| Clone Name | rbags18e16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK112031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A09, full insert sequence Length = 1045 Score = 472 bits (238), Expect = e-130 Identities = 358/398 (89%) Strand = Plus / Minus Query: 262 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 321 |||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| ||||| | Sbjct: 756 tcatgttctagcagcagcctgatgatctttgggcccggttgccacccaccacatccacgg 697 Query: 322 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 381 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 696 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 637 Query: 382 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 441 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 636 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 577 Query: 442 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 501 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 576 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccaccgt 517 Query: 502 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 561 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 516 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 457 Query: 562 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 621 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 456 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 397 Query: 622 catcgtaaactagaacacaacaatccgctccacggtag 659 |||| |||||||||||||| ||||| |||||||||||| Sbjct: 396 catcataaactagaacacagcaatctgctccacggtag 359 Score = 48.1 bits (24), Expect = 0.037 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 37 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 91 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 988 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 933
>dbj|AK111896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021E23, full insert sequence Length = 1046 Score = 472 bits (238), Expect = e-130 Identities = 358/398 (89%) Strand = Plus / Minus Query: 262 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 321 |||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| ||||| | Sbjct: 757 tcatgttctagcagcagcctgatgatctttgggcccggttgccacccaccacatccacgg 698 Query: 322 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 381 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 697 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 638 Query: 382 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 441 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 637 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 578 Query: 442 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 501 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 577 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccaccgt 518 Query: 502 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 561 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 517 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 458 Query: 562 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 621 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 457 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 398 Query: 622 catcgtaaactagaacacaacaatccgctccacggtag 659 |||| |||||||||||||| ||||| |||||||||||| Sbjct: 397 catcataaactagaacacagcaatctgctccacggtag 360 Score = 48.1 bits (24), Expect = 0.037 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 37 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 91 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 989 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 934
>ref|XM_475712.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 458 bits (231), Expect = e-125 Identities = 348/387 (89%) Strand = Plus / Minus Query: 273 cagcatcctgacgatccttgaccccggttgccgcccaccacgtccacagtgtccggcata 332 ||||| ||||| |||| ||| |||||||||| |||||||| ||||| |||||||||| | Sbjct: 617 cagcagcctgatgatctttgggcccggttgccacccaccacatccacggtgtccggcaca 558 Query: 333 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 392 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 557 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 498 Query: 393 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 452 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 497 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 438 Query: 453 caccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaact 512 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||| Sbjct: 437 caccatgcctttgccttcttctcagagaccacacggctgttgccaccgtctacatcaact 378 Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattaga 572 ||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 377 ttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttgcctgaattaga 318 Query: 573 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 632 || ||||||||||||||||| |||||||||||||| ||||| || || ||||| |||||| Sbjct: 317 aattcttcacgccagttgttaagattatcaaatgacttcatagaattgacatcataaact 258 Query: 633 agaacacaacaatccgctccacggtag 659 |||||||| ||||| |||||||||||| Sbjct: 257 agaacacagcaatctgctccacggtag 231
>gb|AY226827.1| Oryza sativa (indica cultivar-group) small GTP binding protein (Rab7) mRNA, complete cds Length = 1018 Score = 456 bits (230), Expect = e-125 Identities = 356/398 (89%) Strand = Plus / Minus Query: 262 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 321 |||||||||| ||||| ||||| |||| | | |||||||||| |||||||| ||||| | Sbjct: 693 tcatgttctagcagcagcctgatgatcttggggcccggttgccacccaccacatccacgg 634 Query: 322 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 381 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 633 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 574 Query: 382 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 441 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 573 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 514 Query: 442 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 501 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||| | Sbjct: 513 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccactgt 454 Query: 502 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 561 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 453 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 394 Query: 562 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 621 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 393 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 334 Query: 622 catcgtaaactagaacacaacaatccgctccacggtag 659 |||| |||||||||||||| ||||| |||||||||||| Sbjct: 333 catcataaactagaacacagcaatctgctccacggtag 296 Score = 48.1 bits (24), Expect = 0.037 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 37 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 91 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 925 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 870
>gb|AY109438.1| Zea mays CL8348_1 mRNA sequence Length = 1232 Score = 426 bits (215), Expect = e-116 Identities = 327/365 (89%) Strand = Plus / Plus Query: 295 cccggttgccgcccaccacgtccacagtgtccggcatatacaattcttcctctggctcat 354 |||||||||| |||||||||||||| || || |||| ||||| ||||||||||||||||| Sbjct: 559 cccggttgccacccaccacgtccacggtatctggcacatacagttcttcctctggctcat 618 Query: 355 tcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatccttgg 414 |||||||||| ||||| || ||||||||||| || || |||||||| |||| ||||| | Sbjct: 619 tcttcagagcattcttcacgatacactggaaggcgtcttccacgttcgttccgtccttag 678 Query: 415 cagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttct 474 |||| ||||||||||| |||||||||||||| || |||||||||||||| |||||| || Sbjct: 679 cagacgtctcaaagtacgggatgttccctttggaagcacaccatgcctttgcctttnnct 738 Query: 475 cagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaag 534 |||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 739 cagacaccacacggctgttcccaccatctacatcaactttgttacccaacagaacaaaag 798 Query: 535 ggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttca 594 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 799 ggaaattatcaggatctgatgggctagcctgaattagaaactcttctcgccagttgttca 858 Query: 595 gattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgctccac 654 | || |||||||||||||| || |||||||| || ||||| ||||||||||| ||||| | Sbjct: 859 ggttgtcaaatgatttcatagaattaacatcatagactaggacacaacaatctgctcccc 918 Query: 655 ggtag 659 ||||| Sbjct: 919 ggtag 923 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 tgtattcacaagatatgacgctactgatga 93 |||||||||||| ||||||||||||||||| Sbjct: 325 tgtattcacaaggtatgacgctactgatga 354
