| Clone Name | rbags17p20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X63428.1|PMAAT1 P.miliaceum mRNA for aspartate aminotransferase (pmAAT1) Length = 1677 Score = 436 bits (220), Expect = e-119 Identities = 319/352 (90%) Strand = Plus / Minus Query: 348 gtcgttacgccggccatgcttattctcccgttgcgtgtcatgtagatatggtattcactt 407 |||||||| || ||||||||||| ||||||||||| |||||||| |||||| ||||| || Sbjct: 1321 gtcgttacaccagccatgcttatcctcccgttgcgggtcatgtaaatatggaattcattt 1262 Query: 408 gtcaagcggtcgacttgttcaggcgtcatcccactgtagcaaaacattccaatctgattg 467 ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1261 gtcaaccggtcaacttgttcaggtgtcatcccactgtagcagaacattccaatctgatta 1202 Query: 468 gtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaagtgccttc 527 |||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||| || Sbjct: 1201 gtgatgtgctcccatgacaaagatgaacctagcttttcaagattttccttaagtgccgtc 1142 Query: 528 cgcattccaatgatacgatcagccatacccttgacctctcccaaccataagttcttcaat 587 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1141 cgcattccaatgatacgatcagccatacccttgacctcttttaaccataaactcttcaat 1082 Query: 588 tctggatcattaaggataatagaaacaaccagcgcaccatgaacaggtgggttgctgtac 647 ||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1081 tctggatcattgaggattatagaaacaacaagtgcaccatgaacaggtgggttgctgtac 1022 Query: 648 attggtctcgcaatctgttgcaattggctcttaacagcaactgcttgcatct 699 |||||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 1021 attggtcttgcaatctgttgcagttggctcttgacagcaactgcttgcatct 970
>emb|X63430.1|PMAAT3 P.miliaceum mRNA for aspartate aminotransferase (pmAAT3) Length = 1659 Score = 414 bits (209), Expect = e-112 Identities = 350/397 (88%) Strand = Plus / Minus Query: 303 ttggtaacatcatgaatggcattagccaagtaggagacgttgcccgtcgttacgccggcc 362 |||||||| || ||||| ||||| |||||||| | || || || |||||||| || ||| Sbjct: 1366 ttggtaacctcgtgaatagcatttgccaagtaagcaacatttcctgtcgttacaccagcc 1307 Query: 363 atgcttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgact 422 |||||||| ||||||||||| |||||||| |||||| ||||| | ||||| ||||| ||| Sbjct: 1306 atgcttatcctcccgttgcgggtcatgtaaatatggaattcattggtcaaccggtcaact 1247 Query: 423 tgttcaggcgtcatcccactgtagcaaaacattccaatctgattggtgacatgctcccat 482 |||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 1246 tgttcaggtgtcatcccactgtagcagaacattccaatctgattagtgatgtgctcccat 1187 Query: 483 gataaaggtgaacctaacttttcaagattctcccgaagtgccttccgcattccaatgata 542 || |||| |||||||| |||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 1186 gacaaagatgaacctagcttttcaagattttccttaagtgccgtccgcattccaatgata 1127 Query: 543 cgatcagccatacccttgacctctcccaaccataagttcttcaattctggatcattaagg 602 |||||||||||||||||||||||| |||||||| |||| |||||||||||| | ||| Sbjct: 1126 cgatcagccatacccttgacctcttttaaccataaactctttaattctggatcactgagg 1067 Query: 603 ataatagaaacaaccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaatc 662 || ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1066 attatagaaacaacaagtgcaccatgaacaggtgggttgctgtacattggtcttgcaatc 1007 Query: 663 tgttgcaattggctcttaacagcaactgcttgcatct 699 ||||||| ||||||||| |||| |||||||||||||| Sbjct: 1006 tgttgcagttggctcttgacagaaactgcttgcatct 970
>gb|BT016777.1| Zea mays clone Contig610 mRNA sequence Length = 1715 Score = 412 bits (208), Expect = e-112 Identities = 316/352 (89%) Strand = Plus / Minus Query: 348 gtcgttacgccggccatgcttattctcccgttgcgtgtcatgtagatatggtattcactt 407 |||||||| || ||||||||||| ||||| ||||| |||||||| || ||||||||| || Sbjct: 1382 gtcgttacaccagccatgcttatcctcccattgcgggtcatgtaaatgtggtattcattt 1323 Query: 408 gtcaagcggtcgacttgttcaggcgtcatcccactgtagcaaaacattccaatctgattg 467 || || ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1322 gttaaacggtcaacttgttcaggtgtcatcccactgtagcagaacattccaatctgatta 1263 Query: 468 gtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaagtgccttc 527 |||| ||| |||||||| ||||||||||||| |||||||||||| ||| |||||||||| Sbjct: 1262 gtgatatgatcccatgacaaaggtgaacctagcttttcaagattttccttaagtgccttc 1203 Query: 528 cgcattccaatgatacgatcagccatacccttgacctctcccaaccataagttcttcaat 587 ||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||| Sbjct: 1202 cgcattccaatgatacgatcagccatacccttgacttcttttaaccacaaactcttcaat 1143 Query: 588 tctggatcattaaggataatagaaacaaccagcgcaccatgaacaggtgggttgctgtac 647 ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1142 tctggatcactgaggattatagaaacaaccagtgcaccatgaacaggtgggttgctgtac 1083 Query: 648 attggtctcgcaatctgttgcaattggctcttaacagcaactgcttgcatct 699 |||||||| || |||||||||| ||||||||| ||||||||||||||||||| Sbjct: 1082 attggtcttgcgatctgttgcagttggctcttgacagcaactgcttgcatct 1031
