ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009290.1| Triticum aestivum clone wlm0.pk0024.f11:fis, full... 932 0.0
2gb|AY036608.1| Triticum aestivum thiosulfate transferase mRNA, c... 932 0.0
3ref|XM_464244.1| Oryza sativa (japonica cultivar-group), mRNA 327 3e-86
4dbj|AK066425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 3e-86
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
6dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
7gb|AF109156.1|AF109156 Datisca glomerata thiosulfate sulfurtrans... 48 0.038
8gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome... 42 2.3
9gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, compl... 42 2.3
10gb|AC090239.6| Homo sapiens chromosome 18, clone RP11-746A20, co... 42 2.3
11gb|AC087683.5| Homo sapiens chromosome 18, clone RP11-687E1, com... 42 2.3
12gb|AC069151.6| Homo sapiens BAC clone RP11-236I9 from 2, complet... 42 2.3
13ref|NM_000633.2| Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nucl... 40 9.3
14ref|NM_009741.2| Mus musculus B-cell leukemia/lymphoma 2 (Bcl2),... 40 9.3
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.3
16gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosom... 40 9.3
17gb|AC138208.11| Mus musculus chromosome 1, clone RP23-304E4, com... 40 9.3
18emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on ch... 40 9.3
19gb|BC027258.1| Homo sapiens B-cell CLL/lymphoma 2, transcript va... 40 9.3
20dbj|AK135009.1| Mus musculus adult male olfactory brain cDNA, RI... 40 9.3
21gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
22dbj|AK049473.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 9.3
23gb|BC095964.1| Mus musculus B-cell leukemia/lymphoma 2, mRNA (cD... 40 9.3
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
26gb|L31532.1|MUSBCL22 Mus musculus bcl-2 alpha gene, exon 2 40 9.3
27gb|AY220759.1| Homo sapiens B-cell CLL/lymphoma 2 (BCL2) gene, c... 40 9.3
28gb|AC016240.23| Homo sapiens chromosome 8, clone RP11-27N21, com... 40 9.3
29gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosom... 40 9.3
30gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, com... 40 9.3
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
32emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.3
33emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chr... 40 9.3
34gb|AC022726.13| Homo sapiens chromosome 18, clone RP11-299P2, co... 40 9.3
35emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on ch... 40 9.3
36gb|M13994.1|HUMBCL2A Human B-cell leukemia/lymphoma 2 (bcl-2) pr... 40 9.3
37emb|X06487.1|HSBCL2IG H.sapiens mRNA for bcl2-Ig fusion gene 40 9.3
38gb|M14745.1|HUMBCL2C Human bcl-2 mRNA 40 9.3 
>gb|BT009290.1| Triticum aestivum clone wlm0.pk0024.f11:fis, full insert mRNA
            sequence
          Length = 1352

 Score =  932 bits (470), Expect = 0.0
 Identities = 560/590 (94%)
 Strand = Plus / Minus

                                                                        
Query: 89   ctataacctctgtatcgactttgatgcaaagtttgccaaagggaaatatcattgggctga 148
            ||||||||| ||||| ||||||| | ||||| |||||| || |||||||||||| ||| |
Sbjct: 1157 ctataacctttgtattgactttggtacaaagcttgccacagagaaatatcattgcgctca 1098

                                                                        
Query: 149  caatctgcgctgaatgccgcaggatgcaacagctgcattcatcacctcagagtgacggat 208
            |||||||||||||||||| |||||||  ||||||||||||||||||||||| |||  |||
Sbjct: 1097 caatctgcgctgaatgccacaggatgtgacagctgcattcatcacctcagaatgatcgat 1038

                                                                        
Query: 209  ttaagagccagtggaagtaactattgggtaatcattatctggcagtgcttcccattctgt 268
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1037 ttaagagccagtggaagtaactattgggtaatcattatctggcagcgcttcccattctgt 978