>gb|BT024015.1| Zea mays clone EL01N0311D12 mRNA sequence Length = 1605 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%) Strand = Plus / Minus Query: 260 cctcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccac 319 |||||||| |||||||| || || |||| ||| |||||||||| || ||||| ||||| Sbjct: 1329 cctcatgtcttaacagcagccagatgatctctgagcccggttgccacctaccacatccac 1270 Query: 320 agtgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactataca 379 || || |||| ||||||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 1269 ggtatctggcacatacaattcttcctccggttcattcttcagagcattctttacaataca 1210 Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| || || |||||||| |||||||||| ||||| ||||||||||| |||||||| Sbjct: 1209 ctggaaggcatcttccacgttcgttccatccttagcagacgtctcaaagtacgggatgtt 1150 Query: 440 ccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacc 499 |||||||||||| ||||||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 1149 ccctttagaggcgcaccatgcctttgcctttttctccgacaccacacggctgttcccacc 1090 Query: 500 atctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggct 559 ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| Sbjct: 1089 atctacatcaactttgttacccaacagaacaaaagggaaattgtcaggatctgatgggct 1030 Query: 560 agcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtt 619 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 1029 cgcctgaattagaaactcttcacgccagttgtgaagattatcaaacgatttcatagaatt 970 Query: 620 aacatcgtaaactagaacacaacaatccgctccacggtag 659 |||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 969 aacatcatagactaggacacaacaatctgctccccggtag 930 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 62 actgtattcacaagatatgacgctactgatg 92 |||||||||||||| |||||||||||||||| Sbjct: 1544 actgtattcacaaggtatgacgctactgatg 1514
>gb|U40219.1|PCU40219 Pennisetum ciliare possible apospory-associated protein mRNA, complete cds Length = 941 Score = 359 bits (181), Expect = 8e-96 Identities = 313/357 (87%) Strand = Plus / Minus Query: 299 gttgccgcccaccacgtccacagtgtccggcatatacaattcttcctctggctcattctt 358 |||||| |||||||| || |||||||| |||| ||||| |||||| || || ||||| || Sbjct: 684 gttgccacccaccacatcgacagtgtcaggcacatacagttcttcttcaggttcattttt 625 Query: 359 cagagcgttctttactatacactggaaagcctcctccacgttgattccatccttggcaga 418 ||| || |||||||| ||||| || ||||| || ||||| || |||| || |||||||| Sbjct: 624 cagggcattctttacaatacattgaaaagcatcttccacattagttccttctttggcaga 565 Query: 419 agtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcaga 478 ||||||||||| || ||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 564 tgtctcaaagtaaggtatgttgcctttcgaggcacaccaagcctttgcctttttctcaga 505 Query: 479 gaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaa 538 |||||| || ||||| |||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 504 gaccacacggctgttaccaccatcaacatcaactttgtttccaagcagaacaaaggggaa 445 Query: 539 gttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagatt 598 |||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 444 gttatcaggatcagatgggctagcctgaataagaaattcttcacgccaattgttcagatt 385 Query: 599 atcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgctccacg 655 |||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 384 atcaaacgatttcatagagttaacatcataaactagaacacaacaatcagctccacg 328
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 333 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 392 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 62656 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 62597 Query: 393 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 452 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 62596 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 62537 Query: 453 caccatgccttcgcctttttctcagagacc 482 ||||||||||| ||||| |||||||||||| Sbjct: 62536 caccatgcctttgccttcttctcagagacc 62507 Score = 123 bits (62), Expect = 8e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 562 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 621 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 62250 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 62191 Query: 622 catcgtaaactagaacacaacaatccgctccacggtag 659 |||| |||||||||||||| ||||| |||||||||||| Sbjct: 62190 catcataaactagaacacagcaatctgctccacggtag 62153 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 480 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 539 ||||| || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 62402 accacacggctgttgccaccgtctacatcaactttgttgcccaaaagaacaaaagggaag 62343 Query: 540 ttatcaggatctgatgggctagcctg 565 |||||||| ||||||||||| ||||| Sbjct: 62342 ttatcagggtctgatgggcttgcctg 62317 Score = 48.1 bits (24), Expect = 0.037 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 37 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 91 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 63272 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 63217
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 333 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 392 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 25422295 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 25422236 Query: 393 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 452 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 25422235 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 25422176 Query: 453 caccatgccttcgcctttttctcagagacc 482 ||||||||||| ||||| |||||||||||| Sbjct: 25422175 caccatgcctttgccttcttctcagagacc 25422146 Score = 123 bits (62), Expect = 8e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 562 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 621 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 25421889 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 25421830 Query: 622 catcgtaaactagaacacaacaatccgctccacggtag 659 |||| |||||||||||||| ||||| |||||||||||| Sbjct: 25421829 catcataaactagaacacagcaatctgctccacggtag 25421792 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 480 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 539 ||||| || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 25422041 accacacggctgttgccaccgtctacatcaactttgttgcccaaaagaacaaaagggaag 25421982 Query: 540 ttatcaggatctgatgggctagcctg 565 |||||||| ||||||||||| ||||| Sbjct: 25421981 ttatcagggtctgatgggcttgcctg 25421956 Score = 48.1 bits (24), Expect = 0.037 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 37 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 91 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 25422911 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 25422856
>gb|BT013071.1| Lycopersicon esculentum clone 114328R, mRNA sequence Length = 1042 Score = 170 bits (86), Expect = 4e-39 Identities = 221/266 (83%) Strand = Plus / Minus Query: 381 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 440 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 625 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 566 Query: 441 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 500 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 565 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 506 Query: 501 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 560 || |||||||||||||| ||||||| ||||| |||||||| || ||||| |||||||| Sbjct: 505 tcaacatcaactttgttccccagcacgacaaatgggaagttctctggatcagatgggctt 446 Query: 561 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 620 |||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || Sbjct: 445 gcctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattt 386 Query: 621 acatcgtaaactagaacacaacaatc 646 ||||| ||||| || ||||||||||| Sbjct: 385 acatcataaacaaggacacaacaatc 360
>dbj|AB071847.1| Arabidopsis thaliana mRNA for AtRab72, complete cds Length = 621 Score = 168 bits (85), Expect = 1e-38 Identities = 232/281 (82%) Strand = Plus / Minus Query: 378 cactggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatg 437 |||| ||||||| | || || |||| ||| || ||||| |||||||||||||| || ||| Sbjct: 512 cactcgaaagccgcatctacattgaatccttctttggcggaagtctcaaagtaaggaatg 453 Query: 438 ttccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttccca 497 || |||||||| |||||||||||||| |||||||||||||| ||||| | || || ||| Sbjct: 452 tttcctttagatgcacaccatgcctttgcctttttctcagaaaccactctgctcttgcca 393 Query: 498 ccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatggg 557 || || |||||| ||||| |||| || |||||| || ||||| |||||||||||||| Sbjct: 392 ccgtcaacatcagtcttgttccccaacacaacaaacggaaagttttcaggatctgatgga 333 Query: 558 ctagcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggag 617 ||||||||||| | |||||||| | |||||| || ||||||||||| |||||||| Sbjct: 332 ctagcctgaatcaagaactcttccctccagttattaagattatcaaaagatttcataaca 273 Query: 618 ttaacatcgtaaactagaacacaacaatccgctccacggta 658 || ||||| || || |||||||||||||||||||| ||||| Sbjct: 272 ttgacatcatacacaagaacacaacaatccgctcctcggta 232
