ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18g16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018879.1| Zea mays clone EL01T0203E01.d mRNA sequence Length = 2108 Score = 460 bits (232), Expect = e-126 Identities = 424/488 (86%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||| ||||||| || |||||||||||| ||||||||||| | |||||||||||| ||| Sbjct: 1940 aatcctcaattaacaggaaccttcctgttgggctcaaagacgtacttgatcaaagaatcc 1881 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||| |||| ||||||||| | |||||| || |||| |||||| ||||||||| Sbjct: 1880 ttgatggacagcagctgagggaactcggccttcagtttcgacgtgtccatctcgttgttg 1821 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||| || || ||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1820 cttctaggcgcgactatcaccttggcctgttcttcgagtgtgaaattggtccacttgaaa 1761 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || || |||||||||| |||||||||||| ||||||||||| || || ||| | |||||| Sbjct: 1760 tcaggattgatgtatttcttgtacatctctagaatctcgttgtggcttacagcgccaggg 1701 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || ||||| || |||||||| | |||||||||| Sbjct: 1700 ttggtgaagttccatatgcccctgcagtcccgtttcgccatctcaatggagataggcaga 1641 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| || |||||||| ||||| |||||||||||||||||||| || || ||||| Sbjct: 1640 agctcatccaagattgtcatgctgttgggaatgttcaccaccttgtcgtaacgagctatc 1581 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||||| Sbjct: 1580 tttgtgatgaagttacgagggttgcttagatctgatgatataggcatcctgaccctaaga 1521 Query: 654 gtacagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaa 713 ||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||| Sbjct: 1520 gtacagacattatcatactccttcaatagctcttccaccattgctttagttttggaataa 1461 Query: 714 aatgaacc 721 || ||||| Sbjct: 1460 aaggaacc 1453
>gb|BT018012.1| Zea mays clone EL01N0528B06.c mRNA sequence Length = 1008 Score = 460 bits (232), Expect = e-126 Identities = 424/488 (86%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||| ||||||| || |||||||||||| ||||||||||| | |||||||||||| ||| Sbjct: 626 aatcctcaattaacaggaaccttcctgttgggctcaaagacgtacttgatcaaagaatcc 567 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||| |||| ||||||||| | |||||| || |||| |||||| ||||||||| Sbjct: 566 ttgatggacagcagctgagggaactcggccttcagtttcgacgtgtccatctcgttgttg 507 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||| || || ||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 506 cttctaggcgcgactatcaccttggcctgttcttcgagtgtgaaattggtccacttgaaa 447 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || || |||||||||| |||||||||||| ||||||||||| || || ||| | |||||| Sbjct: 446 tcaggattgatgtatttcttgtacatctctagaatctcgttgtggcttacagcgccaggg 387 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || ||||| || |||||||| | |||||||||| Sbjct: 386 ttggtgaagttccatatgcccctgcagtcccgtttcgccatctcaatggagataggcaga 327 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| || |||||||| ||||| |||||||||||||||||||| || || ||||| Sbjct: 326 agctcatccaagattgtcatgctgttgggaatgttcaccaccttgtcgtaacgagctatc 267 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||||| Sbjct: 266 tttgtgatgaagttacgagggttgcttagatctgatgatataggcatcctgaccctaaga 207 Query: 654 gtacagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaa 713 ||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||| Sbjct: 206 gtacagacattatcatactccttcaatagctcttccaccattgctttagttttggaataa 147 Query: 714 aatgaacc 721 || ||||| Sbjct: 146 aaggaacc 139
>dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E05, full insert sequence Length = 2499 Score = 452 bits (228), Expect = e-124 Identities = 423/488 (86%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 2188 aatcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcc 2129 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| Sbjct: 2128 ttgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgtta 2069 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||||||||||||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 2068 cttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaag 2009 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| Sbjct: 2008 tcggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccagga 1949 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| Sbjct: 1948 ttggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaa 1889 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| ||||||||||||||||| || ||| | |||||||||||||| || ||||| Sbjct: 1888 agctcatccaaaattgtcatactgttggggatgattaccaccttgtcataacgagctatc 1829 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| || || ||||| | ||||||||||||||||||||||||| ||| Sbjct: 1828 tttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagc 1769 Query: 654 gtacagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaa 713 |||||||| || ||||| || | ||| | |||||| ||||| ||||| |||||||| ||| Sbjct: 1768 gtacagacgttgtcatattcttgcaacagctcttcaaccatagctttagttttggaataa 1709 Query: 714 aatgaacc 721 ||||||| Sbjct: 1708 tatgaacc 1701
>dbj|AK064303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B05, full insert sequence Length = 1892 Score = 452 bits (228), Expect = e-124 Identities = 423/488 (86%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 1579 aatcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcc 1520 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||||| ||| |||||||| ||||||| ||| || || |||||||||||||| Sbjct: 1519 ttgatggacagtaactcggggaactcggacttcaacttcgatgcatccatttcgttgtta 1460 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||||||||||||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 1459 cttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaag 1400 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| Sbjct: 1399 tcggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccagga 1340 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| Sbjct: 1339 ttggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaa 1280 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 1279 agctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatc 1220 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| || || ||||| | ||||||||||||||||||||||||| ||| Sbjct: 1219 tttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagc 1160 Query: 654 gtacagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaa 713 |||||||| || ||||| || | ||| | |||||| ||||| ||||| |||||||| ||| Sbjct: 1159 gtacagacgttgtcatattcttgcaacagctcttcaaccatagctttagttttggaataa 1100 Query: 714 aatgaacc 721 ||||||| Sbjct: 1099 tatgaacc 1092
