ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009248.1| Triticum aestivum clone wlk1.pk0025.e2:fis, full ... 638 e-180
2gb|AY105904.1| Zea mays PCO126705 mRNA sequence 278 2e-71
3ref|XM_549860.1| Oryza sativa (japonica cultivar-group), mRNA 272 1e-69
4dbj|AK071405.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
6dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
7gb|BC063222.1| Xenopus tropicalis prolyl endopeptidase, mRNA (cD... 52 0.002
8ref|NM_203858.1| Xenopus tropicalis prolyl endopeptidase (prep),... 52 0.002
9gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 50 0.009
10ref|NM_001020753.1| Danio rerio zgc:110670 (zgc:110670), mRNA 46 0.15
11gb|BC095363.1| Danio rerio zgc:110670, mRNA (cDNA clone MGC:1106... 46 0.15
12gb|BC090517.1| Danio rerio cDNA clone IMAGE:7140031 46 0.15
13ref|NM_174772.1| Bos taurus prolyl oligopeptidase (PREP), mRNA 44 0.58
14dbj|AB028866.1| Bos taurus mRNA for prolyl oligopeptidase, compl... 44 0.58
15emb|AL353717.13| Human DNA sequence from clone RP11-562M8 on chr... 42 2.3
16gb|AY170316.1| Porcine lymphotropic herpesvirus 3 isolate 489 lo... 42 2.3
17gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell ... 42 2.3
18emb|AL359238.4|CNS05TEP Human chromosome 14 DNA sequence BAC R-4... 42 2.3
19emb|AL831731.6| Mouse DNA sequence from clone RP23-442K11 on chr... 42 2.3
20gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence 40 9.0
21gb|AY433117.1| Aedes aegypti ASAP ID: 36447 vesicular transmembr... 40 9.0
22gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete... 40 9.0
23gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complet... 40 9.0
24gb|AC107720.16| Mus musculus chromosome 5, clone RP23-188F20, co... 40 9.0
25gb|AY552062.1| Aedes aegypti putative coated vesicle membrane pr... 40 9.0
26gb|BC071008.1| Xenopus laevis similar to prolyl endopeptidase, m... 40 9.0
27gb|BC047161.1| Xenopus laevis similar to prolyl endopeptidase, m... 40 9.0
28ref|XM_449941.1| Candida glabrata CBS138 hypothetical protein (C... 40 9.0
29gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, comple... 40 9.0
30gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete ... 40 9.0
31emb|BX322532.2| Human DNA sequence from clone RP11-543A11 on chr... 40 9.0
32emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 40 9.0
33gb|BC098959.1| Xenopus laevis similar to prolyl endopeptidase, m... 40 9.0
34gb|AC090999.1| Caenorhabditis elegans cosmid Y82E9BR, complete s... 40 9.0
35gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome ... 40 9.0
36gb|AC017109.5| Homo sapiens chromosome 4 clone RP11-568O24, comp... 40 9.0
37gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosom... 40 9.0
38gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, com... 40 9.0
39gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, co... 40 9.0
40gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Can... 40 9.0
41gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Can... 40 9.0
42emb|BX641096.1|HSM806926 Homo sapiens mRNA; cDNA DKFZp686N03151 ... 40 9.0
43gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65... 40 9.0
44gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, comple... 40 9.0 
>gb|BT009248.1| Triticum aestivum clone wlk1.pk0025.e2:fis, full insert mRNA sequence
          Length = 1924

 Score =  638 bits (322), Expect = e-180
 Identities = 347/354 (98%), Gaps = 1/354 (0%)
 Strand = Plus / Minus

                                                                        
Query: 306  ggacagaatt-aactactcagtccatgtagcgcccaacatctttgacataaaactgtaac 364
            |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1624 ggacagaattgaactactcagtccatgtagcgcccaacatcttcgacataaaactgtaac 1565

                                                                        
Query: 365  ggtccgcagcctcatcaatcaattttttagtcggcctgccagctccatgccctgacttgc 424
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ggtccgcggcctcatcaatcaattttttagtcggcctgccagctccatgccctgacttgc 1505

