ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18f17 |
|---|---|
| Clone Library Name | barley_pub |
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 286 bits (732), Expect = 4e-77 Identities = 138/149 (92%), Positives = 145/149 (97%) Frame = -3 Query: 679 STERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFE 500 ST+RFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF EPVNIGSDEMVSMNEMAEI+L FE Sbjct: 230 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFE 289 Query: 499 DKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 320 D++LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKE+T+G Sbjct: 290 DRELPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGV 349 Query: 319 DVARYGSSKVVSTQAPVQLGSLRAADGKE 233 D+A YGSSKVVSTQAPVQLGSLRAADGKE Sbjct: 350 DIAGYGSSKVVSTQAPVQLGSLRAADGKE 378
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 278 bits (710), Expect = 1e-74 Identities = 134/149 (89%), Positives = 142/149 (95%) Frame = -3 Query: 679 STERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFE 500 ST+RFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF EPVNIGSDEMVSMNEMAEIVL FE Sbjct: 223 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE 282 Query: 499 DKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 320 +K+LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTM+LKDGLR TYFWIKEQ+EKE+ EG Sbjct: 283 NKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGV 342 Query: 319 DVARYGSSKVVSTQAPVQLGSLRAADGKE 233 D++ YGSSKVV TQAPVQLGSLRAADGKE Sbjct: 343 DLSAYGSSKVVQTQAPVQLGSLRAADGKE 371
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 274 bits (700), Expect = 2e-73 Identities = 132/149 (88%), Positives = 140/149 (93%) Frame = -3 Query: 679 STERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFE 500 ST+RFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF EPVNIGSDEMVSMNEMAE+VL FE Sbjct: 229 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFE 288 Query: 499 DKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 320 +KKLPIHHIPGPEGVRGRNSDN LIKEKLGWAP M+LK+GLR TYFWIKEQIEKE+ +G Sbjct: 289 EKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGS 348 Query: 319 DVARYGSSKVVSTQAPVQLGSLRAADGKE 233 DV+ YGSSKVV TQAPVQLGSLRAADGKE Sbjct: 349 DVSLYGSSKVVGTQAPVQLGSLRAADGKE 377
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 61.6 bits (148), Expect = 2e-09 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 E ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ Sbjct: 283 EALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVAS 342 Query: 493 KLPIHHIP-GPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKE 335 + I +P + + R D K LGW P + L++GL T + ++E + Sbjct: 343 RSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 4/110 (3%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRLTKS-DFCEPVNIGSDEMVSMNEMAEIV---LGFEDK 494 +WG G R F +D+ + V+ L E VN+GS V++ E+AE+V +GF+ K Sbjct: 217 VWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGK 276 Query: 493 KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQI 344 + P+G + D++ I+E +GW P + LK+GL TY W E + Sbjct: 277 L--VWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYVENV 323
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 58.5 bits (140), Expect = 2e-08 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEG-VLRLTKSDFCEPVNIGSDEMVSMNEMAEIV---LGFEDK 494 +WG G R F +D+ + V + + E VN+GS V++ E+AE+V +GF+ K Sbjct: 217 VWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGK 276 Query: 493 KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKER 332 + P+G + D++ + LGW P + LKDGL TY W E + +++ Sbjct: 277 L--VWDTTKPDGTPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 58.2 bits (139), Expect = 2e-08 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRLTKSDFCEP-VNIGSDEMVSMNEMAEIVLGFEDKK-L 488 +WG G R FT +D+ E V+ L + E VN+GS E V++ E+AE V G + + Sbjct: 233 VWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGV 292 Query: 487 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY-FWIKEQ 347 PEGV R D+ ++ KLGW P + L+DG++ Y F+++ + Sbjct: 293 VAWDAARPEGVARRVVDSGRMR-KLGWEPRVALRDGIQDLYRFYLRHE 339