                                                                        
Query: 269  ccaagatccgtcgtaaaccggaacatcatgcttcccaattctatagagccccagcgcaag 328
            |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 977  ccaagatccgtcgtaaaccggaacgtcatgcttcccaattctataaagccccagggcaag 918

                                                                        
Query: 329  tatgcaggcagttacaccagatgcacatgtgaggacaatcgggtgatcaagggaaatgcc 388
            |||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 917  tatgcatgcagttacaccagatgcacatgtgaggacaatcgggccatcaagggaaatgcc 858

                                                                        
Query: 389  tgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatcaga 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857  tgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatcaga 798

                                                                        
Query: 449  catctcagggaatggaacacatacagttccaggtatatgcccacttcttactccttccct 508
            |||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||
Sbjct: 797  catctcagggaacggaacacatttagttccaggtatatgcccacttctaactccttccct 738

                                                                        
Query: 509  tggttctggcatcacaccatcaaatctgccctttactcgggcatcaactacttggtgagc 568
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737  tggttctggcattacaccatcaaatctgccctttactcgggcatcaactacttggtgagc 678

                                                                        
Query: 569  cttagcagctacattgtgtttgaccttttctagtgtccacaatagctgatgtcgaaactg 628
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 677  cttagcagctacattgtgtttgaccttttctagtgcccacaatagctgatgtcgaaactc 618

                                                              
Query: 629  tgtctgaaatgtgacagcatttgccaattcaccattataagctgtttcaa 678
            ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 617  tgtctgaaatgtggcagcatttgccaattcaccattataagctgtttcaa 568
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>gb|AY036608.1| Triticum aestivum thiosulfate transferase mRNA, complete cds
          Length = 1290

 Score =  932 bits (470), Expect = 0.0
 Identities = 560/590 (94%)
 Strand = Plus / Minus

                                                                        
Query: 89   ctataacctctgtatcgactttgatgcaaagtttgccaaagggaaatatcattgggctga 148
            ||||||||| ||||| ||||||| | ||||| |||||| || |||||||||||| ||  |
Sbjct: 1125 ctataacctttgtattgactttggtacaaagcttgccacagagaaatatcattgcgccca 1066

                                                                        
Query: 149  caatctgcgctgaatgccgcaggatgcaacagctgcattcatcacctcagagtgacggat 208
            |||||||||||||||||| |||||||  ||||||||||||||||||||||| |||  |||
Sbjct: 1065 caatctgcgctgaatgccacaggatgtgacagctgcattcatcacctcagaatgatcgat 1006

                                                                        
Query: 209  ttaagagccagtggaagtaactattgggtaatcattatctggcagtgcttcccattctgt 268
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1005 ttaagagccagtggaagtaactattgggtaatcattatctggcagcgcttcccattctgt 946

                                                                        
Query: 269  ccaagatccgtcgtaaaccggaacatcatgcttcccaattctatagagccccagcgcaag 328
            |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 945  ccaagatccgtcgtaaaccggaacgtcatgcttcccaattctataaagccccagggcaag 886

                                                                        
Query: 329  tatgcaggcagttacaccagatgcacatgtgaggacaatcgggtgatcaagggaaatgcc 388
            |||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 885  tatgcatgcagttacaccagatgcacatgtgaggacaatcgggccatcaagggaaatgcc 826

                                                                        
Query: 389  tgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatcaga 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825  tgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatcaga 766

                                                                        
Query: 449  catctcagggaatggaacacatacagttccaggtatatgcccacttcttactccttccct 508
            |||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||
Sbjct: 765  catctcagggaacggaacacatttagttccaggtatatgcccacttctaactccttccct 706

                                                                        
Query: 509  tggttctggcatcacaccatcaaatctgccctttactcgggcatcaactacttggtgagc 568
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705  tggttctggcattacaccatcaaatctgccctttactcgggcatcaactacttggtgagc 646

