ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18f20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507305.1| PREDICTED Oryza sativa (japonica cultivar-group... 490 e-135
2ref|XM_483502.1| Oryza sativa (japonica cultivar-group), mRNA 490 e-135
3dbj|AK105383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 490 e-135
4dbj|AK073679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 490 e-135
5gb|BT016449.1| Zea mays clone Contig282 mRNA sequence 456 e-125
6gb|AY105272.1| Zea mays PCO090198 mRNA sequence 448 e-123
7gb|AY106901.1| Zea mays PCO090197 mRNA sequence 416 e-113
8gb|BT017794.1| Zea mays clone EL01N0504H02.c mRNA sequence 408 e-111
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
10dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
11gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 123 7e-25
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
13gb|DQ099084.1| Arachis stenosperma clone AS1RN13D04 microsatelli... 84 6e-13
14ref|NM_111647.3| Arabidopsis thaliana protein carrier AT3G07680 ... 56 1e-04
15gb|BT015477.1| Arabidopsis thaliana At3g07680 mRNA sequence 56 1e-04
16gb|AY040079.1| Arabidopsis thaliana putative coated vesicle memb... 56 1e-04
17gb|AF360268.1| Arabidopsis thaliana putative coated vesicle memb... 56 1e-04
18emb|BX822735.1|CNS0A603 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
19emb|BX824623.1|CNS0A5N4 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
20gb|AY088581.1| Arabidopsis thaliana clone 8095 mRNA, complete se... 56 1e-04
21emb|BX822157.1|CNS0A63Z Arabidopsis thaliana Full-length cDNA Co... 48 0.032
22emb|AL929470.20| Human DNA sequence from clone RP11-72M14 on chr... 46 0.13
23dbj|AK093528.1| Homo sapiens cDNA FLJ36209 fis, clone THYMU2000022 46 0.13
24gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complet... 46 0.13
25gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome ... 44 0.49
26gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosom... 44 0.49
27gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone ... 44 0.49
28gb|AY297781.1| Alcaligenes faecalis strain NCIB 8687 arsenite ox... 42 2.0
29dbj|AK222535.1| Homo sapiens mRNA for formyltetrahydrofolate deh... 42 2.0
30ref|XM_472105.1| Oryza sativa (japonica cultivar-group), predic... 40 7.7
31gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
32gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete... 40 7.7
33gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete se... 40 7.7
34gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 7.7
35gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold 40 7.7
36gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 7.7
37dbj|AB169462.1| Macaca fascicularis testis cDNA, clone: QtsA-210... 40 7.7
38gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, compl... 40 7.7
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
41gb|AC064870.5| Homo sapiens BAC clone RP11-575E20 from 2, comple... 40 7.7
42gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 40 7.7
43gb|AC004952.2|AC004952 Homo sapiens PAC clone RP5-1032D7 from 7p... 40 7.7
44gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, c... 40 7.7
45emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-8... 40 7.7
46emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4,... 40 7.7
47emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4,... 40 7.7
48gb|AC171635.3| Rhesus Macaque CHR21 BAC CH250-374E17 (Children's... 40 7.7
49emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chr... 40 7.7
50gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7 
>ref|XM_507305.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.27 mRNA
          Length = 946

 Score =  490 bits (247), Expect = e-135
 Identities = 391/439 (89%)
 Strand = Plus / Minus

                                                                       
Query: 131 agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
           ||||||| |||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||
Sbjct: 781 agaccctggatgtccccaacttgcgctcaaagaggcggcgcaatagatagacttgaatga 722

                                                                       
Query: 191 cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
           |||| |||| ||| ||||| || ||||| || || ||||||||||  |||||||||||||
Sbjct: 721 cgctagctgcaatcagcgctgctgactccaatagagccttgtggacagccctcctgctca 662

                                                                       
Query: 251 tgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaact 310
           |||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 661 tgttttcgttcaatatagcttgtcggtcagtttgggcctctagccagtgctgctcgaact 602

                                                                       
Query: 311 gaatgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgtt 370
           ||||||||||||| ||||||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 601 gaatgttgtaaagcgcttcatctaattttgctatttgttcaaacaaaggagcaaaatgtt 542

                                                                       
Query: 371 catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
           ||||||| |||||||||||||| |||||| |||| ||||||||||| || || ||||  |
Sbjct: 541 catctttcgcatgctgatcaaagtacgaaaaatggccaacatgcacatcaaaatctacag 482

                                                                       
Query: 431 tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
           |||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 481 tttcatggtatggggatttattggtgaagcagaagcgatgtacgcctctcttctgaacta 422

                                                                       
Query: 491 tgaactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaat 550
           |||||||||| || |||||||| |||||||||||||| |||||||| || ||||||| ||
Sbjct: 421 tgaactcaaacttatcactagtcttgtcacgagaatcacggacttgagcaccattaggat 362

