ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17p03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M62720.1|WHTUCP1A Wheat ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 773 Score = 1035 bits (522), Expect = 0.0 Identities = 593/617 (96%) Strand = Plus / Minus Query: 4 ataaaatctttacaatggctagcatgccttagttcaccaaacaggtcacacgcactgaaa 63 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 764 ataaaatctttacaatggctaacatgccttagttcaccaaacaggtcacacacactgaaa 705 Query: 64 aaacaacaggagatcaagcacagggacacaacggccatgggttttttaatgttttagttc 123 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 704 aaacaacaggagatcaagcacagggacacaacggccatggggttttcaatgttttagttc 645 Query: 124 ggtggtacagaccagcaaagccagaaatggagacgttccgggcatcgcttattgcaggac 183 || |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 644 ggcggtacagaccagcaaagccagaaatggagacgttccgggcgttgcttattgcaggat 585 Query: 184 ctggtgacgctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgta 243 |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 584 ctggcaacgctagtccgctgtccagctctgctccacgacctcacgaaccttgcggttgta 525 Query: 244 ctcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaattcggatt 303 |||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 524 ctcgcgcttgttctcgctgtacattctggctgcttcagagttcgcaggagaattcgggtt 465 Query: 304 cgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatatagggct 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 cgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatatagggct 405 Query: 364 ccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaa 423 |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 404 ccactggttctgtaggatgtccaagcagatgcttccatctgcataaatgtttgggtgaaa 345 Query: 424 catccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcag 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 catccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcag 285 Query: 484 ggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgtt 543 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 284 ggtcagcttgaacgtacctccatcccacggcgtgtcatcaggcccaaatatgacggcgtt 225 Query: 544 ccagagcgttatgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctg 603 |||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 224 ccagagggtgatgttgttgtcgtgcggcgcgccgctgatgccggcgggcgggtcctgctg 165 Query: 604 caggcgcttgaagtcgc 620 ||| ||||||||||||| Sbjct: 164 cagccgcttgaagtcgc 148
>gb|BT017249.1| Zea mays clone EL01N0307D01.c mRNA sequence Length = 863 Score = 539 bits (272), Expect = e-150 Identities = 382/419 (91%) Strand = Plus / Minus Query: 200 gctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgttctcg 259 |||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 625 gctgtccagctctgctccacaacctcgcgaactttgcggttgtactcgcgcttgttctcg 566 Query: 260 ctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcacagcagg 319 ||| ||||||| |||||||| |||||||| |||||||| || || ||||| ||||||||| Sbjct: 565 ctgaacattctcgctgcttcagagttggcaggagaatttgggtttgggtcacacagcagg 506 Query: 320 gactggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtagg 379 ||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||| Sbjct: 505 gactgaatagaggtcaatattgccgcaacatcgtatataggactccactggttttgtagg 446 Query: 380 atatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgagacaaac 439 || ||||| |||||||||||||| ||||| ||||||||||| |||||||| || |||||| Sbjct: 445 atgtccaaacagatgcttccatccgcataaatgtttgggtgaaacatcctcgaaacaaac 386 Query: 440 cgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttgaacgta 499 |||||||| || || |||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 385 cgaacagtcggaggtttgttggggtaatcttctgtaaattgcagagtcagcttgaacgtg 326 Query: 500 cctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgttatgttg 559 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 325 cctccgtcccacggcgtgtcatccggcccgaatatgacggcgttccagagcatgatgttg 266 Query: 560 ttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgcttgaagtc 618 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 265 ttgtcgtgcggcgcgccgctgatgccggcgggcgggtcctgctgcaaccgcttgaagtc 207
>ref|XM_469945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 504 bits (254), Expect = e-139 Identities = 382/425 (89%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 639 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 580 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||||||| ||| |||||||||||||||||| || || || || || || || || || Sbjct: 579 ttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcacag 520 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 519 agcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgattt 460 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 459 tgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttgag 400 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 |||||||||||| |||||| |||||||| ||||||||||| ||||| || ||||||||| Sbjct: 399 acaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagcttg 340 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| | Sbjct: 339 aacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcatg 280 Query: 554 atgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgcttg 613 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 279 atgttgttgtcgtgcggcgcgccgctgattccggcgggcgggtcctgctgcagccgcttg 220 Query: 614 aagtc 618 ||||| Sbjct: 219 aagtc 215
>dbj|AB079798.1| Oryza sativa (japonica cultivar-group) OsRad6 mRNA for Rad6, complete cds Length = 764 Score = 504 bits (254), Expect = e-139 Identities = 382/425 (89%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 632 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 573 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||||||| ||| |||||||||||||||||| || || || || || || || || || Sbjct: 572 ttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcacag 513 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 512 agcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgattt 453 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 452 tgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttgag 393 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 |||||||||||| |||||| |||||||| ||||||||||| ||||| || ||||||||| Sbjct: 392 acaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagcttg 333 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| | Sbjct: 332 aacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcatg 273 Query: 554 atgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgcttg 613 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 272 atgttgttgtcgtgcggcgcgccgctgattccggcgggcgggtcctgctgcagccgcttg 213 Query: 614 aagtc 618 ||||| Sbjct: 212 aagtc 208