                                                                        
Query: 425  ggtcaatgcggccaattattgggttggtctgcgggctgttctcaatgctagtgcacaaga 484
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 ggtcaatgcgaccaattattgggttggtctgcgggctgttctcaatgctagtgcacaaga 1445

                                                                        
Query: 485  catgttgcattgtagccaacaacttcagcgagtgcaatggcacaacacggtcatcatgat 544
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 catgctgcattgtagccaacaacttcagcgagtgcaatggcacaacacggtcatcatgat 1385

                                                                        
Query: 545  cagctgtcaacagcatggttgctggatattgacaattatcaccaaagctttgctcccaag 604
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1384 cagctgtcaacagcatggttgctggatactgacaattatcaccaaagctttgctcccaag 1325

                                                                  
Query: 605  gtctcctcacgttatgaaggggagaatatttgataagccagccgaattcttctt 658
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 gtctcttcacgttatgaaggggagaatatttgataagccagccgaattcttctt 1271



 Score =  258 bits (130), Expect = 2e-65
 Identities = 191/210 (90%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                        
Query: 35   gactaaatcattccagccagaccgcttcattggtccatttcaagtttccaacaatatttt 94
            ||||||||| |||||||||||| |||||||||||||||||||||||| |||||  |||||
Sbjct: 1842 gactaaatcgttccagccagacagcttcattggtccatttcaagttttcaacagcatttt 1783

                                                                        
Query: 95   tctaagcagaaacacacaccc-ttccacatatggaagaatatataggctcgggtaagctt 153
            ||||||||||||||||||||| || |||||| |||||||||||||||||| | |||||||
Sbjct: 1782 tctaagcagaaacacacacccctttcacatacggaagaatatataggctccgataagctt 1723

                                                                        
Query: 154  gcaccacacaaacattggaagtgttgtcaacttcaaagagttgtgatacttgaactcaaa 213
            |||| ||||| |||||| ||||||||| | ||||||||| ||||  ||||||||||||||
Sbjct: 1722 gcacaacacagacattgtaagtgttgtaagcttcaaagaattgtagtacttgaactcaaa 1663

                                          
Query: 214  aactgttcagcagctgaagcgataacaatc 243
            |||||||||||||||||||||||| |||||
Sbjct: 1662 aactgttcagcagctgaagcgatagcaatc 1633
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>gb|AY105904.1| Zea mays PCO126705 mRNA sequence
          Length = 2579

 Score =  278 bits (140), Expect = 2e-71
 Identities = 290/340 (85%)
 Strand = Plus / Minus

                                                                        
Query: 305  tggacagaattaactactcagtccatgtagcgcccaacatctttgacataaaactgtaac 364
            |||||| |||| |||| |||||||| | ||| || ||||| |||| |||||| || || |
Sbjct: 2288 tggacaaaattcactattcagtccacgaagcccctaacatttttgccataaagctatatc 2229

                                                                        
Query: 365  ggtccgcagcctcatcaatcaattttttagtcggcctgccagctccatgccctgacttgc 424
             ||| ||||| || ||||||| ||||| ||| |||||||||||||||||||||||||| |
Sbjct: 2228 tgtctgcagcttcgtcaatcattttttgagttggcctgccagctccatgccctgacttcc 2169

                                                                        
Query: 425  ggtcaatgcggccaattattgggttggtctgcgggctgttctcaatgctagtgcacaaga 484
            | |||||||| ||||||||||| || ||||||||||||| |||| |||| || |||| ||
Sbjct: 2168 gatcaatgcgaccaattattggattcgtctgcgggctgtcctcagtgctggtacacagga 2109

                                                                        
Query: 485  catgttgcattgtagccaacaacttcagcgagtgcaatggcacaacacggtcatcatgat 544
            |||| ||||  || || || |||||||| || ||||||||||||||||| || |||||||
Sbjct: 2108 catgctgcaaagttgctaataacttcagtgaatgcaatggcacaacacgatcgtcatgat 2049