                                                                        
Query: 569  cttagcagctacattgtgtttgaccttttctagtgtccacaatagctgatgtcgaaactg 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 645  cttagcagctacattgtgtttgaccttttctagtgtccacaatagctgatgtcgaaactc 586

                                                              
Query: 629  tgtctgaaatgtgacagcatttgccaattcaccattataagctgtttcaa 678
            ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 585  tgtctgaaatgtggcagcatttgccaattcaccattataagctgtttcaa 536
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>ref|XM_464244.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1243

 Score =  327 bits (165), Expect = 3e-86
 Identities = 387/461 (83%)
 Strand = Plus / Minus

                                                                        
Query: 208  tttaagagccagtggaagtaactattgggtaatcattatctggcagtgcttcccattctg 267
            ||||||| ||| |||| |||||| |||| ||||||| ||| || || |||||||||||||
Sbjct: 1015 tttaagaaccattggaggtaacttttggataatcatgatccggtagagcttcccattctg 956

                                                                        
Query: 268  tccaagatccgtcgtaaaccggaacatcatgcttcccaattctatagagccccagcgcaa 327
            |||||||||| || ||||| |||| ||| |||||||||||||||||||| ||||  ||||
Sbjct: 955  tccaagatccatcataaactggaatatcttgcttcccaattctatagagtcccaaagcaa 896

                                                                        
Query: 328  gtatgcaggcagttacaccagatgcacatgtgaggacaatcgggtgatcaagggaaatgc 387
            ||||||||||||||||||||||| |||| ||||  ||||| ||| |||||||||| || |
Sbjct: 895  gtatgcaggcagttacaccagatccacaagtgactacaatggggcgatcaagggatatcc 836

                                                                        
Query: 388  ctgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatcag 447
            |||||||||| |||||||||   | ||||||||||||||| ||| || ||||| ||||| 
Sbjct: 835  ctgcttgctcaaactttttacggatctcatctgcagggagaagcattggtgcatcatcaa 776

                                                                        
Query: 448  acatctcagggaatggaacacatacagttccaggtatatgcccacttcttactccttccc 507
            |||||||| ||||||||||||||   || || || ||||| |||||||||||||||||||
Sbjct: 775  acatctcaaggaatggaacacattttgtccctgggatatgtccacttcttactccttccc 716

                                                                        
Query: 508  ttggttctggcatcacaccatcaaatctgccctttactcgggcatcaactacttggtgag 567
             |||||||||    |||||||||||||||||||||  |||||||||||| ||||||||||
Sbjct: 715  gtggttctggtgctacaccatcaaatctgccctttgatcgggcatcaacgacttggtgag 656

                                                                        
Query: 568  ccttagcagctacattgtgtttgaccttttctagtgtccacaatagctgatgtcgaaact 627
             ||  ||| | |  || ||||| ||||||||||||||||| ||||  ||| |  |||| |
Sbjct: 655  actgtgcatccatgttatgtttaaccttttctagtgtccagaatatatgaggctgaaatt 596

                                                     
Query: 628  gtgtctgaaatgtgacagcatttgccaattcaccattataa 668
              ||||||||||| ||| || |||||| || ||||||||||
Sbjct: 595  cagtctgaaatgttacatcacttgccagttgaccattataa 555
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>dbj|AK066425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065E05, full
            insert sequence
          Length = 1243

 Score =  327 bits (165), Expect = 3e-86
 Identities = 387/461 (83%)
 Strand = Plus / Minus

                                                                        
Query: 208  tttaagagccagtggaagtaactattgggtaatcattatctggcagtgcttcccattctg 267
            ||||||| ||| |||| |||||| |||| ||||||| ||| || || |||||||||||||
Sbjct: 1015 tttaagaaccattggaggtaacttttggataatcatgatccggtagagcttcccattctg 956

