Clone Name	rbags18g20
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF265294.1|AF265294 Triticum aestivum violaxanthin de-epoxida...	702	0.0
2	gb|AY672650.1| Hordeum vulgare violaxanthin de-epoxidase (VDE) m...	178	1e-41
3	gb|AF288196.3|AF288196 Oryza sativa subsp. indica violaxanthin d...	139	1e-29
4	ref|XM_472224.1| Oryza sativa (japonica cultivar-group), predic...	131	3e-27
5	emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4,...	131	3e-27
6	emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4,...	131	3e-27
7	gb|AF468689.1| Oryza sativa subsp. japonica violaxanthin de-epox...	131	3e-27
8	gb|AF411133.1|AF411133 Oryza sativa subsp. japonica violaxanthin...	131	3e-27
9	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	131	3e-27
10	dbj|AK061554.1| Oryza sativa (japonica cultivar-group) cDNA clon...	131	3e-27
11	gb|AC133491.35| Rattus norvegicus clone rp32-252i5, complete seq...	44	0.51
12	gb|AC018763.6| Homo sapiens chromosome 5 clone CTD-2305C23, comp...	44	0.51
13	gb|AC026753.5|AC026753 Homo sapiens chromosome 5 clone RP11-72L1...	44	0.51
14	ref|XM_881617.1| PREDICTED: Bos taurus similar to AMP deaminase ...	42	2.0
15	ref|XM_881604.1| PREDICTED: Bos taurus similar to AMP deaminase ...	42	2.0
16	ref|XM_591992.2| PREDICTED: Bos taurus similar to AMP deaminase ...	42	2.0
17	ref|XM_881578.1| PREDICTED: Bos taurus similar to AMP deaminase ...	42	2.0
18	ref|XM_868340.1| PREDICTED: Bos taurus similar to AMP deaminase ...	42	2.0
19	gb|AC123033.4| Mus musculus BAC clone RP24-482F14 from chromosom...	42	2.0
20	ref|XM_847506.1| PREDICTED: Canis familiaris similar to adenosin...	42	2.0
21	emb|AL603749.6| Human DNA sequence from clone RP11-133N1 on chro...	42	2.0
22	emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on ch...	42	2.0
23	dbj|AK114941.1| Ciona intestinalis cDNA, clone:cieg023m03, full ...	42	2.0
24	gb|BC107562.1| Rattus norvegicus calcium/calmodulin-dependent pr...	40	8.0
25	ref|NM_012519.1| Rattus norvegicus calcium/calmodulin-dependent ...	40	8.0
26	gb|DQ213430.1| Taeniopygia guttata clone 0058P0059E07 tetratrico...	40	8.0
27	gb|DQ213429.1| Taeniopygia guttata clone 0058P0001G10 tetratrico...	40	8.0
28	ref|NG_002392.2| Homo sapiens major histocompatibility complex, ...	40	8.0
29	gb|AY663415.1| Homo sapiens voucher Coriell Cell Repository DNA ...	40	8.0
30	gb|AY663413.1| Homo sapiens voucher Coriell Cell Repository DNA ...	40	8.0
31	gb|AY663408.1| Homo sapiens voucher Coriell Cell Repository DNA ...	40	8.0
32	gb|AY663407.1| Homo sapiens voucher Coriell Cell Repository DNA ...	40	8.0
33	gb|AY663405.1| Homo sapiens voucher Coriell Cell Repository DNA ...	40	8.0
34	gb|AY663399.1| Homo sapiens voucher Coriell Cell Repository DNA ...	40	8.0
35	emb|AL954219.1| Pan troglodytes chromosome 22 clone PTB-302M06 m...	40	8.0
36	emb|Z81033.1|CEC03C11 Caenorhabditis elegans Cosmid C03C11, comp...	40	8.0
37	gb|AC129192.4| Mus musculus BAC clone RP24-113B19 from chromosom...	40	8.0
38	ref|XM_724701.1| Plasmodium yoelii yoelii str. 17XNL hypothetica...	40	8.0
39	gb|U41012.1| Caenorhabditis elegans cosmid C06A6, complete sequence	40	8.0
40	emb|Z84489.1|HS93N13 Human DNA sequence from clone RP1-93N13 on ...	40	8.0
41	emb|AL929581.5| Human DNA sequence from clone DAQB-97F8 on chrom...	40	8.0
42	emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on ch...	40	8.0
43	gb|AC137971.4| Mus musculus, clone RP23-135B1, complete sequence	40	8.0
44	emb|AL049740.2|HSJ269L11 Human DNA sequence from clone RP1-269L1...	40	8.0
45	emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in...	40	8.0
46	emb|BX649467.5| Zebrafish DNA sequence from clone CH211-117L16 i...	40	8.0
47	gb|AC020633.3| Homo sapiens 3 BAC RP11-65E22 (Roswell Park Cance...	40	8.0
48	gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, comp...	40	8.0
49	gb|U84215.1|NHU84215 Nectria haematococca cytoplasmic dynein hea...	40	8.0
50	dbj|AB071869.1| Mesocricetus auratus CNX mRNA for calnexin, comp...	40	8.0
51	dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, sectio...	40	8.0
52	emb|AL929006.3| Zebrafish DNA sequence from clone CH211-198G19 i...	40	8.0
53	emb|AL929471.16| Mouse DNA sequence from clone RP23-289F24 on ch...	40	8.0
54	gb|AC116954.4| Mus musculus BAC clone RP23-387L22 from 1, comple...	40	8.0
55	gb|J05072.1|RATCAMKI Rat calmodulin-dependent protein kinase II-...	40	8.0
56	emb|X74961.1|HSACPP1 H.sapiens ACPP gene for prostatic acid phos...	40	8.0
57	dbj|AP001037.1| Homo sapiens genomic DNA, chromosome 21, clone:K...	40	8.0

