ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017795.1| Zea mays clone EL01N0505B10.c mRNA sequence 216 7e-53
2dbj|AK066566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 7e-53
3gb|AY109557.1| Zea mays CL38845_1 mRNA sequence 200 4e-48
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
6dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosom... 46 0.15
8gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete... 44 0.61
9gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell... 44 0.61
10gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14... 44 0.61
11gb|AC124225.13| Mus musculus chromosome 16, clone RP23-83P23, co... 44 0.61
12gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
14ref|NM_102773.2| Arabidopsis thaliana unknown protein AT1G30360 ... 40 9.5
15gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, com... 40 9.5
16gb|AY763328.1| Oreochromis niloticus clone NTSII40.5 nontranscri... 40 9.5
17emb|Z81143.1|CEZK265 Caenorhabditis elegans Cosmid ZK265, comple... 40 9.5
18gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome... 40 9.5
19gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complet... 40 9.5
20gb|AY035092.1| Arabidopsis thaliana unknown protein (At1g30360) ... 40 9.5
21emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, ... 40 9.5
22emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.5
23emb|BX548071.7| Zebrafish DNA sequence from clone DKEY-25L23 in ... 40 9.5
24gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cance... 40 9.5
25gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, com... 40 9.5
26gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, compl... 40 9.5
27dbj|AK221977.1| Arabidopsis thaliana mRNA for ERD4 protein, part... 40 9.5
28gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36... 40 9.5
29ref|NM_059848.3| Caenorhabditis elegans ZK265.7 (ZK265.7) mRNA, ... 40 9.5
30gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's H... 40 9.5
31gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, r... 40 9.5
32gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K... 40 9.5
33gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosom... 40 9.5
34dbj|AB039928.1| Arabidopsis thaliana mRNA for ERD4 protein, part... 40 9.5
35gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clon... 40 9.5
36dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, ... 40 9.5
37emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010 40 9.5
38emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from ... 40 9.5
39gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65... 40 9.5
40gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complet... 40 9.5
41emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from... 40 9.5
42gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosom... 40 9.5 
>gb|BT017795.1| Zea mays clone EL01N0505B10.c mRNA sequence
          Length = 1184

 Score =  216 bits (109), Expect = 7e-53
 Identities = 208/241 (86%)
 Strand = Plus / Minus

                                                                       
Query: 426 atcatgtggttggtctggtcatagtagatagaccccggcctcccatgggaaccataccag 485
           |||||||||||||||||||||| || || ||||||||||||||||||||| |||| ||| 
Sbjct: 558 atcatgtggttggtctggtcattgttgaaagaccccggcctcccatgggagccatgccat 499

                                                                       
Query: 486 gaagccccagctcaggctcatcatcattcacttcttcaccagattcggcgccagcaatcc 545
           ||||  |||  ||| |||||||||||||    |||||||||||||| ||||||||||| |
Sbjct: 498 gaagatccacatcaagctcatcatcatttgtatcttcaccagattcagcgccagcaattc 439

                                                                       
Query: 546 caatgcaggcaaatagagaggaatcgtcaactttcaagtgctcgtatgcaagatataagt 605
           ||||||| ||||| | ||| ||||||||||||||||  ||||| ||||||||||| |  |
Sbjct: 438 caatgcaagcaaacaaagaagaatcgtcaactttcagatgctcatatgcaagatacagat 379

                                                                       
Query: 606 cctcaattgtggcactttcatacaatgtcgtcaattccttaatacaggatatatcctttc 665
           |||||||||||||||||||||| ||||||||||||||| | || || |||| ||||||||
Sbjct: 378 cctcaattgtggcactttcatataatgtcgtcaattccctgatgcatgatacatcctttc 319

            
Query: 666 t 666
           |
Sbjct: 318 t 318
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>dbj|AK066566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O18, full
            insert sequence
          Length = 3520

 Score =  216 bits (109), Expect = 7e-53
 Identities = 232/273 (84%)
 Strand = Plus / Minus

                                                                        
Query: 422  agaaatcatgtggttggtctggtcatagtagatagaccccggcctcccatgggaaccata 481
            |||||||||||||||||||||||||| || |||||||| |||||||| || ||| |||| 
Sbjct: 3029 agaaatcatgtggttggtctggtcattgttgatagaccacggcctccaataggacccatg 2970

                                                                        
Query: 482  ccaggaagccccagctcaggctcatcatcattcacttcttcaccagattcggcgccagca 541
            ||| | || ||||  ||  ||||||||||| ||   ||||| |||||||| || ||||||
Sbjct: 2969 ccatgcaggcccatatcgagctcatcatcagtcgtctcttcgccagattcagcaccagca 2910