                                                                        
Query: 545  cagctgtcaacagcatggttgctggatattgacaattatcaccaaagctttgctcccaag 604
            |||||||||||| ||||||||||||||| || || |||| |||| |||||||||||||||
Sbjct: 2048 cagctgtcaacaacatggttgctggatactggcagttattaccagagctttgctcccaag 1989

                                                    
Query: 605  gtctcctcacgttatgaaggggagaatatttgataagcca 644
            ||||||  || |||||||||||||||||||| || |||||
Sbjct: 1988 gtctccgtacattatgaaggggagaatatttaatgagcca 1949
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>ref|XM_549860.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2639

 Score =  272 bits (137), Expect = 1e-69
 Identities = 248/285 (87%)
 Strand = Plus / Minus

                                                                        
Query: 374  cctcatcaatcaattttttagtcggcctgccagctccatgccctgacttgcggtcaatgc 433
            |||||||||||| ||||||||| || ||||||||||||||||||||||||  ||||||||
Sbjct: 2261 cctcatcaatcatttttttagttggtctgccagctccatgccctgacttgacgtcaatgc 2202

                                                                        
Query: 434  ggccaattattgggttggtctgcgggctgttctcaatgctagtgcacaagacatgttgca 493
            | ||||||||||| |||  ||| ||  | | |||||||||||||||||||||||  ||||
Sbjct: 2201 gaccaattattggattgacctgtggtgtatcctcaatgctagtgcacaagacatactgca 2142

                                                                        
Query: 494  ttgtagccaacaacttcagcgagtgcaatggcacaacacggtcatcatgatcagctgtca 553
             ||| || ||||||||||  |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 2141 gtgttgctaacaacttcaatgagtgcaatggcacaacacgatcatcatgatcagcagtca 2082

                                                                        
Query: 554  acagcatggttgctggatattgacaattatcaccaaagctttgctcccaaggtctcctca 613
            |||||||| ||||||| || ||||||   | | |||| ||||||||||||||||||||||
Sbjct: 2081 acagcatgattgctgggtactgacaacagttaacaaaactttgctcccaaggtctcctca 2022

                                                         
Query: 614  cgttatgaaggggagaatatttgataagccagccgaattcttctt 658
            | ||||||||||| ||||||||||||||||||  |||||| ||||
Sbjct: 2021 cattatgaaggggggaatatttgataagccagtggaattcctctt 1977
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>dbj|AK071405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090K22, full
            insert sequence
          Length = 3375

 Score =  272 bits (137), Expect = 1e-69
 Identities = 248/285 (87%)
 Strand = Plus / Minus

                                                                        
Query: 374  cctcatcaatcaattttttagtcggcctgccagctccatgccctgacttgcggtcaatgc 433
            |||||||||||| ||||||||| || ||||||||||||||||||||||||  ||||||||
Sbjct: 2997 cctcatcaatcatttttttagttggtctgccagctccatgccctgacttgacgtcaatgc 2938

                                                                        
Query: 434  ggccaattattgggttggtctgcgggctgttctcaatgctagtgcacaagacatgttgca 493
            | ||||||||||| |||  ||| ||  | | |||||||||||||||||||||||  ||||
Sbjct: 2937 gaccaattattggattgacctgtggtgtatcctcaatgctagtgcacaagacatactgca 2878

                                                                        
Query: 494  ttgtagccaacaacttcagcgagtgcaatggcacaacacggtcatcatgatcagctgtca 553
             ||| || ||||||||||  |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 2877 gtgttgctaacaacttcaatgagtgcaatggcacaacacgatcatcatgatcagcagtca 2818

                                                                        
Query: 554  acagcatggttgctggatattgacaattatcaccaaagctttgctcccaaggtctcctca 613
            |||||||| ||||||| || ||||||   | | |||| ||||||||||||||||||||||
Sbjct: 2817 acagcatgattgctgggtactgacaacagttaacaaaactttgctcccaaggtctcctca 2758