---

>gb|AF265294.1|AF265294 Triticum aestivum violaxanthin de-epoxidase (WVDE) mRNA, complete cds
          Length = 1746

 Score =  702 bits (354), Expect = 0.0
 Identities = 402/417 (96%), Gaps = 2/417 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gttgtatacgtttatatacctcctttggacaaaaaatttacatacttactgatgctttac 60
            ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 1676 gttgtatacatttatatacctcctttggacaaaa--tttacatacttactgatgctttac 1619

                                                                        
Query: 61   acataagctaatctgggaacatgttgcgccagtgggtaaaacattatcagattcaaaatt 120
            |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1618 acataagctaatctgggaacgtgttgtgccagtgggtaaaacattatcagattcaaaatt 1559

                                                                        
Query: 121  ttgatttctattgaacaatccgttactgtaggtattgcctcgacgattagaatctacttt 180
            ||||||||| ||| | |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1558 ttgatttctgttggagaatctgttactgtaggtattgcctcgacaattagaatctacttt 1499

                                                                        
Query: 181  gctcaccactggatggcaccctgttctgtaatcctccttgcataggcagaagtggctgct 240
            |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 1498 gctcaccactggatggcaccctgttctgcaatcctccttgcataggcaggagtggctgct 1439

                                                                        
Query: 241  gggggtaactatcttagcttccttatcggcagggagcggctgaagagctcctcgacctcg 300
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 gggggtagctatcttagcttccttatcggcagggagcggctgaagagctcctcgacctcg 1379

                                                                        
Query: 301  gtcgcctccaagttcagctgatccaagatttccatctcctctttgctcaaaccctgaaag 360
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1378 gtcgcctccaagttcagctgatccaaaatttccatctcctctttgctcaaaccctgaaag 1319

                                                                     
Query: 361  aagttcatcacatcctgtttgacctccatgatgccatctgccaacctcttaaccagt 417
            |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1318 aagttcatcacatcctgtttgacctccatgatgccatccgccaacctcttaaccagt 1262



 Score =  210 bits (106), Expect = 4e-51
 Identities = 112/114 (98%)
 Strand = Plus / Minus

                                                                        
Query: 476  ttacctcatcaacgatgagcttctcccctttctcaacagtcctctcgattctatccgcaa 535
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1203 ttacctcatcaacgatgagcttctcccctttttcaacagtcctctcgattctatcggcaa 1144