                              
Query: 551 ctttaaccacaagatccac 569
           | |||||||||||||||||
Sbjct: 361 ccttaaccacaagatccac 343
to top
>ref|XM_483502.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 920

 Score =  490 bits (247), Expect = e-135
 Identities = 391/439 (89%)
 Strand = Plus / Minus

                                                                       
Query: 131 agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
           ||||||| |||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||
Sbjct: 665 agaccctggatgtccccaacttgcgctcaaagaggcggcgcaatagatagacttgaatga 606

                                                                       
Query: 191 cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
           |||| |||| ||| ||||| || ||||| || || ||||||||||  |||||||||||||
Sbjct: 605 cgctagctgcaatcagcgctgctgactccaatagagccttgtggacagccctcctgctca 546

                                                                       
Query: 251 tgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaact 310
           |||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 545 tgttttcgttcaatatagcttgtcggtcagtttgggcctctagccagtgctgctcgaact 486

                                                                       
Query: 311 gaatgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgtt 370
           ||||||||||||| ||||||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 485 gaatgttgtaaagcgcttcatctaattttgctatttgttcaaacaaaggagcaaaatgtt 426

                                                                       
Query: 371 catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
           ||||||| |||||||||||||| |||||| |||| ||||||||||| || || ||||  |
Sbjct: 425 catctttcgcatgctgatcaaagtacgaaaaatggccaacatgcacatcaaaatctacag 366

                                                                       
Query: 431 tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
           |||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 365 tttcatggtatggggatttattggtgaagcagaagcgatgtacgcctctcttctgaacta 306

                                                                       
Query: 491 tgaactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaat 550
           |||||||||| || |||||||| |||||||||||||| |||||||| || ||||||| ||
Sbjct: 305 tgaactcaaacttatcactagtcttgtcacgagaatcacggacttgagcaccattaggat 246

                              
Query: 551 ctttaaccacaagatccac 569
           | |||||||||||||||||
Sbjct: 245 ccttaaccacaagatccac 227
to top
>dbj|AK105383.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C01, full
           insert sequence
          Length = 920

 Score =  490 bits (247), Expect = e-135
 Identities = 391/439 (89%)
 Strand = Plus / Minus

                                                                       
Query: 131 agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
           ||||||| |||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||
Sbjct: 665 agaccctggatgtccccaacttgcgctcaaagaggcggcgcaatagatagacttgaatga 606

                                                                       
Query: 191 cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
           |||| |||| ||| ||||| || ||||| || || ||||||||||  |||||||||||||
Sbjct: 605 cgctagctgcaatcagcgctgctgactccaatagagccttgtggacagccctcctgctca 546

                                                                       
Query: 251 tgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaact 310
           |||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 545 tgttttcgttcaatatagcttgtcggtcagtttgggcctctagccagtgctgctcgaact 486

                                                                       
Query: 311 gaatgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgtt 370
           ||||||||||||| ||||||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 485 gaatgttgtaaagcgcttcatctaattttgctatttgttcaaacaaaggagcaaaatgtt 426

                                                                       
Query: 371 catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
           ||||||| |||||||||||||| |||||| |||| ||||||||||| || || ||||  |
Sbjct: 425 catctttcgcatgctgatcaaagtacgaaaaatggccaacatgcacatcaaaatctacag 366

                                                                       
Query: 431 tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
           |||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 365 tttcatggtatggggatttattggtgaagcagaagcgatgtacgcctctcttctgaacta 306

                                                                       
Query: 491 tgaactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaat 550
           |||||||||| || |||||||| |||||||||||||| |||||||| || ||||||| ||
Sbjct: 305 tgaactcaaacttatcactagtcttgtcacgagaatcacggacttgagcaccattaggat 246

                              
Query: 551 ctttaaccacaagatccac 569
           | |||||||||||||||||
Sbjct: 245 ccttaaccacaagatccac 227
to top
>dbj|AK073679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050B05, full
           insert sequence
          Length = 947

 Score =  490 bits (247), Expect = e-135
 Identities = 391/439 (89%)
 Strand = Plus / Minus

                                                                       
Query: 131 agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
           ||||||| |||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||
Sbjct: 781 agaccctggatgtccccaacttgcgctcaaagaggcggcgcaatagatagacttgaatga 722

                                                                       
Query: 191 cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
           |||| |||| ||| ||||| || ||||| || || ||||||||||  |||||||||||||
Sbjct: 721 cgctagctgcaatcagcgctgctgactccaatagagccttgtggacagccctcctgctca 662

                                                                       
Query: 251 tgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaact 310
           |||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 661 tgttttcgttcaatatagcttgtcggtcagtttgggcctctagccagtgctgctcgaact 602

                                                                       
Query: 311 gaatgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgtt 370
           ||||||||||||| ||||||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 601 gaatgttgtaaagcgcttcatctaattttgctatttgttcaaacaaaggagcaaaatgtt 542

