ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103859.1| Zea mays PCO146670 mRNA sequence 198 1e-47
2ref|XM_550628.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
3dbj|AK121057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
4ref|XM_550627.1| Oryza sativa (japonica cultivar-group), mRNA 172 8e-40
5dbj|AK061597.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 8e-40
6ref|XM_550379.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
7dbj|AK062450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
9dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
11dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
12dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
13dbj|AK099514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
14dbj|AK059641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
15dbj|AK059243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
16gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
19dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
20dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
21gb|AC110219.11| Mus musculus chromosome 1, clone RP24-541P18, co... 46 0.12
22gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.48
23gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.48
24gb|M16893.1|MVOMCR Methanococcus vannielii methyl coenzyme M red... 44 0.48
25emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chr... 44 0.48
26ref|NM_174112.1| Bos taurus matrix metalloproteinase 1 (MMP1), mRNA 42 1.9
27ref|XM_478486.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
28ref|XM_549123.2| PREDICTED: Canis familiaris similar to nucleoso... 42 1.9
29ref|XM_857388.1| PREDICTED: Canis familiaris similar to Axin 2 (... 42 1.9
30gb|AC117206.3| Mus musculus BAC clone RP23-260L17 from 5, comple... 42 1.9
31emb|X58256.1|BTCLG Bovine CLG mRNA for collagenase 42 1.9
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
33gb|AC009796.6|AC009796 Homo sapiens chromosome 11, clone RP11-21... 42 1.9
34gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome 3R, r... 42 1.9
35gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome 3R, ... 42 1.9
36gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, r... 42 1.9
37gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain trans... 42 1.9
38dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
39dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
40gb|AE003691.4| Drosophila melanogaster chromosome 3R, section 29... 42 1.9
41emb|BX629358.1|CNS09SBU Tetraodon nigroviridis BAC sequence 42 1.9
42gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, com... 40 7.5
43gb|BT016620.1| Zea mays clone Contig453 mRNA sequence 40 7.5
44gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
45gb|AC124977.8| Mus musculus chromosome 7, clone RP24-89J20, comp... 40 7.5
46ref|XM_419445.1| PREDICTED: Gallus gallus similar to Trerf1 prot... 40 7.5
47gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic seque... 40 7.5
48ref|XM_879525.1| PREDICTED: Bos taurus similar to v-abl Abelson ... 40 7.5
49ref|XM_879497.1| PREDICTED: Bos taurus similar to v-abl Abelson ... 40 7.5
50ref|XM_879465.1| PREDICTED: Bos taurus similar to v-abl Abelson ... 40 7.5
51ref|XM_879434.1| PREDICTED: Bos taurus similar to v-abl Abelson ... 40 7.5
52ref|XM_866988.1| PREDICTED: Bos taurus similar to v-abl Abelson ... 40 7.5
53gb|AY554355.1| Takifugu rubripes claudin 11b (cldn11b) gene, com... 40 7.5
54ref|XM_322479.1| Neurospora crassa OR74A predicted protein (NCU0... 40 7.5
55ref|XM_952187.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
56ref|XM_605127.2| PREDICTED: Bos taurus similar to polymerase (RN... 40 7.5
57ref|XM_659361.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.5
58gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete se... 40 7.5
59gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.5
60emb|Z79758.1|CEW10D5 Caenorhabditis elegans Cosmid W10D5, comple... 40 7.5
61gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 7.5
62gb|AC116594.4| Mus musculus BAC clone RP24-127F20 from 19, compl... 40 7.5
63gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, co... 40 7.5
64gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, com... 40 7.5
65gb|U49945.1| Caenorhabditis elegans cosmid C02H7, complete sequence 40 7.5
66ref|NM_001009694.1| Rattus norvegicus ribose-phosphate pyrophosp... 40 7.5
67gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete se... 40 7.5
68emb|AL445226.9| Human DNA sequence from clone RP11-261F2 on chro... 40 7.5
69emb|AL390715.23| Human DNA sequence from clone RP11-167O6 on chr... 40 7.5
70emb|AL139148.12| Human DNA sequence from clone RP4-630J13 on chr... 40 7.5
71gb|AF472304.1|F472304S01 Mus musculus Ruk protein (Sh3kbp1) gene... 40 7.5
72gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP... 40 7.5
73gb|AC158198.2| Physcomitrella patens clone JGIASYB-1A13, complet... 40 7.5
74gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, comple... 40 7.5
75gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Ca... 40 7.5
76dbj|AK141290.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 7.5
77dbj|AK172022.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.5
78gb|AC010292.8| Homo sapiens chromosome 5 clone CTB-131H22, compl... 40 7.5
79dbj|AK080930.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 7.5
80dbj|AK049182.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 7.5
81dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
82gb|AC104599.4| Homo sapiens BAC clone RP11-652K9 from 2, complet... 40 7.5
83gb|AC079895.7| Homo sapiens BAC clone RP11-749M12 from 2, comple... 40 7.5
84gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosom... 40 7.5
85gb|AC133282.7| Mus musculus chromosome 15, clone RP24-408B1, com... 40 7.5
86gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, co... 40 7.5
87gb|AY196298.1| Mus musculus Igh locus, 5' flanking sequence cont... 40 7.5
88gb|AC026624.8| Homo sapiens chromosome 15, clone RP11-652P10, co... 40 7.5
89gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, com... 40 7.5
90gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, comp... 40 7.5
91gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromos... 40 7.5
92dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.5
93dbj|AP002449.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.5
94dbj|AP003400.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.5
95gb|DQ288846.1| Brassica oleracea var. botrytis NADH dehydrogenas... 40 7.5
96gb|AC132414.4| Mus musculus BAC clone RP23-383E9 from 12, comple... 40 7.5
97dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 7.5
98dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complet... 40 7.5
99dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge... 40 7.5
100dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 7.5
101gb|U81831.1|HSU81831 Human cosmid LL12NCO1-67C6, ETV6 gene, intr... 40 7.5
102emb|AL671706.8| Mouse DNA sequence from clone RP23-330O24 on chr... 40 7.5
103emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chro... 40 7.5
104gb|BC088149.1| Rattus norvegicus ribose-phosphate pyrophosphokin... 40 7.5 
>gb|AY103859.1| Zea mays PCO146670 mRNA sequence
          Length = 613