                                                                  
Query: 536  gaggaggctcagcaccacaggtgttgtctgtcctgataaatgtggagaagtccc 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 gaggaggctcagcaccacaggtgttgtctgtcctgataaatgtggagaagtccc 1090

---

>gb|AY672650.1| Hordeum vulgare violaxanthin de-epoxidase (VDE) mRNA, partial cds
          Length = 639

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 476 ttacctcatcaacgatgagcttctcccctttctcaacagtcctctcgattctatccgcaa 535
           ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 503 ttacctcatcagcgatgagcttctcccctttttcaacagtcctctcgattctatcggcaa 444

                                                                 
Query: 536 gaggaggctcagcaccacaggtgttgtctgtcctgataaatgtggagaagtccc 589
           |||||||||||||||||||||||||| ||||||||||||||| | |||||||||
Sbjct: 443 gaggaggctcagcaccacaggtgttgactgtcctgataaatgagcagaagtccc 390



 Score =  159 bits (80), Expect = 1e-35
 Identities = 83/84 (98%)
 Strand = Plus / Minus

                                                                       
Query: 334 atctcctctttgctcaaaccctgaaagaagttcatcacatcctgtttgacctccatgatg 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 atctcctctttgctcaaaccctgaaagaagttcatcacatcctgtttgacctccatgatg 580

                                   
Query: 394 ccatctgccaacctcttaaccagt 417
           ||||| ||||||||||||||||||
Sbjct: 579 ccatccgccaacctcttaaccagt 556

---

>gb|AF288196.3|AF288196 Oryza sativa subsp. indica violaxanthin de-epoxidase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1647

 Score =  139 bits (70), Expect = 1e-29
 Identities = 136/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 253  cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
            ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 1340 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 1281

                                                                        
Query: 313  ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
            |||| ||||||||| |  ||||||||||| |||||||  |||||||||||||||||||  
Sbjct: 1280 ttcatctgatccaaaagctccatctcctccttgctcaggccctgaaagaagttcatcaag 1221

                                                  
Query: 373  tcctgtttgacctccatgatgccatctgccaacctctt 410
            |||||||| |||||||||| |||||||| |||||||||
Sbjct: 1220 tcctgtttcacctccatgaggccatctgtcaacctctt 1183



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 495  cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
            |||||| |||| ||| || ||| |||| ||||| ||| | ||||| ||||| | ||| ||
Sbjct: 1098 cttctctccttgctcgacggtcttctctattctctccacgagaggtggctcgggaccgca 1039

                                             
Query: 555  ggtgttgtctgtcctgataaatgtggagaagtc 587
            ||||||||| |||||||| || |||||||||||
Sbjct: 1038 ggtgttgtcggtcctgatgaacgtggagaagtc 1006



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 38   ttacatacttactgatgctttaca 61
            ||||||| ||||||||||||||||
Sbjct: 1534 ttacataattactgatgctttaca 1511

---

>ref|XM_472224.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1380

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
            ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 1376 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 1317

                                                                        
Query: 313  ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
            |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 1316 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 1257

                                                  
Query: 373  tcctgtttgacctccatgatgccatctgccaacctctt 410
            |||||||| |||||||||| |||||||| |||||||||
Sbjct: 1256 tcctgtttcacctccatgaggccatctgtcaacctctt 1219



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 495  cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
            |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 1134 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 1075

                                             
Query: 555  ggtgttgtctgtcctgataaatgtggagaagtc 587
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1074 ggtgttgtcggttctgatgaatgtggagaagtc 1042

---

>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01,
              complete sequence
          Length = 148353

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Plus

                                                                          
Query: 253    cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
              ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 143128 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 143187

                                                                          
Query: 313    ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
              |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 143188 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 143247

                                                    
Query: 373    tcctgtttgacctccatgatgccatctgccaacctctt 410
              |||||||| |||||||||| |||||||| |||||||||
Sbjct: 143248 tcctgtttcacctccatgaggccatctgtcaacctctt 143285



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                          
Query: 495    cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
              |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 143370 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 143429