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 57.8 bits (138), Expect = 3e-08 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFCEPVNIGSDEMVSMNEMAEIV---LG 506 E +WG G R F +D+ + V L + E VNIGS + V++ E+AE+V +G Sbjct: 199 EEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVG 258 Query: 505 FEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQI 344 FE K P+G + D++ + LGW P + L+DGL TY W + + Sbjct: 259 FEGKLG--WDCTKPDGTPRKLMDSSKLAS-LGWTPKVSLRDGLSQTYDWYLKNV 309
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 E ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ Sbjct: 285 EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGS 344 Query: 493 KLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 341 I + + + R D K LGW P + L++GL + ++++E Sbjct: 345 GSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 E ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ Sbjct: 285 EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGS 344 Query: 493 KLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 341 I + + + R D K LGW P + L++GL + ++++E Sbjct: 345 GSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 E ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ Sbjct: 285 EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGS 344 Query: 493 KLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 341 I + + + R D K LGW P + L++GL + ++++E Sbjct: 345 GSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 E ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ Sbjct: 285 EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGS 344 Query: 493 KLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 341 I + + + R D K LGW P + L++GL + ++++E Sbjct: 345 GSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 55.8 bits (133), Expect = 1e-07 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 E+ ++G G QTR+F ++ + V G++ L S+ PVN+G+ + S+ + A ++ Sbjct: 286 EQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGS 345 Query: 493 KLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKE 335 I + + + R D K LGW P + L++GL T + ++++E + Sbjct: 346 GGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 50.4 bits (119), Expect = 5e-06 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Frame = -3 Query: 673 ERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-CEPVNIGSDEMVSMNEMAEIVLGFED 497 + E++ G R FT+I + V+G+LR K DF E N+G+ + V + E++ + + Sbjct: 209 KEIEVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLN 268 Query: 496 KKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 350 KK +P +G V +D + ++ LG+ P + +++GL+ W E Sbjct: 269 KKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 3/106 (2%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIV---LGFEDKK 491 ++GDG QTR F ++ + + L + + E VNIG+ + S+NE+ +I+ +GF + Sbjct: 199 IFGDGNQTRDFVYVGDVAKANL-MALNWKNEIVNIGTGKETSVNELFDIIKHEIGFRGEA 257 Query: 490 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIK 353 + + EG R + E LGW P + LK+G++ W+K Sbjct: 258 I---YDKPREGEVYRIYLDIKKAESLGWKPEIDLKEGIKRVVNWMK 300
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 44.7 bits (104), Expect = 3e-04 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%) Frame = -3 Query: 670 RFEMWGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDK 494 R ++GDGL R + +D+ V G+ + T+ NIG +S E+ ++L Sbjct: 203 RVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGA 262 Query: 493 KL-PIHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 359 + ++ +G R + D+T I+ +LG+AP + L DGL T W Sbjct: 263 DWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADGLAATVAW 309
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF| Length = 314 Score = 43.5 bits (101), Expect = 6e-04 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRLTKS-DFCEPVNIGSDEMVSMNEMAEI---VLGFEDK 494 +WG G TR F + ++C + ++ L K E +NIGS +S+ E+A I V+GF K Sbjct: 205 IWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGF--K 262 Query: 493 KLPIHHIPGPEGV-RGRNSDNTLIKEKLGWAPTMKLKDGLRFTY 365 + P+G R S L+ +GW P L+ GL +Y Sbjct: 263 GDIVFDTSKPDGTPRKLLSSERLV--SMGWRPKTSLELGLAKSY 304
>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ| Length = 315 Score = 41.6 bits (96), Expect = 0.002 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = -3 Query: 661 MWGDGLQTRSFTFI-DECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 ++GDGLQ R + F D C L L K E NIG + E+A ++L + Sbjct: 207 LYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTNKELASVILKHLGCEEL 266 Query: 484 IHHIPGPEGVRGRNSDN-TLIKEKLGWAPTMKLKDGLRFTYFW 359 H+ +G R + N + +K +LGW + ++G+ T W Sbjct: 267 FAHVEDRKGHDRRYAINASKLKNELGWRQEVTFEEGIARTIQW 309