                                                                        
Query: 268  tccaagatccgtcgtaaaccggaacatcatgcttcccaattctatagagccccagcgcaa 327
            |||||||||| || ||||| |||| ||| |||||||||||||||||||| ||||  ||||
Sbjct: 955  tccaagatccatcataaactggaatatcttgcttcccaattctatagagtcccaaagcaa 896

                                                                        
Query: 328  gtatgcaggcagttacaccagatgcacatgtgaggacaatcgggtgatcaagggaaatgc 387
            ||||||||||||||||||||||| |||| ||||  ||||| ||| |||||||||| || |
Sbjct: 895  gtatgcaggcagttacaccagatccacaagtgactacaatggggcgatcaagggatatcc 836

                                                                        
Query: 388  ctgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatcag 447
            |||||||||| |||||||||   | ||||||||||||||| ||| || ||||| ||||| 
Sbjct: 835  ctgcttgctcaaactttttacggatctcatctgcagggagaagcattggtgcatcatcaa 776

                                                                        
Query: 448  acatctcagggaatggaacacatacagttccaggtatatgcccacttcttactccttccc 507
            |||||||| ||||||||||||||   || || || ||||| |||||||||||||||||||
Sbjct: 775  acatctcaaggaatggaacacattttgtccctgggatatgtccacttcttactccttccc 716

                                                                        
Query: 508  ttggttctggcatcacaccatcaaatctgccctttactcgggcatcaactacttggtgag 567
             |||||||||    |||||||||||||||||||||  |||||||||||| ||||||||||
Sbjct: 715  gtggttctggtgctacaccatcaaatctgccctttgatcgggcatcaacgacttggtgag 656

                                                                        
Query: 568  ccttagcagctacattgtgtttgaccttttctagtgtccacaatagctgatgtcgaaact 627
             ||  ||| | |  || ||||| ||||||||||||||||| ||||  ||| |  |||| |
Sbjct: 655  actgtgcatccatgttatgtttaaccttttctagtgtccagaatatatgaggctgaaatt 596

                                                     
Query: 628  gtgtctgaaatgtgacagcatttgccaattcaccattataa 668
              ||||||||||| ||| || |||||| || ||||||||||
Sbjct: 595  cagtctgaaatgttacatcacttgccagttgaccattataa 555
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  105 bits (53), Expect = 2e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                           
Query: 208     tttaagagccagtggaagtaactattgggtaatcattatctggcagtgcttcccattctg 267
               ||||||| ||| |||| |||||| |||| ||||||| ||| || || |||||||||||||
Sbjct: 3613759 tttaagaaccattggaggtaacttttggataatcatgatccggtagagcttcccattctg 3613700

                                                                
Query: 268     tccaagatccgtcgtaaaccggaacatcatgcttcccaattctatagag 316
               |||||||||| || ||||| |||| ||| ||||||||||||||||||||
Sbjct: 3613699 tccaagatccatcataaactggaatatcttgcttcccaattctatagag 3613651



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                           
Query: 324     gcaagtatgcaggcagttacaccagatgcacatgtgaggacaatcgggtgatcaagggaa 383
               ||||||||||||||||||||||||||| |||| ||||  ||||| ||| |||||||||| 
Sbjct: 3613569 gcaagtatgcaggcagttacaccagatccacaagtgactacaatggggcgatcaagggat 3613510

                       
Query: 384     atgcctgc 391
               || |||||
Sbjct: 3613509 atccctgc 3613502



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                           
Query: 452     ctcagggaatggaacacatacagttccaggtatatgcccacttcttactccttcccttgg 511
               |||| ||||||||||||||   || || || ||||| ||||||||||||||||||| |||
Sbjct: 3613138 ctcaaggaatggaacacattttgtccctgggatatgtccacttcttactccttcccgtgg 3613079

                                         
Query: 512     ttctggcatcacaccatcaaatctgc 537
               ||||||    ||||||||||||||||
Sbjct: 3613078 ttctggtgctacaccatcaaatctgc 3613053