                                               
Query: 555    ggtgttgtctgtcctgataaatgtggagaagtc 587
              ||||||||| || ||||| ||||||||||||||
Sbjct: 143430 ggtgttgtcggttctgatgaatgtggagaagtc 143462

---

>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03,
             complete sequence
          Length = 130910

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Plus

                                                                         
Query: 253   cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
             ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 30367 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 30426

                                                                         
Query: 313   ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
             |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 30427 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 30486

                                                   
Query: 373   tcctgtttgacctccatgatgccatctgccaacctctt 410
             |||||||| |||||||||| |||||||| |||||||||
Sbjct: 30487 tcctgtttcacctccatgaggccatctgtcaacctctt 30524



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                         
Query: 495   cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
             |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 30609 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 30668

                                              
Query: 555   ggtgttgtctgtcctgataaatgtggagaagtc 587
             ||||||||| || ||||| ||||||||||||||
Sbjct: 30669 ggtgttgtcggttctgatgaatgtggagaagtc 30701

---

>gb|AF468689.1| Oryza sativa subsp. japonica violaxanthin de-epoxidase (RVDE1) gene,
            complete cds
          Length = 1940

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
            ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 1925 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 1866

                                                                        
Query: 313  ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
            |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 1865 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 1806

                                                  
Query: 373  tcctgtttgacctccatgatgccatctgccaacctctt 410
            |||||||| |||||||||| |||||||| |||||||||
Sbjct: 1805 tcctgtttcacctccatgaggccatctgtcaacctctt 1768



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 495  cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
            |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 1683 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 1624

                                             
Query: 555  ggtgttgtctgtcctgataaatgtggagaagtc 587
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1623 ggtgttgtcggttctgatgaatgtggagaagtc 1591

---

>gb|AF411133.1|AF411133 Oryza sativa subsp. japonica violaxanthin de-epoxidase precursor
            (RVDE1) mRNA, complete cds
          Length = 1887

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
            ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 1511 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 1452

                                                                        
Query: 313  ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
            |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 1451 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 1392

                                                  
Query: 373  tcctgtttgacctccatgatgccatctgccaacctctt 410
            |||||||| |||||||||| |||||||| |||||||||
Sbjct: 1391 tcctgtttcacctccatgaggccatctgtcaacctctt 1354



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 495  cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
            |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 1269 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 1210

                                             
Query: 555  ggtgttgtctgtcctgataaatgtggagaagtc 587
            ||||||||| || ||||| ||||||||||||||
Sbjct: 1209 ggtgttgtcggttctgatgaatgtggagaagtc 1177

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Plus

                                                                            
Query: 253      cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
                ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 18562501 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 18562560

                                                                            
Query: 313      ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
                |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 18562561 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 18562620

                                                      
Query: 373      tcctgtttgacctccatgatgccatctgccaacctctt 410
                |||||||| |||||||||| |||||||| |||||||||
Sbjct: 18562621 tcctgtttcacctccatgaggccatctgtcaacctctt 18562658



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                            
Query: 495      cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
                |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 18562743 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 18562802

                                                 
Query: 555      ggtgttgtctgtcctgataaatgtggagaagtc 587
                ||||||||| || ||||| ||||||||||||||
Sbjct: 18562803 ggtgttgtcggttctgatgaatgtggagaagtc 18562835

---

>dbj|AK061554.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B12, full
           insert sequence
          Length = 955

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                       
Query: 253 cttagcttccttatcggcagggagcggctgaagagctcctcgacctcggtcgcctccaag 312
           ||||| |||||||| ||||||| ||||||||||| || ||| ||||| || || |||| |
Sbjct: 728 cttagtttccttattggcagggcgcggctgaagaccttctcaacctcagttgcttccatg 669

                                                                       
Query: 313 ttcagctgatccaagatttccatctcctctttgctcaaaccctgaaagaagttcatcaca 372
           |||| ||||||||| |  ||||||||||| ||||| |  |||||||||||||||||||  
Sbjct: 668 ttcatctgatccaaaagctccatctcctccttgcttagcccctgaaagaagttcatcaag 609