>gb|AY108926.1| Zea mays PCO126861 mRNA sequence Length = 1278 Score = 404 bits (204), Expect = e-109 Identities = 306/340 (90%) Strand = Plus / Minus Query: 360 gccatgcttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcg 419 ||||||||||| ||||| ||||| |||||||| || ||||||||| |||| || ||||| Sbjct: 841 gccatgcttatcctcccattgcgggtcatgtaaatgtggtattcatttgttaaacggtca 782 Query: 420 acttgttcaggcgtcatcccactgtagcaaaacattccaatctgattggtgacatgctcc 479 ||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||| ||| Sbjct: 781 acttgttcaggtgtcatcccactgtagcagaacattccaatctgattagtgatatgatcc 722 Query: 480 catgataaaggtgaacctaacttttcaagattctcccgaagtgccttccgcattccaatg 539 ||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||| Sbjct: 721 catgacaaaggtgaacctagcttttcaagattttccttaagtgccttccgcattccaatg 662 Query: 540 atacgatcagccatacccttgacctctcccaaccataagttcttcaattctggatcatta 599 ||||||||||||||||||||||| ||| ||||| || ||||||||||||||||| | Sbjct: 661 atacgatcagccatacccttgacttcttttaaccacaaactcttcaattctggatcactg 602 Query: 600 aggataatagaaacaaccagcgcaccatgaacaggtgggttgctgtacattggtctcgca 659 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 601 aggattatagaaacaaccagtgcaccatgaacaggtgggttgctgtacattggtcttgcg 542 Query: 660 atctgttgcaattggctcttaacagcaactgcttgcatct 699 |||||||||| ||||||||| ||||||||||||||||||| Sbjct: 541 atctgttgcagttggctcttgacagcaactgcttgcatct 502
>dbj|AK070560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062F07, full insert sequence Length = 1765 Score = 381 bits (192), Expect = e-102 Identities = 339/388 (87%) Strand = Plus / Minus Query: 312 tcatgaatggcattagccaagtaggagacgttgcccgtcgttacgccggccatgcttatt 371 |||||||| ||||||||||| || | || || || || ||||| || |||||||||||| Sbjct: 1431 tcatgaatagcattagccaaatacgccacatttcctgttgttacaccagccatgcttatt 1372 Query: 372 ctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggc 431 || || || || |||||||| |||||||||||| | || ||||| || || |||||||| Sbjct: 1371 ctgccattacgggtcatgtaaatatggtattcattggttaagcgatccacctgttcaggt 1312 Query: 432 gtcatcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggt 491 ||||||||||||||||| |||||||||||||||||||||| || |||||||| || ||| Sbjct: 1311 gtcatcccactgtagcagaacattccaatctgattggtgatgtgatcccatgacaatggt 1252 Query: 492 gaacctaacttttcaagattctcccgaagtgccttccgcattccaatgatacgatcagcc 551 ||||||| ||| ||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1251 gaacctaggccttcgagattttcccggagtgccttccgcattccaatgattcgatcagcc 1192 Query: 552 atacccttgacctctcccaaccataagttcttcaattctggatcattaaggataatagaa 611 ||||||||||||||| ||||||||| |||| |||||||||||||||||||| || || Sbjct: 1191 atacccttgacctctttcaaccataaactctttaattctggatcattaaggattatggag 1132 Query: 612 acaaccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaat 671 |||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1131 acaaccagtgcaccatgaacaggtgggttgctgtacattggccttgcaatctgttgcaat 1072 Query: 672 tggctcttaacagcaactgcttgcatct 699 ||||||||||||| |||||||||||||| Sbjct: 1071 tggctcttaacagaaactgcttgcatct 1044
>dbj|D67042.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate aminotransferase, partial cds Length = 715 Score = 359 bits (181), Expect = 8e-96 Identities = 331/381 (86%) Strand = Plus / Minus Query: 312 tcatgaatggcattagccaagtaggagacgttgcccgtcgttacgccggccatgcttatt 371 |||||||| ||||||||||| || | || || || || ||||| || |||||||||||| Sbjct: 381 tcatgaatagcattagccaaatacgccacatttcctgttgttacaccagccatgcttatt 322 Query: 372 ctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggc 431 || || || || |||||||| |||||||||||| | || ||||| | || |||||||| Sbjct: 321 ctgccattacgggtcatgtaaatatggtattcattggttaagcgaaccacctgttcaggt 262 Query: 432 gtcatcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggt 491 ||||||||||||||||| |||||||||||||||||||||| || |||||||| || ||| Sbjct: 261 gtcatcccactgtagcagaacattccaatctgattggtgatgtgatcccatgacaatggt 202 Query: 492 gaacctaacttttcaagattctcccgaagtgccttccgcattccaatgatacgatcagcc 551 ||||||| ||| ||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 201 gaacctaggccttcgagattttcccggagtgccttccgcattccaatgattcgatcagcc 142 Query: 552 atacccttgacctctcccaaccataagttcttcaattctggatcattaaggataatagaa 611 ||||||||||||||| ||||||||| |||| |||||||||||||||||||| || || Sbjct: 141 atacccttgacctctttcaaccataaactctttaattctggatcattaaggattatggag 82 Query: 612 acaaccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaat 671 |||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 81 acaaccagtgcaccatgaacaggtgggttgctgtacattggccttgcaatctgttgcaat 22 Query: 672 tggctcttaacagcaactgct 692 ||||||||||||| ||||||| Sbjct: 21 tggctcttaacagaaactgct 1
>gb|BT017215.1| Zea mays clone EL01N0372D01.c mRNA sequence Length = 1372 Score = 333 bits (168), Expect = 5e-88 Identities = 306/352 (86%) Strand = Plus / Minus Query: 348 gtcgttacgccggccatgcttattctcccgttgcgtgtcatgtagatatggtattcactt 407 |||||||| || |||||||||| ||||| ||||| |||||||| || || ||||| || Sbjct: 1059 gtcgttacaccaaccatgcttatcctcccattgcgggtcatgtaaatgggggattcattt 1000 Query: 408 gtcaagcggtcgacttgttcaggcgtcatcccactgtagcaaaacattccaatctgattg 467 || || ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 999 gttaaacggtcaacttgttcaggagtcatcccactgtagcagaacattccaatctgatta 940 Query: 468 gtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaagtgccttc 527 |||| ||| |||||||| ||||| ||||||| |||||||||||| ||| |||||||||| Sbjct: 939 gtgatatgatcccatgacaaaggagaacctagcttttcaagattttccttaagtgccttc 880 Query: 528 cgcattccaatgatacgatcagccatacccttgacctctcccaaccataagttcttcaat 587 ||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||| Sbjct: 879 cgcattccaatgatacgatcagccatacccttgacttcttttaaccacaaactcttcaat 820 Query: 588 tctggatcattaaggataatagaaacaaccagcgcaccatgaacaggtgggttgctgtac 647 ||||||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| | Sbjct: 819 tctggatcactgaggattatagaaacaaccagtgcaccatgatcaggtgggttgctgttc 760 Query: 648 attggtctcgcaatctgttgcaattggctcttaacagcaactgcttgcatct 699 |||||||| || |||||| ||| |||||||| ||||||||||| |||||| Sbjct: 759 attggtctggcgatctgtagcaggtggctcttgtcagcaactgctagcatct 708