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                           
Query: 387     cctgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatca 446
               ||||||||||| |||||||||   | ||||||||||||||| ||| || ||||| |||||
Sbjct: 3613291 cctgcttgctcaaactttttacggatctcatctgcagggagaagcattggtgcatcatca 3613232

                      
Query: 447     gacatct 453
                ||||||
Sbjct: 3613231 aacatct 3613225



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 534     ctgccctttactcgggcatcaactacttggtgag 567
               |||||||||  |||||||||||| ||||||||||
Sbjct: 3612860 ctgccctttgatcgggcatcaacgacttggtgag 3612827



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 589     tgaccttttctagtgtccacaata 612
               ||||||||||||||||||| ||||
Sbjct: 3612569 tgaccttttctagtgtccagaata 3612546
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0085K21
          Length = 180714

 Score =  105 bits (53), Expect = 2e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                         
Query: 208   tttaagagccagtggaagtaactattgggtaatcattatctggcagtgcttcccattctg 267
             ||||||| ||| |||| |||||| |||| ||||||| ||| || || |||||||||||||
Sbjct: 95049 tttaagaaccattggaggtaacttttggataatcatgatccggtagagcttcccattctg 94990

                                                              
Query: 268   tccaagatccgtcgtaaaccggaacatcatgcttcccaattctatagag 316
             |||||||||| || ||||| |||| ||| ||||||||||||||||||||
Sbjct: 94989 tccaagatccatcataaactggaatatcttgcttcccaattctatagag 94941



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 324   gcaagtatgcaggcagttacaccagatgcacatgtgaggacaatcgggtgatcaagggaa 383
             ||||||||||||||||||||||||||| |||| ||||  ||||| ||| |||||||||| 
Sbjct: 94859 gcaagtatgcaggcagttacaccagatccacaagtgactacaatggggcgatcaagggat 94800

                     
Query: 384   atgcctgc 391
             || |||||
Sbjct: 94799 atccctgc 94792



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 452   ctcagggaatggaacacatacagttccaggtatatgcccacttcttactccttcccttgg 511
             |||| ||||||||||||||   || || || ||||| ||||||||||||||||||| |||
Sbjct: 94428 ctcaaggaatggaacacattttgtccctgggatatgtccacttcttactccttcccgtgg 94369

                                       
Query: 512   ttctggcatcacaccatcaaatctgc 537
             ||||||    ||||||||||||||||
Sbjct: 94368 ttctggtgctacaccatcaaatctgc 94343



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 387   cctgcttgctcgaactttttagatagctcatctgcagggaggagcgtttgtgcaccatca 446
             ||||||||||| |||||||||   | ||||||||||||||| ||| || ||||| |||||
Sbjct: 94581 cctgcttgctcaaactttttacggatctcatctgcagggagaagcattggtgcatcatca 94522

                    
Query: 447   gacatct 453
              ||||||
Sbjct: 94521 aacatct 94515



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 534   ctgccctttactcgggcatcaactacttggtgag 567
             |||||||||  |||||||||||| ||||||||||
Sbjct: 94150 ctgccctttgatcgggcatcaacgacttggtgag 94117



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 589   tgaccttttctagtgtccacaata 612
             ||||||||||||||||||| ||||
Sbjct: 93859 tgaccttttctagtgtccagaata 93836
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>gb|AF109156.1|AF109156 Datisca glomerata thiosulfate sulfurtransferase (TST) mRNA, complete
            cds
          Length = 1343

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                        
Query: 253  gtgcttcccattctgtccaagatccgtcgtaaaccggaacatcatgcttcccaattctat 312
            ||||| ||||||| ||||||||||| |||||||| | |||||||   |||||||  | ||
Sbjct: 1168 gtgctccccattcagtccaagatccatcgtaaactgcaacatcagatttcccaagccgat 1109

                                                
Query: 313  agagccccagcgcaagtatgcaggcagttacaccag 348
             ||| ||||  || || ||||||||||| |||||||
Sbjct: 1108 ggagacccaatgcgagaatgcaggcagtaacaccag 1073
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>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence
          Length = 176949