                                                 
Query: 373 tcctgtttgacctccatgatgccatctgccaacctctt 410
           |||||||| |||||||||| |||||||| |||||||||
Sbjct: 608 tcctgtttcacctccatgaggccatctgtcaacctctt 571



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 495 cttctcccctttctcaacagtcctctcgattctatccgcaagaggaggctcagcaccaca 554
           |||||| |||| ||| || ||| |||| ||||| ||| ||||||| ||||||| ||| ||
Sbjct: 486 cttctctccttgctcgacggtcttctctattctctccacaagaggtggctcaggaccgca 427

                                            
Query: 555 ggtgttgtctgtcctgataaatgtggagaagtc 587
           ||||||||| || ||||| ||||||||||||||
Sbjct: 426 ggtgttgtcggttctgatgaatgtggagaagtc 394

---

>gb|AC133491.35| Rattus norvegicus clone rp32-252i5, complete sequence
          Length = 150430

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 334   atctcctctttgctcaaaccct 355
             ||||||||||||||||||||||
Sbjct: 29161 atctcctctttgctcaaaccct 29182

---

>gb|AC018763.6| Homo sapiens chromosome 5 clone CTD-2305C23, complete sequence
          Length = 119974

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    caaaattttgatttctattgaa 135
              ||||||||||||||||||||||
Sbjct: 105770 caaaattttgatttctattgaa 105749

---

>gb|AC026753.5|AC026753 Homo sapiens chromosome 5 clone RP11-72L14, complete sequence
          Length = 148491

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 114    caaaattttgatttctattgaa 135
              ||||||||||||||||||||||
Sbjct: 148373 caaaattttgatttctattgaa 148394

---

>ref|XM_881617.1| PREDICTED: Bos taurus similar to AMP deaminase 2 (AMP deaminase
           isoform L), transcript variant 6 (LOC514185), mRNA
          Length = 3254

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 cagggagcggctgaagagctcctcg 294
           ||||||||||||||| |||||||||
Sbjct: 164 cagggagcggctgaacagctcctcg 140

---

>ref|XM_881604.1| PREDICTED: Bos taurus similar to AMP deaminase 2 (AMP deaminase
           isoform L), transcript variant 5 (LOC514185), mRNA
          Length = 3599

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 cagggagcggctgaagagctcctcg 294
           ||||||||||||||| |||||||||
Sbjct: 509 cagggagcggctgaacagctcctcg 485

---

>ref|XM_591992.2| PREDICTED: Bos taurus similar to AMP deaminase 2 (AMP deaminase
           isoform L), transcript variant 1 (LOC514185), mRNA
          Length = 3526

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 cagggagcggctgaagagctcctcg 294
           ||||||||||||||| |||||||||
Sbjct: 340 cagggagcggctgaacagctcctcg 316

---

>ref|XM_881578.1| PREDICTED: Bos taurus similar to AMP deaminase 2 (AMP deaminase
           isoform L), transcript variant 4 (LOC514185), mRNA
          Length = 3319

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 cagggagcggctgaagagctcctcg 294
           ||||||||||||||| |||||||||
Sbjct: 340 cagggagcggctgaacagctcctcg 316

---

>ref|XM_868340.1| PREDICTED: Bos taurus similar to AMP deaminase 2 (AMP deaminase
           isoform L), transcript variant 2 (LOC514185), mRNA
          Length = 3430

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 cagggagcggctgaagagctcctcg 294
           ||||||||||||||| |||||||||
Sbjct: 340 cagggagcggctgaacagctcctcg 316

---

>gb|AC123033.4| Mus musculus BAC clone RP24-482F14 from chromosome 5, complete sequence
          Length = 180745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 227    cagaagtggctgctgggggta 247
              |||||||||||||||||||||
Sbjct: 130372 cagaagtggctgctgggggta 130392

---

>ref|XM_847506.1| PREDICTED: Canis familiaris similar to adenosine monophosphate
           deaminase 2 (isoform L) isoform 2, transcript variant 2
           (LOC479913), mRNA
          Length = 3580

