| Clone Name | rbags18f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U02690.1|TAU02690 Triticum aestivum imidazoleglycerolphosphate dehydratase mRNA, partial cds Length = 1414 Score = 613 bits (309), Expect = e-172 Identities = 499/561 (88%), Gaps = 6/561 (1%) Strand = Plus / Minus Query: 149 agcagatacattgtgccaatggtagcaacataaacaaaccctgacgacaagatggcaggt 208 |||||||||| | |||||||||||| || |||||||||||||||| ||| ||| || | Sbjct: 1235 agcagatacagtatgccaatggtagtaagataaacaaaccctgacaacaggataacaagc 1176 Query: 209 catttcgacgctcttcttgttgcaagcccagcggactccaagcgcaagtagcaacagaga 268 ||||| | ||| |||||||| ||| ||| ||||||| |||| ||||||||| |||||| Sbjct: 1175 aatttccatgctgttcttgttccaaaccccgcggactgcaagtccaagtagcagcagaga 1116 Query: 269 tgtagtaggcgaccgtccatctgtccacttcgagggcgaatggcgtgcatccagtttttg 328 ||| ||||||||| |||| ||| ||| |||||||||| |||||| ||||||||| | Sbjct: 1115 catagcaggcgaccgcccatgtgttt-ctttgagggcgaatagcgtgcgtccagttttcg 1057 Query: 329 gtcttgcg-----acactacgaccttgacagaacacctttcgagctgggtatagtgccac 383 |||||| |||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 1056 atcttgcattgcaacactaagaccttgacagaacaccttttgagcttggcatagtgccct 997 Query: 384 gtcggcgtaagtcatattccgttgcttgtcgaagcgccctggcaaatgctttgaaagttg 443 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 ggcggcgtaagtcatattccgttgcttgtcgaagcgccctggcaaatgctttgaaagttg 937 Query: 444 cctcaataatatggtgcgagttgttccccgcaagctgacggatgtgaagcgtcatcccag 503 |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 936 cctcgataatatggtgtgagttgtttcccgcaagctgacggatgtgaagcgtcatgccag 877 Query: 504 atgtattcacaagggactggaaaaagtgctcaactagctgtgtatcatatgtcccaactc 563 |||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||| Sbjct: 876 atgtattcacaagggactggaagaaatgctcaactagctgtgtgtcatatgtgccaactc 817 Query: 564 tctcagtaggaatactcaagccacagctcaaatgaggtcgaccagatagatccagtataa 623 | || |||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 816 tttcggtaggaatgcttaagccgcagctcaaatgaggtcgaccagatagatccagtataa 757 Query: 624 cctcaactgctgcctcatcaagtggtgctgtaaaatgtccaaaccggttgattccttttc 683 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 756 cctcaactgctgcctcatcaagtggtgctgtaaaatgcccaaaccggttaattccttttc 697 Query: 684 ggtcaccaagtgcttgaagta 704 ||||||||||||||||||||| Sbjct: 696 ggtcaccaagtgcttgaagta 676 Score = 42.1 bits (21), Expect = 2.4 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Minus Query: 30 aatccatatttcagaggtataaataa-tttcagaatgtcaagtcgtttgcagccttt-ca 87 ||||||||| ||||||||| |||| ||||||||||||||| ||| |||||| ||| || Sbjct: 1332 aatccatatatcagaggta---ataactttcagaatgtcaagccgtctgcagcttttaca 1276 Query: 88 tcttcag 94 ||||||| Sbjct: 1275 tcttcag 1269
>dbj|AK073351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I19, full insert sequence Length = 1315 Score = 460 bits (232), Expect = e-126 Identities = 334/368 (90%) Strand = Plus / Minus Query: 337 acactacgaccttgacagaacacctttcgagctgggtatagtgccacgtcggcgtaagtc 396 |||||| |||||||||| |||||||| |||||||| | |||||| |||||||| ||||| Sbjct: 900 acactatgaccttgacaacacaccttttgagctggggacagtgccgcgtcggcgcaagtc 841 Query: 397 atattccgttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatg 456 |||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 840 atattctgttgcttgtcgaagggctctagcaaatgctttgaaagttgcctcaataatatg 781 Query: 457 gtgcgagttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaag 516 ||| ||||| || || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 780 gtgtgagttttttccagcaagctgacggatgtgaagtgtcatcccagatgtattcacaag 721 Query: 517 ggactggaaaaagtgctcaactagctgtgtatcatatgtcccaactctctcagtaggaat 576 || ||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 720 agattggaaaaagtgctcaactagctgagtatcgtatgtgccaactctctcagtcggaat 661 Query: 577 actcaagccacagctcaaatgaggtcgaccagatagatccagtataacctcaactgctgc 636 ||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 660 acttaagccgcaactcaaatgaggacgaccagatagatccagtataacctcaaccgctgc 601 Query: 637 ctcatcaagtggtgctgtaaaatgtccaaaccggttgattccttttcggtcaccaagtgc 696 |||||||||||||||||||||||| |||||||| || ||||||||||| || |||||||| Sbjct: 600 ctcatcaagtggtgctgtaaaatgcccaaaccgattaattccttttcgatctccaagtgc 541 Query: 697 ttgaagta 704 || ||||| Sbjct: 540 ttcaagta 533