>ref|NM_104107.2| Arabidopsis thaliana GTP binding AT1G52280 mRNA, complete cds Length = 939 Score = 167 bits (84), Expect = 6e-38 Identities = 207/248 (83%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 616 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 557 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 556 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 497 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 || || ||||| ||||||||||| || ||||||||||| | |||||||| | |||||| Sbjct: 496 aatggaaagttttcaggatctgaaggactagcctgaatcaagaactcttccctccagtta 437 Query: 591 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 650 || ||||||||||| |||||||| || ||||| || || |||||||||||||||||| Sbjct: 436 ttaagattatcaaaagatttcataacattgacatcatagacaagaacacaacaatccgct 377 Query: 651 ccacggta 658 || ||||| Sbjct: 376 cctcggta 369
>gb|AY096407.1| Arabidopsis thaliana putative GTP-binding protein RAB7D (At1g52280) mRNA, complete cds Length = 652 Score = 167 bits (84), Expect = 6e-38 Identities = 207/248 (83%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 479 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 420 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 419 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 360 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 || || ||||| ||||||||||| || ||||||||||| | |||||||| | |||||| Sbjct: 359 aatggaaagttttcaggatctgaaggactagcctgaatcaagaactcttccctccagtta 300 Query: 591 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 650 || ||||||||||| |||||||| || ||||| || || |||||||||||||||||| Sbjct: 299 ttaagattatcaaaagatttcataacattgacatcatagacaagaacacaacaatccgct 240 Query: 651 ccacggta 658 || ||||| Sbjct: 239 cctcggta 232
>gb|AY074361.1| Arabidopsis thaliana putative GTP-binding protein RAB7D (At1g52280) mRNA, complete cds Length = 894 Score = 167 bits (84), Expect = 6e-38 Identities = 207/248 (83%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 616 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 557 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 556 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 497 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 || || ||||| ||||||||||| || ||||||||||| | |||||||| | |||||| Sbjct: 496 aatggaaagttttcaggatctgaaggactagcctgaatcaagaactcttccctccagtta 437 Query: 591 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 650 || ||||||||||| |||||||| || ||||| || || |||||||||||||||||| Sbjct: 436 ttaagattatcaaaagatttcataacattgacatcatagacaagaacacaacaatccgct 377 Query: 651 ccacggta 658 || ||||| Sbjct: 376 cctcggta 369
>gb|DQ235201.1| Solanum tuberosum clone 171F12 unknown mRNA Length = 916 Score = 165 bits (83), Expect = 2e-37 Identities = 230/279 (82%) Strand = Plus / Minus Query: 381 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 440 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 567 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 508 Query: 441 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 500 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 507 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 448 Query: 501 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 560 || |||||||||||||| ||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 447 tcaacatcaactttgttccccagcacgacaaatggaaagttttctggatcagatgggctt 388 Query: 561 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 620 |||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || Sbjct: 387 gcctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattt 328 Query: 621 acatcgtaaactagaacacaacaatccgctccacggtag 659 ||||| ||||| || ||||||||||| || || |||||| Sbjct: 327 acatcataaacaaggacacaacaatcagcaccgcggtag 289
>gb|DQ222491.1| Solanum tuberosum clone 099C08 unknown mRNA Length = 967 Score = 165 bits (83), Expect = 2e-37 Identities = 230/279 (82%) Strand = Plus / Minus Query: 381 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 440 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 576 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 517 Query: 441 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 500 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 516 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 457 Query: 501 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 560 || |||||||||||||| ||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 456 tcaacatcaactttgttccccagcacgacaaatggaaagttttctggatcagatgggctt 397 Query: 561 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 620 |||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || Sbjct: 396 gcctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattt 337 Query: 621 acatcgtaaactagaacacaacaatccgctccacggtag 659 ||||| ||||| || ||||||||||| || || |||||| Sbjct: 336 acatcataaacaaggacacaacaatcagcaccgcggtag 298
>gb|AF116243.1|AF116243 Gossypium hirsutum RAS-related GTP-binding protein (Rab7) mRNA, complete cds Length = 1049 Score = 161 bits (81), Expect = 4e-36 Identities = 171/201 (85%) Strand = Plus / Minus Query: 414 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 473 ||||| ||||||||||| || ||||| ||||| || |||||||||||||| || || ||| Sbjct: 555 gcagaggtctcaaagtaaggtatgtttccttttgaagcacaccatgcctttgctttcttc 496 Query: 474 tcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaa 533 ||||| |||||||||||||| ||||| || |||||||| ||||| |||| || |||||| Sbjct: 495 tcagaaaccacgcgactgttaccaccgtcaacatcaaccttgtttcccaacacaacaaat 436 Query: 534 gggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttc 593 || ||||| ||||| || || || || |||||||| ||||||||||| ||||||||||| Sbjct: 435 ggaaagttttcagggtcagacggactcgcctgaatcagaaactcttctcgccagttgtta 376 Query: 594 agattatcaaatgatttcatg 614 ||||||||||| || |||||| Sbjct: 375 agattatcaaaggacttcatg 355
>ref|NM_112768.1| Arabidopsis thaliana GTP binding AT3G18820 mRNA, complete cds Length = 1027 Score = 147 bits (74), Expect = 5e-32 Identities = 206/250 (82%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 646 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 587 Query: 469 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 528 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 586 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 527 Query: 529 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 588 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 526 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 467 Query: 589 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 648 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 466 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 407 Query: 649 ctccacggta 658 | |||||||| Sbjct: 406 caccacggta 397
>gb|AY059072.1| Arabidopsis thaliana putative GTP binding protein (At3g18820) mRNA, complete cds Length = 652 Score = 147 bits (74), Expect = 5e-32 Identities = 206/250 (82%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 481 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 422 Query: 469 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 528 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 421 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 362 Query: 529 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 588 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 361 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 302 Query: 589 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 648 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 301 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 242 Query: 649 ctccacggta 658 | |||||||| Sbjct: 241 caccacggta 232
>gb|AY035137.1| Arabidopsis thaliana putative GTP binding protein (At3g18820) mRNA, complete cds Length = 857 Score = 147 bits (74), Expect = 5e-32 Identities = 206/250 (82%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 568 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 509 Query: 469 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 528 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 508 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 449 Query: 529 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 588 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 448 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 389 Query: 589 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 648 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 388 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 329 Query: 649 ctccacggta 658 | |||||||| Sbjct: 328 caccacggta 319