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 438 bits (221), Expect = e-119 Identities = 383/437 (87%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 9420368 aatcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcc 9420309 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| Sbjct: 9420308 ttgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgtta 9420249 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||||||||||||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 9420248 cttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaag 9420189 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| Sbjct: 9420188 tcggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccagga 9420129 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| Sbjct: 9420128 ttggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaa 9420069 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 9420068 agctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatc 9420009 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| || || ||||| | ||||||||||||||||||||||||| ||| Sbjct: 9420008 tttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagc 9419949 Query: 654 gtacagacattatcata 670 |||||||| || ||||| Sbjct: 9419948 gtacagacgttgtcata 9419932
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 438 bits (221), Expect = e-119 Identities = 383/437 (87%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 117768 aatcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcc 117709 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| Sbjct: 117708 ttgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgtta 117649 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||||||||||||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 117648 cttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaag 117589 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| Sbjct: 117588 tcggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccagga 117529 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| Sbjct: 117528 ttggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaa 117469 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 117468 agctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatc 117409 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| || || ||||| | ||||||||||||||||||||||||| ||| Sbjct: 117408 tttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagc 117349 Query: 654 gtacagacattatcata 670 |||||||| || ||||| Sbjct: 117348 gtacagacgttgtcata 117332
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 438 bits (221), Expect = e-119 Identities = 383/437 (87%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| ||| Sbjct: 9418489 aatcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcc 9418430 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| Sbjct: 9418429 ttgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgtta 9418370 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||||||||||||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 9418369 cttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaag 9418310 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| Sbjct: 9418309 tcggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccagga 9418250 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| Sbjct: 9418249 ttggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaa 9418190 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 9418189 agctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatc 9418130 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| || || ||||| | ||||||||||||||||||||||||| ||| Sbjct: 9418129 tttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagc 9418070 Query: 654 gtacagacattatcata 670 |||||||| || ||||| Sbjct: 9418069 gtacagacgttgtcata 9418053
>gb|AY103981.1| Zea mays PCO118173 mRNA sequence Length = 1418 Score = 436 bits (220), Expect = e-119 Identities = 421/488 (86%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcc 293 |||| |||||||| | |||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 1206 aatcctcaattagctggaaccttcctgttaggctcaaagacatatttgatcaaagaatcc 1147 Query: 294 ttaatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttg 353 || ||||||| || | || |||||| | ||||| || ||||| ||||| || |||||| Sbjct: 1146 ttgatggacatcagttgagagaactcggccttcaatttcgacgcatccatctcattgttg 1087 Query: 354 cttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaag 413 ||||| ||||| ||||| ||||||| ||||||||||| ||||||||||||||||| || Sbjct: 1086 cttctaggtgcgactatgaccttggattgctcttcgagtgtgaagttggtccacttaaaa 1027 Query: 414 tccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccaggg 473 || || |||||||||| ||||||||||||||||||||| || || |||||||| |||||| Sbjct: 1026 tcaggattgatgtatttcttgtacatctccagaatctcattgtggctgacaacgccaggg 967 Query: 474 ttggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaag 533 |||||||| |||||||||||||| || ||||| ||||||||||| | ||||| |||| Sbjct: 966 ttggtgaagttccatatgcccctgcagtcccgttttgccatctcaatggagatgggcaga 907 Query: 534 agttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctatt 593 || ||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||| Sbjct: 906 agctcatccaaaattgtcatgctgttgggaatgttcaccaccttgtcgtaacgagctatc 847 Query: 594 tttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaaga 653 |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| |||||| Sbjct: 846 tttgtgatgaagttacgaggattgtttagatctgatgatataggcatcctgaccctaaga 787 Query: 654 gtacagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaa 713 ||||||||||||||||| |||||||| | |||||||||||| ||||| |||||||| ||| Sbjct: 786 gtacagacattatcatactccttcaacagctcttccaccattgcttttgttttggaataa 727 Query: 714 aatgaacc 721 || ||||| Sbjct: 726 aaggaacc 719
>gb|AY108467.1| Zea mays PCO142331 mRNA sequence Length = 1381 Score = 188 bits (95), Expect = 2e-44 Identities = 356/443 (80%) Strand = Plus / Minus Query: 252 accttcctgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctca 311 ||||| ||||| ||||||||||| | ||||||||| || ||||| || ||||| ||||| Sbjct: 1164 acctttctgttgggctcaaagacgtacttgatcaacgagtccttgatcgacagcagctcg 1105 Query: 312 gggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactata 371 |||||||| ||||||||| | |||||||| ||||||||||||| || ||||| || Sbjct: 1104 gggaactcgttcttcagcttggttgcgtccatctcgttgttgcttcgcggagcaacgatg 1045 Query: 372 accttggcctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattcc 431 ||||| |||||||| ||||| |||||||| |||||||||||| |||| |||||| | | Sbjct: 1044 accttcgcctgctcctcgagggtgaagtttgtccacttgaagctagggtcgatgtactgc 985 Query: 432 ttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaattccatatg 491 ||||||||||| || |||||||| || ||||| || || ||||||||||| || | ||| Sbjct: 984 ttgtacatctctaggatctcgttgtggctgacgacgccggggttggtgaagttatagatg 925 Query: 492 cccctacaatcccgctttgccatctctacagagataggcaagagttcatctaaaattgtc 551 |||| | || ||| |||||||| || ||||| |||| |||||| || || || ||| Sbjct: 924 ccccgcaggttcctcttcgccatctccactgagatgggcaggagttcgtccaatatcgtc 865 Query: 552 atactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccga 611 || ||||| || |||||||||||||||| || ||| || ||||| | ||||||||| Sbjct: 864 atgctgttggggatgttcaccaccttgttgtaacggctgatctttgtcacgaagttccgc 805 Query: 612 ggattgcttaggtctgatgatatgggcatcctgactctaagagtacagacattatcatag 671 || ||||| ||||| || ||||| ||||||| |||| ||||| ||||| || ||||| Sbjct: 804 gggttgctgaggtcagaggatatcggcatccgaactcgcagagtgcagacgttctcatac 745 Query: 672 tccttcaataactcttccaccat 694 |||||||||||||| || ||||| Sbjct: 744 tccttcaataactcctcgaccat 722