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 cagggagcggctgaagagctcctcg 294
           ||||||||||||||| |||||||||
Sbjct: 545 cagggagcggctgaacagctcctcg 521

---

>emb|AL603749.6| Human DNA sequence from clone RP11-133N1 on chromosome 1 Contains two
             novel proteins similar to preferentially expressed antigen
             in melanoma (PRAME) and the 3' end of a novel leucine rich
             repeat domain containing protein, complete sequence
          Length = 102313

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 391   atgccatctgccaacctctta 411
             |||||||||||||||||||||
Sbjct: 55230 atgccatctgccaacctctta 55210

---

>emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on chromosome 1 Contains six
             novel genes similar to preferentially expressed antigen in
             melanoma (PRAME), two novel genes, two preferentially
             expressed antigen in melanoma (PRAME) pseudogenes and a
             CpG island, complete sequence
          Length = 184591

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 391   atgccatctgccaacctctta 411
             |||||||||||||||||||||
Sbjct: 13151 atgccatctgccaacctctta 13171

---

>dbj|AK114941.1| Ciona intestinalis cDNA, clone:cieg023m03, full insert sequence
          Length = 2157

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 342 tttgctcaaaccctgaaagaagttc 366
           ||||||||| |||||||||||||||
Sbjct: 807 tttgctcaagccctgaaagaagttc 831

---

>gb|BC107562.1| Rattus norvegicus calcium/calmodulin-dependent protein kinase II,
            delta, mRNA (cDNA clone MGC:124639 IMAGE:7939424),
            complete cds
          Length = 3774

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  ctccaagttcagctgatcca 325
            ||||||||||||||||||||
Sbjct: 1891 ctccaagttcagctgatcca 1910

---

>ref|NM_012519.1| Rattus norvegicus calcium/calmodulin-dependent protein kinase II,
            delta (Camk2d), mRNA
          Length = 5637

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  ctccaagttcagctgatcca 325
            ||||||||||||||||||||
Sbjct: 2131 ctccaagttcagctgatcca 2150

---

>gb|DQ213430.1| Taeniopygia guttata clone 0058P0059E07 tetratricopeptide repeat
           domain 1 protein-like mRNA, complete sequence
          Length = 740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 agcggctgaagagctcctcg 294
           ||||||||||||||||||||
Sbjct: 105 agcggctgaagagctcctcg 86

---

>gb|DQ213429.1| Taeniopygia guttata clone 0058P0001G10 tetratricopeptide repeat
           domain 1 protein-like mRNA, complete sequence
          Length = 746

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 agcggctgaagagctcctcg 294
           ||||||||||||||||||||
Sbjct: 112 agcggctgaagagctcctcg 93

---

>ref|NG_002392.2| Homo sapiens major histocompatibility complex, class II, DR52 haplotype
              (DR52) on chromosome 6
          Length = 139182

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tgatttctattgaacaatcc 141
              ||||||||||||||||||||
Sbjct: 117617 tgatttctattgaacaatcc 117636

---

>gb|AY663415.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC class
              II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1)
              gene, HLA-DQA1-DQA1*0103 allele, and MHC class II antigen
              (HLA-DRB1) gene, complete cds
          Length = 100761

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tgatttctattgaacaatcc 141
              ||||||||||||||||||||
Sbjct: 100393 tgatttctattgaacaatcc 100374

---

>gb|AY663413.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC class
              II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1)
              gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen
              (HLA-DRB1) gene, complete cds
          Length = 117527

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tgatttctattgaacaatcc 141
              ||||||||||||||||||||
Sbjct: 117155 tgatttctattgaacaatcc 117136

---

>gb|AY663408.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC
             class II antigen (HLA-DQB1) gene, MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC
             class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*140501
             allele, complete cds
          Length = 100515

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgatttctattgaacaatcc 141
             ||||||||||||||||||||
Sbjct: 95319 tgatttctattgaacaatcc 95300

---

>gb|AY663407.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC class
              II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*020101 allele,
              MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*050101
              allele, and MHC class II antigen (HLA-DRB1) gene,
              HLA-DRB1-DRB1*030101 allele, complete cds
          Length = 106318