>dbj|AB071846.1| Arabidopsis thaliana mRNA for AtRab71, complete cds Length = 621 Score = 147 bits (74), Expect = 5e-32 Identities = 206/250 (82%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 481 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 422 Query: 469 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 528 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 421 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 362 Query: 529 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 588 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 361 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 302 Query: 589 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 648 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 301 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 242 Query: 649 ctccacggta 658 | |||||||| Sbjct: 241 caccacggta 232
>emb|BX823072.1|CNS0A63E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 807 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 429 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 370 Query: 469 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 528 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 369 ttttctctgaaaccactctgctgtttccatcatccacgtcaacgttgtttccgataagaa 310 Query: 529 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 588 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 309 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 250 Query: 589 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 648 |||||||||| ||||||||||||||||| || ||||| || || |||||||| |||| | Sbjct: 249 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatgag 190 Query: 649 ctccacggta 658 | |||||||| Sbjct: 189 caccacggta 180
>gb|L29274.1|TOBNTRAG Nicotiana tabacum SR1 Nt-rab7a mRNA, complete cds Length = 989 Score = 135 bits (68), Expect = 2e-28 Identities = 248/308 (80%) Strand = Plus / Minus Query: 351 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 410 ||||| |||||||| || || |||||||||||||||| | ||||| |||| ||| || Sbjct: 636 tcatttttcagagcatttttggctatacactggaaagctgcatccacattgaatccctct 577 Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 || || || |||||||| ||||| ||||| || || || |||||||||||||| | || Sbjct: 576 tttgccgaggtctcaaaatatggtatgtttcccttggaagcacaccatgcctttactttc 517 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||||||||||| |||||||| |||||||| ||||| | || || ||||| | | | Sbjct: 516 ttctcagagaccactcgactgttgccaccatcaacatctatcttattccccagtacgata 457 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 || || ||||| || ||||| |||||||| ||||| |||| ||| ||||| | ||||||| Sbjct: 456 aatggaaagttctcgggatcagatgggcttgcctggattaaaaattcttccctccagttg 397 Query: 591 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 650 || ||||| |||||||| ||||| || |||| || ||||||||||||||||| ||| Sbjct: 396 ttaagattctcaaatgacttcataacattcacataatatactagaacacaacaatctgct 337 Query: 651 ccacggta 658 |||||||| Sbjct: 336 ccacggta 329
>gb|U82219.1|PAU82219 Prunus armeniaca Rab7 GTP binding protein mRNA, complete cds Length = 987 Score = 133 bits (67), Expect = 8e-28 Identities = 229/283 (80%) Strand = Plus / Minus Query: 373 ctatacactggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatg 432 ||||||||||||| || || ||||| || | || || || ||||| ||||||||||||| Sbjct: 611 ctatacactggaaggcatcatccacattaaagccctcttttgcagaggtctcaaagtatg 552 Query: 433 ggatgttccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgt 492 | ||||| || || || |||||||| ||||| || || || ||||| ||||| ||||| | Sbjct: 551 gtatgtttcccttggaagcacaccaggcctttgctttcttttcagaaaccactcgactat 492 Query: 493 tcccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctg 552 | |||||||| ||||||| ||||| |||| || ||||| |||||||| ||||| |||| Sbjct: 491 ttccaccatcaacatcaatcttgttccccaacacgacaaatgggaagttttcagggtctg 432 Query: 553 atgggctagcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttca 612 |||| | |||||||| ||||| ||||| | ||||||||| ||||| ||||||||||||| Sbjct: 431 atggagtggcctgaatcagaaattcttccctccagttgttaagattttcaaatgatttca 372 Query: 613 tggagttaacatcgtaaactagaacacaacaatccgctccacg 655 || || ||||| || || |||||||| ||||| || ||||| Sbjct: 371 tgacattcacatcatacacaagaacacagcaatctgcaccacg 329
>gb|AY084266.1| Arabidopsis thaliana clone 101693 mRNA, complete sequence Length = 1022 Score = 131 bits (66), Expect = 3e-27 Identities = 204/250 (81%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 640 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 581 Query: 469 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 528 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 580 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 521 Query: 529 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 588 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | || || Sbjct: 520 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctcctgt 461 Query: 589 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 648 |||| ||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 460 tgttaagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 401 Query: 649 ctccacggta 658 | |||||||| Sbjct: 400 caccacggta 391
>emb|Z73943.1|LJRAB7D L.japonicus mRNA for small GTP-binding protein, RAB7D Length = 1058 Score = 117 bits (59), Expect = 5e-23 Identities = 227/283 (80%) Strand = Plus / Minus Query: 332 atacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctc 391 ||||| |||||| ||||| |||||||| || || || ||| ||||||| |||||||| | Sbjct: 636 atacatttcttcttctggttcattcttgagtgcattttttgctatacattggaaagcagc 577 Query: 392 ctccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggc 451 || || |||| ||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 576 ttcaacattgaatccttcttttgcagaggtctcgaagtatggtatgtttccctttgaagc 517 Query: 452 acaccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaac 511 |||||||||||| || || |||||||| | || || || ||||||||||| ||||| | Sbjct: 516 acaccatgcctttgctttcttctcagaaataactcggctattcccaccatcaacatctat 457 Query: 512 tttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattag 571 |||||| |||| | |||||| |||||||| ||||| || ||||| |||||||| || || Sbjct: 456 tttgtttcccaagacaacaaatgggaagttttcagggtcagatggactagcctggataag 397 Query: 572 aaactcttcacgccagttgttcagattatcaaatgatttcatg 614 ||| ||||| ||||| | ||| || || ||||| ||||||||| Sbjct: 396 aaattcttctcgccaatggttgaggttgtcaaaagatttcatg 354
>dbj|AK070320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D24, full insert sequence Length = 1188 Score = 107 bits (54), Expect = 5e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 351 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 410 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 658 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 599 Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 598 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 539 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 538 ttctcagaaacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 479 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 |||||||| || || ||||||||||||||||| |||||||| || || ||||||||| || Sbjct: 478 aaagggaaattctctggatctgatgggctagcttgaattaggaattcctcacgccagctg 419 Query: 591 tt 592 || Sbjct: 418 tt 417
>dbj|AK059958.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E06, full insert sequence Length = 1178 Score = 107 bits (54), Expect = 5e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 351 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 410 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 646 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 587 Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 586 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 527 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 526 ttctcagaaacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 467 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 |||||||| || || ||||||||||||||||| |||||||| || || ||||||||| || Sbjct: 466 aaagggaaattctctggatctgatgggctagcttgaattaggaattcctcacgccagctg 407 Query: 591 tt 592 || Sbjct: 406 tt 405
