>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  186 bits (94), Expect = 1e-44
 Identities = 152/173 (87%), Gaps = 2/173 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   actcttattggaacgatggaaaaa-cagaaatacatnactaagatgatacattggcttcg 59
           |||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||
Sbjct: 525 actcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcg 466

                                                                       
Query: 60  ntgtagctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccataga 119
            ||| | ||  ||| ||||||| || ||  |||||| ||| || ||||||||||||||||
Sbjct: 465 atgtgg-tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 407

                                                                
Query: 120 aatcatgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           |||||||||||||||||||||||||||||  || ||||||||||||| |||||
Sbjct: 406 aatcatgcccaagaaggcatgattaggcttcaagagactgaatgacttcacca 354

>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  184 bits (93), Expect = 6e-44
 Identities = 151/172 (87%), Gaps = 2/172 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctcttattggaacgatggaaaaa-cagaaatacatnactaagatgatacattggcttcgn 60
           ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||| 
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 61  tgtagctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccatagaa 120
           | | | ||  ||| ||||||| || ||  |||||| ||| || |||||||||||||||||
Sbjct: 537 tctgg-tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479

                                                               
Query: 121 atcatgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           ||||||||||||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcacca 427

>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  184 bits (93), Expect = 6e-44
 Identities = 151/172 (87%), Gaps = 2/172 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctcttattggaacgatggaaaaa-cagaaatacatnactaagatgatacattggcttcgn 60
           ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||| 
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 61  tgtagctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccatagaa 120
           | | | ||  ||| ||||||| || ||  |||||| ||| || |||||||||||||||||
Sbjct: 537 tctgg-tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479

                                                               
Query: 121 atcatgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           ||||||||||||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcacca 427

>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  178 bits (90), Expect = 4e-42
 Identities = 151/173 (87%), Gaps = 2/173 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   actcttattggaacgatggaaaaa-cagaaatacatnactaagatgatacattggcttcg 59
           |||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||
Sbjct: 439 actcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcg 380

                                                                       
Query: 60  ntgtagctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccataga 119
            | | | ||  ||| ||||||| || ||  |||||| ||  || ||||||||||||||||
Sbjct: 379 atctgg-tgatggtatcaagattgttgaacagaaaatgaaaaaacgaccttggccataga 321

                                                                
Query: 120 aatcatgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           |||||||||||||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 320 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcacca 268

>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  155 bits (78), Expect = 5e-35
 Identities = 143/169 (84%)
 Strand = Plus / Minus

                                                                       
Query: 4   cttattggaacgatggaaaaacagaaatacatnactaagatgatacattggcttcgntgt 63
           ||||||||||| | |||||||||||||| ||| | ||||||||||||||  ||||| |  
Sbjct: 577 cttattggaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcgatac 518

                                                                       
Query: 64  agctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccatagaaatc 123
           |||||  ||| |||||||  |  | || |||| ||| |  ||||||||||||||||||||
Sbjct: 517 agctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatc 458

                                                            
Query: 124 atgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           |||| ||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 457 atgcacaagaaggcatgattaggcttcaacagactgaatgactgcacca 409

>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  153 bits (77), Expect = 2e-34
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1   actcttattggaacgatggaaaaacagaaatacatnactaagatgatacattggcttcgn 60
           |||||||||||||| | ||||||| | |||||||| | ||||||||||||||||||||  
Sbjct: 573 actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 514

                                                                       
Query: 61  tgtagctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccatagaa 120
           |  |||||  ||| |||||||  |  | || |||| ||| |  ||||| |||||||||||
Sbjct: 513 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaa 454

                                                               
Query: 121 atcatgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           ||||||| ||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 453 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcacca 402

>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  153 bits (77), Expect = 2e-34
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcttattggaacgatggaaaaacagaaatacatnactaagatgatacattggcttcgn 60
            |||||| ||||||| | ||||||| | |||||||| | ||||||||||||||||||||  
Sbjct: 2273 actcttgttggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 2214

                                                                        
Query: 61   tgtagctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccatagaa 120
            |  |||||  ||| |||||||  |  | || |||| ||| |  |||||||||||||||||
Sbjct: 2213 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 2154

                                                                
Query: 121  atcatgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
            ||||||| ||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 2153 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcacca 2102

>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  147 bits (74), Expect = 1e-32
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                       
Query: 4   cttattggaacgatggaaaaacagaaatacatnactaagatgatacattggcttcgntgt 63
           ||||||||||| | |||||||||||||| ||| | ||||||||||||||  ||||| |  
Sbjct: 397 cttattggaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcgatac 338

                                                                       
Query: 64  agctgnnggtntcaagatngtngangagaaaangacnaancgaccttggccatagaaatc 123
           |||||  ||| |||||||  |  | || |||| ||| |  ||||||||||||||||||||
Sbjct: 337 agctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatc 278

                                                            
Query: 124 atgcccaagaaggcatgattaggctnnaacagactgaatgactgcacca 172
           |||| |||||||||||||||||| |  ||||||||||||||||||||||
Sbjct: 277 atgcacaagaaggcatgattaggattcaacagactgaatgactgcacca 229

>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  133 bits (67), Expect = 2e-28
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                        
Query: 71   ggtntcaagatngtngangagaaaangacnaancgaccttggccatagaaatcatgccca 130
            ||| ||||||| || ||  |||||| ||| || |||||||||||||||||||||||||||
Sbjct: 2226 ggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccca 2167