 Score =  198 bits (100), Expect = 1e-47
 Identities = 137/148 (92%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                       
Query: 300 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 307

                                                                       
Query: 360 cagcacaacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctct-g 418
           ||||||| ||| ||||| | |||| ||||||||||||||||||||||||| ||||||| |
Sbjct: 306 cagcacagcgcagtgaagatgcatccgtagaggcagcccttctcctcgtgccgcctctgg 247

                                       
Query: 419 cacgtggtcggtgtaggacatctcctgc 446
           |||||| ||   ||||||||||||||||
Sbjct: 246 cacgtgctccaagtaggacatctcctgc 219
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>ref|XM_550628.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 509

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Minus

                                                                       
Query: 300 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 221

                                                                       
Query: 360 cagcacaacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctctgc 419
           |||||||  || ||||| | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 220 cagcacagtgcagtgaagatgcatgcatagaggcaacccttctcctcatggcgcctctgc 161

             
Query: 420 ac 421
           ||
Sbjct: 160 ac 159
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>dbj|AK121057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056I18, full
           insert sequence
          Length = 508

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Minus

                                                                       
Query: 300 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 220

                                                                       
Query: 360 cagcacaacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctctgc 419
           |||||||  || ||||| | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 219 cagcacagtgcagtgaagatgcatgcatagaggcaacccttctcctcatggcgcctctgc 160

             
Query: 420 ac 421
           ||
Sbjct: 159 ac 158
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>ref|XM_550627.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 491

 Score =  172 bits (87), Expect = 8e-40
 Identities = 102/107 (95%)
 Strand = Plus / Minus

                                                                       
Query: 300 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 203

                                                          
Query: 360 cagcacaacgccgtgaacacgcatgcgtagaggcagcccttctcctc 406
           |||||||  || ||||| | |||||||||||||||||||||||||||
Sbjct: 202 cagcacagtgcagtgaagatgcatgcgtagaggcagcccttctcctc 156
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>dbj|AK061597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G09, full
           insert sequence
          Length = 491

 Score =  172 bits (87), Expect = 8e-40
 Identities = 102/107 (95%)
 Strand = Plus / Minus

                                                                       
Query: 300 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 203

                                                          
Query: 360 cagcacaacgccgtgaacacgcatgcgtagaggcagcccttctcctc 406
           |||||||  || ||||| | |||||||||||||||||||||||||||
Sbjct: 202 cagcacagtgcagtgaagatgcatgcgtagaggcagcccttctcctc 156
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>ref|XM_550379.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 539

 Score =  155 bits (78), Expect = 2e-34
 Identities = 141/162 (87%)
 Strand = Plus / Minus

                                                                       
Query: 306 cagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagcac 365
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 262 cagcagcagcagaggcattcgaggcagcactcgcaggtctcgtagcagcagaagcagcag 203

                                                                       
Query: 366 aacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctctgcacgtgg 425
            |    ||||||| |||||| ||||||||||| || ||||| |||||| |||  || |||
Sbjct: 202 cagagggtgaacaggcatgcatagaggcagcctttgtcctcatggcgcttcttgacatgg 143

                                                     
Query: 426 tcggtgtaggacatctcctgccccgacggagcgtcgtacatc 467
           |||| |||||||||||||||| ||| ||||| || |||||||
Sbjct: 142 tcggagtaggacatctcctgcgccgccggagggttgtacatc 101
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>dbj|AK062450.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-C02, full
           insert sequence
          Length = 539