                                                                       
Query: 371 catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
           ||||||| |||||||||||||| |||||| |||| ||||||||||| || || ||||  |
Sbjct: 541 catctttcgcatgctgatcaaagtacgaaaaatggccaacatgcacatcaaaatctacag 482

                                                                       
Query: 431 tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
           |||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 481 tttcatggtatggggatttattggtgaagcagaagcgatgtacgcctctcttctgaacta 422

                                                                       
Query: 491 tgaactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaat 550
           |||||||||| || |||||||| |||||||||||||| |||||||| || ||||||| ||
Sbjct: 421 tgaactcaaacttatcactagtcttgtcacgagaatcacggacttgagcaccattaggat 362

                              
Query: 551 ctttaaccacaagatccac 569
           | |||||||||||||||||
Sbjct: 361 ccttaaccacaagatccac 343
to top
>gb|BT016449.1| Zea mays clone Contig282 mRNA sequence
          Length = 1023

 Score =  456 bits (230), Expect = e-125
 Identities = 383/434 (88%)
 Strand = Plus / Plus

                                                                       
Query: 133 accctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatgacg 192
           |||||||| ||||||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 215 accctagacgtccccagcttgcgctcgaagagccggcgcaggagatagacctggatgacg 274

                                                                       
Query: 193 ctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctcatg 252
           ||||| |  || || || ||||||||||| |||||||||||||  |||||||||||||||
Sbjct: 275 ctggccgcgatcagtgccgccgactcgaagagtgccttgtggactgccctcctgctcatg 334

                                                                       
Query: 253 ttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaactga 312
           |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 335 ttctcgttcaatattgcttgacggtcagtttgggcctctagccagtgctgttcaaactgg 394

                                                                       
Query: 313 atgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttca 372
           || ||||||||||| ||||||||||| || ||||| || || |  |||| |||||| |||
Sbjct: 395 atattgtaaagtgcctcatctaacttggctatttgctcgaaaagtggtgcaaaatgctca 454

                                                                       
Query: 373 tctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatggtt 432
           |||||||||||||| || || || ||| |||| ||||||||||||||||||||||| |||
Sbjct: 455 tctttggcatgctgctcgaagtatgaaaaatggccaacatgcacgtcgaagtctatagtt 514

                                                                       
Query: 433 tcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaactatg 492
           ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 515 tcgtggtacggggatttattcgtgaagcagaagcgatggacgcctctcttctgaactatg 574

                                                                       
Query: 493 aactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaatct 552
           |||||||| || |||||||| || || |||||||| |||||||| || ||||||| ||| 
Sbjct: 575 aactcaaacttatcactagtcttatctcgagaatcacggacttgagcgccattaggatcc 634

                         
Query: 553 ttaaccacaagatc 566
           ||||||||||||||
Sbjct: 635 ttaaccacaagatc 648
to top
>gb|AY105272.1| Zea mays PCO090198 mRNA sequence
          Length = 1288

 Score =  448 bits (226), Expect = e-123
 Identities = 382/434 (88%)
 Strand = Plus / Minus

                                                                        
Query: 133  accctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatgacg 192
            |||||||| ||||||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 1065 accctagacgtccccagcttgcgctcgaagagccggcgcaggagatagacctggatgacg 1006

                                                                        
Query: 193  ctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctcatg 252
            |||||    || || || ||||||||||| |||||||||||||  |||||||||||||||
Sbjct: 1005 ctggccacgatcagtgccgccgactcgaagagtgccttgtggactgccctcctgctcatg 946

                                                                        
Query: 253  ttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaactga 312
            |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 945  ttctcgttcaatattgcttgacggtcagtttgggcctctagccagtgctgttcaaactgg 886

                                                                        
Query: 313  atgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttca 372
            || ||||||||||| ||||||||||| || ||||| || || |  |||| |||||| |||
Sbjct: 885  atattgtaaagtgcctcatctaacttggctatttgctcgaaaagtggtgcaaaatgctca 826

                                                                        
Query: 373  tctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatggtt 432
            |||||||||||||| || || || ||| |||| ||||||||||||||||||||||| |||
Sbjct: 825  tctttggcatgctgctcgaagtatgaaaaatggccaacatgcacgtcgaagtctatagtt 766

                                                                        
Query: 433  tcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaactatg 492
            ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 765  tcgtggtacggggatttattcgtgaagcagaagcgatggacgcctctcttctgaactatg 706

                                                                        
Query: 493  aactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaatct 552
            |||||||| || |||||||| || || |||||||| |||||||| || ||||||| ||| 
Sbjct: 705  aactcaaacttatcactagtcttatctcgagaatcacggacttgagcgccattaggatcc 646

                          
Query: 553  ttaaccacaagatc 566
            ||||||||||||||
Sbjct: 645  ttaaccacaagatc 632
to top
>gb|AY106901.1| Zea mays PCO090197 mRNA sequence
          Length = 999