>gb|L29275.1|TOBNTRAH Nicotiana tabacum SR1 Nt-rab7b mRNA, complete cds Length = 1563 Score = 107 bits (54), Expect = 5e-20 Identities = 168/206 (81%) Strand = Plus / Minus Query: 408 tccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcc 467 |||||||| |||||||||||||| || ||||| || || || || ||||| || ||| Sbjct: 527 tccttggctgaagtctcaaagtagggaatgttaccctttgaagcgcaccaggctcgagcc 468 Query: 468 tttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcaga 527 |||||||| || ||||| | |||||| |||||||| | |||||||||||| ||||||| | Sbjct: 467 tttttctccgacaccactctactgtttccaccatcaatatcaactttgttccccagcaca 408 Query: 528 acaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccag 587 ||||| || || || || ||||| || ||||| |||||||||||||||||||| | ||| Sbjct: 407 acaaatggaaaattttctggatccgacgggcttgcctgaattagaaactcttctctccaa 348 Query: 588 ttgttcagattatcaaatgatttcat 613 ||||| | || |||||||| ||||| Sbjct: 347 ttgtttaagttttcaaatgacttcat 322
>dbj|AB024995.1| Cicer arietinum mRNA for rab-type small GTP-binding protein, partial cds Length = 578 Score = 107 bits (54), Expect = 5e-20 Identities = 234/294 (79%) Strand = Plus / Minus Query: 321 gtgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacac 380 ||||| |||| ||||| |||||| || || |||||||| || || || ||| |||||||| Sbjct: 306 gtgtcaggcagatacatttcttcttcaggttcattcttgagtgcattttttgctatacac 247 Query: 381 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 440 |||||||| | || || || | ||| || || ||||| |||||||||||||| ||||| Sbjct: 246 tggaaagcagcttcaacattaaatccttcttttgcagatgtctcaaagtatggtatgttt 187 Query: 441 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 500 || || || |||||||||||||| || || |||||||| | || | || || |||||| Sbjct: 186 ccctttgaagcacaccatgcctttgctttcttctcagaaataactctgctatttccacca 127 Query: 501 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 560 || ||||| | |||||| |||| | ||||||||| ||||| ||||| || ||||| ||| Sbjct: 126 tcaacatcgattttgtttcccaagacaacaaaaggaaagttttcagggtcagatggacta 67 Query: 561 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatg 614 |||||||| ||||| ||||| | ||| | ||| || || ||||| ||||||||| Sbjct: 66 gcctgaatgagaaattcttctctccaatggttaaggttttcaaaagatttcatg 13
>gb|AY365246.1| Cucumis sativus putative GTP-binding protein (Rab7b) mRNA, complete cds Length = 1008 Score = 103 bits (52), Expect = 7e-19 Identities = 190/236 (80%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 ||||||||||| |||||||| ||||| |||||||| || |||||||| || |||||| Sbjct: 515 ttggcagaagtttcaaagtacgggatattcccttttgatgcacaccaagctcgtgccttt 456 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 ||||| || || || | |||||| || ||||| ||||||||||| || || | | |||| Sbjct: 455 ttctctgaaacaactctactgtttccgccatcaacatcaactttatttcctaaaacaaca 396 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 ||||| || || || ||||| || ||||| ||||| || || || ||||| ||||||||| Sbjct: 395 aaaggaaaattttccggatcggaagggcttgcctggataaggaattcttcccgccagttg 336 Query: 591 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 646 || ||||| |||||||||||||| || || ||||| || || ||||| || ||||| Sbjct: 335 ttaagattgtcaaatgatttcattgaattgacatcatacaccagaacgcagcaatc 280
>gb|AY108223.1| Zea mays PCO119199 mRNA sequence Length = 1158 Score = 103 bits (52), Expect = 7e-19 Identities = 154/188 (81%) Strand = Plus / Minus Query: 420 gtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcagag 479 ||||||||||| |||||||| || || || ||||||||||| || ||||| |||||||| Sbjct: 609 gtctcaaagtaggggatgtttccctttgaagcacaccatgctttagccttcttctcagaa 550 Query: 480 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 539 || || ||||| |||||||| ||||| | |||||||| |||| |||||| ||||| Sbjct: 549 acagtccggctgttaccaccatcaacatcgatcttgttaccaagcacaacaaatgggaaa 490 Query: 540 ttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagatta 599 || || || ||||||||||| || |||||||| || || |||||||||||||| || || Sbjct: 489 ttctctgggtctgatgggctggcttgaattaggaattcctcacgccagttgttgagcttt 430 Query: 600 tcaaatga 607 |||||||| Sbjct: 429 tcaaatga 422
>ref|NM_188576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 654 Score = 91.7 bits (46), Expect = 3e-15 Identities = 193/242 (79%) Strand = Plus / Minus Query: 351 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 410 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 539 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 480 Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 479 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 420 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 |||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 419 ttctcactcacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 360 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 |||||||| || || ||||||||||||||||| |||||||| || || ||||||||| || Sbjct: 359 aaagggaaattctctggatctgatgggctagcttgaattaggaattcctcacgccagctg 300 Query: 591 tt 592 || Sbjct: 299 tt 298
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete sequence Length = 75948 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 64675 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 64616 Query: 471 ttctcaga 478 |||||||| Sbjct: 64615 ttctcaga 64608 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 573 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 632 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 64334 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatagaca 64275 Query: 633 agaacacaacaatccgctccacggta 658 |||||||||||||||||||| ||||| Sbjct: 64274 agaacacaacaatccgctcctcggta 64249 Score = 44.1 bits (22), Expect = 0.58 Identities = 58/70 (82%) Strand = Plus / Minus Query: 495 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 554 |||||||| |||||| ||||| |||| || |||||| || ||||| ||||||||||| Sbjct: 64513 ccaccatcaacatcagtcttgttccccaacacaacaaatggaaagttttcaggatctgaa 64454 Query: 555 gggctagcct 564 || ||||||| Sbjct: 64453 ggactagcct 64444
>ref|NM_112480.2| Arabidopsis thaliana GTP binding AT3G16100 mRNA, complete cds Length = 940 Score = 81.8 bits (41), Expect = 3e-12 Identities = 206/261 (78%) Strand = Plus / Minus Query: 399 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 458 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 589 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 530 Query: 459 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 518 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 529 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 470 Query: 519 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 578 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 469 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 410 Query: 579 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 638 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 409 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 350 Query: 639 caacaatccgctccacggtag 659 ||||| |||||||| |||||| Sbjct: 349 caacagtccgctcctcggtag 329
>emb|Z73942.1|LJRAB7C L.japonicus mRNA for small GTP-binding protein, RAB7C Length = 1022 Score = 81.8 bits (41), Expect = 3e-12 Identities = 194/245 (79%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 |||||||| |||||||| || ||||| || ||||| || |||||||| || ||||| Sbjct: 566 ttggcagatgtctcaaaataagggatatttccttttgatgcacaccaagcacgagccttc 507 Query: 471 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 530 || || || ||||| | ||||||||||||||| | ||| | ||||| || | | |||| Sbjct: 506 ttttctgaaaccactctactgttcccaccatcaatatctatcttgtttcctataacaaca 447 Query: 531 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 590 ||||| || || || ||||| || || ||||| ||||| ||||| ||||| | ||||||| Sbjct: 446 aaaggaaaattctctggatcggaaggactagcttgaatgagaaattcttccctccagttg 387 Query: 591 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 650 || || || |||||||||||||| || |||||||| || || |||||||| ||||| || Sbjct: 386 ttaaggttgtcaaatgatttcattgaattaacatcatatacaagaacacagcaatcagca 327 Query: 651 ccacg 655 ||||| Sbjct: 326 ccacg 322
>gb|BT006376.1| Arabidopsis thaliana At3g16100 gene, complete cds Length = 621 Score = 81.8 bits (41), Expect = 3e-12 Identities = 206/261 (78%) Strand = Plus / Minus Query: 399 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 458 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 491 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 432 Query: 459 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 518 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 431 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 372 Query: 519 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 578 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 371 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 312 Query: 579 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 638 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 311 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 252 Query: 639 caacaatccgctccacggtag 659 ||||| |||||||| |||||| Sbjct: 251 caacagtccgctcctcggtag 231