                                                         
Query: 614  cgttatgaaggggagaatatttgataagccagccgaattcttctt 658
            | ||||||||||| ||||||||||||||||||  |||||| ||||
Sbjct: 2757 cattatgaaggggggaatatttgataagccagtggaattcctctt 2713
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 8e-31
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                          
Query: 502    aacaacttcagcgagtgcaatggcacaacacggtcatcatgatcagctgtcaacagcatg 561
              ||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 446465 aacaacttcaatgagtgcaatggcacaacacgatcatcatgatcagcagtcaacagcatg 446406

                                                                          
Query: 562    gttgctggatattgacaattatcaccaaagctttgctcccaaggtctcctcacgttatga 621
               ||||||| || ||||||   | | |||| ||||||||||||||||||||||| ||||||
Sbjct: 446405 attgctgggtactgacaacagttaacaaaactttgctcccaaggtctcctcacattatga 446346

                          
Query: 622    aggggagaatat 633
              ||||| ||||||
Sbjct: 446345 aggggggaatat 446334



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                          
Query: 387    ttttttagtcggcctgccagctccatgccctgacttgcggtcaatgcggccaattattgg 446
              ||||||||| || ||||||||||||||||||||||||  ||||||||| |||||||||||
Sbjct: 447776 ttttttagttggtctgccagctccatgccctgacttgacgtcaatgcgaccaattattgg 447717

                                                       
Query: 447    gttggtctgcgggctgttctcaatgctagtgcacaagacat 487
               |||  ||| ||  | | |||||||||||||||||||||||
Sbjct: 447716 attgacctgtggtgtatcctcaatgctagtgcacaagacat 447676
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score =  143 bits (72), Expect = 8e-31
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                         
Query: 502   aacaacttcagcgagtgcaatggcacaacacggtcatcatgatcagctgtcaacagcatg 561
             ||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 86666 aacaacttcaatgagtgcaatggcacaacacgatcatcatgatcagcagtcaacagcatg 86607

                                                                         
Query: 562   gttgctggatattgacaattatcaccaaagctttgctcccaaggtctcctcacgttatga 621
              ||||||| || ||||||   | | |||| ||||||||||||||||||||||| ||||||
Sbjct: 86606 attgctgggtactgacaacagttaacaaaactttgctcccaaggtctcctcacattatga 86547

                         
Query: 622   aggggagaatat 633
             ||||| ||||||
Sbjct: 86546 aggggggaatat 86535



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 387   ttttttagtcggcctgccagctccatgccctgacttgcggtcaatgcggccaattattgg 446
             ||||||||| || ||||||||||||||||||||||||  ||||||||| |||||||||||
Sbjct: 87977 ttttttagttggtctgccagctccatgccctgacttgacgtcaatgcgaccaattattgg 87918

                                                      
Query: 447   gttggtctgcgggctgttctcaatgctagtgcacaagacat 487
              |||  ||| ||  | | |||||||||||||||||||||||
Sbjct: 87917 attgacctgtggtgtatcctcaatgctagtgcacaagacat 87877
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>gb|BC063222.1| Xenopus tropicalis prolyl endopeptidase, mRNA (cDNA clone MGC:76255
            IMAGE:5379068), complete cds
          Length = 2565

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 615  gttatgaaggggagaatatttgataagcca 644
            ||||||||| ||||||||||||||||||||
Sbjct: 2002 gttatgaagtggagaatatttgataagcca 1973
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>ref|NM_203858.1| Xenopus tropicalis prolyl endopeptidase (prep), mRNA
          Length = 2565

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 615  gttatgaaggggagaatatttgataagcca 644
            ||||||||| ||||||||||||||||||||
Sbjct: 2002 gttatgaagtggagaatatttgataagcca 1973
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 522   tggcacaacacggtcatcatgatca 546
             |||||||||||||||||||||||||
Sbjct: 89428 tggcacaacacggtcatcatgatca 89452
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>ref|NM_001020753.1| Danio rerio zgc:110670 (zgc:110670), mRNA
          Length = 2708