>NOLK_AZOCA (P33217) Nodulation protein nolK| Length = 312 Score = 40.8 bits (94), Expect = 0.004 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 5/109 (4%) Frame = -3 Query: 676 TERFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEP--VNIGSDEMVSMNEMAEIV--- 512 +E +WGDG R F F + + +++ + P +N+G + +S+ E +V Sbjct: 196 SESVSIWGDGTARREFMFAYDFAKIIIKALEVPELIPSSMNVGVGKDLSVLEYYSLVARV 255 Query: 511 LGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY 365 +G+ + ++ + P G+R + D T + LGW P L+ G+R TY Sbjct: 256 IGWSGEF--VYDLNRPVGMRSKLMDITHLTA-LGWVPERSLEGGIRSTY 301
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 39.7 bits (91), Expect = 0.009 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 9/122 (7%) Frame = -3 Query: 664 EMWGDGLQTRSFTFIDECVEGVLR-LTKSDFCEPVNIGSDEMVSMNEMAEIVLG-FEDKK 491 +++G+G R + ++ GV LTK E IG+D + E+ E++L K Sbjct: 216 KLYGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPK 275 Query: 490 LPIHHIPGPEGVRGRNS-DNTLIKEKLGWAPTM-KLKDGLRFTYFWIKE-----QIEKER 332 H+ G R + D+T ++E+LGW P ++GL T W E + EKE Sbjct: 276 NAYDHVTDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEA 335 Query: 331 TE 326 E Sbjct: 336 VE 337
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 37.7 bits (86), Expect = 0.033 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 24/129 (18%) Frame = -3 Query: 664 EMWGDGLQTRSFTFIDECVEGVLRL----------------TKSDFCEP---VNIGSD-- 548 +++ G R FT+ID+ E ++RL T + P NIG+ Sbjct: 206 DVYNYGKMKRDFTYIDDIAEAIIRLQDVIPHADTQWTVETGTPAASIAPYRVYNIGNSSP 265 Query: 547 -EMVSMNEMAEIVLGFEDKK--LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGL 377 E++ + E LG E KK LP+ P V ++D + E +G+ P +KDG+ Sbjct: 266 VELMDYIQALEDALGIEAKKNMLPLQ----PGDVLETSADTKALYEVIGFTPETTVKDGV 321 Query: 376 RFTYFWIKE 350 + W ++ Sbjct: 322 KNFVNWYRD 330
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 37.7 bits (86), Expect = 0.033 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%) Frame = -3 Query: 655 GDGLQTRSFTFIDECVEGVLR-LTKSDFCEPVNIGSDEMVSMNEMA-EIVLGFEDKKLPI 482 G GLQTR+F + + VE L L K E NIG++ +S+ ++A E++ ++ Sbjct: 224 GSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSES 283 Query: 481 HHIPGPEGVRGRNSDNTLIKEK------LGWAPTMKLKDGLRFTYFWIKE 350 + V R +++ K LGW P + K+G++ T W +E Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 37.0 bits (84), Expect = 0.057 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 16/117 (13%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEG-VLRLTKSDFCEPVNIGSD------EMVS-----MNEMAE 518 ++GDG Q R + F+++ V+ L LTK E NIG + E+V + E+A Sbjct: 216 IYGDGQQIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAP 275 Query: 517 I----VLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFW 359 + +ED + PG + VR + D + I +LGW P + + GLR T W Sbjct: 276 SKPNHIKYYEDLMTFVKDRPGHD-VR-YSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
>HLDD_DESVH (Q72ET7) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 323 Score = 37.0 bits (84), Expect = 0.057 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -3 Query: 658 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPV-NIGSDEMVSMNEMAEIVLGFEDKKLPI 482 + DG Q R F ++ +CVE + L ++ V N+G+ + + N++ V D++ I Sbjct: 209 YADGGQMRDFIYVKDCVEVMWWLLQNPGVNGVFNVGTGKARTWNDLVTAVFRAMDREPVI 268 Query: 481 HHIPGPEGVRGR 446 +I PE +RG+ Sbjct: 269 EYIDMPEQLRGK 280
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 37.0 bits (84), Expect = 0.057 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 13/123 (10%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEG---VLRLTKSDFCEP-------VNIGSDEMVSMNEMAEI- 515 +WG G R F +D+ V+ L + E +N+G+ ++ E+A+ Sbjct: 201 VWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTI 260 Query: 514 --VLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 341 V+G++ + + P+G + D T + + LGW + L+ GL TY W E + Sbjct: 261 AKVVGYKGRV--VFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQD 317 Query: 340 KER 332 + R Sbjct: 318 RFR 320