                                                                        
Query: 542  atcccaatgcaggcaaatagagaggaatcgtcaactttcaagtgctcgtatgcaagatat 601
            ||||||||||| ||||| | ||| || || |||||||| | |||||| ||||||||||| 
Sbjct: 2909 atcccaatgcaagcaaacaaagaagattcatcaacttttaggtgctcatatgcaagatac 2850

                                                                        
Query: 602  aagtcctcaattgtggcactttcatacaatgtcgtcaattccttaatacaggatatatcc 661
            ||||||||||| |||||||||||||||||  ||||||||||||| || |||||||| |||
Sbjct: 2849 aagtcctcaatcgtggcactttcatacaacatcgtcaattccttgatgcaggatatttcc 2790

                                             
Query: 662  tttctcggcacggatgcagactgcaggtgggct 694
            ||||| ||||| |||| ||||||||| ||||||
Sbjct: 2789 tttctaggcacagatgaagactgcagatgggct 2757
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>gb|AY109557.1| Zea mays CL38845_1 mRNA sequence
          Length = 964

 Score =  200 bits (101), Expect = 4e-48
 Identities = 206/241 (85%)
 Strand = Plus / Plus

                                                                       
Query: 426 atcatgtggttggtctggtcatagtagatagaccccggcctcccatgggaaccataccag 485
           |||||||||||||||||||||| || || ||||||||||||||||||||| |||| ||| 
Sbjct: 621 atcatgtggttggtctggtcattgttgaaagaccccggcctcccatgggacccatgccat 680

                                                                       
Query: 486 gaagccccagctcaggctcatcatcattcacttcttcaccagattcggcgccagcaatcc 545
           ||||  |||  |||||||| ||||| ||    |||||||||||||| |||||||||||||
Sbjct: 681 gaagatccacatcaggctcgtcatcgtttgtatcttcaccagattcagcgccagcaatcc 740

                                                                       
Query: 546 caatgcaggcaaatagagaggaatcgtcaactttcaagtgctcgtatgcaagatataagt 605
           ||||||| ||||| | ||| |||||||||||||||| |||||| ||||||| ||| |  |
Sbjct: 741 caatgcaagcaaacaaagaagaatcgtcaactttcaggtgctcatatgcaatatacagat 800

                                                                       
Query: 606 cctcaattgtggcactttcatacaatgtcgtcaattccttaatacaggatatatcctttc 665
           ||||||| || ||| ||||||| ||||||||||||||||| || || |||| ||||||||
Sbjct: 801 cctcaatcgttgcattttcatataatgtcgtcaattccttgatgcatgatacatcctttc 860

            
Query: 666 t 666
           |
Sbjct: 861 t 861
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                            
Query: 518      tcttcaccagattcggcgccagcaatcccaatgcaggcaaatagagaggaatcgtcaact 577
                ||||| |||||||| || ||||||||||||||||| ||||| | ||| || || ||||||
Sbjct: 24817555 tcttcgccagattcagcaccagcaatcccaatgcaagcaaacaaagaagattcatcaact 24817614

                                                                            
Query: 578      ttcaagtgctcgtatgcaagatataagtcctcaattgtggcactttcatacaatgtcgtc 637
                || | |||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||
Sbjct: 24817615 tttaggtgctcatatgcaagatacaagtcctcaatcgtggcactttcatacaacatcgtc 24817674

                                         
Query: 638      aattccttaatacaggatatatcct 662
                |||||||| || |||||||| ||||
Sbjct: 24817675 aattccttgatgcaggatatttcct 24817699



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 422      agaaatcatgtggttggtctggtcatagtagatagaccccggcctcc 468
                |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 24817263 agaaatcatgtggttggtctggtcattgttgatagaccacggcctcc 24817309
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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0072A21
          Length = 158287

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                         
Query: 518   tcttcaccagattcggcgccagcaatcccaatgcaggcaaatagagaggaatcgtcaact 577
             ||||| |||||||| || ||||||||||||||||| ||||| | ||| || || ||||||
Sbjct: 28638 tcttcgccagattcagcaccagcaatcccaatgcaagcaaacaaagaagattcatcaact 28697

                                                                         
Query: 578   ttcaagtgctcgtatgcaagatataagtcctcaattgtggcactttcatacaatgtcgtc 637
             || | |||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||
Sbjct: 28698 tttaggtgctcatatgcaagatacaagtcctcaatcgtggcactttcatacaacatcgtc 28757

                                      
Query: 638   aattccttaatacaggatatatcct 662
             |||||||| || |||||||| ||||
Sbjct: 28758 aattccttgatgcaggatatttcct 28782