 Score =  416 bits (210), Expect = e-113
 Identities = 378/434 (87%)
 Strand = Plus / Minus

                                                                       
Query: 133 accctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatgacg 192
           |||| ||| ||||||||||||||||||||||| ||||| || || |||||||| ||||||
Sbjct: 825 acccgagacgtccccagcttgcgctcgaagagccggcgcaggaggtagacttggatgacg 766

                                                                       
Query: 193 ctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctcatg 252
           ||||| |  || ||||| || |||||||| || ||||| ||||  |||||||||||||||
Sbjct: 765 ctggcggcgatcagcgccgctgactcgaagagcgccttatggactgccctcctgctcatg 706

                                                                       
Query: 253 ttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaactga 312
           |||||||||||||||||||| ||||| || |||||||||||||||||||| || ||||||
Sbjct: 705 ttctcgttcaatattgcttgacggtcagtctgggcctctagccagtgctgttcgaactga 646

                                                                       
Query: 313 atgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttca 372
           || ||||||||||| ||||| |||||  | ||||| ||||| |  |||| |||||| |||
Sbjct: 645 atattgtaaagtgcctcatccaacttgcctatttgctcaaaaagtggtgcaaaatgctca 586

                                                                       
Query: 373 tctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatggtt 432
           |||||||||||||| || ||||| ||| |||| |||||||| || ||||||||||| |||
Sbjct: 585 tctttggcatgctgctcgaaatatgaaaaatggccaacatgaacatcgaagtctatcgtt 526

                                                                       
Query: 433 tcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaactatg 492
           ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 525 tcgtgatatggggatttgttcgtgaagcagaagcgatggacgcctctcttctgaactatg 466

                                                                       
Query: 493 aactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaatct 552
           |||||||| ||||||||||| || || || ||||| |||||||| || ||||||| ||| 
Sbjct: 465 aactcaaacttgtcactagtcttatctcgggaatcacggacttgagcgccattaggatcc 406

                         
Query: 553 ttaaccacaagatc 566
           ||||||||||||||
Sbjct: 405 ttaaccacaagatc 392
to top
>gb|BT017794.1| Zea mays clone EL01N0504H02.c mRNA sequence
          Length = 1153

 Score =  408 bits (206), Expect = e-111
 Identities = 377/434 (86%)
 Strand = Plus / Minus

                                                                       
Query: 133 accctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatgacg 192
           |||| ||| ||||||||||||||||||||||| ||||| || || |||||||| ||||||
Sbjct: 836 acccgagacgtccccagcttgcgctcgaagagccggcgcaggaggtagacttggatgacg 777

                                                                       
Query: 193 ctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctcatg 252
           ||||| |  || ||||| || |||||||| || ||||| ||||  |||||||||||||||
Sbjct: 776 ctggcggcgatcagcgccgctgactcgaagagcgccttatggactgccctcctgctcatg 717

                                                                       
Query: 253 ttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaactga 312
           |||||||||||||||||||| ||||| || |||||||||||||||||||| || ||||||
Sbjct: 716 ttctcgttcaatattgcttgacggtcagtctgggcctctagccagtgctgttcgaactga 657

                                                                       
Query: 313 atgttgtaaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttca 372
           || || |||||||| ||||| |||||  | ||||| ||||| |  |||| |||||| |||
Sbjct: 656 atattataaagtgcctcatccaacttgcctatttgctcaaaaagtggtgcaaaatgctca 597

                                                                       
Query: 373 tctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatggtt 432
           |||||||||||||| || ||||| ||| |||| |||||||| || ||||||||||| |||
Sbjct: 596 tctttggcatgctgctcgaaatatgaaaaatggccaacatgaacatcgaagtctatcgtt 537

                                                                       
Query: 433 tcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaactatg 492
           ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 536 tcgtgatatggggatttgttcgtgaagcagaagcgatggacgcctctcttctgaactatg 477

                                                                       
Query: 493 aactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaatct 552
           |||||||| ||||||||||| || || || ||||| |||||||| || ||||||| ||| 
Sbjct: 476 aactcaaacttgtcactagtcttatctcgggaatcacggacttgagcgccattaggatcc 417

                         
Query: 553 ttaaccacaagatc 566
           ||||||||||||||
Sbjct: 416 ttaaccacaagatc 403
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  206 bits (104), Expect = 6e-50
 Identities = 167/188 (88%)
 Strand = Plus / Plus

                                                                            
Query: 371      catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
                ||||||| |||||||||||||| |||||| |||| ||||||||||| || || ||||  |
Sbjct: 26553154 catctttcgcatgctgatcaaagtacgaaaaatggccaacatgcacatcaaaatctacag 26553213

                                                                            
Query: 431      tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
                |||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 26553214 tttcatggtatggggatttattggtgaagcagaagcgatgtacgcctctcttctgaacta 26553273