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 35.0 bits (79), Expect = 0.22 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Frame = -3 Query: 655 GDGLQTRSFTFIDECVEGVLR-LTKSDFCEPVNIGSDEMVSMNEMA-EIVLGFEDKKLPI 482 G GLQ R+F + + VE L LTK + E NIG++ +S+ ++A E++ ++ Sbjct: 224 GSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSES 283 Query: 481 HHIPGPEGVRGRNSDNTLIKEK------LGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 320 + V R ++ K LGW P + ++G++ T W ++ + K Sbjct: 284 ETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEK 343
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 35.0 bits (79), Expect = 0.22 Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 22/140 (15%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRLT--KSDFC--EPVNIGS-DEMVSMNEMAEIVL---- 509 ++ G Q R FT I + +E + R+ ++D C + +NIG+ D S+ ++ E +L Sbjct: 529 LFDGGEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFE 588 Query: 508 ------------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY 365 GF D + + G + V R K L W PT+++ + + T Sbjct: 589 AHPLRGNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSETIGNTL 648 Query: 364 -FWIKEQIEKERTEGKDVAR 308 F+++E + + K AR Sbjct: 649 DFFLREAMLEIADRAKQEAR 668
>RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 35.0 bits (79), Expect = 0.22 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 14/115 (12%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 ++GDG+Q R + F+++ + ++ T+ E NIG + E+ + + ++ P Sbjct: 216 VYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAP 275 Query: 484 ------------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 359 I + G R + D I+ LGW P + GLR T W Sbjct: 276 EKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQW 330
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 33.5 bits (75), Expect = 0.63 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 21/115 (18%) Frame = -3 Query: 649 GLQTRSFTFIDECVEGVLRL--TKSDFCEP--VNIGS-DEMVSMNEMAEIVLGFEDKKLP 485 G Q R FT I + +E + R+ D C+ +NIG+ D S+ E+A ++L DK Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 484 IHHIP----------------GPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFT 368 H P G + V R + LGW P++ ++D + T Sbjct: 591 RCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEET 645
>RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 33.1 bits (74), Expect = 0.82 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 14/115 (12%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 ++GDG+Q R + F+++ + ++ T+ E NIG + E+ + + ++ P Sbjct: 216 VYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAP 275 Query: 484 ------------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 359 I + G R + D I+ LGW P + GLR T W Sbjct: 276 EKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQW 330
>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 346 Score = 33.1 bits (74), Expect = 0.82 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 14/115 (12%) Frame = -3 Query: 661 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 ++GDG Q R + F+++ + ++ T+ E NIG + E+ + + ++ P Sbjct: 221 VYGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAP 280 Query: 484 ------------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 359 I + G R + D I+ LGW P + GLR T W Sbjct: 281 EKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQW 335
>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic| region Length = 636 Score = 33.1 bits (74), Expect = 0.82 Identities = 27/95 (28%), Positives = 41/95 (43%) Frame = +3 Query: 300 DPYRATSFPSVLSFSICSLIQK*VNLRPSLSFIVGAQPSFSLMRVLSELRPRTPSGPGMW 479 D Y + P+ S+SI + PS+S P S + SE T + P + Sbjct: 101 DTYSSQYDPATSSYSI---------ITPSMSIFSSTSPMSSSSSITSEWSSLTSTTPTLS 151 Query: 480 WMGSFLSSKPRTISAISFMLTISSLPMFTGSQKSD 584 + LSS ++S+ S +L SSL + S SD Sbjct: 152 SSATSLSSSWSSLSSPSSLLVSSSLSLSLSSSYSD 186
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 33.1 bits (74), Expect = 0.82 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 21/133 (15%) Frame = -3 Query: 664 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFCEP--------------------VNIGSDE 545 +++G+G +R FT+ID+ VE ++RL+ E VN G + Sbjct: 207 DIYGEGRMSRDFTYIDDLVESIVRLSHVPPSEENRVAPEKATDTLSRHAPFRVVNTGGGQ 266 Query: 544 MVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRN-SDNTLIKEKLGWAPTMKLKDGLRFT 368 V + E V + + +P +G R + L++ G+ P++ +++G+ Sbjct: 267 PVELMTFVETVEKAVGRPAIHNMLPMQQGDVPRTFASPDLLEALTGFKPSVSVEEGVARF 326 Query: 367 YFWIKEQIEKERT 329 W + + T Sbjct: 327 VEWYDQNYRRAHT 339