 Score =  155 bits (78), Expect = 2e-34
 Identities = 141/162 (87%)
 Strand = Plus / Minus

                                                                       
Query: 306 cagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagcac 365
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 262 cagcagcagcagaggcattcgaggcagcactcgcaggtctcgtagcagcagaagcagcag 203

                                                                       
Query: 366 aacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctctgcacgtgg 425
            |    ||||||| |||||| ||||||||||| || ||||| |||||| |||  || |||
Sbjct: 202 cagagggtgaacaggcatgcatagaggcagcctttgtcctcatggcgcttcttgacatgg 143

                                                     
Query: 426 tcggtgtaggacatctcctgccccgacggagcgtcgtacatc 467
           |||| |||||||||||||||| ||| ||||| || |||||||
Sbjct: 142 tcggagtaggacatctcctgcgccgccggagggttgtacatc 101
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  133 bits (67), Expect = 7e-28
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                           
Query: 300     tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2260902 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 2260961

                      
Query: 360     cagcaca 366
               |||||||
Sbjct: 2260962 cagcaca 2260968



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 381     catgcgtagaggcagcccttctcctcgtggcgcctctgcac 421
               ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 2261553 catgcatagaggcaacccttctcctcatggcgcctctgcac 2261593



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 381     catgcgtagaggcagcccttctcctc 406
               ||||||||||||||||||||||||||
Sbjct: 2262784 catgcgtagaggcagcccttctcctc 2262809
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>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0535G04
          Length = 154180

 Score =  133 bits (67), Expect = 7e-28
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                          
Query: 300    tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120359 tagttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaag 120418

                     
Query: 360    cagcaca 366
              |||||||
Sbjct: 120419 cagcaca 120425



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                       
Query: 381    catgcgtagaggcagcccttctcctcgtggcgcctctgcac 421
              ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 121010 catgcatagaggcaacccttctcctcatggcgcctctgcac 121050



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 381    catgcgtagaggcagcccttctcctc 406
              ||||||||||||||||||||||||||
Sbjct: 122241 catgcgtagaggcagcccttctcctc 122266
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  109 bits (55), Expect = 1e-20
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                          
Query: 306     cagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
               ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4065624 cagcagcagcagaggcattcgaggcagcactcgcaggtctcgtagcagcagaagcagca 4065682



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                           
Query: 381     catgcgtagaggcagcccttctcctcgtggcgcctctgcacgtggtcggtgtaggacatc 440
               ||||| ||||||||||| || ||||| |||||| |||  || ||||||| ||||||||||
Sbjct: 4066133 catgcatagaggcagcctttgtcctcatggcgcttcttgacatggtcggagtaggacatc 4066192

                                          
Query: 441     tcctgccccgacggagcgtcgtacatc 467
               |||||| ||| ||||| || |||||||
Sbjct: 4066193 tcctgcgccgccggagggttgtacatc 4066219
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score =  109 bits (55), Expect = 1e-20
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                        
Query: 306   cagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
             ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 32367 cagcagcagcagaggcattcgaggcagcactcgcaggtctcgtagcagcagaagcagca 32425



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                         
Query: 381   catgcgtagaggcagcccttctcctcgtggcgcctctgcacgtggtcggtgtaggacatc 440
             ||||| ||||||||||| || ||||| |||||| |||  || ||||||| ||||||||||
Sbjct: 32876 catgcatagaggcagcctttgtcctcatggcgcttcttgacatggtcggagtaggacatc 32935

                                        
Query: 441   tcctgccccgacggagcgtcgtacatc 467
             |||||| ||| ||||| || |||||||
Sbjct: 32936 tcctgcgccgccggagggttgtacatc 32962
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score =  109 bits (55), Expect = 1e-20
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                        
Query: 306   cagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
             ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12595 cagcagcagcagaggcattcgaggcagcactcgcaggtctcgtagcagcagaagcagca 12653



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                         
Query: 381   catgcgtagaggcagcccttctcctcgtggcgcctctgcacgtggtcggtgtaggacatc 440
             ||||| ||||||||||| || ||||| |||||| |||  || ||||||| ||||||||||
Sbjct: 13104 catgcatagaggcagcctttgtcctcatggcgcttcttgacatggtcggagtaggacatc 13163

                                        
Query: 441   tcctgccccgacggagcgtcgtacatc 467
             |||||| ||| ||||| || |||||||
Sbjct: 13164 tcctgcgccgccggagggttgtacatc 13190
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>dbj|AK099514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029L20, full
           insert sequence
          Length = 551

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 97/114 (85%)
 Strand = Plus / Minus

                                                                       
Query: 305 gcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
           |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gcagcagcagcagagtgtctcgaggcagcactcgcaggtctcgtagcagcagaagcagca 224