>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence Length = 75970 Score = 139 bits (70), Expect = 1e-29 Identities = 334/422 (79%) Strand = Plus / Minus Query: 267 tcaaagacattcttgatcaaagattccttaatggacagtagctcagggaactctgacttc 326 |||||||||| |||||| || || || || || | ||| | |||||||||||| |||| Sbjct: 28799 tcaaagacatacttgattaatgactctttgattggcagcaactcagggaactcgttcttc 28740 Query: 327 agctttgacgcgtccatttcgttgttgcttcttggtgcaactataaccttggcctgctct 386 ||||| ||||| ||||| || |||||||| | || |||||||| |||||||| ||||| Sbjct: 28739 agcttggacgcatccatctcattgttgctccggggggcaactatcaccttggcttgctcc 28680 Query: 387 tcgagcgtgaagttggtccacttgaagtccgggttgatgtattccttgtacatctccaga 446 || || ||||| ||| | ||||||||||| ||||| | |||||||||||||| | Sbjct: 28679 tctaggtcaaagttaacccatgtaaagtccgggttaatgtagttcttgtacatctccaaa 28620 Query: 447 atctcgttatgactgacaaccccagggttggtgaaattccatatgcccctacaatcccgc 506 ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || | | || | Sbjct: 28619 atctcattatggctcacaacaccagggtttgtgaagttccatatgcctctcaagttcctc 28560 Query: 507 tttgccatctctacagagataggcaagagttcatctaaaattgtcatactgttaggaatg 566 ||||||||||| | || ||||| | ||||| || | || ||||| ||||| |||||| Sbjct: 28559 tttgccatctcaattgaaataggtagaagttcgtccaggatagtcatgctgtttggaatg 28500 Query: 567 ttcaccaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttaggtct 626 ||||||||||| | |||||| | || ||||| |||||||| || || ||| |||||||| Sbjct: 28499 ttcaccaccttattatagcgagaaatctttgtaatgaagttgcgtgggttgtttaggtct 28440 Query: 627 gatgatatgggcatcctgactctaagagtacagacattatcatagtccttcaataactct 686 |||||||| ||||| || ||||| || || || ||||| ||||| || ||||| | |||| Sbjct: 28439 gatgatattggcattctaactctgagggtgcacacattgtcatactctttcaaaagctct 28380 Query: 687 tc 688 || Sbjct: 28379 tc 28378
>ref|NM_106505.3| Arabidopsis thaliana ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); transferase, transferring glycosyl groups AT1G78580 (ATTPS1) mRNA, complete cds Length = 4635 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Plus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 3236 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 3295 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 3296 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 3355 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 3356 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 3415 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 3416 accacacctgggtttgtgaagttcca 3441
>ref|NM_106504.2| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.1 mRNA, complete cds Length = 2744 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2151 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2092 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2091 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2032 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2031 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1972 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 1971 accacacctgggtttgtgaagttcca 1946
>ref|NM_001036220.1| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.2 mRNA, complete cds Length = 2912 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2285 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2226 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2225 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2166 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2165 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 2106 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 2105 accacacctgggtttgtgaagttcca 2080
>gb|BT014616.1| Lycopersicon esculentum clone 134102R, mRNA sequence Length = 2345 Score = 83.8 bits (42), Expect = 7e-13 Identities = 297/382 (77%) Strand = Plus / Minus Query: 259 tgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctcagggaact 318 ||||||| ||||| || | |||||||| || || ||||| || || | ||| ||||||| Sbjct: 2123 tgtttggttcaaaaacgtacttgatcagcgactctttaattgatagcaactcggggaact 2064 Query: 319 ctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactataaccttgg 378 || ||||| |||||| || ||||| || ||||| || | | |||||| || ||||||| Sbjct: 2063 ctttcttcaactttgatgcatccatctcattgttactgcgagctgcaacgattaccttgg 2004 Query: 379 cctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattccttgtaca 438 |||||||||| | ||||||||||| | | || | || | ||| |||| |||||||| Sbjct: 2003 cctgctcttccaccgtgaagttggcataagtaaatgctggatcgatatatttcttgtaca 1944 Query: 439 tctccagaatctcgttatgactgacaaccccagggttggtgaaattccatatgcccctac 498 | |||| ||||| ||||| || ||||| || ||||| ||||||||||||||||| || Sbjct: 1943 tttccaatatctcattatggctcacaacacccgggtttgtgaaattccatatgcctctga 1884 Query: 499 aatcccgctttgccatctctacagagataggcaagagttcatctaaaattgtcatactgt 558 || |||||||||||||| | || ||||| | || ||||| || || |||||||||| Sbjct: 1883 gattacgctttgccatctcaattgaaataggaagaagctcatccaatatggtcatactgt 1824 Query: 559 taggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccgaggattgc 618 ||||||| || |||||||| | ||||||| || || || ||||| || ||||| |||| Sbjct: 1823 taggaatattgaccaccttattatagcggctgatcttggtaatgaaattgcgagggttgc 1764 Query: 619 ttaggtctgatgatatgggcat 640 | || ||||| ||||| ||||| Sbjct: 1763 tgagatctgaagatattggcat 1742
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Plus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 38575 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 38634 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 38635 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 38694 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 38695 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 38754 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 38755 accacacctgggtttgtgaagttcca 38780
>gb|AY081471.1| Arabidopsis thaliana similar to dTDP-D-glucose 4,6-dehydratase (At1g78570) mRNA, complete cds Length = 2126 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 1976 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 1917 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 1916 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 1857 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 1856 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1797 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 1796 accacacctgggtttgtgaagttcca 1771