>dbj|AK120251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045G10, full insert sequence Length = 847 Score = 504 bits (254), Expect = e-139 Identities = 382/425 (89%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 639 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 580 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||||||| ||| |||||||||||||||||| || || || || || || || || || Sbjct: 579 ttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcacag 520 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 519 agcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgattt 460 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 459 tgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttgag 400 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 |||||||||||| |||||| |||||||| ||||||||||| ||||| || ||||||||| Sbjct: 399 acaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagcttg 340 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| | Sbjct: 339 aacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcatg 280 Query: 554 atgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgcttg 613 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 279 atgttgttgtcgtgcggcgcgccgctgattccggcgggcgggtcctgctgcagccgcttg 220 Query: 614 aagtc 618 ||||| Sbjct: 219 aagtc 215
>dbj|AK067703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J09, full insert sequence Length = 882 Score = 504 bits (254), Expect = e-139 Identities = 382/425 (89%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 625 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 566 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||||||| ||| |||||||||||||||||| || || || || || || || || || Sbjct: 565 ttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcacag 506 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 505 agcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgattt 446 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 445 tgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttgag 386 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 |||||||||||| |||||| |||||||| ||||||||||| ||||| || ||||||||| Sbjct: 385 acaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagcttg 326 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| | Sbjct: 325 aacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcatg 266 Query: 554 atgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgcttg 613 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 265 atgttgttgtcgtgcggcgcgccgctgattccggcgggcgggtcctgctgcagccgcttg 206 Query: 614 aagtc 618 ||||| Sbjct: 205 aagtc 201
>gb|AY103578.1| Zea mays PCO136701 mRNA sequence Length = 1179 Score = 490 bits (247), Expect = e-135 Identities = 381/426 (89%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||| | ||| || || |||||||||||||| ||||| Sbjct: 801 ctagtcggctgtccagctctgctccacaatctcgcggactttgcggttgtactcccgctt 742 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 |||||||||| ||| ||| || ||||| ||||| || || || ||||| || || || || Sbjct: 741 gttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtttggatcaca 682 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 681 cagcagggactggatagaagtcaagattgcagcaacatcatatataggactccactggtt 622 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 |||||||||||||||||||||||||||||| ||||| |||||||| || |||||||| || Sbjct: 621 ctgtaggatatccaagcagatgcttccatcagcatatatgtttggatgaaacatcctaga 562 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||| ||||||||||||||||||||||| |||||||||||||| || |||| ||| ||||| Sbjct: 561 gacgaaccgaacagttggtggcttgtttgggtaatcttctgtaaactgcaaggtaagctt 502 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 |||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 501 gaacgtgcctccgtcccaaggcgtatcatccggcccgaatatgacggcgttccagagcat 442 Query: 553 tatgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgctt 612 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | Sbjct: 441 gatgttgttgtcgtgcggcgcgccgctgatcccggcgggcgggtcctgctgcaggcgcct 382 Query: 613 gaagtc 618 |||||| Sbjct: 381 gaagtc 376
>ref|XM_476729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 466 bits (235), Expect = e-128 Identities = 378/426 (88%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 459 ctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgctt 400 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 |||||| || ||| |||||| ||||| ||||| |||||||| || || || || || || Sbjct: 399 gttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcaca 340 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 339 cagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggtt 280 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 |||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 279 ctgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctaga 220 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 |||||||||||||| || ||||||||||| ||||||||||| || |||| ||| ||||| Sbjct: 219 aacaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagctt 160 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 |||||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||| | Sbjct: 159 gaacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcat 100 Query: 553 tatgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgctt 612 ||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||| Sbjct: 99 gatgttgttgtcgtgcggcgcgccgctgatccccgcgggggggtcctgctgcagccgctt 40 Query: 613 gaagtc 618 |||||| Sbjct: 39 gaagtc 34
>gb|BT016345.1| Zea mays clone Contig178 mRNA sequence Length = 965 Score = 466 bits (235), Expect = e-128 Identities = 378/426 (88%) Strand = Plus / Plus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||| | ||| || || ||||||| | |||| ||||| Sbjct: 356 ctagtcggctgtccagctctgctccacaatctcgcggactttgcggtggaactcccgctt 415 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 |||||||||| ||| ||| || ||||| ||||| || || || ||||| | || || || Sbjct: 416 gttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtctggatcaca 475 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 476 cagcagggactgaatagaagtcaagattgcagcaacatcatatataggactccactggtt 535 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 |||||||||||||||||||||||||||||| ||||| |||||||| || |||||||| || Sbjct: 536 ctgtaggatatccaagcagatgcttccatcagcatatatgtttggatgaaacatcctaga 595 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||| ||||||||||||||||||||||| |||||||||||||| || |||| ||| ||||| Sbjct: 596 gacgaaccgaacagttggtggcttgtttgggtaatcttctgtaaactgcaaggtaagctt 655 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 |||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 656 gaacgtgcctccgtcccaaggcgtatcatccggcccgaatatgacggcgttccagagcat 715 Query: 553 tatgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgctt 612 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 716 gatgttgttgtcgtgcggcgcgccgctgatgccggcgggcgggtcctgctgcaggcgcct 775 Query: 613 gaagtc 618 |||||| Sbjct: 776 gaagtc 781