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tgatttctattgaacaatcc 141
              ||||||||||||||||||||
Sbjct: 101768 tgatttctattgaacaatcc 101749

---

>gb|AY663405.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC
             class II antigen (HLA-DQB1) gene, MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC
             class II antigen (HLA-DRB1) gene, complete cds
          Length = 116082

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgatttctattgaacaatcc 141
             ||||||||||||||||||||
Sbjct: 97663 tgatttctattgaacaatcc 97644

---

>gb|AY663399.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*020101
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*050101 allele, and MHC class II antigen
             (HLA-DRB1) gene, HLA-DRB1-DRB1*030101 allele, complete cds
          Length = 105464

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgatttctattgaacaatcc 141
             ||||||||||||||||||||
Sbjct: 95083 tgatttctattgaacaatcc 95064

---

>emb|AL954219.1| Pan troglodytes chromosome 22 clone PTB-302M06 map q21.2, complete
             sequence
          Length = 128963

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaaattttgatttctattga 134
             ||||||||||||||||||||
Sbjct: 76281 aaaattttgatttctattga 76262

---

>emb|Z81033.1|CEC03C11 Caenorhabditis elegans Cosmid C03C11, complete sequence
          Length = 19170

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  gatgagcttctcccctttct 508
            ||||||||||||||||||||
Sbjct: 8118 gatgagcttctcccctttct 8099

---

>gb|AC129192.4| Mus musculus BAC clone RP24-113B19 from chromosome 5, complete sequence
          Length = 170410

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ttttgatttctattgaacaa 138
             ||||||||||||||||||||
Sbjct: 17552 ttttgatttctattgaacaa 17571

---

>ref|XM_724701.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01954)
           partial mRNA
          Length = 4887

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 ttatcagattcaaaattttgattt 127
           |||||| |||||||||||||||||
Sbjct: 707 ttatcaaattcaaaattttgattt 684

---

>gb|U41012.1| Caenorhabditis elegans cosmid C06A6, complete sequence
          Length = 28409

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   attcaaaattttgatttcta 130
             ||||||||||||||||||||
Sbjct: 15352 attcaaaattttgatttcta 15333

---

>emb|Z84489.1|HS93N13 Human DNA sequence from clone RP1-93N13 on chromosome 6p21 Contains the
             HLA-DRB1*03011 and HLA-DQA1*05011 genes for major
             histocompatibility complex class II DR beta 1 and DQ alpha
             1, a CpG island, ESTs, STSs and GSSs, complete sequence
          Length = 86896

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgatttctattgaacaatcc 141
             ||||||||||||||||||||
Sbjct: 81565 tgatttctattgaacaatcc 81546

---

>emb|AL929581.5| Human DNA sequence from clone DAQB-97F8 on chromosome 6 Contains the 5'
             end of the HLA-DRB9 pseudogene for major
             histocompatibility complex, class II, DR beta 9, the
             HLA-DRB3 gene for major histocompatibility complex, class
             II DR beta 3, the HLA-DRB2 pseudogene for major
             histocompatibility complex, class II, DR beta 2, the
             HLA-DRB1 gene for major histocompatibility complex, class
             II, DR beta 1and one CpG island, complete sequence
          Length = 118771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tgatttctattgaacaatcc 141
             ||||||||||||||||||||
Sbjct: 80081 tgatttctattgaacaatcc 80100

---

>emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on chromosome 6 contains the
             HLA-DRB3 gene for major histocompatibility complex, class
             II, DR beta 3, a major histocompatibility complex, class
             II, DR beta pseudogene, the HLA-DRB1 gene for major
             histocompatibility complex, class II, DR beta 1 and one
             CpG island, complete sequence
          Length = 130819

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tgatttctattgaacaatcc 141
             ||||||||||||||||||||
Sbjct: 69468 tgatttctattgaacaatcc 69487

---

>gb|AC137971.4| Mus musculus, clone RP23-135B1, complete sequence
          Length = 224801

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ttttgatttctattgaacaa 138
             ||||||||||||||||||||
Sbjct: 47803 ttttgatttctattgaacaa 47822