                                                                            
Query: 491      tgaactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaat 550
                |||||||||| || |||||||| |||||||||||||| |||||||| || ||||||| ||
Sbjct: 26553274 tgaactcaaacttatcactagtcttgtcacgagaatcacggacttgagcaccattaggat 26553333

                        
Query: 551      ctttaacc 558
                | ||||||
Sbjct: 26553334 ccttaacc 26553341



 Score =  145 bits (73), Expect = 2e-31
 Identities = 100/109 (91%)
 Strand = Plus / Plus

                                                                            
Query: 263      atattgcttgccggtcggtttgggcctctagccagtgctgctcaaactgaatgttgtaaa 322
                |||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 26552963 atatagcttgtcggtcagtttgggcctctagccagtgctgctcgaactgaatgttgtaaa 26553022

                                                                 
Query: 323      gtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttc 371
                | ||||||||||| ||||| ||||||||||||||||| | |||||||||
Sbjct: 26553023 gcgcttcatctaattttgctatttgttcaaacaaaggagcaaaatgttc 26553071



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/132 (86%)
 Strand = Plus / Plus

                                                                            
Query: 131      agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
                ||||||| |||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||
Sbjct: 26551922 agaccctggatgtccccaacttgcgctcaaagaggcggcgcaatagatagacttgaatga 26551981

                                                                            
Query: 191      cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
                |||| |||| ||| ||||| || ||||| || || ||||||||||  |||||||||||||
Sbjct: 26551982 cgctagctgcaatcagcgctgctgactccaatagagccttgtggacagccctcctgctca 26552041

                            
Query: 251      tgttctcgttca 262
                |||| |||||||
Sbjct: 26552042 tgttttcgttca 26552053
to top
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0702E04
          Length = 190948

 Score =  206 bits (104), Expect = 6e-50
 Identities = 167/188 (88%)
 Strand = Plus / Plus

                                                                          
Query: 371    catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
              ||||||| |||||||||||||| |||||| |||| ||||||||||| || || ||||  |
Sbjct: 102021 catctttcgcatgctgatcaaagtacgaaaaatggccaacatgcacatcaaaatctacag 102080

                                                                          
Query: 431    tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
              |||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 102081 tttcatggtatggggatttattggtgaagcagaagcgatgtacgcctctcttctgaacta 102140

                                                                          
Query: 491    tgaactcaaatttgtcactagttttgtcacgagaatctcggacttgggctccattagaat 550
              |||||||||| || |||||||| |||||||||||||| |||||||| || ||||||| ||
Sbjct: 102141 tgaactcaaacttatcactagtcttgtcacgagaatcacggacttgagcaccattaggat 102200

                      
Query: 551    ctttaacc 558
              | ||||||
Sbjct: 102201 ccttaacc 102208



 Score =  145 bits (73), Expect = 2e-31
 Identities = 100/109 (91%)
 Strand = Plus / Plus

                                                                          
Query: 263    atattgcttgccggtcggtttgggcctctagccagtgctgctcaaactgaatgttgtaaa 322
              |||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 101830 atatagcttgtcggtcagtttgggcctctagccagtgctgctcgaactgaatgttgtaaa 101889

                                                               
Query: 323    gtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttc 371
              | ||||||||||| ||||| ||||||||||||||||| | |||||||||
Sbjct: 101890 gcgcttcatctaattttgctatttgttcaaacaaaggagcaaaatgttc 101938



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/132 (86%)
 Strand = Plus / Plus

                                                                          
Query: 131    agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
              ||||||| |||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||
Sbjct: 100789 agaccctggatgtccccaacttgcgctcaaagaggcggcgcaatagatagacttgaatga 100848

                                                                          
Query: 191    cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
              |||| |||| ||| ||||| || ||||| || || ||||||||||  |||||||||||||
Sbjct: 100849 cgctagctgcaatcagcgctgctgactccaatagagccttgtggacagccctcctgctca 100908

                          
Query: 251    tgttctcgttca 262
              |||| |||||||
Sbjct: 100909 tgttttcgttca 100920
to top
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score =  123 bits (62), Expect = 7e-25
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                          
Query: 263    atattgcttgccggtcggtttgggcctctagccagtgctgctcaaactgaatgttgtaaa 322
              |||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||| |
Sbjct: 103534 atattgcttgccggtctgtttgggcctccaaccagtgctgttcaaactgaatgttgtaga 103593

                                                
Query: 323    gtgcttcatctaactttgcaatttgttcaaacaa 356
              | |||||||| |||||||||||||| ||||||||
Sbjct: 103594 gggcttcatccaactttgcaatttgctcaaacaa 103627



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                          
Query: 371    catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
              |||||||||||||||| ||| |||||||| | || | |||| | || || || ||||  |
Sbjct: 103719 catctttggcatgctggtcataatacgaaaagtgactaacaagtacatcaaaatctacag 103778