>gb|AY042833.1| Arabidopsis thaliana Similar to dTDP-D-glucose 4,6-dehydratase (T30F21.10) mRNA, complete cds Length = 2347 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2151 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2092 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2091 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2032 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2031 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1972 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 1971 accacacctgggtttgtgaagttcca 1946
>emb|BX815784.1|CNS0AAK8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2309 Score = 83.8 bits (42), Expect = 7e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 282 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 341 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2152 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2093 Query: 342 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 401 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2092 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2033 Query: 402 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 461 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2032 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1973 Query: 462 acaaccccagggttggtgaaattcca 487 || || || ||||| ||||| ||||| Sbjct: 1972 accacacctgggtttgtgaagttcca 1947
>ref|NM_104228.3| Arabidopsis thaliana MUM4 (MUCILAGE-MODIFIED 4); catalytic AT1G53500 (MUM4) mRNA, complete cds Length = 2526 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 2222 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 2163 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 2162 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 2103 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 2102 ctcaccacccctgggttggtgaaattccatatgcc 2068 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Minus Query: 597 gtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaagagta 656 ||||||||||| | || ||| |||||||||| || || ||||||| |||||| | ||| Sbjct: 1964 gtgatgaagtttctcgggttgtttaggtctgaggagattggcatccggactctcaaggta 1905 Query: 657 cagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaaaat 716 || ||||| ||| | || |||| | ||| || ||||||||||||||||| ||||| || Sbjct: 1904 catacattgtcaaattctctcaagagctcctcaaccatggctttggttttcgagtagaaa 1845 Query: 717 gaacc 721 ||||| Sbjct: 1844 gaacc 1840
>gb|AY328518.1| Arabidopsis thaliana putative UDP-L-rhamnose synthase MUM4 (MUM4) mRNA, complete cds Length = 2479 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 2223 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 2164 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 2163 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 2104 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 2103 ctcaccacccctgggttggtgaaattccatatgcc 2069 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Minus Query: 597 gtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaagagta 656 ||||||||||| | || ||| |||||||||| || || ||||||| |||||| | ||| Sbjct: 1965 gtgatgaagtttctcgggttgtttaggtctgaggagattggcatccggactctcaaggta 1906 Query: 657 cagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaaaat 716 || ||||| ||| | || |||| | ||| || ||||||||||||||||| ||||| || Sbjct: 1905 catacattgtcaaattctctcaagagctcctctaccatggctttggttttcgagtagaaa 1846 Query: 717 gaacc 721 ||||| Sbjct: 1845 gaacc 1841
>emb|AJ565874.1|ATH565874 Arabidopsis thaliana mRNA for putative NDP-rhamnose synthase (rhm2 gene) Length = 2004 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 1913 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 1854 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 1853 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 1794 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 1793 ctcaccacccctgggttggtgaaattccatatgcc 1759 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Minus Query: 597 gtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaagagta 656 ||||||||||| | || ||| |||||||||| || || ||||||| |||||| | ||| Sbjct: 1655 gtgatgaagtttctcgggttgtttaggtctgaggagattggcatccggactctcaaggta 1596 Query: 657 cagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaaaat 716 || ||||| ||| | || |||| | ||| || ||||||||||||||||| ||||| || Sbjct: 1595 catacattgtcaaattctctcaagagctcctcaaccatggctttggttttcgagtagaaa 1536 Query: 717 gaacc 721 ||||| Sbjct: 1535 gaacc 1531
>gb|AY048277.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1739 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 1483 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 1424 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 1423 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 1364 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 1363 ctcaccacccctgggttggtgaaattccatatgcc 1329 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Minus Query: 597 gtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaagagta 656 ||||||||||| | || ||| |||||||||| || || ||||||| |||||| | ||| Sbjct: 1225 gtgatgaagtttctcgggttgtttaggtctgaggagattggcatccggactctcaaggta 1166 Query: 657 cagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaaaat 716 || ||||| ||| | || |||| | ||| || ||||||||||||||||| ||||| || Sbjct: 1165 catacattgtcaaattctctcaagagctcctcaaccatggctttggttttcgagtagaaa 1106 Query: 717 gaacc 721 ||||| Sbjct: 1105 gaacc 1101
>emb|BX817582.1|CNS0AEDB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 227 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 168 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 167 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 108 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 107 ctcaccacccctgggttggtgaaattccatatgcc 73
>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete sequence Length = 111936 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 104937 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 104878 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 104877 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 104818 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 104817 ctcaccacccctgggttggtgaaattccatatgcc 104783 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 690 accatggctttggttttggagtaaaatgaacc 721 ||||||||||||||||| ||||| || ||||| Sbjct: 104507 accatggctttggttttcgagtagaaagaacc 104476