>emb|BX823067.1|CNS0A5YM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 759 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 546 ggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagattatcaaat 605 ||||||||||| || ||||| || ||||| ||||| | ||||||||||||||| |||||| Sbjct: 291 ggatctgatggactcgcctggatcagaaattcttccctccagttgttcagattttcaaat 232 Query: 606 gatttcatggagttaacatcgtaaactagaacacaacaatccgctccacggta 658 ||||||||||| || ||||| || | || | ||| ||||| ||||||||||| Sbjct: 231 gatttcatggaattgacatcatatataagtatacagcaatcagctccacggta 179
>gb|AY084691.1| Arabidopsis thaliana clone 115178 mRNA, complete sequence Length = 896 Score = 81.8 bits (41), Expect = 3e-12 Identities = 206/261 (78%) Strand = Plus / Minus Query: 399 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 458 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 593 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 534 Query: 459 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 518 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 533 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 474 Query: 519 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 578 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 473 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 414 Query: 579 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 638 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 413 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 354 Query: 639 caacaatccgctccacggtag 659 ||||| |||||||| |||||| Sbjct: 353 caacagtccgctcctcggtag 333
>dbj|AB026654.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVE11 Length = 75508 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 570 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 629 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 69266 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 69207 Query: 630 actagaacacaacaatccgctccacggta 658 || |||||||| ||||| || |||||||| Sbjct: 69206 acaagaacacagcaatcagcaccacggta 69178 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 409 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 468 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 69610 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 69551 Query: 469 ttttctc 475 ||||||| Sbjct: 69550 ttttctc 69544
>dbj|AB071848.1| Arabidopsis thaliana mRNA for AtRab73, complete cds Length = 621 Score = 81.8 bits (41), Expect = 3e-12 Identities = 206/261 (78%) Strand = Plus / Minus Query: 399 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 458 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 491 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 432 Query: 459 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 518 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 431 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 372 Query: 519 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 578 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 371 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 312 Query: 579 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 638 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 311 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 252 Query: 639 caacaatccgctccacggtag 659 ||||| |||||||| |||||| Sbjct: 251 caacagtccgctcctcggtag 231
>emb|BX824542.1|CNS0A5QW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 546 ggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagattatcaaat 605 ||||||||||| || ||||| || | |||||||| | ||||||||||| ||| |||||| Sbjct: 447 ggatctgatggactcgcctggatcaaaaactcttacctccagttgttcatattttcaaat 388 Query: 606 gatttcatggagttaacatcgtaaactagaacacaacaatccgctccacggta 658 ||| ||||||| || ||||| || || | |||||| |||||||| |||||||| Sbjct: 387 gatctcatggaattcacatcatatacaataacacagcaatccgcaccacggta 335
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 495 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 554 |||||||| ||||||| |||||| || || | |||||||||||| || || ||||||||| Sbjct: 7045409 ccaccatcaacatcaattttgtttccaagtacaacaaaagggaaattctctggatctgat 7045350 Query: 555 gggctagcctg 565 ||||||||||| Sbjct: 7045349 gggctagcctg 7045339 Score = 56.0 bits (28), Expect = 2e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 351 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 410 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 7045639 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 7045580 Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 7045579 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 7045520 Query: 471 ttctcaga 478 |||||||| Sbjct: 7045519 ttctcaga 7045512
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 495 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 554 |||||||| ||||||| |||||| || || | |||||||||||| || || ||||||||| Sbjct: 32989 ccaccatcaacatcaattttgtttccaagtacaacaaaagggaaattctctggatctgat 32930 Query: 555 gggctagcctg 565 ||||||||||| Sbjct: 32929 gggctagcctg 32919 Score = 56.0 bits (28), Expect = 2e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 351 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 410 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 33219 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 33160 Query: 411 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 470 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 33159 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 33100 Query: 471 ttctcaga 478 |||||||| Sbjct: 33099 ttctcaga 33092
>gb|U87142.1|MCU87142 Mesembryanthemum crystallinum Nt-rab7a homolog mRNA, complete cds Length = 999 Score = 67.9 bits (34), Expect = 4e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 452 acaccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaac 511 ||||||||| || ||||||||||| || ||||| | | | | |||||||| ||||| | Sbjct: 525 acaccatgcttttgcctttttctcggaaaccactctgccgctgccaccatcaacatctat 466 Query: 512 tttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattag 571 ||||| ||||||| |||||||||||||||||| ||||| | ||||| ||||| |||| Sbjct: 465 cttgttccccagcaaaacaaaagggaagttatctggatcagccgggcttgcctgtattaa 406 Query: 572 aaactc 577 |||||| Sbjct: 405 aaactc 400
>gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete sequence Length = 95118 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 584 ccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaaca 643 ||||||||| || || |||||||||||||| || ||||||||||| || |||||||| || Sbjct: 258 ccagttgttaaggttgtcaaatgatttcattgaattaacatcgtatacaagaacacagca 317 Query: 644 atccgctccacg 655 ||| || ||||| Sbjct: 318 atcagccccacg 329
>gb|AY829438.1| Pennisetum glaucum Rab7 mRNA, complete cds Length = 1090 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 495 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 554 |||||||| || |||| ||||| || || |||||||| ||||| || || ||||| ||| Sbjct: 459 ccaccatcaacgtcaatcttgtttccaagtagaacaaatgggaaattctctggatcagat 400 Query: 555 gggctagcctgaattagaaactcttcacgccagttgttcagattatcaaatga 607 |||||||| |||| ||| || || ||||||||||| || || || |||||||| Sbjct: 399 gggctagcttgaagtaggaattcctcacgccagttattgagcttctcaaatga 347
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 414 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 473 ||||| ||||| ||||| ||||| |||||||| || ||||||| | || || || ||| Sbjct: 610 gcagatgtctcgaagtaggggatattcccttttgaaacacaccagtcatttgctttcttc 551 Query: 474 tcagagaccacgcgactgttcccaccatc 502 ||||||||||| ||||| ||||||||||| Sbjct: 550 tcagagaccactcgactattcccaccatc 522
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 ||||||||||| ||| |||||||| | |||||||||||||| |||||||| || ||||| Sbjct: 217957 ctggaaagcctgctcgacgttgatagcctccttggcagaagtttcaaagtaaggaatgtt 218016
>ref|XM_567629.1| Cryptococcus neoformans var. neoformans JEC21 RAB small monomeric GTPase (CNK00660) partial mRNA Length = 964 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 ||||||||||| ||| |||||||| | |||||||||||||| |||||||| || ||||| Sbjct: 519 ctggaaagcctgctcgacgttgatagcctccttggcagaagtttcaaagtaaggaatgtt 460