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 514  gagtgcaatggcacaacacggtcatcatgatcagctgtcaaca 556
            |||||||  ||||| |||||||||||||||||| | |||||||
Sbjct: 2031 gagtgcagcggcaccacacggtcatcatgatcaccagtcaaca 1989
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>gb|BC095363.1| Danio rerio zgc:110670, mRNA (cDNA clone MGC:110670 IMAGE:7165918),
            complete cds
          Length = 2708

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 514  gagtgcaatggcacaacacggtcatcatgatcagctgtcaaca 556
            |||||||  ||||| |||||||||||||||||| | |||||||
Sbjct: 2031 gagtgcagcggcaccacacggtcatcatgatcaccagtcaaca 1989
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>gb|BC090517.1| Danio rerio cDNA clone IMAGE:7140031
          Length = 1395

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 514  gagtgcaatggcacaacacggtcatcatgatcagctgtcaaca 556
            |||||||  ||||| |||||||||||||||||| | |||||||
Sbjct: 1184 gagtgcagcggcaccacacggtcatcatgatcaccagtcaaca 1142
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>ref|NM_174772.1| Bos taurus prolyl oligopeptidase (PREP), mRNA
          Length = 2404

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 611  tcacgttatgaaggggagaatatttgataagcca 644
            ||||||| || || ||||||||||||||||||||
Sbjct: 1961 tcacgttgtgcagtggagaatatttgataagcca 1928
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>dbj|AB028866.1| Bos taurus mRNA for prolyl oligopeptidase, complete cds
          Length = 2423

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 611  tcacgttatgaaggggagaatatttgataagcca 644
            ||||||| || || ||||||||||||||||||||
Sbjct: 1980 tcacgttgtgcagtggagaatatttgataagcca 1947
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>emb|AL353717.13| Human DNA sequence from clone RP11-562M8 on chromosome 9 Contains a
             novel pseudogene, a argininosuccinate synthetase (ASS)
             (CTLN1) pseudogene, the APTX gene for aprataxin, a
             transcription elongation factor A (SII), 1 pseudogene
             (GTF2SP) (TCEA1P) and 2 CpG islands, complete sequence
          Length = 120533

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19550 cttccacatatggaagtatatatag 19574



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19515 cttccacatatggaagtatatatag 19539



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19480 cttccacatatggaagtatatatag 19504



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19445 cttccacatatggaagtatatatag 19469



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19410 cttccacatatggaagtatatatag 19434



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19375 cttccacatatggaagtatatatag 19399



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19340 cttccacatatggaagtatatatag 19364



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19305 cttccacatatggaagtatatatag 19329



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19270 cttccacatatggaagtatatatag 19294



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19235 cttccacatatggaagtatatatag 19259



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19200 cttccacatatggaagtatatatag 19224



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19165 cttccacatatggaagtatatatag 19189



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19130 cttccacatatggaagtatatatag 19154



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   cttccacatatggaagaatatatag 139
             |||||||||||||||| ||||||||
Sbjct: 19095 cttccacatatggaagtatatatag 19119
to top
>gb|AY170316.1| Porcine lymphotropic herpesvirus 3 isolate 489 long unique region,
             partial sequence
          Length = 60326

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    caagtttccaacaatattttt 95
             |||||||||||||||||||||
Sbjct: 55632 caagtttccaacaatattttt 55612
to top
>gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162063

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134259 cttccacatatggaagtatatatag 134283



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134224 cttccacatatggaagtatatatag 134248



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134189 cttccacatatggaagtatatatag 134213



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134154 cttccacatatggaagtatatatag 134178



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134119 cttccacatatggaagtatatatag 134143



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134084 cttccacatatggaagtatatatag 134108



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134049 cttccacatatggaagtatatatag 134073



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 134014 cttccacatatggaagtatatatag 134038



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133979 cttccacatatggaagtatatatag 134003



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133944 cttccacatatggaagtatatatag 133968