>ref|XM_473903.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 454 bits (229), Expect = e-124 Identities = 328/361 (90%) Strand = Plus / Minus Query: 344 gaccttgacagaacacctttcgagctgggtatagtgccacgtcggcgtaagtcatattcc 403 |||||||||| |||||||| |||||||| | |||||| |||||||| ||||||||||| Sbjct: 806 gaccttgacaacacaccttttgagctggggacagtgccgcgtcggcgcaagtcatattct 747 Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 746 gttgcttgtcgaagggctctagcaaatgctttgaaagttgcctcaataatatggtgtgag 687 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || || || |||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 686 ttttttccagcaagctgacggatgtgaagtgtcatcccagatgtattcacaagagattgg 627 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctctcagtaggaatactcaag 583 |||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 626 aaaaagtgctcaactagctgagtatcgtatgtgccaactctctcagtcggaatacttaag 567 Query: 584 ccacagctcaaatgaggtcgaccagatagatccagtataacctcaactgctgcctcatca 643 || || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 566 ccgcaactcaaatgaggacgaccagatagatccagtataacctcaaccgctgcctcatca 507 Query: 644 agtggtgctgtaaaatgtccaaaccggttgattccttttcggtcaccaagtgcttgaagt 703 ||||||||||||||||| |||||||| || ||||||||||| || |||||||||| |||| Sbjct: 506 agtggtgctgtaaaatgcccaaaccgattaattccttttcgatctccaagtgcttcaagt 447 Query: 704 a 704 | Sbjct: 446 a 446
>gb|BT018791.1| Zea mays clone EL01N0527H02.d mRNA sequence Length = 1272 Score = 327 bits (165), Expect = 3e-86 Identities = 303/349 (86%) Strand = Plus / Minus Query: 356 acacctttcgagctgggtatagtgccacgtcggcgtaagtcatattccgttgcttgtcga 415 |||||||| |||||||| | |||||| | ||||| | |||||| || ||||| |||||| Sbjct: 818 acacctttggagctggggacagtgccttgacggcgcaggtcatactctgttgcctgtcga 759 Query: 416 agcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgagttgttccccgca 475 || |||| ||||| |||||||||| |||||| || |||||||| ||||| ||||| ||| Sbjct: 758 agggcccgagcaaacgctttgaaagatgcctcgatgatatggtgtgagtttttcccagca 699 Query: 476 agctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctca 535 ||||||||||||||||| |||||||||||||| ||||| | || ||||| ||||||||| Sbjct: 698 agctgacggatgtgaagagtcatcccagatgtgttcaccacagattggaagaagtgctca 639 Query: 536 actagctgtgtatcatatgtcccaactctctcagtaggaatactcaagccacagctcaaa 595 || ||||||||||||||||| |||||||| | |||||||||| ||||||||||| ||| Sbjct: 638 accagctgtgtatcatatgtgccaactctttgagtaggaatatctaagccacagcttaaa 579 Query: 596 tgaggtcgaccagatagatccagtataacctcaactgctgcctcatcaagtggtgctgta 655 ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 578 tgagggcgaccagacagatccagtataacctcaaccgctgcctcatcaagcggtgctgta 519 Query: 656 aaatgtccaaaccggttgattccttttcggtcaccaagtgcttgaagta 704 ||||| ||||| ||||| ||||| ||||| ||||||||||||| ||||| Sbjct: 518 aaatgaccaaatcggttaattccctttcgatcaccaagtgcttcaagta 470
>gb|AY108347.1| Zea mays PCO100071 mRNA sequence Length = 1294 Score = 327 bits (165), Expect = 3e-86 Identities = 303/349 (86%) Strand = Plus / Minus Query: 356 acacctttcgagctgggtatagtgccacgtcggcgtaagtcatattccgttgcttgtcga 415 |||||||| |||||||| | |||||| | ||||| | |||||| || ||||| |||||| Sbjct: 838 acacctttggagctggggacagtgccttgacggcgcaggtcatactctgttgcctgtcga 779 Query: 416 agcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgagttgttccccgca 475 || |||| ||||| |||||||||| |||||| || |||||||| ||||| ||||| ||| Sbjct: 778 agggcccgagcaaacgctttgaaagatgcctcgatgatatggtgtgagtttttcccagca 719 Query: 476 agctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctca 535 ||||||||||||||||| |||||||||||||| ||||| | || ||||| ||||||||| Sbjct: 718 agctgacggatgtgaagagtcatcccagatgtgttcaccacagattggaagaagtgctca 659 Query: 536 actagctgtgtatcatatgtcccaactctctcagtaggaatactcaagccacagctcaaa 595 || ||||||||||||||||| |||||||| | |||||||||| ||||||||||| ||| Sbjct: 658 accagctgtgtatcatatgtgccaactctttgagtaggaatatctaagccacagcttaaa 599 Query: 596 tgaggtcgaccagatagatccagtataacctcaactgctgcctcatcaagtggtgctgta 655 ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 598 tgagggcgaccagacagatccagtataacctcaaccgctgcctcatcaagcggtgctgta 539 Query: 656 aaatgtccaaaccggttgattccttttcggtcaccaagtgcttgaagta 704 ||||| ||||| ||||| ||||| ||||| ||||||||||||| ||||| Sbjct: 538 aaatgaccaaatcggttaattccctttcgatcaccaagtgcttcaagta 490
>gb|U49978.1|PSU49978 Pisum sativum imidazoleglycerol-phosphate dehydratase (PSHIS3) mRNA, complete cds Length = 1229 Score = 133 bits (67), Expect = 9e-28 Identities = 154/183 (84%) Strand = Plus / Minus Query: 394 gtcatattccgttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataat 453 ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| |||||||| Sbjct: 826 gtcatattctgttgcttgtcgaagagcccttgcaaacgctttgaaagttgcttcaataat 767 Query: 454 atggtgcgagttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcac 513 ||| || ||||| | || |||||||| || |||||||| ||||| ||||| |||||||| Sbjct: 766 atgatgagagtttcttccagcaagctggcgaatgtgaagtgtcataccagaagtattcac 707 Query: 514 aagggactggaaaaagtgctcaactagctgtgtatcatatgtcccaactctctcagtagg 573 | ||||||| ||| ||||| || | ||| || |||||||||||||| |||| ||| || Sbjct: 706 tatagactggagaaaatgctccaccacctgcgtgtcatatgtcccaaccctctgagtggg 647 Query: 574 aat 576 ||| Sbjct: 646 aat 644
>emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093O08, complete sequence Length = 148860 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 376 agtgccacgtcggcgtaagtcatattccgttgcttgtcgaagcgccctggcaaatgcttt 435 |||||| |||||||| ||||||||||| |||||||||||||| || || ||||||||||| Sbjct: 123446 agtgccgcgtcggcgcaagtcatattctgttgcttgtcgaagggctctagcaaatgcttt 123387 Query: 436 gaaagttgcctcaataatatggtgcgagttgttccccgcaagct 479 |||||||||||||||||||||||| ||||| || || ||||||| Sbjct: 123386 gaaagttgcctcaataatatggtgtgagttttttccagcaagct 123343 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 615 ccagtataacctcaactgctgcctcatcaagtggtgctgtaaaatgtccaaaccggttga 674 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || | Sbjct: 122251 ccagtataacctcaaccgctgcctcatcaagtggtgctgtaaaatgcccaaaccgattaa 122192 Query: 675 ttccttttcggtcaccaagtgcttgaagta 704 |||||||||| || |||||||||| ||||| Sbjct: 122191 ttccttttcgatctccaagtgcttcaagta 122162 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 478 ctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctcaac 537 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 123154 ctgacggatgtgaagtgtcatcccagatgtattcacaagagattggaaaaagtgctcaac 123095 Query: 538 tagctg 543 |||||| Sbjct: 123094 tagctg 123089 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 545 gtatcatatgtcccaactctctcagtaggaatactcaagccacagctcaaatgaggtcga 604 ||||| ||||| |||||||||||||| |||||||| ||||| || ||||||||||| ||| Sbjct: 122782 gtatcgtatgtgccaactctctcagtcggaatacttaagccgcaactcaaatgaggacga 122723 Query: 605 ccagatagatcc 616 |||||||||||| Sbjct: 122722 ccagatagatcc 122711
