>YHS1_YEAST (P38828) Hypothetical 21.3 kDa protein in MSH1-EPT1 intergenic|
           region
          Length = 187

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -2

Query: 589 GVGVTPEAQRLFDALSKTL-PVHWDKTDIVVMKEVRVCSPYLPENVSGGTSAANERV 422
           G GV+ E Q +FD + KT+    W   DI+++ +V+V  PY  E++      +N+ +
Sbjct: 108 GKGVSAEGQFIFDQIFKTIGDTKWVAKDIIILDDVKVQPPYKVEDIKVLHEGSNQSI 164

>MATK_VACVI (Q8WIJ9) Maturase K (Intron maturase)|
          Length = 502

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 362 LELARYTHMLSFPLKVQHFLNPFISS*CSAADIFRQVGTAYTNLLHYNNVGLVPMNWKRL 541
           L  A++ ++L  P+      N  +    S +DI  ++G  Y NL HY +  L  MN  R+
Sbjct: 372 LSKAKFCNVLGHPM------NKXVWDGLSDSDIIERIGRLYXNLSHYYSGSLKKMNLXRI 425

>YMG6_YEAST (Q04658) Hypothetical 40.9 kDa protein in DAK1-ORC1 intergenic|
           region
          Length = 369

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 496 KEVRVCSPYLPENVSGGTSAANERVKKVLDFER 398
           K +R+C+P     V GG+S ANE +  V +F R
Sbjct: 34  KGLRLCAPQFTITVIGGSSTANEFIASVREFLR 66

>PTSS1_MOUSE (Q99LH2) Phosphatidylserine synthase 1 (EC 2.7.8.-) (PtdSer|
           synthase 1) (PSS-1) (Serine-exchange enzyme I)
          Length = 473

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -3

Query: 345 IFHLNSCCDLFLNPTLFIQFRQLNLLKICFSMLFSQTTTPASLLILCVRCHMWWW*IIAA 166
           +F L+    LFL   LF+ F Q+  L           T  A ++   V CH+  W  I +
Sbjct: 104 VFGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATREADIMEYAVNCHVITWERIVS 163

Query: 165 H 163
           H
Sbjct: 164 H 164

>PTSS1_CRIGR (Q00576) Phosphatidylserine synthase 1 (EC 2.7.8.-) (PtdSer|
           synthase 1) (PSS-1) (Serine-exchange enzyme I)
          Length = 471

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -3

Query: 345 IFHLNSCCDLFLNPTLFIQFRQLNLLKICFSMLFSQTTTPASLLILCVRCHMWWW*IIAA 166
           +F L+    LFL   LF+ F Q+  L           T  A ++   V CH+  W  I +
Sbjct: 104 VFGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATREADIMEYAVNCHVITWERIVS 163

Query: 165 H 163
           H
Sbjct: 164 H 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,854,735
Number of Sequences: 219361
Number of extensions: 1558881
Number of successful extensions: 3647
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3646
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)