>gb|L14930.1|SOYRAB7P Glycine max (Rab7p) mRNA, complete cds Length = 1166 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 423 tcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcagagacc 482 |||||||| || || |||||||| | ||||||||| |||| || || |||||||| ||| Sbjct: 708 tcaaagtagggaatattcccttttgcggcacaccagtcctttgctttcttctcagaaacc 649 Query: 483 acgcgactgttcccaccatc 502 || ||||| ||||||||||| Sbjct: 648 actcgactattcccaccatc 629
>emb|Z73940.1|LJRAB7A L.japonicus mRNA for small GTP-binding protein, RAB7A Length = 930 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 570 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 629 |||||||| ||| ||||||||| || |||||||||| |||||| |||||||| || Sbjct: 355 agaaactcctcatgccagttgtcaagggtatcaaatgacttcatgacattaacatcatac 296 Query: 630 actagaacacaacaatccgctcc 652 ||||||||||| ||||| ||||| Sbjct: 295 actagaacacagcaatctgctcc 273 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Minus Query: 414 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 473 ||||| ||||||||||| || || |||||||| || |||||||| | || || || ||| Sbjct: 511 gcagatgtctcaaagtagggaatattcccttttgaagcacaccagtcttttgctttcttc 452 Query: 474 tcagagaccacgcgactgttcccaccatctacatcaactttgtt 517 ||||| ||||| | ||| ||||| ||||| | ||||| |||||| Sbjct: 451 tcagaaaccactctactattcccgccatcaatatcaattttgtt 408
>ref|NM_103820.2| Arabidopsis thaliana GTP binding AT1G49300 transcript variant AT1G49300.1 mRNA, complete cds Length = 963 Score = 50.1 bits (25), Expect = 0.009 Identities = 103/129 (79%) Strand = Plus / Minus Query: 527 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 586 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 452 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 393 Query: 587 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 646 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 392 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 333 Query: 647 cgctccacg 655 || ||||| Sbjct: 332 agcaccacg 324
>ref|NM_001036084.1| Arabidopsis thaliana GTP binding AT1G49300 transcript variant AT1G49300.2 mRNA, complete cds Length = 1001 Score = 50.1 bits (25), Expect = 0.009 Identities = 103/129 (79%) Strand = Plus / Minus Query: 527 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 586 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 456 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 397 Query: 587 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 646 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 396 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 337 Query: 647 cgctccacg 655 || ||||| Sbjct: 336 agcaccacg 328
>emb|X65650.1|PSGTPBP P.sativum mRNA rab for ras-related GTP-binding protein Length = 915 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 414 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 473 ||||| |||||||| |||||||| || ||||| | |||||||||||| ||||| || Sbjct: 547 gcagatgtctcaaaatatgggatatttccttttgctgcacaccatgcccgagccttcttt 488 Query: 474 tcagagaccacgcgactgttcccaccatc 502 ||||| ||||| | |||||| |||||||| Sbjct: 487 tcagaaaccactctactgtttccaccatc 459 Score = 48.1 bits (24), Expect = 0.037 Identities = 75/92 (81%) Strand = Plus / Minus Query: 564 tgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaaca 623 ||||| ||||||||||| | |||||| || || || |||||||| |||| || |||||| Sbjct: 397 tgaatgagaaactcttccctccagttattaaggttgtcaaatgacttcactgaattaaca 338 Query: 624 tcgtaaactagaacacaacaatccgctccacg 655 || || || |||||||| ||||| || ||||| Sbjct: 337 tcatatacaagaacacagcaatcagcaccacg 306
>emb|BX816308.1|CNS0AAI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 656 Score = 50.1 bits (25), Expect = 0.009 Identities = 103/129 (79%) Strand = Plus / Minus Query: 527 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 586 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 266 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 207 Query: 587 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 646 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 206 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 147 Query: 647 cgctccacg 655 || ||||| Sbjct: 146 agcaccacg 138
>gb|BT004594.1| Arabidopsis thaliana At1g49300 gene, complete cds Length = 621 Score = 50.1 bits (25), Expect = 0.009 Identities = 103/129 (79%) Strand = Plus / Minus Query: 527 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 586 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 363 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 304 Query: 587 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 646 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 303 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 244 Query: 647 cgctccacg 655 || ||||| Sbjct: 243 agcaccacg 235
>dbj|AB071849.1| Arabidopsis thaliana mRNA for AtRab74, complete cds Length = 621 Score = 50.1 bits (25), Expect = 0.009 Identities = 103/129 (79%) Strand = Plus / Minus Query: 527 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 586 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 363 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 304 Query: 587 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 646 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 303 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 244 Query: 647 cgctccacg 655 || ||||| Sbjct: 243 agcaccacg 235
>ref|NM_064148.2| Caenorhabditis elegans RAB family member (rab-7) (rab-7) mRNA, complete cds Length = 1094 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 555 gggctagcctgaattagaaactcttcacgcca 586 |||||||||||||| |||||||| |||||||| Sbjct: 369 gggctagcctgaatcagaaactcgtcacgcca 338
>ref|XM_640819.1| Dictyostelium discoideum Rab GTPase (DDB0191507), partial mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttcccttt 445 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 473 ttggcagaagtttcaaagtatggaatgttaccttt 439
>gb|U02928.1|DDU02928 Dictyostelium discoideum Ax3 Rab7 mRNA, complete cds Length = 769 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 411 ttggcagaagtctcaaagtatgggatgttcccttt 445 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 523 ttggcagaagtttcaaagtatggaatgttaccttt 489
>gb|BC072470.1| Rattus norvegicus RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:91396 IMAGE:7098657), complete cds Length = 2107 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatc 550 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 545 ttgtttcccaacacaacaaaagggaagttctcaggatc 508
>gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 genomic sequence, complete sequence Length = 125021 Score = 44.1 bits (22), Expect = 0.58 Identities = 70/86 (81%) Strand = Plus / Plus Query: 570 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 629 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 107533 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 107592 Query: 630 actagaacacaacaatccgctccacg 655 || |||||||| ||||| || ||||| Sbjct: 107593 acaagaacacagcaatcagcaccacg 107618
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence Length = 93173 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 488 actgttcccaccatctacatcaactttgtt 517 |||||| ||||||||||||||||| ||||| Sbjct: 56239 actgtttccaccatctacatcaaccttgtt 56210
>emb|X12535.1|RNRASP23 Rat mRNA for ras-related protein p23 Length = 1269 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatc 550 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 418 ttgtttcccaacacaacaaaagggaagttctcaggatc 381
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence Length = 114538 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 488 actgttcccaccatctacatcaactttgtt 517 |||||| ||||||||||||||||| ||||| Sbjct: 12039 actgtttccaccatctacatcaaccttgtt 12010
>ref|NM_023950.3| Rattus norvegicus RAB7, member RAS oncogene family (Rab7), mRNA Length = 2107 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatc 550 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 545 ttgtttcccaacacaacaaaagggaagttctcaggatc 508
>gb|AF286535.1|AF286535 Rattus norvegicus GTP-binding protein RAB7 (Rab7) mRNA, complete cds Length = 861 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatc 550 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 541 ttgtttcccaacacaacaaaagggaagttctcaggatc 504
>dbj|AB158428.1| Rattus norvegicus Rab7 mRNA for RAB7, complete cds, strain:LEC/Crj Length = 624 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatc 550 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 377 ttgtttcccaacacaacaaaagggaagttctcaggatc 340
>dbj|AB158427.1| Rattus norvegicus Rab7 mRNA for RAB7, complete cds, strain:F344/DuCrj Length = 624 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 513 ttgttacccagcagaacaaaagggaagttatcaggatc 550 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 377 ttgtttcccaacacaacaaaagggaagttctcaggatc 340