>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 99960 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 63843 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 63784 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 63783 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 63724 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 63723 ctcaccacccctgggttggtgaaattccatatgcc 63689 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 690 accatggctttggttttggagtaaaatgaacc 721 ||||||||||||||||| ||||| || ||||| Sbjct: 63413 accatggctttggttttcgagtagaaagaacc 63382
>gb|BT002264.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1497 Score = 77.8 bits (39), Expect = 5e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 1406 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 1347 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 1346 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 1287 Query: 459 ctgacaaccccagggttggtgaaattccatatgcc 493 || || ||||| ||||||||||||||||||||||| Sbjct: 1286 ctcaccacccctgggttggtgaaattccatatgcc 1252 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Minus Query: 597 gtgatgaagttccgaggattgcttaggtctgatgatatgggcatcctgactctaagagta 656 ||||||||||| | || ||| |||||||||| || || ||||||| |||||| | ||| Sbjct: 1148 gtgatgaagtttctcgggttgtttaggtctgaggagattggcatccggactctcaaggta 1089 Query: 657 cagacattatcatagtccttcaataactcttccaccatggctttggttttggagtaaaat 716 || ||||| ||| | || |||| | ||| || ||||||||||||||||| ||||| || Sbjct: 1088 catacattgtcaaattctctcaagagctcctcaaccatggctttggttttcgagtagaaa 1029 Query: 717 gaacc 721 ||||| Sbjct: 1028 gaacc 1024
>gb|AF359121.1| Pinus sylvestris isolate plus tree E635C putative dTDP-glucose 4,6-dehydratase gene, partial cds Length = 212 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 422 gatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaa 481 |||||| ||| ||||||||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 90 gatgtagtccctgtacatctccaggatctcgttgtggctaacaaccccagggttcgtgaa 31 Query: 482 attcca 487 |||||| Sbjct: 30 attcca 25
>ref|NM_112340.2| Arabidopsis thaliana RHM3; catalytic AT3G14790 (RHM3) mRNA, complete cds Length = 2332 Score = 73.8 bits (37), Expect = 7e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 2057 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 1998 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 1997 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 1938 Query: 459 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 518 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 1937 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 1878 Query: 519 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 578 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 1877 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 1818 Query: 579 t 579 | Sbjct: 1817 t 1817
>gb|AY142060.1| Arabidopsis thaliana At3g14790/T21E2_4 mRNA, complete cds Length = 1995 Score = 73.8 bits (37), Expect = 7e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 1904 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 1845 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 1844 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 1785 Query: 459 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 518 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 1784 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 1725 Query: 519 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 578 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 1724 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 1665 Query: 579 t 579 | Sbjct: 1664 t 1664
>gb|AY078958.1| Arabidopsis thaliana AT3g14790/T21E2_4 mRNA, complete cds Length = 2332 Score = 73.8 bits (37), Expect = 7e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 2057 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 1998 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 1997 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 1938 Query: 459 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 518 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 1937 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 1878 Query: 519 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 578 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 1877 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 1818 Query: 579 t 579 | Sbjct: 1817 t 1817
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 73.8 bits (37), Expect = 7e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 339 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 398 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 10282 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 10223 Query: 399 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 458 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 10222 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 10163 Query: 459 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 518 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 10162 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 10103 Query: 519 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 578 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 10102 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 10043 Query: 579 t 579 | Sbjct: 10042 t 10042
>gb|AF359122.1| Pinus sylvestris isolate plus tree E1101 putative dTDP-glucose 4,6-dehydratase gene, partial cds Length = 212 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 422 gatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaa 481 |||||| ||| ||||||||||||| ||||| || || || |||||||||||||| ||||| Sbjct: 90 gatgtagtccctgtacatctccaggatctcattgtggctaacaaccccagggttcgtgaa 31 Query: 482 attcca 487 |||||| Sbjct: 30 attcca 25
>gb|AF051236.1|AF051236 Picea mariana hypothetical protein (Sb50) mRNA, partial cds Length = 1139 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 422 gatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaa 481 |||||| ||| ||||||||||||| |||||||| || || || ||||||||||| ||||| Sbjct: 635 gatgtagtccctgtacatctccaggatctcgttgtggctaaccaccccagggttcgtgaa 576 Query: 482 attcca 487 |||||| Sbjct: 575 attcca 570 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 564 atgttcaccaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttagg 623 ||||| || |||||||||||||||| || || ||||||||||| ||||| || || Sbjct: 493 atgttgacgaccttgtcatagcgggagatcttggtgatgaagttgcgagggttcgacaga 434 Query: 624 tctgatgatatgggcatcctgactc 648 ||||| || |||||||||||||||| Sbjct: 433 tctgaagaaatgggcatcctgactc 409
>emb|AJ718258.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-23-450, cultivar Bright Yellow 2 Length = 373 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 306 agctcagggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgca 365 ||||||||||||||| ||||| |||||| || ||||| |||||||| || | | |||| Sbjct: 110 agctcagggaactctttcttcaactttgatgcatccatctcgttgttactgcgagctgca 51 Query: 366 actataaccttggcctgctcttcgagcgtgaagttgg 402 || || ||||||||||||||||| | |||||||||| Sbjct: 50 acaattaccttggcctgctcttccaatgtgaagttgg 14
>dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H09, full insert sequence Length = 1447 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 570 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttaggtctgat 629 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| ||| || ||| Sbjct: 719 accactttatcataccgggcgattttagtgatgaagttgcgaggattggatagatcggat 660 Query: 630 gatatgggcatcctgactctaagagtacagacattatcatagtccttcaataactcttcc 689 || || |||||||| || | ||| ||||| ||||| || |||| || | | || || Sbjct: 659 gaaataggcatccttacacgaagtgtacatacattctcgtagttttttagcagttcctca 600 Query: 690 accatggctttggttttggagtaaaatga 718 |||||||| |||||||||||||| ||||| Sbjct: 599 accatggccttggttttggagtagaatga 571 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 351 ttgcttcttggtgcaactataaccttggcctgctc 385 |||||||| ||||||||||| |||||||| ||||| Sbjct: 938 ttgcttctcggtgcaactatgaccttggcttgctc 904
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 570 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttaggtctgat 629 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| ||| || ||| Sbjct: 27730906 accactttatcataccgggcgattttagtgatgaagttgcgaggattggatagatcggat 27730847 Query: 630 gatatgggcatcctgactctaagagtacagacatt 664 || || |||||||| || | ||| ||||| ||||| Sbjct: 27730846 gaaataggcatccttacacgaagtgtacatacatt 27730812 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 351 ttgcttcttggtgcaactataaccttggcctgctc 385 |||||||| ||||||||||| |||||||| ||||| Sbjct: 27731125 ttgcttctcggtgcaactatgaccttggcttgctc 27731091 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 690 accatggctttggttttggagtaaaatga 718 |||||||| |||||||||||||| ||||| Sbjct: 27728475 accatggccttggttttggagtagaatga 27728447
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 570 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttaggtctgat 629 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| ||| || ||| Sbjct: 16239 accactttatcataccgggcgattttagtgatgaagttgcgaggattggatagatcggat 16180 Query: 630 gatatgggcatcctgactctaagagtacagacatt 664 || || |||||||| || | ||| ||||| ||||| Sbjct: 16179 gaaataggcatccttacacgaagtgtacatacatt 16145 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 351 ttgcttcttggtgcaactataaccttggcctgctc 385 |||||||| ||||||||||| |||||||| ||||| Sbjct: 16458 ttgcttctcggtgcaactatgaccttggcttgctc 16424 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 690 accatggctttggttttggagtaaaatga 718 |||||||| |||||||||||||| ||||| Sbjct: 13808 accatggccttggttttggagtagaatga 13780
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 570 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttaggtctgat 629 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| ||| || ||| Sbjct: 116772 accactttatcataccgggcgattttagtgatgaagttgcgaggattggatagatcggat 116713 Query: 630 gatatgggcatcctgactctaagagtacagacatt 664 || || |||||||| || | ||| ||||| ||||| Sbjct: 116712 gaaataggcatccttacacgaagtgtacatacatt 116678 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 351 ttgcttcttggtgcaactataaccttggcctgctc 385 |||||||| ||||||||||| |||||||| ||||| Sbjct: 116991 ttgcttctcggtgcaactatgaccttggcttgctc 116957 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 690 accatggctttggttttggagtaaaatga 718 |||||||| |||||||||||||| ||||| Sbjct: 114341 accatggccttggttttggagtagaatga 114313
>ref|XM_806362.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503925.40) partial mRNA Length = 954 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 549 gtcatactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttc 608 ||||||||||| || |||||||||||||| || ||| || ||||| |||||||||||| Sbjct: 605 gtcatactgttcgggatgttcaccaccttctcgtagttagcaattttggtgatgaagttc 546
>gb|AC104940.2| Homo sapiens chromosome 8, clone RP11-378J9, complete sequence Length = 215962 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 51 caggccaatgaacatatccaccac 74 |||||||||||||||||||||||| Sbjct: 118084 caggccaatgaacatatccaccac 118107
>gb|AC015522.6|AC015522 Homo sapiens chromosome 8, clone RP11-327O12, complete sequence Length = 147026 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 51 caggccaatgaacatatccaccac 74 |||||||||||||||||||||||| Sbjct: 109888 caggccaatgaacatatccaccac 109865
>gb|AC010848.14| Drosophila melanogaster clone BACR20N11, complete sequence Length = 175978 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 taatgcgtaacaaaaaatcgtaa 131 ||||||||||||||||||||||| Sbjct: 35175 taatgcgtaacaaaaaatcgtaa 35197 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 taatgcgtaacaaaaaatcgtaa 131 ||||||||||||||||||||||| Sbjct: 10190 taatgcgtaacaaaaaatcgtaa 10168
>gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete sequence Length = 166908 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 taatgcgtaacaaaaaatcgtaa 131 ||||||||||||||||||||||| Sbjct: 150545 taatgcgtaacaaaaaatcgtaa 150567 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 taatgcgtaacaaaaaatcgtaa 131 ||||||||||||||||||||||| Sbjct: 125560 taatgcgtaacaaaaaatcgtaa 125538
>gb|AC183836.2| Pan troglodytes BAC clone CH251-131N24 from chromosome 8, complete sequence Length = 172056 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 139 tgcctgctgctataccacaatagaatt 165 |||||||||||| |||||||||||||| Sbjct: 44503 tgcctgctgctagaccacaatagaatt 44529
>gb|AC144698.1| Homo sapiens chromosome 8, clone XXfos-85140A10, complete sequence Length = 42427 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 139 tgcctgctgctataccacaatagaatt 165 |||||||||||| |||||||||||||| Sbjct: 11562 tgcctgctgctagaccacaatagaatt 11588
>gb|AC010785.8| Homo sapiens, clone RP11-6O24, complete sequence Length = 146665 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 139 tgcctgctgctataccacaatagaatt 165 |||||||||||| |||||||||||||| Sbjct: 119126 tgcctgctgctagaccacaatagaatt 119100
>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the complete sequence Length = 283558 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 taatgcgtaacaaaaaatcgtaa 131 ||||||||||||||||||||||| Sbjct: 246777 taatgcgtaacaaaaaatcgtaa 246799 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 taatgcgtaacaaaaaatcgtaa 131 ||||||||||||||||||||||| Sbjct: 221792 taatgcgtaacaaaaaatcgtaa 221770
>ref|NM_003012.3| Homo sapiens secreted frizzled-related protein 1 (SFRP1), mRNA Length = 4465 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 atatattagctaattagaaata 208 |||||||||||||||||||||| Sbjct: 3144 atatattagctaattagaaata 3165
>gb|BC036503.1| Homo sapiens secreted frizzled-related protein 1, mRNA (cDNA clone MGC:43294 IMAGE:5265277), complete cds Length = 4482 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 atatattagctaattagaaata 208 |||||||||||||||||||||| Sbjct: 3160 atatattagctaattagaaata 3181