>dbj|AK101008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148G14, full insert sequence Length = 1674 Score = 297 bits (150), Expect = 3e-77 Identities = 336/398 (84%) Strand = Plus / Minus Query: 302 cttggtaacatcatgaatggcattagccaagtaggagacgttgcccgtcgttacgccggc 361 ||||||||| |||||||| |||||||||| |||| || || || || ||||| || || Sbjct: 1390 cttggtaacctcatgaatagcattagccagataggcaacatttcctgttgttactccagc 1331 Query: 362 catgcttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgac 421 ||||||||| | |||||| || ||||||||||||||| | || |||||||||| ||||| Sbjct: 1330 catgcttatccgcccgttacgagtcatgtagatatggaactcttttgtcaagcgatcgac 1271 Query: 422 ttgttcaggcgtcatcccactgtagcaaaacattccaatctgattggtgacatgctccca 481 ||||||||| ||||| ||||||||||| ||||||||||||||||| |||| ||| ||||| Sbjct: 1270 ttgttcaggtgtcataccactgtagcagaacattccaatctgattagtgatatgttccca 1211 Query: 482 tgataaaggtgaacctaacttttcaagattctcccgaagtgccttccgcattccaatgat 541 ||| | |||||||| ||||||||||| ||||| ||||| | |||||||||||||| Sbjct: 1210 tgacattggtgaacccaacttttcaaggttctctttgagtgctgttcgcattccaatgat 1151 Query: 542 acgatcagccatacccttgacctctcccaaccataagttcttcaattctggatcattaag 601 ||||||||||||||||||||||||| || |||||| | ||||| || |||||| ||| Sbjct: 1150 acgatcagccatacccttgacctctttcagccataaacttttcaactccggatcaccaag 1091 Query: 602 gataatagaaacaaccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaat 661 ||| | ||||||| | ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 1090 aatagttgaaacaattaatgcaccatgaacgggtgggttgctgtacaaaggtctagcaat 1031 Query: 662 ctgttgcaattggctcttaacagcaactgcttgcatct 699 |||||| || |||||||||||||||||||||||||||| Sbjct: 1030 ctgttgtaactggctcttaacagcaactgcttgcatct 993
>dbj|D67043.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate aminotransferase, complete cds Length = 1578 Score = 297 bits (150), Expect = 3e-77 Identities = 336/398 (84%) Strand = Plus / Minus Query: 302 cttggtaacatcatgaatggcattagccaagtaggagacgttgcccgtcgttacgccggc 361 ||||||||| |||||||| |||||||||| |||| || || || || ||||| || || Sbjct: 1303 cttggtaacctcatgaatagcattagccagataggcaacatttcctgttgttactccagc 1244 Query: 362 catgcttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgac 421 ||||||||| | |||||| || ||||||||||||||| | || |||||||||| ||||| Sbjct: 1243 catgcttatccgcccgttacgagtcatgtagatatggaactcttttgtcaagcgatcgac 1184 Query: 422 ttgttcaggcgtcatcccactgtagcaaaacattccaatctgattggtgacatgctccca 481 ||||||||| ||||| ||||||||||| ||||||||||||||||| |||| ||| ||||| Sbjct: 1183 ttgttcaggtgtcataccactgtagcagaacattccaatctgattagtgatatgttccca 1124 Query: 482 tgataaaggtgaacctaacttttcaagattctcccgaagtgccttccgcattccaatgat 541 ||| | |||||||| ||||||||||| ||||| ||||| | |||||||||||||| Sbjct: 1123 tgacattggtgaacccaacttttcaaggttctctttgagtgctgttcgcattccaatgat 1064 Query: 542 acgatcagccatacccttgacctctcccaaccataagttcttcaattctggatcattaag 601 ||||||||||||||||||||||||| || |||||| | ||||| || |||||| ||| Sbjct: 1063 acgatcagccatacccttgacctctttcagccataaacttttcaactccggatcaccaag 1004 Query: 602 gataatagaaacaaccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaat 661 ||| | ||||||| | ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 1003 aatagttgaaacaattaatgcaccatgaacgggtgggttgctgtacaaaggtctagcaat 944 Query: 662 ctgttgcaattggctcttaacagcaactgcttgcatct 699 |||||| || |||||||||||||||||||||||||||| Sbjct: 943 ctgttgtaactggctcttaacagcaactgcttgcatct 906
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 190 bits (96), Expect = 4e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 556 ccttgacctctcccaaccataagttcttcaattctggatcattaaggataatagaaacaa 615 ||||||||||| ||||||||| |||| |||||||||||||||||||| || || |||| Sbjct: 7708595 ccttgacctctttcaaccataaactctttaattctggatcattaaggattatggagacaa 7708536 Query: 616 ccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggc 675 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 7708535 ccagtgcaccatgaacaggtgggttgctgtacattggccttgcaatctgttgcaattggc 7708476 Query: 676 tcttaacagcaactgcttgcatct 699 ||||||||| |||||||||||||| Sbjct: 7708475 tcttaacagaaactgcttgcatct 7708452 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 366 cttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgt 425 |||||||| || || || |||||||| |||||||||||| | || ||||| || || ||| Sbjct: 7709528 cttattctgccattacgggtcatgtaaatatggtattcattggttaagcgatccacctgt 7709469 Query: 426 tcaggcgtcatcccactgtagcaaaacattccaatctg 463 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 7709468 tcaggtgtcatcccactgtagcagaacattccaatctg 7709431 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 461 ctgattggtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaag 520 ||||||||||| || |||||||| || |||||||||| ||| ||||| ||||| || Sbjct: 7708778 ctgattggtgatgtgatcccatgacaatggtgaacctaggccttcgagattttcccggag 7708719 Query: 521 tgccttccgcattccaatgatacgatcagccataccct 558 ||||||||||||||||||||| |||||||||||||||| Sbjct: 7708718 tgccttccgcattccaatgattcgatcagccataccct 7708681