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 376 agtgccacgtcggcgtaagtcatattccgttgcttgtcgaagcgccctggcaaatgcttt 435 |||||| |||||||| ||||||||||| |||||||||||||| || || ||||||||||| Sbjct: 4321 agtgccgcgtcggcgcaagtcatattctgttgcttgtcgaagggctctagcaaatgcttt 4262 Query: 436 gaaagttgcctcaataatatggtgcgagttgttccccgcaagct 479 |||||||||||||||||||||||| ||||| || || ||||||| Sbjct: 4261 gaaagttgcctcaataatatggtgtgagttttttccagcaagct 4218 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 615 ccagtataacctcaactgctgcctcatcaagtggtgctgtaaaatgtccaaaccggttga 674 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || | Sbjct: 3126 ccagtataacctcaaccgctgcctcatcaagtggtgctgtaaaatgcccaaaccgattaa 3067 Query: 675 ttccttttcggtcaccaagtgcttgaagta 704 |||||||||| || |||||||||| ||||| Sbjct: 3066 ttccttttcgatctccaagtgcttcaagta 3037 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 478 ctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctcaac 537 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 4029 ctgacggatgtgaagtgtcatcccagatgtattcacaagagattggaaaaagtgctcaac 3970 Query: 538 tagctg 543 |||||| Sbjct: 3969 tagctg 3964 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 545 gtatcatatgtcccaactctctcagtaggaatactcaagccacagctcaaatgaggtcga 604 ||||| ||||| |||||||||||||| |||||||| ||||| || ||||||||||| ||| Sbjct: 3657 gtatcgtatgtgccaactctctcagtcggaatacttaagccgcaactcaaatgaggacga 3598 Query: 605 ccagatagatcc 616 |||||||||||| Sbjct: 3597 ccagatagatcc 3586
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 376 agtgccacgtcggcgtaagtcatattccgttgcttgtcgaagcgccctggcaaatgcttt 435 |||||| |||||||| ||||||||||| |||||||||||||| || || ||||||||||| Sbjct: 31426638 agtgccgcgtcggcgcaagtcatattctgttgcttgtcgaagggctctagcaaatgcttt 31426579 Query: 436 gaaagttgcctcaataatatggtgcgagttgttccccgcaagct 479 |||||||||||||||||||||||| ||||| || || ||||||| Sbjct: 31426578 gaaagttgcctcaataatatggtgtgagttttttccagcaagct 31426535 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 615 ccagtataacctcaactgctgcctcatcaagtggtgctgtaaaatgtccaaaccggttga 674 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || | Sbjct: 31425443 ccagtataacctcaaccgctgcctcatcaagtggtgctgtaaaatgcccaaaccgattaa 31425384 Query: 675 ttccttttcggtcaccaagtgcttgaagta 704 |||||||||| || |||||||||| ||||| Sbjct: 31425383 ttccttttcgatctccaagtgcttcaagta 31425354 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 478 ctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctcaac 537 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 31426346 ctgacggatgtgaagtgtcatcccagatgtattcacaagagattggaaaaagtgctcaac 31426287 Query: 538 tagctg 543 |||||| Sbjct: 31426286 tagctg 31426281 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 545 gtatcatatgtcccaactctctcagtaggaatactcaagccacagctcaaatgaggtcga 604 ||||| ||||| |||||||||||||| |||||||| ||||| || ||||||||||| ||| Sbjct: 31425974 gtatcgtatgtgccaactctctcagtcggaatacttaagccgcaactcaaatgaggacga 31425915 Query: 605 ccagatagatcc 616 |||||||||||| Sbjct: 31425914 ccagatagatcc 31425903
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 376 agtgccacgtcggcgtaagtcatattccgttgcttgtcgaagcgccctggcaaatgcttt 435 |||||| |||||||| ||||||||||| |||||||||||||| || || ||||||||||| Sbjct: 46573 agtgccgcgtcggcgcaagtcatattctgttgcttgtcgaagggctctagcaaatgcttt 46514 Query: 436 gaaagttgcctcaataatatggtgcgagttgttccccgcaagct 479 |||||||||||||||||||||||| ||||| || || ||||||| Sbjct: 46513 gaaagttgcctcaataatatggtgtgagttttttccagcaagct 46470 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 615 ccagtataacctcaactgctgcctcatcaagtggtgctgtaaaatgtccaaaccggttga 674 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || | Sbjct: 45380 ccagtataacctcaaccgctgcctcatcaagtggtgctgtaaaatgcccaaaccgattaa 45321 Query: 675 ttccttttcggtcaccaagtgcttgaagta 704 |||||||||| || |||||||||| ||||| Sbjct: 45320 ttccttttcgatctccaagtgcttcaagta 45291 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 478 ctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctcaac 537 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 46281 ctgacggatgtgaagtgtcatcccagatgtattcacaagagattggaaaaagtgctcaac 46222 Query: 538 tagctg 543 |||||| Sbjct: 46221 tagctg 46216 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 545 gtatcatatgtcccaactctctcagtaggaatactcaagccacagctcaaatgaggtcga 604 ||||| ||||| |||||||||||||| |||||||| ||||| || ||||||||||| ||| Sbjct: 45908 gtatcgtatgtgccaactctctcagtcggaatacttaagccgcaactcaaatgaggacga 45849 Query: 605 ccagatagatcc 616 |||||||||||| Sbjct: 45848 ccagatagatcc 45837