                                                                 
Query: 365 caacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctctg 418
             ||   || |||| |||||| || | |||||| || ||||| |||||||||||
Sbjct: 223 gcacagtgtaaacaggcatgcatataagcagcctttttcctcatggcgcctctg 170
to top
>dbj|AK059641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B08, full
           insert sequence
          Length = 681

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                       
Query: 303 ttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcag 362
           |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||
Sbjct: 281 ttgcagcagcagcagaagcactcgaggcagtgctcgcaggtttcgtagcagcagaagcag 222

                                                             
Query: 363 cacaacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcg 412
           ||  ||  | |||||| ||| || |||||| |||||||||| || |||||
Sbjct: 221 cagcacagcatgaacaagcaggcatagaggaagcccttctcttcatggcg 172
to top
>dbj|AK059243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F11, full
           insert sequence
          Length = 524

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 97/114 (85%)
 Strand = Plus / Minus

                                                                       
Query: 305 gcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
           |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gcagcagcagcagagtgtctcgaggcagcactcgcaggtctcgtagcagcagaagcagca 222

                                                                 
Query: 365 caacgccgtgaacacgcatgcgtagaggcagcccttctcctcgtggcgcctctg 418
             ||   || |||| |||||| || | |||||| || ||||| |||||||||||
Sbjct: 221 gcacagtgtaaacaggcatgcatataagcagcctttttcctcatggcgcctctg 168
to top
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02,
              complete sequence
          Length = 156649

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                          
Query: 305    gcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
              |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117003 gcagcagcagcagagtgtctcgaggcagcactcgcaggtctcgtagcagcagaagcagca 117062
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                           
Query: 305     gcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcagca 364
               |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4606536 gcagcagcagcagagtgtctcgaggcagcactcgcaggtctcgtagcagcagaagcagca 4606595
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 303     ttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcag 362
               |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||
Sbjct: 6077679 ttgcagcagcagcagaagcactcgaggcagtgctcgcaggtttcgtagcagcagaagcag 6077738

                 
Query: 363     ca 364
               ||
Sbjct: 6077739 ca 6077740
to top
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_A02
          Length = 175153

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 303   ttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcag 362
             |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||
Sbjct: 43161 ttgcagcagcagcagaagcactcgaggcagtgctcgcaggtttcgtagcagcagaagcag 43220

               
Query: 363   ca 364
             ||
Sbjct: 43221 ca 43222
to top
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F05
          Length = 147472

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 303   ttgcagcagcagcagaggcagtcgaggcagcactcgcaggtctcgtagcagcagaagcag 362
             |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||
Sbjct: 98518 ttgcagcagcagcagaagcactcgaggcagtgctcgcaggtttcgtagcagcagaagcag 98577

               
Query: 363   ca 364
             ||
Sbjct: 98578 ca 98579
to top
>gb|AC110219.11| Mus musculus chromosome 1, clone RP24-541P18, complete sequence
          Length = 193614

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 305    gcagcagcagcagaggcagtcgaggca 331
              |||||||||||||||||||| ||||||
Sbjct: 148228 gcagcagcagcagaggcagtggaggca 148254
to top
>gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-258F1, complete
              sequence
          Length = 118461

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 305    gcagcagcagcagaggcagtcgaggcagca 334
              |||||||||||||||||||  |||||||||
Sbjct: 117936 gcagcagcagcagaggcagcagaggcagca 117965



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 306    cagcagcagcagaggcagtcgaggcagca 334
              ||||||||||||||||||  |||||||||
Sbjct: 117913 cagcagcagcagaggcagcagaggcagca 117941
to top
>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete
             sequence
          Length = 199642

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 305   gcagcagcagcagaggcagtcgaggcagca 334
             |||||||||||||||||||  |||||||||
Sbjct: 22808 gcagcagcagcagaggcagcagaggcagca 22837



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 306   cagcagcagcagaggcagtcgaggcagca 334
             ||||||||||||||||||  |||||||||
Sbjct: 22785 cagcagcagcagaggcagcagaggcagca 22813
to top
>gb|M16893.1|MVOMCR Methanococcus vannielii methyl coenzyme M reductase (mcrBDCGA) gene
            cluster, complete cds
          Length = 5412

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 296  ggtttagttgcagcagcagcag 317
            ||||||||||||||||||||||
Sbjct: 1199 ggtttagttgcagcagcagcag 1220
to top
>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete
             sequence
          Length = 95219

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 309   cagcagcagaggcagtcgaggcagca 334
             |||||||||||||||| |||||||||
Sbjct: 78388 cagcagcagaggcagtagaggcagca 78413
to top
>ref|NM_174112.1| Bos taurus matrix metalloproteinase 1 (MMP1), mRNA
          Length = 2025

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 305 gcagcagcagcagaggcagtc 325
           |||||||||||||||||||||
Sbjct: 39  gcagcagcagcagaggcagtc 19
to top
>ref|XM_478486.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 414