                                                      
Query: 131  agaaggcatgattaggctnnaacagactgaatgactgcacca 172
            ||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 2166 agaaggcatgattaggcttcaacagactgaatgacttcacca 2125

>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  133 bits (67), Expect = 2e-28
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                       
Query: 71  ggtntcaagatngtngangagaaaangacnaancgaccttggccatagaaatcatgccca 130
           ||| ||||||| || ||  |||||| ||| || |||||||||||||||||||||||||||
Sbjct: 528 ggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccca 469

                                                     
Query: 131 agaaggcatgattaggctnnaacagactgaatgactgcacca 172
           ||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 468 agaaggcatgattaggcttcaacagactgaatgacttcacca 427

>emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in linkage group 3,
             complete sequence
          Length = 102377

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     tggaacgatggaaaaacagaaa 30
             ||||||||||||||||||||||
Sbjct: 59947 tggaacgatggaaaaacagaaa 59968

>emb|AL121887.24|HS1040G13 Human DNA sequence from clone RP5-1040G13 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 113473

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atggaaaaacagaaatacat 35
             ||||||||||||||||||||
Sbjct: 86345 atggaaaaacagaaatacat 86364

>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17,
             complete sequence
          Length = 120315

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   aacagactgaatgactgcac 170
             ||||||||||||||||||||
Sbjct: 61583 aacagactgaatgactgcac 61602

>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein
            (vis1) gene, complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    actcttattggaacgatggaaaaa 24
            |||||||||||||||| |||||||
Sbjct: 1736 actcttattggaacgaaggaaaaa 1713

>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein
            (vis1) gene, complete cds
          Length = 2224

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    actcttattggaacgatggaaaaa 24
            |||||||||||||||| |||||||
Sbjct: 1703 actcttattggaacgaaggaaaaa 1680

>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete
           cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 107 ccttggccatagaaatcatgccca 130
           |||||||||| |||||||||||||
Sbjct: 862 ccttggccattgaaatcatgccca 839

>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 105 gaccttggccatagaaatcatgcccaagaaggcatgatta 144
           ||||| ||||| ||||||||||| |||||  |||||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgatta 457

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      aacgatggaaaaacagaaa 30
               |||||||||||||||||||
Sbjct: 2879167 aacgatggaaaaacagaaa 2879149

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      aacgatggaaaaacagaaa 30
               |||||||||||||||||||
Sbjct: 2879378 aacgatggaaaaacagaaa 2879360

>gb|AC186368.1| Pan troglodytes chromosome 7 clone CH251-329G12, complete sequence
          Length = 146205

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    atggaaaaacagaaataca 34
             |||||||||||||||||||
Sbjct: 87563 atggaaaaacagaaataca 87545

>gb|AC124746.3| Mus musculus BAC clone RP23-242B22 from 15, complete sequence
          Length = 183209

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 8      ttggaacgatggaaaaacagaaa 30
              |||||||||||||| ||||||||
Sbjct: 160419 ttggaacgatggaagaacagaaa 160441

>gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, complete sequence
          Length = 200339

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 8     ttggaacgatggaaaaacagaaa 30
             |||||||||||||| ||||||||
Sbjct: 16929 ttggaacgatggaagaacagaaa 16951

>emb|AL359273.11| Human DNA sequence from clone RP11-376N17 on chromosome 1 Contains the
              gene for dnaj-like protein (LOC148418), the urate oxidase
              (UOX) pseudogene, a novel pseudogene and the gene for DNase
              II-like acid DNase (DLAD), complete sequence
          Length = 205034

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     atggaaaaacagaaataca 34
              |||||||||||||||||||
Sbjct: 115536 atggaaaaacagaaataca 115518

>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence
          Length = 201842

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    acagactgaatgactgcac 170
              |||||||||||||||||||
Sbjct: 188410 acagactgaatgactgcac 188428

>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 17     tggaaaaacagaaatacat 35
              |||||||||||||||||||
Sbjct: 117648 tggaaaaacagaaatacat 117630

>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tggaaaaacagaaatacat 35
             |||||||||||||||||||
Sbjct: 40261 tggaaaaacagaaatacat 40243

>dbj|AB074105.1| Pongo pygmaeus Uox gene for urate oxidase, intron 4, partial
           sequence
          Length = 1404

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  atggaaaaacagaaataca 34
           |||||||||||||||||||
Sbjct: 172 atggaaaaacagaaataca 190

>dbj|AB074104.1| Gorilla gorilla Uox gene for urate oxidase, intron 4, partial
           sequence
          Length = 1403

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  atggaaaaacagaaataca 34
           |||||||||||||||||||
Sbjct: 172 atggaaaaacagaaataca 190

>dbj|AB074103.1| Pan troglodytes Uox gene for urate oxidase, intron 4, partial
           sequence
          Length = 1397

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  atggaaaaacagaaataca 34
           |||||||||||||||||||
Sbjct: 172 atggaaaaacagaaataca 190

>dbj|AB074102.1| Homo sapiens Uox gene for urate oxidase, intron 4, partial sequence
          Length = 1393

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  atggaaaaacagaaataca 34
           |||||||||||||||||||
Sbjct: 172 atggaaaaacagaaataca 190


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,022,623
Number of Sequences: 3902068
Number of extensions: 1022623
Number of successful extensions: 70626
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70555
Number of HSP's gapped (non-prelim): 59
length of query: 172
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 150
effective length of database: 17,147,199,772
effective search space: 2572079965800
effective search space used: 2572079965800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)