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   gactttgatgcaaagtttgcc 125
             |||||||||||||||||||||
Sbjct: 31696 gactttgatgcaaagtttgcc 31716
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>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence
          Length = 186217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    gactttgatgcaaagtttgcc 125
              |||||||||||||||||||||
Sbjct: 166686 gactttgatgcaaagtttgcc 166706
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>gb|AC090239.6| Homo sapiens chromosome 18, clone RP11-746A20, complete sequence
          Length = 184635

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 459  aatggaacacatacagttcca 479
            |||||||||||||||||||||
Sbjct: 8999 aatggaacacatacagttcca 8979
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>gb|AC087683.5| Homo sapiens chromosome 18, clone RP11-687E1, complete sequence
          Length = 181036

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 459   aatggaacacatacagttcca 479
             |||||||||||||||||||||
Sbjct: 76245 aatggaacacatacagttcca 76265
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>gb|AC069151.6| Homo sapiens BAC clone RP11-236I9 from 2, complete sequence
          Length = 37694

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 476  tccaggtatatgcccacttcttact 500
            |||||| ||||||||||||||||||
Sbjct: 4071 tccaggaatatgcccacttcttact 4095
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>ref|NM_000633.2| Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding
            mitochondrial protein, transcript variant alpha, mRNA
          Length = 6492

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 1418 tgccaaagggaaatatcatt 1437
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>ref|NM_009741.2| Mus musculus B-cell leukemia/lymphoma 2 (Bcl2), transcript variant 1,
            mRNA
          Length = 6961

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 2100 tgccaaagggaaatatcatt 2119
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 392      ttgctcgaactttttagata 411
                ||||||||||||||||||||
Sbjct: 10111952 ttgctcgaactttttagata 10111933
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>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence
          Length = 224904

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tgccaaagggaaatatcatt 141
              ||||||||||||||||||||
Sbjct: 139717 tgccaaagggaaatatcatt 139698
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>gb|AC138208.11| Mus musculus chromosome 1, clone RP23-304E4, complete sequence
          Length = 166332

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgccaaagggaaatatcatt 141
             ||||||||||||||||||||
Sbjct: 23009 tgccaaagggaaatatcatt 22990
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>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the
              Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic
              acid oxidase, a novel gene (LOC327969), the 5' end of the
              Sez6 gene for seizure related gene 6 and two CpG islands,
              complete sequence
          Length = 220176

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 406    tagatagctcatctgcaggg 425
              ||||||||||||||||||||
Sbjct: 141117 tagatagctcatctgcaggg 141098
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>gb|BC027258.1| Homo sapiens B-cell CLL/lymphoma 2, transcript variant alpha, mRNA
            (cDNA clone MGC:21366 IMAGE:4511027), complete cds
          Length = 2704

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 1314 tgccaaagggaaatatcatt 1333
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>dbj|AK135009.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430541F16 product:pipecolic acid
            oxidase, full insert sequence
          Length = 3710

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  tagatagctcatctgcaggg 425
            ||||||||||||||||||||
Sbjct: 1369 tagatagctcatctgcaggg 1388
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>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0078C05, complete sequence
          Length = 122116

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   ttgctcgaactttttagata 411
             ||||||||||||||||||||
Sbjct: 57573 ttgctcgaactttttagata 57554
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>dbj|AK049473.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430015F12 product:B-cell
            leukemia/lymphoma 2, full insert sequence
          Length = 2354

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 2315 tgccaaagggaaatatcatt 2334
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>gb|BC095964.1| Mus musculus B-cell leukemia/lymphoma 2, mRNA (cDNA clone MGC:106289
            IMAGE:6306635), complete cds
          Length = 3324