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 314 gcagaggcagtcgaggcagca 334
           |||||||||||||||||||||
Sbjct: 247 gcagaggcagtcgaggcagca 267
to top
>ref|XM_549123.2| PREDICTED: Canis familiaris similar to nucleosome assembly protein
           1-like 3 (LOC492003), mRNA
          Length = 1863

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 300 tagttgcagcagcagcagaggcagt 324
           |||||||||||||||||| ||||||
Sbjct: 567 tagttgcagcagcagcagcggcagt 591
to top
>ref|XM_857388.1| PREDICTED: Canis familiaris similar to Axin 2 (Axis inhibition
            protein 2) (Conductin) (Axin-like protein) (Axil),
            transcript variant 3 (LOC490903), mRNA
          Length = 2611

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 304  tgcagcagcagcagaggcagt 324
            |||||||||||||||||||||
Sbjct: 1787 tgcagcagcagcagaggcagt 1807
to top
>gb|AC117206.3| Mus musculus BAC clone RP23-260L17 from 5, complete sequence
          Length = 183385

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 81     aaacaattgaaagtaaaagaa 101
              |||||||||||||||||||||
Sbjct: 124744 aaacaattgaaagtaaaagaa 124724
to top
>emb|X58256.1|BTCLG Bovine CLG mRNA for collagenase
          Length = 2025

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 305 gcagcagcagcagaggcagtc 325
           |||||||||||||||||||||
Sbjct: 39  gcagcagcagcagaggcagtc 19
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 314      gcagaggcagtcgaggcagca 334
                |||||||||||||||||||||
Sbjct: 20538125 gcagaggcagtcgaggcagca 20538145
to top
>gb|AC009796.6|AC009796 Homo sapiens chromosome 11, clone RP11-211E17, complete sequence
          Length = 192239

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 277    gtccatggcggccatggctgg 297
              |||||||||||||||||||||
Sbjct: 130976 gtccatggcggccatggctgg 130956
to top
>gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
              BACR48B07, complete sequence
          Length = 170307

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    gcagcagcagcagaggcagtc 325
              |||||||||||||||||||||
Sbjct: 163415 gcagcagcagcagaggcagtc 163435
to top
>gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
              BACR05C15, complete sequence
          Length = 174426

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    gcagcagcagcagaggcagtc 325
              |||||||||||||||||||||
Sbjct: 113936 gcagcagcagcagaggcagtc 113956
to top
>gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
             BACR13P08, complete sequence
          Length = 169707

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   gcagcagcagcagaggcagtc 325
             |||||||||||||||||||||
Sbjct: 10260 gcagcagcagcagaggcagtc 10280
to top
>gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain transcription factor Prospero
            (pros) gene, complete cds
          Length = 9907

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 305  gcagcagcagcagaggcagtc 325
            |||||||||||||||||||||
Sbjct: 8538 gcagcagcagcagaggcagtc 8558
to top
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0077J18
          Length = 180944

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    gcagaggcagtcgaggcagca 334
              |||||||||||||||||||||
Sbjct: 119235 gcagaggcagtcgaggcagca 119255
to top
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0007H12
          Length = 150881

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   gcagaggcagtcgaggcagca 334
             |||||||||||||||||||||
Sbjct: 29204 gcagaggcagtcgaggcagca 29224
to top
>gb|AE003691.4| Drosophila melanogaster chromosome 3R, section 29 of 118 of the complete
              sequence
          Length = 266829

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    gcagcagcagcagaggcagtc 325
              |||||||||||||||||||||
Sbjct: 134206 gcagcagcagcagaggcagtc 134226
to top
>emb|BX629358.1|CNS09SBU Tetraodon nigroviridis BAC sequence
          Length = 157345

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 349    agcagcagaagcagcacaacg 369
              |||||||||||||||||||||
Sbjct: 140344 agcagcagaagcagcacaacg 140324
to top
>gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, complete sequence
          Length = 134662

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tattgtgaaaggcagtacag 165
             ||||||||||||||||||||
Sbjct: 85011 tattgtgaaaggcagtacag 85030
to top
>gb|BT016620.1| Zea mays clone Contig453 mRNA sequence
          Length = 1612

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gcagcagaagcagcacaacg 369
           ||||||||||||||||||||
Sbjct: 346 gcagcagaagcagcacaacg 327
to top
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0031O09, complete sequence
          Length = 161339

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   gacactagacacacatatat 218
             ||||||||||||||||||||
Sbjct: 92241 gacactagacacacatatat 92260
to top
>gb|AC124977.8| Mus musculus chromosome 7, clone RP24-89J20, complete sequence
          Length = 239915

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   gcagcagcagaggcagtcgaggca 331
             ||||||||||||||||| ||||||
Sbjct: 93428 gcagcagcagaggcagtggaggca 93451
to top
>ref|XM_419445.1| PREDICTED: Gallus gallus similar to Trerf1 protein (LOC421386),
           mRNA
          Length = 3736