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 190 bits (96), Expect = 4e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 556 ccttgacctctcccaaccataagttcttcaattctggatcattaaggataatagaaacaa 615 ||||||||||| ||||||||| |||| |||||||||||||||||||| || || |||| Sbjct: 44860 ccttgacctctttcaaccataaactctttaattctggatcattaaggattatggagacaa 44801 Query: 616 ccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggc 675 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 44800 ccagtgcaccatgaacaggtgggttgctgtacattggccttgcaatctgttgcaattggc 44741 Query: 676 tcttaacagcaactgcttgcatct 699 ||||||||| |||||||||||||| Sbjct: 44740 tcttaacagaaactgcttgcatct 44717 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 366 cttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgt 425 |||||||| || || || |||||||| |||||||||||| | || ||||| || || ||| Sbjct: 45793 cttattctgccattacgggtcatgtaaatatggtattcattggttaagcgatccacctgt 45734 Query: 426 tcaggcgtcatcccactgtagcaaaacattccaatctg 463 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 45733 tcaggtgtcatcccactgtagcagaacattccaatctg 45696 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 461 ctgattggtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaag 520 ||||||||||| || |||||||| || |||||||||| ||| ||||| ||||| || Sbjct: 45043 ctgattggtgatgtgatcccatgacaatggtgaacctaggccttcgagattttcccggag 44984 Query: 521 tgccttccgcattccaatgatacgatcagccataccct 558 ||||||||||||||||||||| |||||||||||||||| Sbjct: 44983 tgccttccgcattccaatgattcgatcagccataccct 44946
>gb|AF017432.1|AF017432 Hordeum vulgare aspartate aminotransferase (aat) mRNA, 3' UTR, partial sequence Length = 106 Score = 180 bits (91), Expect = 4e-42 Identities = 105/107 (98%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 21 gaagtcctccagcatcttgttaaaatcaaggtataaccaagcattttccactg-gcgttt 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106 gaagtcctccagcatcttgttaaaatcaaggtataaccaagcattttccactgtgcgttt 47 Query: 80 cattcgaatgtgactagaatcacaataagataatctggcaaaaataa 126 ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 46 cattcgaatgtgactagaatcacaataagataa-ctggcaaaaataa 1
>dbj|D25323.1|PNIAATB Panicum miliaceum gene for mitochondrial aspartate aminotransferase, complete cds Length = 9014 Score = 167 bits (84), Expect = 6e-38 Identities = 129/144 (89%) Strand = Plus / Minus Query: 556 ccttgacctctcccaaccataagttcttcaattctggatcattaaggataatagaaacaa 615 ||||||||||| |||||||| |||| |||||||||||| | ||||| |||||||||| Sbjct: 5318 ccttgacctcttttaaccataaactctttaattctggatcactgaggattatagaaacaa 5259 Query: 616 ccagcgcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggc 675 | || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 5258 caagtgcaccatgaacaggtgggttgctgtacattggtcttgcaatctgttgcagttggc 5199 Query: 676 tcttaacagcaactgcttgcatct 699 |||| |||| |||||||||||||| Sbjct: 5198 tcttgacagaaactgcttgcatct 5175 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 366 cttattctcccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgt 425 ||||| ||||||||||| |||||||| |||||| ||||| | ||||| ||||| |||||| Sbjct: 6361 cttatcctcccgttgcgggtcatgtaaatatggaattcattggtcaaccggtcaacttgt 6302 Query: 426 tcaggcgtcatcccactgtagcaaaacattccaatctg 463 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 6301 tcaggtgtcatcccactgtagcagaacattccaatctg 6264 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 461 ctgattggtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaag 520 |||||| |||| ||||||||||| |||| |||||||| |||||||||||| ||| ||| Sbjct: 5535 ctgattagtgatgtgctcccatgacaaagatgaacctagcttttcaagattttccttaag 5476 Query: 521 tgccttccgcattccaatgatacgatcagccataccct 558 |||| ||||||||||||||||||||||||||||||||| Sbjct: 5475 tgccgtccgcattccaatgatacgatcagccataccct 5438
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 ||||||||||| |||||||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 20380406 gcaccatgaacgggtgggttgctgtacaaaggtctagcaatctgttgtaactggctctta 20380465 Query: 681 acagcaactgcttgcatct 699 ||||||||||||||||||| Sbjct: 20380466 acagcaactgcttgcatct 20380484 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 374 cccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgt 433 |||||| || ||||||||||||||| | || |||||||||| |||||||||||||| || Sbjct: 20379938 cccgttacgagtcatgtagatatggaactcttttgtcaagcgatcgacttgttcaggtgt 20379997 Query: 434 catcccactgtagcaaaacattccaatctg 463 ||| ||||||||||| |||||||||||||| Sbjct: 20379998 cataccactgtagcagaacattccaatctg 20380027 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 461 ctgattggtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaag 520 |||||| |||| ||| |||||||| | |||||||| ||||||||||| ||||| || Sbjct: 20380127 ctgattagtgatatgttcccatgacattggtgaacccaacttttcaaggttctctttgag 20380186 Query: 521 tgccttccgcattccaatgatacgatcagccataccct 558 ||| | ||||||||||||||||||||||||||||||| Sbjct: 20380187 tgctgttcgcattccaatgatacgatcagccataccct 20380224
