ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PTFLB_ECOLI (P32154) Fructose-like PTS system EIIBC component [I... 30 9.1

>PTFLB_ECOLI (P32154) Fructose-like PTS system EIIBC component [Includes:|
           Fructose-like phosphotransferase enzyme IIB component
           (EC 2.7.1.69) (PTS system fructose-like EIIB component);
           Fructose-like permease IIC component (PTS system
           fructose-like EIIC co
          Length = 483

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 286 GPMQHTAWWLHFFFLEKHRVDYWEGLLG 203
           GP+  TAW+  F  LEKH  D W  ++G
Sbjct: 321 GPINKTAWFFCFSLLEKHIYD-WYAIVG 347


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,474,217
Number of Sequences: 219361
Number of extensions: 2225369
Number of successful extensions: 5411
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5409
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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