>dbj|AK121382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H21, full insert sequence Length = 895 Score = 466 bits (235), Expect = e-128 Identities = 378/426 (88%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 614 ctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgctt 555 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 |||||| || ||| |||||| ||||| ||||| |||||||| || || || || || || Sbjct: 554 gttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcaca 495 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 494 cagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggtt 435 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 |||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 434 ctgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctaga 375 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 |||||||||||||| || ||||||||||| ||||||||||| || |||| ||| ||||| Sbjct: 374 aacaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagctt 315 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 |||||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||| | Sbjct: 314 gaacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcat 255 Query: 553 tatgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgctt 612 ||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||| Sbjct: 254 gatgttgttgtcgtgcggcgcgccgctgatccccgcgggggggtcctgctgcagccgctt 195 Query: 613 gaagtc 618 |||||| Sbjct: 194 gaagtc 189
>dbj|AK070524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G02, full insert sequence Length = 4109 Score = 466 bits (235), Expect = e-128 Identities = 378/426 (88%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 570 ctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgctt 511 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 |||||| || ||| |||||| ||||| ||||| |||||||| || || || || || || Sbjct: 510 gttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcaca 451 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 450 cagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggtt 391 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 |||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 390 ctgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctaga 331 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 |||||||||||||| || ||||||||||| ||||||||||| || |||| ||| ||||| Sbjct: 330 aacaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagctt 271 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 |||||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||| | Sbjct: 270 gaacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcat 211 Query: 553 tatgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgctt 612 ||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||| Sbjct: 210 gatgttgttgtcgtgcggcgcgccgctgatccccgcgggggggtcctgctgcagccgctt 151 Query: 613 gaagtc 618 |||||| Sbjct: 150 gaagtc 145
>gb|BT018048.1| Zea mays clone EL01N0531D04.c mRNA sequence Length = 817 Score = 270 bits (136), Expect = 5e-69 Identities = 339/407 (83%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 588 agtccgccgtccagctctgctccacgacctcccgaactttgcggttgtactctcgcttgt 529 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||||||| |||| | ||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 528 tctcgctgaacatgcgggcggcttcagagttagcgggcgaattcgggtttggatcgcaca 469 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 || |||||||| || || | ||| || || ||||||||||| || |||||||| |||| Sbjct: 468 acaatgactggattgacgtgagtatcgcagctacatcatatatcggactccactgattct 409 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 | |||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| || | Sbjct: 408 gcaggatatctaagcatatgcttccatcagcataaatgttaggatggaacatcctagaaa 349 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 |||| || ||||||||||| ||||| || || ||||| | || || || |||||||| | Sbjct: 348 caaatcgcacagttggtggtttgtttggatattcttcattaaactggagagtcagcttaa 289 Query: 495 acgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtta 554 ||||||||||||||||||| || ||||| || || |||||||| || ||||| ||| ||| Sbjct: 288 acgtacctccatcccacggggtatcatcaggtccaaatatgacagcattccacagcatta 229 Query: 555 tgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgc 601 ||||||| || ||||| ||||| || |||||||| | ||||||||| Sbjct: 228 tgttgttatcctgcggggcgccacttatgccggccggagggtcctgc 182
>gb|AY104593.1| Zea mays PCO096181 mRNA sequence Length = 1003 Score = 270 bits (136), Expect = 5e-69 Identities = 339/407 (83%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 674 agtccgccgtccagctctgctccacgacctcccgaactttgcggttgtactctcgcttgt 615 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||||||| |||| | ||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 614 tctcgctgaacatgcgggcggcttcagagttagcgggcgaattcgggtttggatcgcaca 555 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 || |||||||| || || | ||| || || ||||||||||| || |||||||| |||| Sbjct: 554 acaatgactggattgacgtgagtatcgcagctacatcatatatcggactccactgattct 495 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 | |||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| || | Sbjct: 494 gcaggatatctaagcatatgcttccatcagcataaatgttaggatggaacatcctagaaa 435 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 |||| || ||||||||||| ||||| || || ||||| | || || || |||||||| | Sbjct: 434 caaatcgcacagttggtggtttgtttggatattcttcattaaactggagagtcagcttaa 375 Query: 495 acgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtta 554 ||||||||||||||||||| || ||||| || || |||||||| || ||||| ||| ||| Sbjct: 374 acgtacctccatcccacggggtatcatcaggtccaaatatgacagcattccacagcatta 315 Query: 555 tgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgc 601 ||||||| || ||||| ||||| || |||||||| | ||||||||| Sbjct: 314 tgttgttatcctgcggggcgccacttatgccggccggagggtcctgc 268
>ref|NM_202096.1| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.2 mRNA, complete cds Length = 819 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 551 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 492 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 491 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 432 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 431 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 372 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 371 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 312 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 311 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 252 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 251 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 192 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 191 aatgttgttgtc 180
>ref|NM_101307.2| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.1 mRNA, complete cds Length = 948 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 680 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 621 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 620 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 561 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 560 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 501 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 500 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 441 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 440 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 381 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 380 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 321 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 320 aatgttgttgtc 309