>GALE_HUMAN (Q14376) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 348 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Frame = -3 Query: 652 DGLQTRSFTFIDECVEGVL----RLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 DG R + + + +G + +L + C N+G+ S+ +M + + KK+P Sbjct: 234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293 Query: 484 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 350 + EG V ++ +L +E+LGW + L + W K+ Sbjct: 294 YKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 32.0 bits (71), Expect = 1.8 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 21/127 (16%) Frame = -3 Query: 649 GLQTRSFTFIDECVEGVLRL--TKSDFCEP--VNIGS-DEMVSMNEMAEIVL-------- 509 G Q R FT +D+ +E + R+ + C+ VNIG+ D S+ ++ E +L Sbjct: 532 GAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPL 591 Query: 508 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIK 353 GF + + + G + V R + L W PT++L++ + T + Sbjct: 592 RAQFPPFAGFREVESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFL 651 Query: 352 EQIEKER 332 + +ER Sbjct: 652 HEALRER 658
>GALE_MOUSE (Q8R059) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -3 Query: 652 DGLQTRSFTFIDECVEGVL----RLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 DG R + + + +G + +L + C N+G+ S+ +M + + KK+P Sbjct: 233 DGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIP 292 Query: 484 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 350 + EG V ++ +L E+LGW + L + W K+ Sbjct: 293 YKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQ 338
>GFRA3_MOUSE (O35118) GDNF family receptor alpha-3 precursor (GFR-alpha-3)| Length = 397 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -3 Query: 190 PNCPPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 38 PNC + SF C A P+C S HCHP +L +C S Sbjct: 243 PNCLDLRSF----------CRADPLCRSRLMDFQTHCHPMDILGTCATEQS 283
>GALE_RAT (P18645) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -3 Query: 652 DGLQTRSFTFIDECVEGVL----RLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 485 DG R + + + +G + +L + C N+G+ S+ +M + + KK+P Sbjct: 233 DGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 292 Query: 484 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 350 + EG V ++ +L E+LGW + L + W K+ Sbjct: 293 YKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQ 338
>SO1C1_HUMAN (Q9NYB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter polypeptide-related protein Length = 712 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/78 (21%), Positives = 32/78 (41%) Frame = +3 Query: 444 LRPRTPSGPGMWWMGSFLSSKPRTISAISFMLTISSLPMFTGSQKSDFVNLRTPSTHSSI 623 + P+ P G WW+G ++ ++A+ F SLP + S+ + S S Sbjct: 263 ITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSN-----SSSEKSKF 317 Query: 624 KVNDRVCRPSPHISNRSV 677 ++D +P N + Sbjct: 318 IIDDHTDYQTPQGENAKI 335
>ARNA_ERWCT (Q6D2F1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 673 Score = 30.8 bits (68), Expect = 4.1 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 21/128 (16%) Frame = -3 Query: 649 GLQTRSFTFIDECVEGVLRL--TKSDFCEP--VNIGSDEM-VSMNEMAEIVL-------- 509 G Q R FT I + +E + R+ ++ C+ +NIG+ S+ E+ E++L Sbjct: 538 GAQKRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPL 597 Query: 508 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIK 353 GF D + ++ G + V R K L W PT+K++ + T + Sbjct: 598 RDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFL 657 Query: 352 EQIEKERT 329 ++ T Sbjct: 658 RTVDVPHT 665
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 30.8 bits (68), Expect = 4.1 Identities = 34/105 (32%), Positives = 49/105 (46%) Frame = +3 Query: 318 SFPSVLSFSICSLIQK*VNLRPSLSFIVGAQPSFSLMRVLSELRPRTPSGPGMWWMGSFL 497 S PS+ S S S Q L +LS + ++ S S M+V S T S S Sbjct: 74 STPSIASVSFTSFPQSSSLL--TLSSTLSSELSSSSMQVSSS---STSSSSSEVTSSSSS 128 Query: 498 SSKPRTISAISFMLTISSLPMFTGSQKSDFVNLRTPSTHSSIKVN 632 SS + S+ + + + SSLP FT + S V T ST SS+ ++ Sbjct: 129 SSISPSSSSSTIISSSSSLPTFTVASTSSTVASSTLSTSSSLVIS 173