                                                                          
Query: 431    tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
              |||| || ||||||||||||||||||||||||||||| || || |||||| | |||||||
Sbjct: 103779 tttcatggtatggggatttattggtgaagcagaagcggtgaacgcctctcctatgaacta 103838

                        
Query: 491    tgaactcaaa 500
              |||| |||||
Sbjct: 103839 tgaattcaaa 103848



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Plus

                                                                          
Query: 131    agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
              ||||||| ||||| |||||||| ||||| ||||| ||  | || || ||||| || |  |
Sbjct: 102985 agaccctcgatgttcccagctttcgctcaaagaggcgatgcagtaggtagacctgcacaa 103044

                                                                          
Query: 191    cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
              | ||||||| |||||| ||||| || || || | ||||||||| |  |||||||| ||||
Sbjct: 103045 cactggctgcaatgagagcagctgattcaaagaatgccttgtgaactgccctcctactca 103104

                        
Query: 251    tgttctcgtt 260
              ||||||||||
Sbjct: 103105 tgttctcgtt 103114
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  123 bits (62), Expect = 7e-25
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                            
Query: 263      atattgcttgccggtcggtttgggcctctagccagtgctgctcaaactgaatgttgtaaa 322
                |||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||| |
Sbjct: 19384308 atattgcttgccggtctgtttgggcctccaaccagtgctgttcaaactgaatgttgtaga 19384367

                                                  
Query: 323      gtgcttcatctaactttgcaatttgttcaaacaa 356
                | |||||||| |||||||||||||| ||||||||
Sbjct: 19384368 gggcttcatccaactttgcaatttgctcaaacaa 19384401



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                            
Query: 371      catctttggcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatgg 430
                |||||||||||||||| ||| |||||||| | || | |||| | || || || ||||  |
Sbjct: 19384493 catctttggcatgctggtcataatacgaaaagtgactaacaagtacatcaaaatctacag 19384552

                                                                            
Query: 431      tttcgtgatatggggatttattggtgaagcagaagcgatggacacctctcttctgaacta 490
                |||| || ||||||||||||||||||||||||||||| || || |||||| | |||||||
Sbjct: 19384553 tttcatggtatggggatttattggtgaagcagaagcggtgaacgcctctcctatgaacta 19384612

                          
Query: 491      tgaactcaaa 500
                |||| |||||
Sbjct: 19384613 tgaattcaaa 19384622



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Plus

                                                                            
Query: 131      agaccctagatgtccccagcttgcgctcgaagagtcggcgtagcagatagacttgaatga 190
                ||||||| ||||| |||||||| ||||| ||||| ||  | || || ||||| || |  |
Sbjct: 19383759 agaccctcgatgttcccagctttcgctcaaagaggcgatgcagtaggtagacctgcacaa 19383818

                                                                            
Query: 191      cgctggctgtaatgagcgcagccgactcgaaaagtgccttgtggatggccctcctgctca 250
                | ||||||| |||||| ||||| || || || | ||||||||| |  |||||||| ||||
Sbjct: 19383819 cactggctgcaatgagagcagctgattcaaagaatgccttgtgaactgccctcctactca 19383878

                          
Query: 251      tgttctcgtt 260
                ||||||||||
Sbjct: 19383879 tgttctcgtt 19383888
to top
>gb|DQ099084.1| Arachis stenosperma clone AS1RN13D04 microsatellite sequence
          Length = 701

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 165/206 (80%)
 Strand = Plus / Minus

                                                                       
Query: 259 ttcaatattgcttgccggtcggtttgggcctctagccagtgctgctcaaactgaatgttg 318
           |||| ||||||||| ||||| || || ||||| | ||| ||||| |||||||||||||||
Sbjct: 600 ttcactattgcttggcggtcagtctgtgcctccaaccaatgctgttcaaactgaatgttg 541

                                                                       
Query: 319 taaagtgcttcatctaactttgcaatttgttcaaacaaaggtgaaaaatgttcatctttg 378
           ||||| ||||| || ||||||   || || || | ||||||    ||||||||||| |||
Sbjct: 540 taaagagcttcctccaacttttgtatctgctccagcaaagggttgaaatgttcatccttg 481

                                                                       
Query: 379 gcatgctgatcaaaatacgaataatgtccaacatgcacgtcgaagtctatggtttcgtga 438
           ||||| || ||||| || ||  | ||||| ||||| || ||||| || ||||||||||||
Sbjct: 480 gcatgttgctcaaagtaagagaagtgtccgacatgtacatcgaaatcgatggtttcgtga 421

                                     
Query: 439 tatggggatttattggtgaagcagaa 464
           || || || || ||| ||||||||||
Sbjct: 420 taaggagacttgttgttgaagcagaa 395
to top
>ref|NM_111647.3| Arabidopsis thaliana protein carrier AT3G07680 mRNA, complete cds
          Length = 1021