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 ||||||||||| |||||||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 103801 gcaccatgaacgggtgggttgctgtacaaaggtctagcaatctgttgtaactggctctta 103860 Query: 681 acagcaactgcttgcatct 699 ||||||||||||||||||| Sbjct: 103861 acagcaactgcttgcatct 103879 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 374 cccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgt 433 |||||| || ||||||||||||||| | || |||||||||| |||||||||||||| || Sbjct: 103333 cccgttacgagtcatgtagatatggaactcttttgtcaagcgatcgacttgttcaggtgt 103392 Query: 434 catcccactgtagcaaaacattccaatctg 463 ||| ||||||||||| |||||||||||||| Sbjct: 103393 cataccactgtagcagaacattccaatctg 103422 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 461 ctgattggtgacatgctcccatgataaaggtgaacctaacttttcaagattctcccgaag 520 |||||| |||| ||| |||||||| | |||||||| ||||||||||| ||||| || Sbjct: 103522 ctgattagtgatatgttcccatgacattggtgaacccaacttttcaaggttctctttgag 103581 Query: 521 tgccttccgcattccaatgatacgatcagccataccct 558 ||| | ||||||||||||||||||||||||||||||| Sbjct: 103582 tgctgttcgcattccaatgatacgatcagccataccct 103619
>ref|NM_128651.3| Arabidopsis thaliana ASP1 (ASPARTATE AMINOTRANSFERASE 1) AT2G30970 (ASP1) mRNA, complete cds Length = 1677 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 1374 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 1315 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 1314 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 1255 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 1254 cctaacttctcaag 1241 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 1128 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 1069 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 1068 acagccacggcttgc 1054
>gb|AY128806.1| Arabidopsis thaliana aspartate aminotransferase AAT1 (At2g30970) mRNA, complete cds Length = 1399 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 1211 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 1152 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 1151 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 1092 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 1091 cctaacttctcaag 1078 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 965 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 906 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 905 acagccacggcttgc 891
>gb|AY059912.1| Arabidopsis thaliana aspartate aminotransferase (AAT1) (At2g30970; F7F1.18) mRNA, complete cds Length = 1487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 1262 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 1203 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 1202 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 1143 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 1142 cctaacttctcaag 1129 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 1016 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 957 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 956 acagccacggcttgc 942
>dbj|AK221257.1| Arabidopsis thaliana mRNA for aspartate aminotransferase, complete cds, clone: RAFL24-10-C13 Length = 851 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 564 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 505 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 504 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 445 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 444 cctaacttctcaag 431 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 318 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 259 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 258 acagccacggcttgc 244
>emb|BX820069.1|CNS0A8FI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 441 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 144 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 85 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 84 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 25 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 24 cctaacttctcaag 11
>emb|BX820010.1|CNS0A80C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZG08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1643 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 1349 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 1290 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 1289 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 1230 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 1229 cctaacttctcaag 1216 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 1103 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 1044 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 1043 acagccacggcttgc 1029
>gb|AY089111.1| Arabidopsis thaliana clone 34360 mRNA, complete sequence Length = 1533 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 1263 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 1204 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 1203 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 1144 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 1143 cctaacttctcaag 1130 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 1017 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 958 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 957 acagccacggcttgc 943