>gb|AC148465.2| Xenopus tropicalis clone CH216-65A19, complete sequence Length = 167567 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cccacagttgtgggccctcat 265 ||||||||||||||||||||| Sbjct: 110353 cccacagttgtgggccctcat 110333
>emb|Z66516.1|CEW03C9 Caenorhabditis elegans Cosmid W03C9, complete sequence Length = 36103 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 558 ctagcctgaattagaaactcttcacgcca 586 ||||||||||| |||||||| |||||||| Sbjct: 33653 ctagcctgaatcagaaactcgtcacgcca 33681
>emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in linkage group 14, complete sequence Length = 179550 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 actacacaaacgtccacaaat 124 ||||||||||||||||||||| Sbjct: 170400 actacacaaacgtccacaaat 170420
>gb|AC093301.3| Homo sapiens chromosome 5 clone RP11-565F4, complete sequence Length = 178545 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 gttcagattatcaaatgattt 610 ||||||||||||||||||||| Sbjct: 57815 gttcagattatcaaatgattt 57835
>gb|U13170.1|CRU13170 Chlamydomonas reinhardtii YptC5 (yptC5) gene, complete cds Length = 2990 Score = 42.1 bits (21), Expect = 2.3 Identities = 69/85 (81%) Strand = Plus / Minus Query: 391 cctccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagagg 450 ||||||||||||| | |||||||| || ||||| ||||| || ||| | || || |||| Sbjct: 2237 cctccacgttgatgtcctccttggccgacgtctcgaagtagggtatgctgcccttggagg 2178 Query: 451 cacaccatgccttcgcctttttctc 475 | ||||| ||||| ||||| ||||| Sbjct: 2177 cgcaccaggccttggccttcttctc 2153
>ref|XM_526302.1| PREDICTED: Pan troglodytes similar to Ras-related protein Rab-7 (LOC470919), mRNA Length = 624 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence Length = 135091 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 gttgccgcccaccacgtccacagtgtcc 326 ||||||||||||||| ||| |||||||| Sbjct: 73094 gttgccgcccaccacttcctcagtgtcc 73067
>gb|AY321151.1| Aiptasia pulchella Rab7 mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 ctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||||||||| | || |||||| |||||||||||| |||||||| Sbjct: 616 ctccacgttgatggcttctttggcactagtctcaaagtaggggatgtt 569
>ref|NM_004637.5| Homo sapiens RAB7, member RAS oncogene family (RAB7), mRNA Length = 2240 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 733 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 674
>gb|AC186172.1| Ornithorhynchus anatinus chromosome UNK clone OABb-43A1, complete sequence Length = 180865 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ttcctctggctcattcttca 360 |||||||||||||||||||| Sbjct: 4032 ttcctctggctcattcttca 4051
>gb|U44104.1|HSU44104 Homo sapiens small GTP binding protein Rab7 mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome Length = 359853 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tactgatgataatgataaaa 104 |||||||||||||||||||| Sbjct: 344585 tactgatgataatgataaaa 344604
>ref|XM_748345.1| Aspergillus fumigatus Af293 Rab small monomeric GTPase Rab7 (Afu5g12130) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 624 tcgtaaactagaacacaacaatccgctccacggtag 659 ||||| || ||||||||||||||||| || |||||| Sbjct: 254 tcgtataccagaacacaacaatccgcaccccggtag 219
>gb|AC124598.5| Mus musculus BAC clone RP23-22P3 from 13, complete sequence Length = 220624 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tccttggcagaagtctcaaa 427 |||||||||||||||||||| Sbjct: 37282 tccttggcagaagtctcaaa 37301
>gb|AC113016.7| Mus musculus chromosome 9, clone RP23-181L13, complete sequence Length = 213244 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 ccagttgttcagattatcaa 603 |||||||||||||||||||| Sbjct: 73619 ccagttgttcagattatcaa 73638
>emb|AL160059.7| Human DNA sequence from clone RP11-94G15 on chromosome 1 Contains the 5' end of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 153926 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cactggaaagcctcctccac 397 |||||||||||||||||||| Sbjct: 89435 cactggaaagcctcctccac 89416
>emb|X93499.1|HSRAB7 H.sapiens mRNA for RAB7 protein Length = 2264 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 1103 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 1044
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tacccagcagaacaaaaggg 536 |||||||||||||||||||| Sbjct: 118936 tacccagcagaacaaaaggg 118955
>gb|BC008721.2| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:8453 IMAGE:2821435), complete cds Length = 1489 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 676 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 617
>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17, complete sequence Length = 165743 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gatgataatgataaaactac 108 |||||||||||||||||||| Sbjct: 152227 gatgataatgataaaactac 152208
>emb|CR859246.1| Pongo pygmaeus mRNA; cDNA DKFZp459E131 (from clone DKFZp459E131) Length = 2251 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 710 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 651
>dbj|AK094449.1| Homo sapiens cDNA FLJ37130 fis, clone BRACE2023069, weakly similar to RAS-RELATED PROTEIN RAB-7 Length = 1911 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 414 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 355
>gb|AF498942.1| Homo sapiens small GTP binding protein RAB7 (RAB7) mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>emb|BX322796.12| Zebrafish DNA sequence from clone DKEY-210F16 in linkage group 17, complete sequence Length = 68234 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gatgataatgataaaactac 108 |||||||||||||||||||| Sbjct: 33118 gatgataatgataaaactac 33099
>gb|AC023598.30| Homo sapiens 3 BAC RP11-221E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66685 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 49255 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 49314
>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence Length = 133042 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 tttactatacactggaaagc 388 |||||||||||||||||||| Sbjct: 31736 tttactatacactggaaagc 31755
>gb|AC144772.2| Mus musculus BAC clone RP24-173G12 from chromosome 15, complete sequence Length = 160630 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 acactggaaagcctcctcca 396 |||||||||||||||||||| Sbjct: 110226 acactggaaagcctcctcca 110207
>gb|AC009567.8|AC009567 Homo sapiens chromosome 4, clone RP11-21G20, complete sequence Length = 164823 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 cctgaattagaaactcttca 581 |||||||||||||||||||| Sbjct: 157683 cctgaattagaaactcttca 157702
>dbj|AK000826.1| Homo sapiens cDNA FLJ20819 fis, clone ADSE00511 Length = 2190 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 676 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 617
>gb|AF050175.1|AF050175 Homo sapiens Rab7 (Rab7) gene, complete cds Length = 624 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>dbj|AK113741.1| Ciona intestinalis cDNA, clone:cicl007i22, full insert sequence Length = 2711 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 agattatcaaatgatttcat 613 |||||||||||||||||||| Sbjct: 948 agattatcaaatgatttcat 929
>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence Length = 240321 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tccttggcagaagtctcaaa 427 |||||||||||||||||||| Sbjct: 19677 tccttggcagaagtctcaaa 19658
>gb|BC013728.1| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:17256 IMAGE:3882701), complete cds Length = 1358 Score = 40.1 bits (20), Expect = 9.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 380 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 439 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 516 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 457
>gb|L08131.1|VVCPTVD Volvox carteri GTP-binding protein (yptV5) gene, complete CDS Length = 3102 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 420 gtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctc 475 |||||||||||||| ||| | || || || || ||||||||||| ||||| ||||| Sbjct: 1987 gtctcaaagtatggtatgctgcccttggacgcgcaccatgccttagccttcttctc 1932 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,303,634 Number of Sequences: 3902068 Number of extensions: 5303634 Number of successful extensions: 99211 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98945 Number of HSP's gapped (non-prelim): 249 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)