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 678 tgctcatgttctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 619

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 618 caaattggatgttgtaaagagcctcctctaactttg 583
to top
>gb|BT015477.1| Arabidopsis thaliana At3g07680 mRNA sequence
          Length = 564

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 448 tgctcatgttctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 389

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 388 caaattggatgttgtaaagagcctcctctaactttg 353
to top
>gb|AY040079.1| Arabidopsis thaliana putative coated vesicle membrane protein
           (At3g07680) mRNA, complete cds
          Length = 627

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 511 tgctcatgttctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 452

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 451 caaattggatgttgtaaagagcctcctctaactttg 416
to top
>gb|AF360268.1| Arabidopsis thaliana putative coated vesicle membrane protein
           (At3g07680) mRNA, complete cds
          Length = 897

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 648 tgctcatgttctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 589

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 588 caaattggatgttgtaaagagcctcctctaactttg 553
to top
>emb|BX822735.1|CNS0A603 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZC05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 413

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 127 tgctcatgttctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 68

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 67  caaattggatgttgtaaagagcctcctctaactttg 32
to top
>emb|BX824623.1|CNS0A5N4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH60ZB11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 895

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 678 tgctcatgttctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 619

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 618 caaattggatgttgtaaagagcctcctctaactttg 583
to top
>gb|AY088581.1| Arabidopsis thaliana clone 8095 mRNA, complete sequence
          Length = 856

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||||||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 664 tgctcatgttctcgttcacgatggcttgacgatcggtctgagcttctaaccaatgttgtt 605

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 604 caaattggatgttgtaaagagcctcctctaactttg 569
to top
>emb|BX822157.1|CNS0A63Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB16ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 872

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                       
Query: 245 tgctcatgttctcgttcaatattgcttgccggtcggtttgggcctctagccagtgctgct 304
           ||||||||| ||||||||  || ||||| || ||||| || || |||| ||| || || |
Sbjct: 675 tgctcatgtgctcgttcacgatagcttgacgatcggtctgagcttctaaccaatgttgtt 616

                                               
Query: 305 caaactgaatgttgtaaagtgcttcatctaactttg 340
           |||| || ||||||||||| || || ||||||||||
Sbjct: 615 caaattggatgttgtaaagagcctcctctaactttg 580
to top
>emb|AL929470.20| Human DNA sequence from clone RP11-72M14 on chromosome 1 Contains the
             5' end of the WNT2B gene for wingless-type MMTV
             integration site family, member 2B, the 5' end of the
             CAPZA1 gene for capping protein (actin filament) muscle
             Z-line, alpha 1 and a mitochondrial ribosomal protein L53
             (MRPL53) pseudogene, complete sequence
          Length = 34919

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 38    atgtaaaacaaagaatccacaaa 60
             |||||||||||||||||||||||
Sbjct: 12454 atgtaaaacaaagaatccacaaa 12432
to top
>dbj|AK093528.1| Homo sapiens cDNA FLJ36209 fis, clone THYMU2000022
          Length = 2510

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 38   atgtaaaacaaagaatccacaaa 60
            |||||||||||||||||||||||
Sbjct: 1850 atgtaaaacaaagaatccacaaa 1828
to top
>gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complete sequence
          Length = 152547

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 358    ggtgaaaaatgttcatctttggc 380
              |||||||||||||||||||||||
Sbjct: 143208 ggtgaaaaatgttcatctttggc 143186
to top
>gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome 7, complete sequence
          Length = 153106

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 31     attacatatgtaaaacaaagaa 52
              ||||||||||||||||||||||
Sbjct: 140605 attacatatgtaaaacaaagaa 140626
to top
>gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosome 7, complete sequence
          Length = 186032

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     attacatatgtaaaacaaagaa 52
              ||||||||||||||||||||||
Sbjct: 147190 attacatatgtaaaacaaagaa 147169
to top
>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete
             sequence
          Length = 176639

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 31    attacatatgtaaaacaaagaa 52
             ||||||||||||||||||||||
Sbjct: 63596 attacatatgtaaaacaaagaa 63575
to top
>gb|AY297781.1| Alcaligenes faecalis strain NCIB 8687 arsenite oxidation genes, partial
             sequence
          Length = 71383

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 445   gatttattggtgaagcagaag 465
             |||||||||||||||||||||
Sbjct: 17451 gatttattggtgaagcagaag 17431
to top
>dbj|AK222535.1| Homo sapiens mRNA for formyltetrahydrofolate dehydrogenase isoform a
            variant, clone: adSE01941
          Length = 3043

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 89   agcttcgaggggacgatgagg 109
            |||||||||||||||||||||
Sbjct: 1313 agcttcgaggggacgatgagg 1333
to top
>ref|XM_472105.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5136