>ref|NM_180294.1| Arabidopsis thaliana imidazoleglycerol-phosphate dehydratase AT3G22425 transcript variant AT3G22425.2 mRNA, complete cds Length = 1238 Score = 85.7 bits (43), Expect = 2e-13 Identities = 133/163 (81%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 804 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 745 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 744 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 685 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| ||||||||||| |||||||||| Sbjct: 684 aaaaagtgctccaccaactgagtatcatatgttccaactctct 642
>gb|AY087948.1| Arabidopsis thaliana clone 39832 mRNA, complete sequence Length = 1163 Score = 85.7 bits (43), Expect = 2e-13 Identities = 133/163 (81%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 804 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 745 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 744 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaatgactgg 685 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| ||||||||||| |||||||||| Sbjct: 684 aaaaagtgctccaccaactgagtatcatatgttccaactctct 642
>dbj|AK176429.1| Arabidopsis thaliana mRNA for imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL24-18-A02 Length = 1156 Score = 85.7 bits (43), Expect = 2e-13 Identities = 133/163 (81%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 761 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 702 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 701 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 642 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| ||||||||||| |||||||||| Sbjct: 641 aaaaagtgctccaccaactgagtatcatatgttccaactctct 599
>dbj|AK175447.1| Arabidopsis thaliana mRNA for imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL21-87-M08 Length = 1198 Score = 85.7 bits (43), Expect = 2e-13 Identities = 133/163 (81%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 803 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 744 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 743 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 684 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| ||||||||||| |||||||||| Sbjct: 683 aaaaagtgctccaccaactgagtatcatatgttccaactctct 641
>dbj|AK118815.1| Arabidopsis thaliana At3g22425 mRNA for putative imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL21-15-B19 Length = 1189 Score = 85.7 bits (43), Expect = 2e-13 Identities = 133/163 (81%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 804 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 745 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 744 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 685 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| ||||||||||| |||||||||| Sbjct: 684 aaaaagtgctccaccaactgagtatcatatgttccaactctct 642
>gb|AY570533.1| Alyssum lesbiacum imidazole glycerol-phosphate dehydratase (IGPD) mRNA, partial cds Length = 388 Score = 83.8 bits (42), Expect = 7e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 405 ttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgagt 464 |||||||||| || ||||| ||||| || || ||||| ||||| || || || || |||| Sbjct: 388 ttgcttgtcggagagcccttgcaaaggccttaaaagtagcctccatgatgtgatgtgagt 329 Query: 465 tgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgga 524 | || || |||||||| ||||||||||||||||| ||||| |||||||| | ||||||| Sbjct: 328 ttttaccagcaagctgtcggatgtgaagcgtcataccagaagtattcaccaacgactgga 269 Query: 525 aaaagtgctc 534 | |||||||| Sbjct: 268 agaagtgctc 259