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 762 gcagcagcagcagaggcagt 781
to top
>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   gacactagacacacatatat 218
             ||||||||||||||||||||
Sbjct: 95430 gacactagacacacatatat 95411
to top
>ref|XM_879525.1| PREDICTED: Bos taurus similar to v-abl Abelson murine leukemia viral
            oncogene homolog 2 isoform a, transcript variant 6
            (LOC511845), mRNA
          Length = 3646

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  agcagaggcagtcgaggcag 332
            ||||||||||||||||||||
Sbjct: 1637 agcagaggcagtcgaggcag 1618
to top
>ref|XM_879497.1| PREDICTED: Bos taurus similar to v-abl Abelson murine leukemia viral
            oncogene homolog 2 isoform a, transcript variant 5
            (LOC511845), mRNA
          Length = 3550

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  agcagaggcagtcgaggcag 332
            ||||||||||||||||||||
Sbjct: 1637 agcagaggcagtcgaggcag 1618
to top
>ref|XM_879465.1| PREDICTED: Bos taurus similar to v-abl Abelson murine leukemia viral
            oncogene homolog 2 isoform a, transcript variant 4
            (LOC511845), mRNA
          Length = 3379

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  agcagaggcagtcgaggcag 332
            ||||||||||||||||||||
Sbjct: 1679 agcagaggcagtcgaggcag 1660
to top
>ref|XM_879434.1| PREDICTED: Bos taurus similar to v-abl Abelson murine leukemia viral
            oncogene homolog 2 isoform a, transcript variant 3
            (LOC511845), mRNA
          Length = 3604

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  agcagaggcagtcgaggcag 332
            ||||||||||||||||||||
Sbjct: 1595 agcagaggcagtcgaggcag 1576
to top
>ref|XM_866988.1| PREDICTED: Bos taurus similar to v-abl Abelson murine leukemia viral
            oncogene homolog 2 isoform a, transcript variant 2
            (LOC511845), mRNA
          Length = 3694

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  agcagaggcagtcgaggcag 332
            ||||||||||||||||||||
Sbjct: 1685 agcagaggcagtcgaggcag 1666
to top
>gb|AY554355.1| Takifugu rubripes claudin 11b (cldn11b) gene, complete cds
          Length = 6531

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 529  ctccaagggttgtgctctgctccg 552
            |||||||||||| |||||||||||
Sbjct: 5141 ctccaagggttgagctctgctccg 5164
to top
>ref|XM_322479.1| Neurospora crassa OR74A predicted protein (NCU00394.1) partial mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 305 gcagcagcagcagaggcagtcgaggcag 332
           |||||||||||||  |||||||||||||
Sbjct: 35  gcagcagcagcagcagcagtcgaggcag 8
to top
>ref|XM_952187.1| Neurospora crassa OR74A hypothetical protein (NCU00394.1) partial
           mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 305 gcagcagcagcagaggcagtcgaggcag 332
           |||||||||||||  |||||||||||||
Sbjct: 35  gcagcagcagcagcagcagtcgaggcag 8
to top
>ref|XM_605127.2| PREDICTED: Bos taurus similar to polymerase (RNA) II (DNA directed)
           polypeptide B (LOC526753), partial mRNA
          Length = 790

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 gcgtcgtacatcttggcaaa 475
           ||||||||||||||||||||
Sbjct: 66  gcgtcgtacatcttggcaaa 47
to top
>ref|XM_659361.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6849.2), mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ggcagtcgaggcagcactcg 338
           ||||||||||||||||||||
Sbjct: 496 ggcagtcgaggcagcactcg 515
to top
>gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    gcagcagcagcagaggcagt 324
              ||||||||||||||||||||
Sbjct: 130612 gcagcagcagcagaggcagt 130593
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 199      gacactagacacacatatat 218
                ||||||||||||||||||||
Sbjct: 28912135 gacactagacacacatatat 28912116
to top
>emb|Z79758.1|CEW10D5 Caenorhabditis elegans Cosmid W10D5, complete sequence
          Length = 21733

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 348 tagcagcagaagcagcacaa 367
           ||||||||||||||||||||
Sbjct: 337 tagcagcagaagcagcacaa 318
to top
>gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 3 of
              11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     taaacaattgaaagtaaaag 99
              ||||||||||||||||||||
Sbjct: 170464 taaacaattgaaagtaaaag 170445
to top
>gb|AC116594.4| Mus musculus BAC clone RP24-127F20 from 19, complete sequence
          Length = 201360

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gcagcagcagcagaggcagt 324
             ||||||||||||||||||||
Sbjct: 37943 gcagcagcagcagaggcagt 37924
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>gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, complete sequence
          Length = 209224

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gcagcagcagcagaggcagt 324
             ||||||||||||||||||||
Sbjct: 61215 gcagcagcagcagaggcagt 61234
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>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence
          Length = 218079