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 1977 tgccaaagggaaatatcatt 1996
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 485      atgcccacttcttactccttcccttggttctggcatcacaccatcaaatctg 536
                |||||||||||||| ||||| || ||| ||||| |   ||||||||||||||
Sbjct: 25736871 atgcccacttcttattcctttccgtggctctggaactgcaccatcaaatctg 25736922
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 392      ttgctcgaactttttagata 411
                ||||||||||||||||||||
Sbjct: 10110073 ttgctcgaactttttagata 10110054
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>gb|L31532.1|MUSBCL22 Mus musculus bcl-2 alpha gene, exon 2
          Length = 5806

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tgccaaagggaaatatcatt 141
           ||||||||||||||||||||
Sbjct: 728 tgccaaagggaaatatcatt 747
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>gb|AY220759.1| Homo sapiens B-cell CLL/lymphoma 2 (BCL2) gene, complete cds
          Length = 198051

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tgccaaagggaaatatcatt 141
              ||||||||||||||||||||
Sbjct: 191441 tgccaaagggaaatatcatt 191460
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>gb|AC016240.23| Homo sapiens chromosome 8, clone RP11-27N21, complete sequence
          Length = 167578

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    tttagatagctcatctgcag 423
              ||||||||||||||||||||
Sbjct: 146513 tttagatagctcatctgcag 146532
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>gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosome 6, complete sequence
          Length = 197171

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 490    cacttcttactccttccctt 509
              ||||||||||||||||||||
Sbjct: 110567 cacttcttactccttccctt 110586
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>gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, complete sequence
          Length = 225976

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgccaaagggaaatatcatt 141
             ||||||||||||||||||||
Sbjct: 26114 tgccaaagggaaatatcatt 26095
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 485      atgcccacttcttactccttcccttggttctggcatcacaccatcaaatctg 536
                |||||||||||||| ||||| || ||| ||||| |   ||||||||||||||
Sbjct: 25665047 atgcccacttcttattcctttccgtggctctggaactgcaccatcaaatctg 25665098
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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                  
Query: 485    atgcccacttcttactccttcccttggttctggcatcacaccatcaaatctg 536
              |||||||||||||| ||||| || ||| ||||| |   ||||||||||||||
Sbjct: 104109 atgcccacttcttattcctttccgtggctctggaactgcaccatcaaatctg 104160
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>emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chromosome 2, complete
             sequence
          Length = 224044

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   ctacttggtgagccttagca 575
             ||||||||||||||||||||
Sbjct: 51362 ctacttggtgagccttagca 51343
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>gb|AC022726.13| Homo sapiens chromosome 18, clone RP11-299P2, complete sequence
          Length = 146688

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tgccaaagggaaatatcatt 141
              ||||||||||||||||||||
Sbjct: 127534 tgccaaagggaaatatcatt 127553
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>emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on chromosome 4, complete
              sequence
          Length = 186276

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gatgcaaagtttgccaaagg 130
              ||||||||||||||||||||
Sbjct: 137510 gatgcaaagtttgccaaagg 137491
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>gb|M13994.1|HUMBCL2A Human B-cell leukemia/lymphoma 2 (bcl-2) proto-oncogene mRNA encoding
            bcl-2-alpha protein, complete cds
          Length = 5086

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 2383 tgccaaagggaaatatcatt 2402
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>emb|X06487.1|HSBCL2IG H.sapiens mRNA for bcl2-Ig fusion gene
          Length = 1846

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  tgccaaagggaaatatcatt 141
            ||||||||||||||||||||
Sbjct: 1811 tgccaaagggaaatatcatt 1830
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>gb|M14745.1|HUMBCL2C Human bcl-2 mRNA
          Length = 6030

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tgccaaagggaaatatcatt 141
           ||||||||||||||||||||
Sbjct: 956 tgccaaagggaaatatcatt 975


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,081,572
Number of Sequences: 3902068
Number of extensions: 5081572
Number of successful extensions: 100483
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100294
Number of HSP's gapped (non-prelim): 177
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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