>dbj|AK176319.1| Arabidopsis thaliana mRNA for imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL23-29-C18 Length = 1164 Score = 77.8 bits (39), Expect = 4e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 770 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 711 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 710 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 651 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| |||||| |||| |||||||||| Sbjct: 650 aaaaagtgctccaccaactgagtatcacatgttccaactctct 608
>gb|U02689.1|ATU02689 Arabidopsis thaliana imidazoleglycerolphosphate dehydratase mRNA, complete cds Length = 1130 Score = 77.8 bits (39), Expect = 4e-11 Identities = 132/163 (80%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 770 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 711 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| || |||||||| ||||| ||||| |||||||| | |||||| Sbjct: 710 ttttcaccagcgagctgccgaatgtgaagagtcataccagaagtattcaccaacgactgg 651 Query: 524 aaaaagtgctcaactagctgtgtatcatatgtcccaactctct 566 ||||||||||| || | ||| ||||||||||| |||||||||| Sbjct: 650 aaaaagtgctccaccaactgagtatcatatgttccaactctct 608
>ref|NM_180293.1| Arabidopsis thaliana imidazoleglycerol-phosphate dehydratase AT3G22425 transcript variant AT3G22425.1 mRNA, complete cds Length = 1347 Score = 61.9 bits (31), Expect = 3e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 913 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 854 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 853 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 794 Query: 524 aaaaagtgctc 534 ||||||||||| Sbjct: 793 aaaaagtgctc 783
>gb|AY070442.1| Arabidopsis thaliana unknown protein (At3g22422) mRNA, complete cds Length = 1364 Score = 61.9 bits (31), Expect = 3e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 404 gttgcttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgag 463 ||||||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct: 910 gttgcttgtcgtagagctctggcaaacgccttaaacgtcgcctctattatgtgatgagag 851 Query: 464 ttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactgg 523 || | || || ||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 850 ttttcaccagcgagctgccggatgtgaagagtcataccagaagtattcaccaacgactgg 791 Query: 524 aaaaagtgctc 534 ||||||||||| Sbjct: 790 aaaaagtgctc 780
>emb|BX828562.1|CNS0A3HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL17ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1082 Score = 61.9 bits (31), Expect = 3e-06 Identities = 145/183 (79%) Strand = Plus / Minus Query: 349 tgacagaacacctttcgagctgggtatagtgccacgtcggcgtaagtcatattccgttgc 408 ||||| ||| ||||||||||| ||||| || |||| |||||| ||| | || ||||| Sbjct: 789 tgacaaaactcctttcgagcttggtattgtcccaccgcggcgtggatcaaactctgttgc 730 Query: 409 ttgtcgaagcgccctggcaaatgctttgaaagttgcctcaataatatggtgcgagttgtt 468 |||||| || || || ||||| || || || || || || || || || |||||||| || Sbjct: 729 ttgtcggagagctcttgcaaaggccttaaaggtcgcttctattatgtgatgcgagttttt 670 Query: 469 ccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaa 528 || |||||||| ||||||||||| ||||| ||||| |||||||| | |||||||| || Sbjct: 669 accagcaagctgtcggatgtgaagagtcataccagaagtattcaccaatgactggaagaa 610 Query: 529 gtg 531 ||| Sbjct: 609 gtg 607
>ref|NM_117577.3| Arabidopsis thaliana IGPD; imidazoleglycerol-phosphate dehydratase AT4G14910 (IGPD) mRNA, complete cds Length = 1112 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 458 tgcgagttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagg 517 |||||||| || || |||||||| ||||||||||| ||||| ||||| |||||||| | Sbjct: 710 tgcgagtttttaccagcaagctgtcggatgtgaagagtcataccagaagtattcaccaat 651 Query: 518 gactggaaaaagtg 531 |||||||| ||||| Sbjct: 650 gactggaagaagtg 637
>gb|AY094021.1| Arabidopsis thaliana AT4g14910/dl3495c mRNA, complete cds Length = 819 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 458 tgcgagttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagg 517 |||||||| || || |||||||| ||||||||||| ||||| ||||| |||||||| | Sbjct: 701 tgcgagtttttaccagcaagctgtcggatgtgaagagtcataccagaagtattcaccaat 642 Query: 518 gactggaaaaagtg 531 |||||||| ||||| Sbjct: 641 gactggaagaagtg 628