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 422   agaaatcatgtggttggtctggtcatagtagatagaccccggcctcc 468
             |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 28346 agaaatcatgtggttggtctggtcattgttgatagaccacggcctcc 28392
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>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0029G06
          Length = 169711

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                          
Query: 518    tcttcaccagattcggcgccagcaatcccaatgcaggcaaatagagaggaatcgtcaact 577
              ||||| |||||||| || ||||||||||||||||| ||||| | ||| || || ||||||
Sbjct: 151236 tcttcgccagattcagcaccagcaatcccaatgcaagcaaacaaagaagattcatcaact 151295

                                                                          
Query: 578    ttcaagtgctcgtatgcaagatataagtcctcaattgtggcactttcatacaatgtcgtc 637
              || | |||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||
Sbjct: 151296 tttaggtgctcatatgcaagatacaagtcctcaatcgtggcactttcatacaacatcgtc 151355

                                       
Query: 638    aattccttaatacaggatatatcct 662
              |||||||| || |||||||| ||||
Sbjct: 151356 aattccttgatgcaggatatttcct 151380



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 422    agaaatcatgtggttggtctggtcatagtagatagaccccggcctcc 468
              |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 150944 agaaatcatgtggttggtctggtcattgttgatagaccacggcctcc 150990
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>gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosome 16, complete
             sequence
          Length = 180726

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 117   ctcaaagaatccctagttacaagttacaaca 147
             |||||||| |||| |||||||||||||||||
Sbjct: 68524 ctcaaagattccccagttacaagttacaaca 68554
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>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence
          Length = 182468

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 378    ggagctatgttgataccttgaa 399
              ||||||||||||||||||||||
Sbjct: 133231 ggagctatgttgataccttgaa 133252
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>gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174373

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 378    ggagctatgttgataccttgaa 399
              ||||||||||||||||||||||
Sbjct: 140959 ggagctatgttgataccttgaa 140938
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>gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14 of 83 of the complete
              sequence
          Length = 311933

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 378    ggagctatgttgataccttgaa 399
              ||||||||||||||||||||||
Sbjct: 238757 ggagctatgttgataccttgaa 238736
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>gb|AC124225.13| Mus musculus chromosome 16, clone RP23-83P23, complete sequence
          Length = 157891

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 152    aggaacctgcaagaatcaaatc 173
              ||||||||||||||||||||||
Sbjct: 103015 aggaacctgcaagaatcaaatc 103036
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
             complete sequence
          Length = 149870

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   gttacaagttacaacaaccga 152
             |||||||||||||||||||||
Sbjct: 91915 gttacaagttacaacaaccga 91935
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 132      gttacaagttacaacaaccga 152
                |||||||||||||||||||||
Sbjct: 20093590 gttacaagttacaacaaccga 20093610
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>ref|NM_102773.2| Arabidopsis thaliana unknown protein AT1G30360 mRNA, complete cds
          Length = 2600

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  agttacaagttacaacaacc 150
            ||||||||||||||||||||
Sbjct: 2542 agttacaagttacaacaacc 2523
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>gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, complete sequence
          Length = 161617

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    atagaaatcatgtggttggt 439
              ||||||||||||||||||||
Sbjct: 159036 atagaaatcatgtggttggt 159055
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>gb|AY763328.1| Oreochromis niloticus clone NTSII40.5 nontranscribed intergenic
           spacer, partial sequence
          Length = 157

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 546 caatgcaggcaaatagagaggaat 569
           ||||||||||||| ||||||||||
Sbjct: 94  caatgcaggcaaacagagaggaat 117
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>emb|Z81143.1|CEZK265 Caenorhabditis elegans Cosmid ZK265, complete sequence
          Length = 36069

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   ttacaacaaccgaggaacct 159
             ||||||||||||||||||||
Sbjct: 29767 ttacaacaaccgaggaacct 29786
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>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence
          Length = 159785

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    caataaagatcccctcttca 377
              ||||||||||||||||||||
Sbjct: 105253 caataaagatcccctcttca 105234
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>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence
          Length = 220167

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   atagaaatcatgtggttggt 439
             ||||||||||||||||||||
Sbjct: 88714 atagaaatcatgtggttggt 88733
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>gb|AY035092.1| Arabidopsis thaliana unknown protein (At1g30360) mRNA, complete cds
          Length = 2416

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  agttacaagttacaacaacc 150
            ||||||||||||||||||||
Sbjct: 2359 agttacaagttacaacaacc 2340
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>emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 52
          Length = 198427

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    agttacaagttacaacaacc 150
              ||||||||||||||||||||
Sbjct: 102694 agttacaagttacaacaacc 102713
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>emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BAC clone F1C12 (ESSA project)
          Length = 111945