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133909 cttccacatatggaagtatatatag 133933



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133874 cttccacatatggaagtatatatag 133898



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133839 cttccacatatggaagtatatatag 133863



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133804 cttccacatatggaagtatatatag 133828



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133769 cttccacatatggaagtatatatag 133793



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133734 cttccacatatggaagtatatatag 133758



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133699 cttccacatatggaagtatatatag 133723



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133664 cttccacatatggaagtatatatag 133688



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133629 cttccacatatggaagtatatatag 133653



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133594 cttccacatatggaagtatatatag 133618



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133559 cttccacatatggaagtatatatag 133583



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    cttccacatatggaagaatatatag 139
              |||||||||||||||| ||||||||
Sbjct: 133524 cttccacatatggaagtatatatag 133548
to top
>emb|AL359238.4|CNS05TEP Human chromosome 14 DNA sequence BAC R-452D21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 573    ttgacaattatcaccaaagct 593
              |||||||||||||||||||||
Sbjct: 125164 ttgacaattatcaccaaagct 125144
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>emb|AL831731.6| Mouse DNA sequence from clone RP23-442K11 on chromosome 2, complete
              sequence
          Length = 165232

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    cagaaacacacacccttccac 121
              |||||||||||||||||||||
Sbjct: 127319 cagaaacacacacccttccac 127339
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>gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence
          Length = 200890

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aagtttccaacaatattttt 95
             ||||||||||||||||||||
Sbjct: 27343 aagtttccaacaatattttt 27362
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>gb|AY433117.1| Aedes aegypti ASAP ID: 36447 vesicular transmembrane mRNA
          sequence
          Length = 678

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 79 tttccaacaatatttttcta 98
          ||||||||||||||||||||
Sbjct: 30 tttccaacaatatttttcta 49
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>gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete sequence
          Length = 191467

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    aaacacacacccttccacat 123
              ||||||||||||||||||||
Sbjct: 109525 aaacacacacccttccacat 109506
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>gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complete sequence
          Length = 177736

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   aaacacacacccttccacat 123
             ||||||||||||||||||||
Sbjct: 15821 aaacacacacccttccacat 15802
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>gb|AC107720.16| Mus musculus chromosome 5, clone RP23-188F20, complete sequence
          Length = 206182

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   caacatctttgacataaaac 358
             ||||||||||||||||||||
Sbjct: 85028 caacatctttgacataaaac 85047
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>gb|AY552062.1| Aedes aegypti putative coated vesicle membrane protein mRNA,
          complete cds
          Length = 910

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 79 tttccaacaatatttttcta 98
          ||||||||||||||||||||
Sbjct: 60 tttccaacaatatttttcta 79
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>gb|BC071008.1| Xenopus laevis similar to prolyl endopeptidase, mRNA (cDNA clone
            IMAGE:6317137), partial cds
          Length = 2508

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 508  ttcagcgagtgcaatggcacaacacggtcatcatgatcagctgt 551
            ||||| |||||||| ||||| || ||||||||||| || |||||
Sbjct: 2088 ttcagggagtgcaagggcacgactcggtcatcatggtctgctgt 2045
to top
>gb|BC047161.1| Xenopus laevis similar to prolyl endopeptidase, mRNA (cDNA clone
            IMAGE:4681500), partial cds
          Length = 2505

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 508  ttcagcgagtgcaatggcacaacacggtcatcatgatcagctgt 551
            ||||| |||||||| ||||| || ||||||||||| || |||||
Sbjct: 2082 ttcagggagtgcaagggcacgactcggtcatcatggtctgctgt 2039
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>ref|XM_449941.1| Candida glabrata CBS138 hypothetical protein (CAGL0M13739g) partial
            mRNA
          Length = 2184

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  tcaaagagttgtgatacttg 205
            ||||||||||||||||||||
Sbjct: 1060 tcaaagagttgtgatacttg 1041
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>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence
          Length = 229072