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  tattgtgaaaggcagtacag 165
            ||||||||||||||||||||
Sbjct: 8266 tattgtgaaaggcagtacag 8285
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>gb|U49945.1| Caenorhabditis elegans cosmid C02H7, complete sequence
          Length = 34671

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   catatatatgcttattgtga 153
             ||||||||||||||||||||
Sbjct: 30230 catatatatgcttattgtga 30249
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>ref|NM_001009694.1| Rattus norvegicus ribose-phosphate pyrophosphokinase I -like
           (LOC314140), mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 322 gcagcagcagcagaggcagt 341
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>gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete sequence
          Length = 125368

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aaagtaaacaattgaaagtaaaag 99
             |||||||||| |||||||||||||
Sbjct: 73602 aaagtaaacagttgaaagtaaaag 73579
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>emb|AL445226.9| Human DNA sequence from clone RP11-261F2 on chromosome 13, complete
             sequence
          Length = 56239

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    taaacaattgaaagtaaaag 99
             ||||||||||||||||||||
Sbjct: 27357 taaacaattgaaagtaaaag 27338
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>emb|AL390715.23| Human DNA sequence from clone RP11-167O6 on chromosome 10 Contains the
             ARHGAP12 gene for Rho GTPase activating protein 12 and two
             CpG islands, complete sequence
          Length = 189161

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    tatgaaaaggctgtaaagta 81
             ||||||||||||||||||||
Sbjct: 96765 tatgaaaaggctgtaaagta 96746
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>emb|AL139148.12| Human DNA sequence from clone RP4-630J13 on chromosome 1p12-13.3
            Contains a high density lipoprotein binding protein
            (vigilin) (HDLBP) pseudogene, complete sequence
          Length = 92514

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   attgaaagtaaaagaaagcc 105
            ||||||||||||||||||||
Sbjct: 3370 attgaaagtaaaagaaagcc 3389
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>gb|AF472304.1|F472304S01 Mus musculus Ruk protein (Sh3kbp1) gene, exon 1
          Length = 574

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 317 gcagcagcagcagaggcagt 336
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>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete
              sequence
          Length = 234105

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 88     tgaaagtaaaagaaagccacaacc 111
              ||||| ||||||||||||||||||
Sbjct: 132334 tgaaaataaaagaaagccacaacc 132357
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>gb|AC158198.2| Physcomitrella patens clone JGIASYB-1A13, complete sequence
          Length = 35440

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  atatatgcttattgtgaaag 156
            ||||||||||||||||||||
Sbjct: 4157 atatatgcttattgtgaaag 4138
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>gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, complete sequence
          Length = 118504

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    tgcagcagcagcagaggcag 323
              ||||||||||||||||||||
Sbjct: 114460 tgcagcagcagcagaggcag 114479
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>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 72022

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tatctgatacagttcttctg 188
             ||||||||||||||||||||
Sbjct: 52153 tatctgatacagttcttctg 52134
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>dbj|AK141290.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430021P12
            product:unclassifiable, full insert sequence
          Length = 3109

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 308  gcagcagcagaggcagtcgaggca 331
            ||||||||||||||||| ||||||
Sbjct: 1167 gcagcagcagaggcagtggaggca 1144
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>dbj|AK172022.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830031B02 product:SH3-domain kinase
           binding protein 1, full insert sequence
          Length = 3395

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 204 gcagcagcagcagaggcagt 223
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>gb|AC010292.8| Homo sapiens chromosome 5 clone CTB-131H22, complete sequence
          Length = 56767

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   tgcagcagcagcagaggcag 323
             ||||||||||||||||||||
Sbjct: 16780 tgcagcagcagcagaggcag 16799
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>dbj|AK080930.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430213G06 product:SH3-domain
           kinase binding protein 1, full insert sequence
          Length = 3537

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 88  gcagcagcagcagaggcagt 107
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>dbj|AK049182.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330011K06 product:SH3-domain kinase binding
           protein 1, full insert sequence
          Length = 3388

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 224 gcagcagcagcagaggcagt 243
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 199      gacactagacacacatatat 218
                ||||||||||||||||||||
Sbjct: 29003557 gacactagacacacatatat 29003538
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>gb|AC104599.4| Homo sapiens BAC clone RP11-652K9 from 2, complete sequence
          Length = 80146

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   tatatatgcttattgtgaaaggca 159
             |||| |||||||||||||||||||
Sbjct: 19264 tatacatgcttattgtgaaaggca 19287
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>gb|AC079895.7| Homo sapiens BAC clone RP11-749M12 from 2, complete sequence
          Length = 149309

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 136  tatatatgcttattgtgaaaggca 159
            |||| |||||||||||||||||||
Sbjct: 8396 tatacatgcttattgtgaaaggca 8419
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>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence
          Length = 198374

