQRLRLFSGTSNPALAREIAAYLGVPDGPRICKRFADGELYVQIQ 63
>YL041_MIMIV (Q5UPC0) Hypothetical protein L41| Length = 478 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = +2 Query: 26 SNKKDRRLILQSTTRNPRLQQQISAMQ*RPDGPITRRRDAHALLQLVLR 172 S++K RL L+ +R+P ++ S ++ R P+ R H +L+LR Sbjct: 161 SSRKRSRLPLRERSRSPSRERSRSPLRERYRSPLRERSRLHLREKLILR 209
>CH601_MYCTU (P0A518) 60 kDa chaperonin 1 (Protein Cpn60-1) (groEL protein 1)| Length = 539 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 157 SVGPAGVHCAIERALGDSSELNAGVCKKANVKIED 261 ++GP G H + +A G + N GV +++ED Sbjct: 29 TLGPRGRHVVLAKAFGGPTVTNDGVTVAREIELED 63
>CH601_MYCBO (P0A519) 60 kDa chaperonin 1 (Protein Cpn60-1) (groEL protein 1)| Length = 539 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 157 SVGPAGVHCAIERALGDSSELNAGVCKKANVKIED 261 ++GP G H + +A G + N GV +++ED Sbjct: 29 TLGPRGRHVVLAKAFGGPTVTNDGVTVAREIELED 63
>CHST7_MOUSE (Q9EP78) Carbohydrate sulfotransferase 7 (EC 2.8.2.17) (EC 2.8.2.-)| (Chondroitin 6-sulfotransferase 2) (C6ST-2) (mC6ST-2) (N-acetylglucosamine 6-O-sulfotransferase 1) (GlcNAc6ST-4) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfot Length = 484 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 262 GPQFLRLLFYKHPHLAHCCLPMPSLWRNEHPQD 164 G FL LF +HP + + PM LW+ +P D Sbjct: 111 GSSFLGELFNQHPDVFYLYEPMWHLWQALYPGD 143
>CHST7_HUMAN (Q9NS84) Carbohydrate sulfotransferase 7 (EC 2.8.2.17) (EC 2.8.2.-)| (Chondroitin 6-sulfotransferase 2) (C6ST-2) (N-acetylglucosamine 6-O-sulfotransferase 1) (GlcNAc6ST-4) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase Length = 486 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 262 GPQFLRLLFYKHPHLAHCCLPMPSLWRNEHPQD 164 G FL LF +HP + + PM LW+ +P D Sbjct: 113 GSSFLGELFNQHPDVFYLYEPMWHLWQALYPGD 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,781,348 Number of Sequences: 219361 Number of extensions: 809553 Number of successful extensions: 2285 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2285 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)