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   agttacaagttacaacaacc 150
             ||||||||||||||||||||
Sbjct: 35271 agttacaagttacaacaacc 35290
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>emb|BX548071.7| Zebrafish DNA sequence from clone DKEY-25L23 in linkage group 9,
             complete sequence
          Length = 223099

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tgtcatcctaccttcttcaa 112
             ||||||||||||||||||||
Sbjct: 83738 tgtcatcctaccttcttcaa 83719
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>gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   tgtggcactttcatacaatg 632
             ||||||||||||||||||||
Sbjct: 60105 tgtggcactttcatacaatg 60124
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>gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, complete sequence
          Length = 210723

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    acaatgacctgtgctactta 54
             ||||||||||||||||||||
Sbjct: 96067 acaatgacctgtgctactta 96048
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>gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, complete sequence
          Length = 156623

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    acaatgacctgtgctactta 54
             ||||||||||||||||||||
Sbjct: 25421 acaatgacctgtgctactta 25402
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>dbj|AK221977.1| Arabidopsis thaliana mRNA for ERD4 protein, partial cds, clone:
           RAFL22-58-C09
          Length = 801

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 agttacaagttacaacaacc 150
           ||||||||||||||||||||
Sbjct: 752 agttacaagttacaacaacc 733
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>gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone
            BACR06C11, complete sequence
          Length = 174500

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 604  gtcctcaattgtggcactttcata 627
            |||| |||||||||||||||||||
Sbjct: 1217 gtccccaattgtggcactttcata 1240
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>ref|NM_059848.3| Caenorhabditis elegans ZK265.7 (ZK265.7) mRNA, complete cds
          Length = 1386

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 ttacaacaaccgaggaacct 159
           ||||||||||||||||||||
Sbjct: 416 ttacaacaaccgaggaacct 435
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>gb|AC129342.5| Rattus norvegicus  BAC CH230-229B21 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 224257

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    tcatcatcattcacttcttc 522
              ||||||||||||||||||||
Sbjct: 173145 tcatcatcattcacttcttc 173164
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>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone
              BACR48K02, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 604    gtcctcaattgtggcactttcata 627
              |||| |||||||||||||||||||
Sbjct: 157800 gtccccaattgtggcactttcata 157823
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>gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K22 genomic sequence, complete
             sequence
          Length = 82281

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   agttacaagttacaacaacc 150
             ||||||||||||||||||||
Sbjct: 37948 agttacaagttacaacaacc 37967
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>gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosome ul, complete sequence
          Length = 233533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 673    ggatgcagactgcaggtggg 692
              ||||||||||||||||||||
Sbjct: 150875 ggatgcagactgcaggtggg 150894
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>dbj|AB039928.1| Arabidopsis thaliana mRNA for ERD4 protein, partial cds
          Length = 2099

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  agttacaagttacaacaacc 150
            ||||||||||||||||||||
Sbjct: 2062 agttacaagttacaacaacc 2043
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>gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clone PAC P704-39J11, complete
              sequence
          Length = 161121

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    tcctcaattgtggcactttc 624
              ||||||||||||||||||||
Sbjct: 128600 tcctcaattgtggcactttc 128619
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>dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, map 22, complete
              sequences
          Length = 214189

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    tcctcaattgtggcactttc 624
              ||||||||||||||||||||
Sbjct: 163197 tcctcaattgtggcactttc 163216
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>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    tcctcaattgtggcactttc 624
              ||||||||||||||||||||
Sbjct: 332357 tcctcaattgtggcactttc 332376
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>emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from BAC 139I22 map 3q21 region
             D3S3607-D3S1587, complete sequence
          Length = 184983

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   tgtggcactttcatacaatg 632
             ||||||||||||||||||||
Sbjct: 37644 tgtggcactttcatacaatg 37663
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>gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65 of 83 of the complete
             sequence
          Length = 251192

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 604   gtcctcaattgtggcactttcata 627
             |||| |||||||||||||||||||
Sbjct: 31714 gtccccaattgtggcactttcata 31737
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>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence
          Length = 166132

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   caataaagatcccctcttca 377
             ||||||||||||||||||||
Sbjct: 38302 caataaagatcccctcttca 38283
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>emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from PAC RPCI-1 152M24 map 21q21
             region D21S189-LA297, complete sequence
          Length = 116137

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   tcctcaattgtggcactttc 624
             ||||||||||||||||||||
Sbjct: 90136 tcctcaattgtggcactttc 90155
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>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 439    tctggtcatagtagatagac 458
              ||||||||||||||||||||
Sbjct: 110122 tctggtcatagtagatagac 110103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,504,367
Number of Sequences: 3902068
Number of extensions: 5504367
Number of successful extensions: 89327
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89198
Number of HSP's gapped (non-prelim): 126
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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