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 618  atgaaggggagaatatttga 637
            ||||||||||||||||||||
Sbjct: 6659 atgaaggggagaatatttga 6678
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>gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete sequence
          Length = 128294

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   gtgcacaagacatgttgcat 494
             ||||||||||||||||||||
Sbjct: 72262 gtgcacaagacatgttgcat 72281
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>emb|BX322532.2| Human DNA sequence from clone RP11-543A11 on chromosome 1 Contains the
             5' end of the gene for a novel protein (FLJ16613) and the
             5' end of one variant of the OPN3 gene for opsin 3
             (encephalopsin, panopsin), complete sequence
          Length = 40220

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    caatatttttctaagcagaaacacacac 113
             ||||||||||||||| ||||| ||||||
Sbjct: 37420 caatatttttctaagtagaaatacacac 37393
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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     tcaaagagttgtgatacttg 205
               ||||||||||||||||||||
Sbjct: 1347355 tcaaagagttgtgatacttg 1347374
to top
>gb|BC098959.1| Xenopus laevis similar to prolyl endopeptidase, mRNA (cDNA clone
            MGC:114639 IMAGE:5074670), complete cds
          Length = 2591

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 508  ttcagcgagtgcaatggcacaacacggtcatcatgatcagctgt 551
            ||||| |||||||| ||||| || ||||||||||| || |||||
Sbjct: 2092 ttcagggagtgcaagggcacgactcggtcatcatggtctgctgt 2049
to top
>gb|AC090999.1| Caenorhabditis elegans cosmid Y82E9BR, complete sequence
          Length = 139291

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    atcaatcaattttttagtcg 397
              ||||||||||||||||||||
Sbjct: 110120 atcaatcaattttttagtcg 110101
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>gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome 13, complete sequence
          Length = 200635

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   tgggttggtctgcgggctgt 463
             ||||||||||||||||||||
Sbjct: 12010 tgggttggtctgcgggctgt 11991
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>gb|AC017109.5| Homo sapiens chromosome 4 clone RP11-568O24, complete sequence
          Length = 195169

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    gaattaactactcagtccat 330
              ||||||||||||||||||||
Sbjct: 187786 gaattaactactcagtccat 187805
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>gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosome 13, complete sequence
          Length = 159755

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 444    tgggttggtctgcgggctgt 463
              ||||||||||||||||||||
Sbjct: 148754 tgggttggtctgcgggctgt 148735
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>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence
          Length = 228458

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  caacatctttgacataaaac 358
            ||||||||||||||||||||
Sbjct: 4931 caacatctttgacataaaac 4912
to top
>gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, complete sequence
          Length = 227676

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   gtaagcttgcaccacacaaacatt 169
             |||||| |||||||||||||||||
Sbjct: 58066 gtaagcctgcaccacacaaacatt 58089
to top
>gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139802

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 305   tggacagaattaactactcagtcc 328
             ||||||||||||| ||||||||||
Sbjct: 20472 tggacagaattaattactcagtcc 20495
to top
>gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 129055

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    cacatatggaagaatatataggct 142
              ||||||||||||||||||| ||||
Sbjct: 114340 cacatatggaagaatatatgggct 114363
to top
>emb|BX641096.1|HSM806926 Homo sapiens mRNA; cDNA DKFZp686N03151 (from clone DKFZp686N03151)
          Length = 4329

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 526 acaacacggtcatcatgatc 545
           ||||||||||||||||||||
Sbjct: 446 acaacacggtcatcatgatc 427
to top
>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete
             sequence
          Length = 307324

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   aaacacacacccttccacat 123
             ||||||||||||||||||||
Sbjct: 50824 aaacacacacccttccacat 50805
to top
>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence
          Length = 179548

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 618   atgaaggggagaatatttga 637
             ||||||||||||||||||||
Sbjct: 27172 atgaaggggagaatatttga 27153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,951,984
Number of Sequences: 3902068
Number of extensions: 5951984
Number of successful extensions: 145647
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145433
Number of HSP's gapped (non-prelim): 205
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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