>gb|AC103846.2| Homo sapiens chromosome 8, clone RP11-645H17, complete sequence Length = 171133 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 atatattagctaattagaaata 208 |||||||||||||||||||||| Sbjct: 39586 atatattagctaattagaaata 39607
>dbj|AK127331.1| Homo sapiens cDNA FLJ45402 fis, clone BRHIP3029409, moderately similar to Homo sapiens secreted frizzled-related protein 1 (SFRP1) Length = 3872 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 atatattagctaattagaaata 208 |||||||||||||||||||||| Sbjct: 2566 atatattagctaattagaaata 2587
>gb|AC104393.6| Homo sapiens chromosome 8, clone CTD-3080F16, complete sequence Length = 188270 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 atatattagctaattagaaata 208 |||||||||||||||||||||| Sbjct: 47463 atatattagctaattagaaata 47484
>emb|BX248239.12| Zebrafish DNA sequence from clone CH211-213I9 in linkage group 2, complete sequence Length = 200856 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 689 caccatggctttggttttggag 710 |||||||||||||||||||||| Sbjct: 105307 caccatggctttggttttggag 105328
>gb|AF056087.1|AF056087 Homo sapiens secreted frizzled related protein mRNA, complete cds Length = 4469 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 atatattagctaattagaaata 208 |||||||||||||||||||||| Sbjct: 3137 atatattagctaattagaaata 3158
>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a, complete sequence Length = 54726 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 258 ctgtttggctcaaagacattcttgat 283 |||||||| ||||||||||||||||| Sbjct: 7579 ctgtttgggtcaaagacattcttgat 7604
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 aatatattagctaattagaaa 206 ||||||||||||||||||||| Sbjct: 110344 aatatattagctaattagaaa 110324
>emb|AL139400.9| Human DNA sequence from clone RP13-36G14 on chromosome Xq13.1-13.3 Contains the 3' end of a novel gene, a laminin receptor 1 (ribosomal protein SA, 67 KDa, LAMR1) pseudogene, a scotin pseudogene and a novel alanyl-tRNA synthetase protein pseudogene, complete sequence Length = 87430 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 aaaaatcgtaaatatgtatgc 141 ||||||||||||||||||||| Sbjct: 31139 aaaaatcgtaaatatgtatgc 31159
>gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chromosome unknown, complete sequence Length = 179813 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ttggccacagctgccaccgtg 184 ||||||||||||||||||||| Sbjct: 34634 ttggccacagctgccaccgtg 34614
>emb|AJ272265.1|HSA272265 Homo sapiens SPP2 gene for secreted phosphoprotein 24 precursor, exons 1-8 Length = 30000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ttggccacagctgccaccgtg 184 ||||||||||||||||||||| Sbjct: 28261 ttggccacagctgccaccgtg 28241
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 aatatattagctaattagaaa 206 ||||||||||||||||||||| Sbjct: 3232627 aatatattagctaattagaaa 3232607
>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198481 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 tcaaagacattcttgatcaaa 287 ||||||||||||||||||||| Sbjct: 152235 tcaaagacattcttgatcaaa 152255
>gb|AC006037.2| Homo sapiens BAC clone RP11-263G22 from 2, complete sequence Length = 108711 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ttggccacagctgccaccgtg 184 ||||||||||||||||||||| Sbjct: 51740 ttggccacagctgccaccgtg 51760
>gb|AC132216.7| Homo sapiens chromosome 11, clone RP13-786C16, complete sequence Length = 174373 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 atgaatcttcaattagtagaa 251 ||||||||||||||||||||| Sbjct: 136452 atgaatcttcaattagtagaa 136472
>gb|AY104924.1| Zea mays PCO065449 mRNA sequence Length = 1135 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 690 accatggctttggttttggagtaaaatga 718 |||||||| |||||||||||||| ||||| Sbjct: 635 accatggccttggttttggagtagaatga 607
>emb|CR848750.27| Zebrafish DNA sequence from clone RP71-4B23 in linkage group 15, complete sequence Length = 148714 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ttttaagatctgttctcaata 44 ||||||||||||||||||||| Sbjct: 57983 ttttaagatctgttctcaata 58003
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 aatatattagctaattagaaa 206 ||||||||||||||||||||| Sbjct: 26451 aatatattagctaattagaaa 26431
>gb|AC153799.1| Mus musculus BAC RP23-145M15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aaatcgtaaatatgtatgcctgct 146 |||| ||||||||||||||||||| Sbjct: 186647 aaattgtaaatatgtatgcctgct 186670
>ref|NM_104978.3| Arabidopsis thaliana NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE) AT1G63000 (NRS/ER) mRNA, complete cds Length = 1265 Score = 40.1 bits (20), Expect = 10.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 433 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 484 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 826 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 775
>ref|XM_640708.1| Dictyostelium discoideum hypothetical protein (DDB0216852), partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcttggtgcaactataac 373 |||||||||||||||||||| Sbjct: 53 cttcttggtgcaactataac 34
>ref|XM_628843.1| Dictyostelium discoideum hypothetical protein (DDB0215060), partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcttggtgcaactataac 373 |||||||||||||||||||| Sbjct: 53 cttcttggtgcaactataac 34
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 cgttgttgcttcttggtgca 365 |||||||||||||||||||| Sbjct: 60791 cgttgttgcttcttggtgca 60810
>ref|XM_711759.1| Candida albicans SC5314 DnaJ-like protein (CaO19_8569), mRNA Length = 1320 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 674 cttcaataactcttccaccatggc 697 |||||||||||||| ||||||||| Sbjct: 700 cttcaataactcttgcaccatggc 677
>ref|XM_711699.1| Candida albicans SC5314 DnaJ-like protein (CaO19_954), mRNA Length = 1320 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 674 cttcaataactcttccaccatggc 697 |||||||||||||| ||||||||| Sbjct: 700 cttcaataactcttgcaccatggc 677
>gb|AC131694.4| Mus musculus BAC clone RP23-393L24 from chromosome 6, complete sequence Length = 187925 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aaatcgtaaatatgtatgcctgct 146 |||| ||||||||||||||||||| Sbjct: 37378 aaattgtaaatatgtatgcctgct 37401
>gb|AY915621.1| Schistosoma japonicum SJCHGC08117 protein mRNA, partial cds Length = 329 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 aaatatattagctaattagaaata 208 |||||||||||| ||||||||||| Sbjct: 317 aaatatattagcgaattagaaata 294
>gb|AY513232.1| Arabidopsis thaliana 3,5-epimerase/4-reductase (NRS/ER) mRNA, complete cds Length = 906 Score = 40.1 bits (20), Expect = 10.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 433 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 484 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 709 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 658