>gb|U15026.1|ATU15026 Arabidopsis thaliana aspartate aminotransferase (Asp1) mRNA, complete cds Length = 1612 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 1309 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 1250 Query: 435 atcccactgtagcaaaacattccaatctgattggtgacatgctcccatgataaaggtgaa 494 | |||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct: 1249 aacccactgtagcagaacattccaatctgtttggtaacgtgctcccatgacaaaggcgat 1190 Query: 495 cctaacttttcaag 508 |||||||| ||||| Sbjct: 1189 cctaacttctcaag 1176 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 1063 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 1004 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 1003 acagccacggcttgc 989
>emb|Y09300.1|ATASKDZ A.thaliana ASK dzeta gene Length = 5641 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 5305 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 5364 Query: 435 atcccactgtagcaaaacattccaatctg 463 | |||||||||||| |||||||||||||| Sbjct: 5365 aacccactgtagcagaacattccaatctg 5393 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 465 ttggtgacatgctcccatgataaaggtgaacctaacttttcaag 508 ||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct: 5486 ttggtaacgtgctcccatgacaaaggcgatcctaacttctcaag 5529
>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete sequence Length = 89779 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 375 ccgttgcgtgtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtc 434 ||||| || ||||| ||||| || ||||| ||||| |||||||| || ||||| || || Sbjct: 55933 ccgttacgggtcatatagatgtgatattcgcttgttaagcggtcaacctgttctggtgtt 55874 Query: 435 atcccactgtagcaaaacattccaatctg 463 | |||||||||||| |||||||||||||| Sbjct: 55873 aacccactgtagcagaacattccaatctg 55845 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 621 gcaccatgaacaggtgggttgctgtacattggtctcgcaatctgttgcaattggctctta 680 |||||||| | |||||||||||||||||||||||| || | ||| |||||||| || || Sbjct: 55471 gcaccatgcaaaggtgggttgctgtacattggtctagctagctgctgcaattgacttttc 55412 Query: 681 acagcaactgcttgc 695 ||||| || |||||| Sbjct: 55411 acagccacggcttgc 55397 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 465 ttggtgacatgctcccatgataaaggtgaacctaacttttcaag 508 ||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct: 55752 ttggtaacgtgctcccatgacaaaggcgatcctaacttctcaag 55709
>gb|AC137667.18| Medicago truncatula clone mth2-30h5, complete sequence Length = 111249 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 406 ttgtcaagcggtcgacttgttcaggcgtcatcccactgtagcaaaacattccaatctg 463 ||||||| || || |||||||| || |||||||| |||||||| |||||||||||||| Sbjct: 11065 ttgtcaaacgatcaacttgttctggtgtcatcccgctgtagcagaacattccaatctg 11122 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 384 gtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtcatcccactg 443 |||||||| ||||| | || |||||||| || || || ||||| || |||||||||||| Sbjct: 18092 gtcatgtaaatatgaaactcgcttgtcaaacgatcaacctgttctggtgtcatcccactg 18151 Query: 444 tagcaaaacattccaatctg 463 ||||| ||||| |||||||| Sbjct: 18152 tagcagaacatgccaatctg 18171
>gb|AC135160.22| Medicago truncatula clone mth2-20m5, complete sequence Length = 120202 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 406 ttgtcaagcggtcgacttgttcaggcgtcatcccactgtagcaaaacattccaatctg 463 ||||||| || || |||||||| || |||||||| |||||||| |||||||||||||| Sbjct: 112976 ttgtcaaacgatcaacttgttctggtgtcatcccgctgtagcagaacattccaatctg 112919 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 384 gtcatgtagatatggtattcacttgtcaagcggtcgacttgttcaggcgtcatcccactg 443 |||||||| ||||| | || |||||||| || || || ||||| || |||||||||||| Sbjct: 105949 gtcatgtaaatatgaaactcgcttgtcaaacgatcaacctgttctggtgtcatcccactg 105890 Query: 444 tagcaaaacattccaatctg 463 ||||| ||||| |||||||| Sbjct: 105889 tagcagaacatgccaatctg 105870
>gb|L40579.1|SOYMAA Glycine max (clone pSAT2) nuclear-encoded mitochondrial aspartate aminotransferase mRNA, complete cds Length = 1717 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 423 tgttcaggcgtcatcccactgtagcaaaacattccaatctgattggtgacatgctcccat 482 |||||||| |||| ||||||||||| ||||| ||||||||||| || | ||||| |||| Sbjct: 1207 tgttcaggtgtcaatccactgtagcagaacataccaatctgattagttatatgctgccat 1148 Query: 483 g 483 | Sbjct: 1147 g 1147
>dbj|AB224025.1| Aspergillus oryzae cDNA, contig sequence: AoEST0866 Length = 694 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Minus Query: 535 caatgatacgatcagccatacccttgacctctcccaacca 574 ||||||| || || ||||| |||||||||||||||||||| Sbjct: 308 caatgatgcggtcggccatgcccttgacctctcccaacca 269
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Minus Query: 535 caatgatacgatcagccatacccttgacctctcccaacca 574 ||||||| || || ||||| |||||||||||||||||||| Sbjct: 3185654 caatgatgcggtcggccatgcccttgacctctcccaacca 3185615
>gb|AC125620.5| Rattus norvegicus 4 BAC CH230-9J2 (Children's Hospital Oakland Research Institute) complete sequence Length = 122542 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttgaagtcctccagcatcttg 39 ||||||||||||||||||||| Sbjct: 4322 ttgaagtcctccagcatcttg 4342
>emb|Z83313.1|HS106C24 Human DNA sequence from clone RP1-106C24 on chromosome X Contains a tropomyosin 2 (beta) (TPM2) pseudogene, complete sequence Length = 93959 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 taaaatcaaggtataaccaag 61 ||||||||||||||||||||| Sbjct: 55394 taaaatcaaggtataaccaag 55374