>gb|AY048237.1| Arabidopsis thaliana AT4g14910/dl3495c mRNA, complete cds Length = 1026 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 458 tgcgagttgttccccgcaagctgacggatgtgaagcgtcatcccagatgtattcacaagg 517 |||||||| || || |||||||| ||||||||||| ||||| ||||| |||||||| | Sbjct: 710 tgcgagtttttaccagcaagctgtcggatgtgaagagtcataccagaagtattcaccaat 651 Query: 518 gactggaaaaagtg 531 |||||||| ||||| Sbjct: 650 gactggaagaagtg 637
>dbj|AB022215.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB17 Length = 83205 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 482 cggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtgctc 534 ||||||||||| ||||| ||||| |||||||| | ||||||||||||||||| Sbjct: 72651 cggatgtgaagagtcataccagaagtattcaccaacgactggaaaaagtgctc 72599
>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence Length = 222363 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ataaataatttcagaatgtcaag 70 ||||||||||||||||||||||| Sbjct: 48345 ataaataatttcagaatgtcaag 48323
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ataaataatttcagaatgtcaag 70 ||||||||||||||||||||||| Sbjct: 6104 ataaataatttcagaatgtcaag 6126
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 646 tggtgctgtaaaatgtccaaac 667 |||||||||||||||||||||| Sbjct: 19678 tggtgctgtaaaatgtccaaac 19657
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 482 cggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtg 531 ||||||||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 93940 cggatgtgaagagtcataccagaagtattcaccaatgactggaagaagtg 93989
>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete sequence Length = 294168 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 646 tggtgctgtaaaatgtccaaac 667 |||||||||||||||||||||| Sbjct: 234761 tggtgctgtaaaatgtccaaac 234740
>gb|AF017783.2|AF017783 Drosophila melanogaster alpha NAC, diacylglycerol kinase epsilon and ubiquinol-cytochrome C reductase complex genes, complete cds; and unknown gene Length = 4728 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 646 tggtgctgtaaaatgtccaaac 667 |||||||||||||||||||||| Sbjct: 4237 tggtgctgtaaaatgtccaaac 4258
>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones DS04499, DS06146, and DS00455, complete sequence Length = 145055 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 646 tggtgctgtaaaatgtccaaac 667 |||||||||||||||||||||| Sbjct: 56441 tggtgctgtaaaatgtccaaac 56420
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 482 cggatgtgaagcgtcatcccagatgtattcacaagggactggaaaaagtg 531 ||||||||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 39394 cggatgtgaagagtcataccagaagtattcaccaatgactggaagaagtg 39443
>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the 3' end of a novel gene (FLJ40773) and two novel genes, complete sequence Length = 175463 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 aggtataaataatttcagaat 64 ||||||||||||||||||||| Sbjct: 114295 aggtataaataatttcagaat 114275
>emb|CR318635.8| Zebrafish DNA sequence from clone CH211-253D2 in linkage group 23, complete sequence Length = 154312 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 cagaggtataaataatttcag 61 ||||||||||||||||||||| Sbjct: 8883 cagaggtataaataatttcag 8903
>gb|AY118885.1| Drosophila melanogaster HL07956 full insert cDNA Length = 797 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 tggtgctgtaaaatgtccaaa 666 ||||||||||||||||||||| Sbjct: 21 tggtgctgtaaaatgtccaaa 1
>ref|NM_136974.2| Drosophila melanogaster mitochondrial ribosomal protein L18 CG12373-RA (mRpL18), mRNA Length = 775 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 tggtgctgtaaaatgtccaaa 666 ||||||||||||||||||||| Sbjct: 21 tggtgctgtaaaatgtccaaa 1