>GFRA3_HUMAN (O60609) GDNF family receptor alpha-3 precursor (GFR-alpha-3)| Length = 400 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -3 Query: 190 PNC--PPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 38 PNC PP+ LE C + P+C S HCHP +L +C S Sbjct: 237 PNCALPPVAP---NCLELRRLCFSDPLCRSRLVDFQTHCHPMDILGTCATEQS 286
>ALCR_EMENI (P21228) Regulatory protein alcR| Length = 821 Score = 30.4 bits (67), Expect = 5.3 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 168 PSLRKHLRIAQPALPTPCVIQQILVLLFIVTPIN--YYHRVNRI 43 P H +I+QPA PC +Q L TP+ Y RV ++ Sbjct: 566 PDHESHTQISQPAARWPCTYEQAAAALSSATPVKVLLYRRVTQL 609
>RY44_DROME (Q24498) Ryanodine receptor 44F| Length = 5127 Score = 30.4 bits (67), Expect = 5.3 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +2 Query: 191 QWHNRPGVDMHSCLLLAVSRAEGAQLHRCLCGHHL 295 Q R G D H LL + AEGA+L C HHL Sbjct: 1974 QAFEREGKDEHRKGLLTMKMAEGAKLQMCYLLHHL 2008
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 30.4 bits (67), Expect = 5.3 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 4/109 (3%) Frame = -3 Query: 655 GDGLQTRSFTFIDECVEGV-LRLTKSDFCEPVNIGSDEMVSMNEMAEIV--LGFEDKKLP 485 GDG RS+ + ++ E + L K + NIG+ + +N++A+ + L D + Sbjct: 217 GDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEAN 276 Query: 484 IHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 341 I + P + D+ +K KLGW+ ++GL+ T W + E Sbjct: 277 IKFVDNRPFNDQRYFLDDQKLK-KLGWSERTTWEEGLKKTMDWYTQNPE 324
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 30.0 bits (66), Expect = 7.0 Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 22/127 (17%) Frame = -3 Query: 649 GLQTRSFTFIDECVEGVLRLTKS-DFC---EPVNIGS-DEMVSMNEMAEIVL-------- 509 G Q R FT + + +E + R+ ++ D C + +NIG+ D S+ ++ E +L Sbjct: 533 GAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPL 592 Query: 508 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY-FWI 356 GF + + + G + V R ++ +GW P ++L + + T F++ Sbjct: 593 RGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDFFL 652 Query: 355 KEQIEKE 335 +E + ++ Sbjct: 653 REAMAEK 659
>GNE_ECO57 (Q8X7P7) UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7)| (UDP-GlcNAc 4-epimerase) Length = 331 Score = 30.0 bits (66), Expect = 7.0 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = -3 Query: 670 RFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFC--EPVNIGSDEMVSMNEMAEIVLGFED 497 +F M G G +S ++ VE + K+ E N ++MN++ V + Sbjct: 184 KFMMVGAGTNYKSMAYVGNIVEFIKYKLKNVAAGYEVYNYVDKPDLNMNQLVAEVEQSLN 243 Query: 496 KKLPIHHIPGPEGVRG 449 KK+P H+P P G+ G Sbjct: 244 KKIPSMHLPYPLGMLG 259
>PANC_NEIMA (P57035) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 278 Score = 30.0 bits (66), Expect = 7.0 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -3 Query: 367 YFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQLGSLRAADGKE 233 Y W+ + +E R + +VAR G K+V A +LG+ R D E Sbjct: 231 YGWVVDYVEIRRVDTLEVARAGDKKLV-VLAAARLGTTRLIDNLE 274
>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889| Length = 156 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -3 Query: 496 KKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYF------W----IKEQ 347 K +P+ I P G RG+N+D I +K G A + G R W + +Q Sbjct: 29 KDMPLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQ 88 Query: 346 IEKERTEGKDVA 311 ++ + +G+DV+ Sbjct: 89 LDSWKLDGRDVS 100
>POL_OMVVS (P16901) Pol polyprotein [Contains: Protease (EC 3.4.23.-)| (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) (dUTPase); Integrase (IN)] Length = 1086 Score = 29.6 bits (65), Expect = 9.1 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = -3 Query: 610 VEGVLRLTKSDFCEPVNI-GSDEMVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRNSDN 434 +EG + + S PV + G D M + ++ I+ E+KK+PI + EG +G + Sbjct: 91 IEGTIVVLPSS---PVEVLGRDNMAKL-DIGIIMANLEEKKIPITQVKLKEGCKGPHIAQ 146 Query: 433 TLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 320 W T + +GL KE ++K EGK Sbjct: 147 --------WPLTQEKLEGL-------KEIVDKLEKEGK 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,449,444 Number of Sequences: 219361 Number of extensions: 2090994 Number of successful extensions: 6622 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 6304 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6601 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