>emb|AL732578.5| Human DNA sequence from clone RP11-421K1 on chromosome X Contains the 5' end of the GPR64 gene for G protein-coupled receptor 64 and a CpG island, complete sequence Length = 191318 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 acttatttctctagcatgaca 226 ||||||||||||||||||||| Sbjct: 170890 acttatttctctagcatgaca 170910
>emb|AL662787.6| Human DNA sequence from clone RP11-162J2 on chromosome 9 Contains the 3' end of the gene for protein kinase anchoring protein GKAP42 (FKSG21), complete sequence Length = 63605 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 agatggtcctcgatttcactt 304 ||||||||||||||||||||| Sbjct: 42164 agatggtcctcgatttcactt 42144
>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland Research Institute) complete sequence Length = 214386 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 agtttgaagtcctccagcatc 36 ||||||||||||||||||||| Sbjct: 123417 agtttgaagtcctccagcatc 123437
>gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's Hospital Oakland Research Institute) complete sequence Length = 177865 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttgaagtcctccagcatcttg 39 ||||||||||||||||||||| Sbjct: 143970 ttgaagtcctccagcatcttg 143990
>gb|AE008916.1| Salmonella typhimurium LT2, section 220 of 220 of the complete genome Length = 13852 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 gtcatgtagatatggtattca 404 ||||||||||||||||||||| Sbjct: 1634 gtcatgtagatatggtattca 1614
>gb|AY941688.1| Solanum habrochaites putative copper/zinc superoxide dismutase (CT148) gene, CT148-7219a allele, partial cds Length = 1438 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 665 ttgcaattggctcttaacagc 685 ||||||||||||||||||||| Sbjct: 21 ttgcaattggctcttaacagc 1
>gb|AY941686.1| Solanum habrochaites putative copper/zinc superoxide dismutase (CT148) gene, CT148-7216a allele, partial cds Length = 1437 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 665 ttgcaattggctcttaacagc 685 ||||||||||||||||||||| Sbjct: 21 ttgcaattggctcttaacagc 1
>emb|AL116254.1|CNS01D1I Botrytis cinerea strain T4 cDNA library Length = 420 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 537 atgatacgatcagccatacccttgacctc 565 ||||||||||||||||| ||||| ||||| Sbjct: 77 atgatacgatcagccattcccttaacctc 49
>emb|AL112680.1|CNS01AA8 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 537 atgatacgatcagccatacccttgacctc 565 ||||||||||||||||| ||||| ||||| Sbjct: 538 atgatacgatcagccattcccttaacctc 510
>emb|AL111802.1|CNS019LU Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 537 atgatacgatcagccatacccttgacctc 565 ||||||||||||||||| ||||| ||||| Sbjct: 473 atgatacgatcagccattcccttaacctc 445
>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence Length = 161391 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaccaagcattttccactggc 75 ||||||||||||||||||||| Sbjct: 105368 aaccaagcattttccactggc 105348
>ref|XM_608304.2| PREDICTED: Bos taurus similar to NACHT, leucine rich repeat and PYD containing 13 (LOC529844), mRNA Length = 3382 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cgagtttgaagtcctccagc 33 |||||||||||||||||||| Sbjct: 103 cgagtttgaagtcctccagc 84
>gb|AC114207.5| Rattus norvegicus 13 BAC CH230-195H16 (Children's Hospital Oakland Research Institute) complete sequence Length = 216896 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tttgaagtcctccagcatcttgtt 41 ||||||||||||||||||| |||| Sbjct: 100011 tttgaagtcctccagcatcatgtt 99988
>ref|XM_654943.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2431.2), mRNA Length = 1422 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tgaagatggtcctcgatttc 300 |||||||||||||||||||| Sbjct: 1199 tgaagatggtcctcgatttc 1180
>ref|XM_746692.1| Aspergillus fumigatus Af293 aspartate aminotransferase (Afu4g10410) partial mRNA Length = 1314 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 535 caatgatacgatcagccatacccttgacctctccca 570 |||||||||| || ||||| ||||||||||| |||| Sbjct: 1078 caatgatacggtcggccatgcccttgacctcgccca 1043
>emb|CR937050.2| Rattus norvegicus chromosome 5 BAC CH230-339J16, complete sequence Length = 163260 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 ttgaagtcctccagcatcttgttaaaat 46 |||||||||||||||||| || |||||| Sbjct: 156573 ttgaagtcctccagcatcatgataaaat 156600
>gb|AC121598.3| Mus musculus BAC clone RP23-300F10 from chromosome 15, complete sequence Length = 189823 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 aacaggtttacttcctagaa 206 |||||||||||||||||||| Sbjct: 9353 aacaggtttacttcctagaa 9372
>gb|AC009902.13| Homo sapiens chromosome 8, clone RP11-363E6, complete sequence Length = 217249 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 caaaacattccaatctgatt 466 |||||||||||||||||||| Sbjct: 214905 caaaacattccaatctgatt 214886
>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence Length = 199240 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aacatcatgaatggcattag 327 |||||||||||||||||||| Sbjct: 87797 aacatcatgaatggcattag 87816
>emb|AL512591.6| Human DNA sequence from clone RP11-176L21 on chromosome 9, complete sequence Length = 102510 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ctccagcatcttgttaaaat 46 |||||||||||||||||||| Sbjct: 33314 ctccagcatcttgttaaaat 33295