>gb|AF023140.1|AF023140 Thlaspi goesingense imidazoleglycerol phosphate dehydratase (THB1) mRNA, partial cds Length = 1042 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 473 gcaagctgacggatgtgaagcgtcatcccagatgtattcac 513 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 693 gcaagctgtcggatgtgaagtgtcatacccgaagtattcac 653
>dbj|AP000806.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-713C6, complete sequence Length = 120480 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ataaataatttcagaatgtca 68 ||||||||||||||||||||| Sbjct: 41818 ataaataatttcagaatgtca 41838
>gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, complete sequence Length = 182866 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 agcaacataaacaaaccctg 191 |||||||||||||||||||| Sbjct: 123970 agcaacataaacaaaccctg 123989
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 ctggcaaatgctttgaaagttgcctcaataat 453 |||||||| |||||||| || ||||||||||| Sbjct: 4098980 ctggcaaaggctttgaaggtcgcctcaataat 4098949
>gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, complete sequence Length = 221034 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 actcaagccacagctcaaat 596 |||||||||||||||||||| Sbjct: 197174 actcaagccacagctcaaat 197193
>gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome 13, complete sequence Length = 190792 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 actcaagccacagctcaaat 596 |||||||||||||||||||| Sbjct: 32035 actcaagccacagctcaaat 32054
>gb|AE005795.1| Caulobacter crescentus CB15 section 121 of 359 of the complete genome Length = 12871 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tccacttcgagggcgaatgg 311 |||||||||||||||||||| Sbjct: 2559 tccacttcgagggcgaatgg 2540
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ctttgaaagttgcctcaata 451 |||||||||||||||||||| Sbjct: 40341788 ctttgaaagttgcctcaata 40341769
>emb|BX820029.1|CNS0A8FQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1439 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 catatgtcccaactctctca 568 |||||||||||||||||||| Sbjct: 665 catatgtcccaactctctca 646
>gb|L10036.1| Anabaena PCC7120 DNA-binding protein (ntcA) gene, complete cds; and unknown genes Length = 4142 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 ctggcaaatgctttgaaagttgcctcaataat 453 |||||||| |||||||| || ||||||||||| Sbjct: 3603 ctggcaaaggctttgaaggtcgcctcaataat 3572
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ctttgaaagttgcctcaata 451 |||||||||||||||||||| Sbjct: 50752 ctttgaaagttgcctcaata 50733
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 422 ctggcaaatgctttgaaagttgcctcaataat 453 |||||||| |||||||| || ||||||||||| Sbjct: 5263309 ctggcaaaggctttgaaggtcgcctcaataat 5263340
>gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, complete sequence Length = 159923 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 636 cctcatcaagtggtgctgta 655 |||||||||||||||||||| Sbjct: 3449 cctcatcaagtggtgctgta 3430
>emb|AL353610.7| Human DNA sequence from clone RP11-8J21 on chromosome 2 Contains ESTs, STSs and GSSs, complete sequence Length = 61513 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tgcagcctttcatcttcagg 95 |||||||||||||||||||| Sbjct: 31437 tgcagcctttcatcttcagg 31418 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,126,637 Number of Sequences: 3902068 Number of extensions: 5126637 Number of successful extensions: 88230 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88042 Number of HSP's gapped (non-prelim): 187 length of query: 704 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 681 effective length of database: 17,143,297,704 effective search space: 11674585736424 effective search space used: 11674585736424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)