---

>emb|AL049740.2|HSJ269L11 Human DNA sequence from clone RP1-269L11 on chromosome 6 Contains a
            major histocompatibility complex class II DR beta
            (HLA-DRB) pseudogene, ESTs, STSs and GSSs, complete
            sequence
          Length = 24020

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  tgatttctattgaacaatcc 141
            ||||||||||||||||||||
Sbjct: 5767 tgatttctattgaacaatcc 5748

---

>emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in linkage group 19,
             complete sequence
          Length = 138519

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    agctaatctgggaacatgtt 85
             ||||||||||||||||||||
Sbjct: 81251 agctaatctgggaacatgtt 81270

---

>emb|BX649467.5| Zebrafish DNA sequence from clone CH211-117L16 in linkage group 4
             Contains the gene for a novel protein similar to
             vertebrate mitochondrial ribosomal protein S18A (MRPS18A)
             and two novel genes, complete sequence
          Length = 74769

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   aacattatcagattcaaaat 119
             ||||||||||||||||||||
Sbjct: 67213 aacattatcagattcaaaat 67194

---

>gb|AC020633.3| Homo sapiens 3 BAC RP11-65E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148244

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    caagttcagctgatccaaga 328
              ||||||||||||||||||||
Sbjct: 125341 caagttcagctgatccaaga 125322

---

>gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, complete sequence
          Length = 171234

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   tatcagattcaaaattttga 124
             ||||||||||||||||||||
Sbjct: 89320 tatcagattcaaaattttga 89339

---

>gb|U84215.1|NHU84215 Nectria haematococca cytoplasmic dynein heavy chain (DHC1) gene,
            complete cds
          Length = 13157

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  ctccaagttcagctgatcca 325
            ||||||||||||||||||||
Sbjct: 2893 ctccaagttcagctgatcca 2874

---

>dbj|AB071869.1| Mesocricetus auratus CNX mRNA for calnexin, complete cds
          Length = 1782

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 gtcctgataaatgtggagaa 584
           ||||||||||||||||||||
Sbjct: 572 gtcctgataaatgtggagaa 591

---

>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaaattttgatttctattga 134
             ||||||||||||||||||||
Sbjct: 38335 aaaattttgatttctattga 38316

---

>emb|AL929006.3| Zebrafish DNA sequence from clone CH211-198G19 in linkage group 18,
             complete sequence
          Length = 193154

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    agctaatctgggaacatgtt 85
             ||||||||||||||||||||
Sbjct: 65522 agctaatctgggaacatgtt 65541

---

>emb|AL929471.16| Mouse DNA sequence from clone RP23-289F24 on chromosome 4, complete
             sequence
          Length = 146547

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   tcatcaacgatgagcttctc 500
             ||||||||||||||||||||
Sbjct: 25552 tcatcaacgatgagcttctc 25533

---

>gb|AC116954.4| Mus musculus BAC clone RP23-387L22 from 1, complete sequence
          Length = 191002

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   aagatttccatctcctcttt 344
             ||||||||||||||||||||
Sbjct: 80637 aagatttccatctcctcttt 80618

---

>gb|J05072.1|RATCAMKI Rat calmodulin-dependent protein kinase II-delta, complete cds
          Length = 5637

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  ctccaagttcagctgatcca 325
            ||||||||||||||||||||
Sbjct: 2131 ctccaagttcagctgatcca 2150

---

>emb|X74961.1|HSACPP1 H.sapiens ACPP gene for prostatic acid phosphatase, exon 1
          Length = 10241

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  caagttcagctgatccaaga 328
            ||||||||||||||||||||
Sbjct: 6980 caagttcagctgatccaaga 6999

---

>dbj|AP001037.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2042G5, ERG-ETS2
             region, complete sequence
          Length = 165644

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaaattttgatttctattga 134
             ||||||||||||||||||||
Sbjct: 25216 aaaattttgatttctattga 25197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,849,368
Number of Sequences: 3902068
Number of extensions: 4849368
Number of successful extensions: 98312
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98177
Number of HSP's gapped (non-prelim): 134
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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