>emb|AL359203.22| Human DNA sequence from clone RP11-547P4 on chromosome 1 Contains a pseudogene similar to part of tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta polypeptide (YWHAQ), complete sequence Length = 121362 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 aagggaaaacccctttcgct 272 |||||||||||||||||||| Sbjct: 117199 aagggaaaacccctttcgct 117218
>emb|AL353574.8| Human DNA sequence from clone RP11-551M18 on chromosome 13 Contains the 5' end of the SLC15A1 gene for solute carrier family 15 (oligopeptide transporter) member 1 and a CpG island, complete sequence Length = 89515 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 aagggaaaacccctttcgct 272 |||||||||||||||||||| Sbjct: 19026 aagggaaaacccctttcgct 19045
>emb|AL078591.18|HSDJ198I9 Human DNA sequence from clone RP1-198I9 on chromosome 6q12-13 Contains the 3' end of a novel gene (KIAA1411, FLJ20176, FLJ11049), complete sequence Length = 144649 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aagataatctggcaaaaata 125 |||||||||||||||||||| Sbjct: 25849 aagataatctggcaaaaata 25830
>gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 map 13, complete sequence Length = 232472 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aacatcatgaatggcattag 327 |||||||||||||||||||| Sbjct: 10056 aacatcatgaatggcattag 10075
>dbj|AB237754.1| Uncultured archaeon gene for 16S rRNA, partial sequence, clone: HDBW-WA21 Length = 1401 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 atacccttgacctctcccaa 571 |||||||||||||||||||| Sbjct: 601 atacccttgacctctcccaa 582
>gb|AC079209.6| Homo sapiens chromosome 8, clone RP11-1149M10, complete sequence Length = 165211 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 caaaacattccaatctgatt 466 |||||||||||||||||||| Sbjct: 118940 caaaacattccaatctgatt 118959
>gb|DQ066796.1| Strongylocentrotus purpuratus clone D23 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066795.1| Strongylocentrotus purpuratus clone D22 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066794.1| Strongylocentrotus purpuratus clone D21 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066793.1| Strongylocentrotus purpuratus clone D20 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066790.1| Strongylocentrotus purpuratus clone D17 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066785.1| Strongylocentrotus purpuratus clone D12 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066784.1| Strongylocentrotus purpuratus clone D11 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066783.1| Strongylocentrotus purpuratus clone D10 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066782.1| Strongylocentrotus purpuratus clone D9 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066778.1| Strongylocentrotus purpuratus clone D5 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|DQ066774.1| Strongylocentrotus purpuratus clone D1 extracellular protein (endo16) gene, exon 6 and partial cds Length = 935 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gattctcccgaagtgccttc 527 |||||||||||||||||||| Sbjct: 177 gattctcccgaagtgccttc 158
>gb|AF236876.5| Homo sapiens chromosome 8 clone CTD-3048P3 map p23, complete sequence Length = 114134 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 aaaggtgaacctaacttttc 505 |||||||||||||||||||| Sbjct: 1967 aaaggtgaacctaacttttc 1986
>gb|AC019257.3| Homo sapiens chromosome 8, clone RP11-439C15, complete sequence Length = 220201 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 aaaggtgaacctaacttttc 505 |||||||||||||||||||| Sbjct: 195140 aaaggtgaacctaacttttc 195121
>ref|XM_575563.1| PREDICTED: Rattus norvegicus similar to LRRGT00176 (LOC500211), mRNA Length = 1493 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 ttgaagtcctccagcatcttgttaaaat 46 |||||||||||||||||| |||| |||| Sbjct: 583 ttgaagtcctccagcatcatgttcaaat 556
>gb|AY142797.1| Heliobacillus mobilis SPO0B-associated GTP-binding protein gene, partial cds Length = 1329 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gtttgatttcgtcgagtttg 21 |||||||||||||||||||| Sbjct: 1266 gtttgatttcgtcgagtttg 1285
>gb|AC144772.2| Mus musculus BAC clone RP24-173G12 from chromosome 15, complete sequence Length = 160630 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 aacaggtttacttcctagaa 206 |||||||||||||||||||| Sbjct: 152899 aacaggtttacttcctagaa 152918
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 ttgaagtcctccagcatcttgttaaaat 46 |||||||||||||||||| |||| |||| Sbjct: 120651 ttgaagtcctccagcatcatgttcaaat 120678
>dbj|AK112313.1| Ciona intestinalis cDNA, clone:ciad018a01, full insert sequence Length = 1597 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 tgtagcaaaacattccaatctgat 465 ||||||||||||| |||||||||| Sbjct: 1192 tgtagcaaaacatcccaatctgat 1169 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,419,630 Number of Sequences: 3902068 Number of extensions: 5419630 Number of successful extensions: 94445 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94202 Number of HSP's gapped (non-prelim): 230 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)