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 36     gggaaatgtctagtccagaaatag 59
              ||||||| ||||||||||||||||
Sbjct: 138684 gggaaatttctagtccagaaatag 138707
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>gb|AC133282.7| Mus musculus chromosome 15, clone RP24-408B1, complete sequence
          Length = 183129

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   ttattgtgaaaggcagtaca 164
             ||||||||||||||||||||
Sbjct: 97772 ttattgtgaaaggcagtaca 97791
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>gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, complete sequence
          Length = 204942

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gtacagaaatatctgataca 179
              ||||||||||||||||||||
Sbjct: 116343 gtacagaaatatctgataca 116324
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>gb|AY196298.1| Mus musculus Igh locus, 5' flanking sequence containing
             hypersensitivity sites
          Length = 19556

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gcagcagcagcagaggcagt 324
             ||||||||||||||||||||
Sbjct: 15662 gcagcagcagcagaggcagt 15643
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>gb|AC026624.8| Homo sapiens chromosome 15, clone RP11-652P10, complete sequence
          Length = 143709

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   tatatatgcttattgtgaaa 155
             ||||||||||||||||||||
Sbjct: 94589 tatatatgcttattgtgaaa 94608
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>gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, complete sequence
          Length = 209668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    gtacagaaatatctgataca 179
              ||||||||||||||||||||
Sbjct: 170834 gtacagaaatatctgataca 170853
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>gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, complete sequence
          Length = 198138

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   gcagcagcagaggcagtcgaggca 331
             ||||||||||||||||| ||||||
Sbjct: 12425 gcagcagcagaggcagtggaggca 12448
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>gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromosome 7, complete
             sequence
          Length = 201977

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gcagcagcagcagaggcagt 324
             ||||||||||||||||||||
Sbjct: 31446 gcagcagcagcagaggcagt 31427
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>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete
             sequence
          Length = 182382

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   agacacacatatatgcttat 224
             ||||||||||||||||||||
Sbjct: 41478 agacacacatatatgcttat 41459
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>dbj|AP002449.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-773H22, complete
              sequence
          Length = 184000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    agacacacatatatgcttat 224
              ||||||||||||||||||||
Sbjct: 174229 agacacacatatatgcttat 174210
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>dbj|AP003400.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-643G5, complete
             sequence
          Length = 135637

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gtaaacaattgaaagtaaaa 98
             ||||||||||||||||||||
Sbjct: 49937 gtaaacaattgaaagtaaaa 49918
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>gb|DQ288846.1| Brassica oleracea var. botrytis NADH dehydrogenase subunit 6 mRNA,
           partial cds; mitochondrial
          Length = 602

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 taaaataagactagaaacca 135
           ||||||||||||||||||||
Sbjct: 477 taaaataagactagaaacca 458
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>gb|AC132414.4| Mus musculus BAC clone RP23-383E9 from 12, complete sequence
          Length = 185894

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gcagcagcagcagaggcagt 324
             ||||||||||||||||||||
Sbjct: 67077 gcagcagcagcagaggcagt 67096
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>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    taaaataagactagaaacca 135
              ||||||||||||||||||||
Sbjct: 193864 taaaataagactagaaacca 193845
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>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome
          Length = 105340

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   taaaataagactagaaacca 135
             ||||||||||||||||||||
Sbjct: 60618 taaaataagactagaaacca 60599
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>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    taaaataagactagaaacca 135
              ||||||||||||||||||||
Sbjct: 312987 taaaataagactagaaacca 313006
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    taaaataagactagaaacca 135
              ||||||||||||||||||||
Sbjct: 430402 taaaataagactagaaacca 430421
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>gb|U81831.1|HSU81831 Human cosmid LL12NCO1-67C6, ETV6 gene, intron 1A, partial sequence
          Length = 38674

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   tatctgatacagttcttctg 188
             ||||||||||||||||||||
Sbjct: 27579 tatctgatacagttcttctg 27598
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>emb|AL671706.8| Mouse DNA sequence from clone RP23-330O24 on chromosome X, complete
             sequence
          Length = 192676

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    tgaaagtaaaagaaagccacaacc 111
             ||||| ||||||||||||||||||
Sbjct: 27293 tgaaaataaaagaaagccacaacc 27316
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>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete
              sequence
          Length = 227918

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    gcagcagcagcagaggcagt 324
              ||||||||||||||||||||
Sbjct: 224391 gcagcagcagcagaggcagt 224410
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>gb|BC088149.1| Rattus norvegicus ribose-phosphate pyrophosphokinase I -like, mRNA
           (cDNA clone MGC:108713 IMAGE:7380332), complete cds
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gcagcagcagcagaggcagt 324
           ||||||||||||||||||||
Sbjct: 322 gcagcagcagcagaggcagt 341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,742,650
Number of Sequences: 3902068
Number of extensions: 5742650
Number of successful extensions: 147445
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 146719
Number of HSP's gapped (non-prelim): 719
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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