>ref|XM_803926.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510349.10) partial mRNA Length = 954 Score = 40.1 bits (20), Expect = 10.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 549 gtcatactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttc 608 ||||||||||| || || |||||||||| || ||| ||| ||||| |||||||||||| Sbjct: 605 gtcatactgttcgggatactcaccaccttctcgtagttggcaattttggtgatgaagttc 546
>gb|AC102933.6| Mus musculus chromosome 8, clone RP24-211I18, complete sequence Length = 172489 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tataccacaatagaattggc 168 |||||||||||||||||||| Sbjct: 30512 tataccacaatagaattggc 30493
>emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 on chromosome Xq26.3-27.3 Contains a ribosomal protein L36a (RPL36A) pseudogene, complete sequence Length = 123556 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aatcttcaattagtagaaac 253 |||||||||||||||||||| Sbjct: 76749 aatcttcaattagtagaaac 76730
>emb|BX842568.3| Human DNA sequence from clone RP11-31H15 on chromosome X Contains the gene for a novel protein, a transmembrane 4 superfamily member 10 (TM4SF10) pseudogene, a transcription factor Dp-1 (TFDP1) pseudogene, a novel pseudogene and two ferritin, heavy polypeptide-like 17 (FTHL17) pseudogenes, complete sequence Length = 161540 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gcctgctgctataccacaatagaa 163 |||||||||||||||||| ||||| Sbjct: 112278 gcctgctgctataccacagtagaa 112301
>gb|AC097361.2| Homo sapiens chromosome 3 clone RP11-722P17, complete sequence Length = 175036 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 aaatggaaaagattttaaga 31 |||||||||||||||||||| Sbjct: 55906 aaatggaaaagattttaaga 55925
>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3 Contains a NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a novel gene, complete sequence Length = 213084 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aatcttcaattagtagaaac 253 |||||||||||||||||||| Sbjct: 70371 aatcttcaattagtagaaac 70390
>ref|NM_001017247.2| Xenopus tropicalis kinesin 2 60/70kDa (kns2), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctataccacaatagaattgg 167 |||||||||||||||||||| Sbjct: 1642 ctataccacaatagaattgg 1623
>gb|AC153914.5| Mus musculus 10 BAC RP23-297H17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174199 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aatggaaaagattttaagat 32 |||||||||||||||||||| Sbjct: 137870 aatggaaaagattttaagat 137851
>emb|AL732490.10| Mouse DNA sequence from clone RP23-17C2 on chromosome 11 Contains part of a novel gene, the Phb gene for prohibitin and the 3' end of a novel gene, complete sequence Length = 84919 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ccgctttgccatctctacag 522 |||||||||||||||||||| Sbjct: 42988 ccgctttgccatctctacag 43007
>gb|AC122177.2| Homo sapiens chromosome 3 clone RP11-411F11, complete sequence Length = 167908 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 aaatggaaaagattttaaga 31 |||||||||||||||||||| Sbjct: 26507 aaatggaaaagattttaaga 26526
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ttccttgtacatctccagaa 447 |||||||||||||||||||| Sbjct: 2650294 ttccttgtacatctccagaa 2650313
>gb|AF332445.1| Arabidopsis thaliana clone C00141 (e) unknown protein (At1g63000) mRNA, complete cds Length = 906 Score = 40.1 bits (20), Expect = 10.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 433 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 484 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 709 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 658
>gb|AF387005.1|AF387005 Arabidopsis thaliana Unknown protein (F16P17.17) mRNA, complete cds Length = 1230 Score = 40.1 bits (20), Expect = 10.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 433 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 484 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 786 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 735
>emb|BX815284.1|CNS0AAH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS49ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1224 Score = 40.1 bits (20), Expect = 10.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 433 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 484 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 826 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 775
>gb|AC087879.8| Homo sapiens 12q BAC RP11-166B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165693 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 atattagctaattagaaata 208 |||||||||||||||||||| Sbjct: 103070 atattagctaattagaaata 103089
>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 98412 Score = 40.1 bits (20), Expect = 10.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 433 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 484 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 70029 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 69978
>dbj|AB020755.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZN1 Length = 81672 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ttgatcaaagattccttaat 298 |||||||||||||||||||| Sbjct: 72157 ttgatcaaagattccttaat 72176
>gb|AC008109.6|AC008109 Homo sapiens chromosome 18, clone RP11-476K15, complete sequence Length = 166819 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tgtcacatgaatcttcaatt 244 |||||||||||||||||||| Sbjct: 134230 tgtcacatgaatcttcaatt 134249
>emb|CR760139.2| Xenopus tropicalis finished cDNA, clone TNeu076h23 Length = 1846 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctataccacaatagaattgg 167 |||||||||||||||||||| Sbjct: 1642 ctataccacaatagaattgg 1623
>emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chromosome 2, complete sequence Length = 107108 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gttgttgcttcttggtgcaa 366 |||||||||||||||||||| Sbjct: 41238 gttgttgcttcttggtgcaa 41257
>dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-288C17, complete sequences Length = 143259 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tgtcacatgaatcttcaatt 244 |||||||||||||||||||| Sbjct: 126883 tgtcacatgaatcttcaatt 126864 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,761,989 Number of Sequences: 3902068 Number of extensions: 6761989 Number of successful extensions: 120834 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120504 Number of HSP's gapped (non-prelim): 311 length of query: 728 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 705 effective length of database: 17,143,297,704 effective search space: 12086024881320 effective search space used: 12086024881320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