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  aaacaaaggtgaaaaatgtt 370
            ||||||||||||||||||||
Sbjct: 2519 aaacaaaggtgaaaaatgtt 2538
to top
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   aaacaaaggtgaaaaatgtt 370
             ||||||||||||||||||||
Sbjct: 90978 aaacaaaggtgaaaaatgtt 90997
to top
>gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete sequence
          Length = 154844

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   caaaggtgaaaaatgttcat 373
             ||||||||||||||||||||
Sbjct: 67133 caaaggtgaaaaatgttcat 67114
to top
>gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete sequence
          Length = 113939

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    ctgatcaaaatacgaataat 403
              ||||||||||||||||||||
Sbjct: 106260 ctgatcaaaatacgaataat 106241
to top
>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    tcaaatttgtcactagtttt 515
              ||||||||||||||||||||
Sbjct: 135301 tcaaatttgtcactagtttt 135282
to top
>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    aaacaaaggtgaaaaatgtt 370
              ||||||||||||||||||||
Sbjct: 387471 aaacaaaggtgaaaaatgtt 387452
to top
>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence
          Length = 120811

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cgatgaggcggtgttttgga 121
             ||||||||||||||||||||
Sbjct: 73980 cgatgaggcggtgttttgga 73961
to top
>dbj|AB169462.1| Macaca fascicularis testis cDNA, clone: QtsA-21062, similar to human
            phosphoribosylglycinamide
            formyltransferase,phosphoribosylglycinamide
            synthetase,phosphoribosylaminoimidazole synthetase
            (GART),transcript variant 2, mRNA, RefSeq: NM_175085.1
          Length = 1834

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  tcatctaactttgcaatttg 347
            ||||||||||||||||||||
Sbjct: 1649 tcatctaactttgcaatttg 1668
to top
>gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, complete sequence
          Length = 187765

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   tcaaatttgtcactagtttt 515
             ||||||||||||||||||||
Sbjct: 82868 tcaaatttgtcactagtttt 82849
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 351      aaacaaaggtgaaaaatgtt 370
                ||||||||||||||||||||
Sbjct: 17530708 aaacaaaggtgaaaaatgtt 17530727
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 351     aaacaaaggtgaaaaatgtt 370
               ||||||||||||||||||||
Sbjct: 3213261 aaacaaaggtgaaaaatgtt 3213280
to top
>gb|AC064870.5| Homo sapiens BAC clone RP11-575E20 from 2, complete sequence
          Length = 133478

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    aaacaaaggtgaaaaatgtt 370
              ||||||||||||||||||||
Sbjct: 104315 aaacaaaggtgaaaaatgtt 104296
to top
>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence
          Length = 202303

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 382   tgctgatcaaaatacgaataatgt 405
             |||||||||||||| |||||||||
Sbjct: 44054 tgctgatcaaaataagaataatgt 44077
to top
>gb|AC004952.2|AC004952 Homo sapiens PAC clone RP5-1032D7 from 7p22, complete sequence
          Length = 137057

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   caaaggtgaaaaatgttcat 373
             ||||||||||||||||||||
Sbjct: 74349 caaaggtgaaaaatgttcat 74368
to top
>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence
          Length = 180016

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   ttcaaacaaaggtgaaaaat 367
             ||||||||||||||||||||
Sbjct: 65004 ttcaaacaaaggtgaaaaat 64985
to top
>emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-862P13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187564

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    acatatgtaaaacaaagaat 53
             ||||||||||||||||||||
Sbjct: 89686 acatatgtaaaacaaagaat 89667
to top
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05,
             complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   aaacaaaggtgaaaaatgtt 370
             ||||||||||||||||||||
Sbjct: 11448 aaacaaaggtgaaaaatgtt 11467
to top
>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20,
              complete sequence
          Length = 191218

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    aaacaaaggtgaaaaatgtt 370
              ||||||||||||||||||||
Sbjct: 189474 aaacaaaggtgaaaaatgtt 189493
to top
>gb|AC171635.3| Rhesus Macaque CHR21 BAC CH250-374E17 (Children's Hospital Oakland
              Research Institute Rhesus macaque Adult Male BAC Library)
              complete sequence
          Length = 172069

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    tcatctaactttgcaatttg 347
              ||||||||||||||||||||
Sbjct: 113360 tcatctaactttgcaatttg 113341
to top
>emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chromosome 2, complete
             sequence
          Length = 214210

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   gatggacacctctcttctga 486
             ||||||||||||||||||||
Sbjct: 54967 gatggacacctctcttctga 54986
to top
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
            complete sequence
          Length = 167317

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  aaacaaaggtgaaaaatgtt 370
            ||||||||||||||||||||
Sbjct: 7085 aaacaaaggtgaaaaatgtt 7104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,676,885
Number of Sequences: 3902068
Number of extensions: 4676885
Number of successful extensions: 83055
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82844
Number of HSP's gapped (non-prelim): 208
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top