>gb|AF332451.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme 1 (At1g14400) mRNA, complete cds Length = 459 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 459 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 400 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 399 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 340 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 339 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 280 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 279 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 220 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 219 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 160 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 159 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 100 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 99 aatgttgttgtc 88
>gb|AY091330.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 1 (UBC1) (At1g14400) mRNA, complete cds Length = 490 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 459 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 400 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 399 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 340 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 339 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 280 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 279 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 220 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 219 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 160 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 159 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 100 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 99 aatgttgttgtc 88
>gb|AY070074.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC1 (At1g14400) mRNA, complete cds Length = 839 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 632 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 573 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 572 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 513 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 512 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 453 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 452 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 393 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 392 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 333 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 332 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 273 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 272 aatgttgttgtc 261
>emb|BX816760.1|CNS0AD3H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 605 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 546 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 545 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 486 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 485 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 426 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 425 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 366 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 365 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 306 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 305 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 246 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 245 aatgttgttgtc 234
>gb|AY085783.1| Arabidopsis thaliana clone 18146 mRNA, complete sequence Length = 838 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 680 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 621 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 620 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 561 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 560 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 501 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 500 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 441 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 440 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 381 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 380 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 321 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 320 aatgttgttgtc 309
>gb|DQ027016.1| Arabidopsis thaliana ubiquitinating enzyme (At1g14400) mRNA, complete cds Length = 459 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 459 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 400 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 399 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 340 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 339 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 280 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 279 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 220 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 219 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 160 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 159 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 100 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 99 aatgttgttgtc 88
>gb|M62721.1|ATHUCP1B Arabidopsis thaliana ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 749 Score = 238 bits (120), Expect = 2e-59 Identities = 309/372 (83%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 558 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 499 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 498 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 439 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||| ||||||||| ||||| | ||| || ||||||||||| || || ||||||||||| Sbjct: 438 gagcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtt 379 Query: 373 ctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttga 432 ||||| || ||||||||||| || ||||||||||| || || || || ||||||| ||| Sbjct: 378 ttgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtga 319 Query: 433 gacaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagctt 492 ||||||||||| |||||||| || ||||| |||||||| | ||| ||||| | || || Sbjct: 318 cacaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagttt 259 Query: 493 gaacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgt 552 ||| |||||||||||||| || |||||||| ||||| |||||||| || ||||||||| | Sbjct: 258 gaaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcat 199 Query: 553 tatgttgttgtc 564 ||||||||||| Sbjct: 198 aatgttgttgtc 187
>emb|BX817066.1|CNS0AD3L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Minus Query: 203 gtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgttctcgctg 262 |||||||| ||||| || || |||||||| | | |||||||||||||||| | |||||| Sbjct: 642 gtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttgctttcgctg 583 Query: 263 tacattctggctgcttcggagttggctggagaattcggattcgggtcgcacagcagggac 322 ||||| | || ||||| ||||| || |||||||||||||| ||||| || |||| |||| Sbjct: 582 tacatccgagcagcttccgagtttgcaggagaattcggattagggtcacagagcaaggac 523 Query: 323 tggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggata 382 ||||| ||||| | ||| || ||||||||||| || || ||||||||||| ||||| || Sbjct: 522 tggatggaggtaagtatagcagcaacatcatagattggactccactggttttgtagaatg 463 Query: 383 tccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccga 442 ||||||||||| || ||||||||||| || || || || ||||||| ||| ||||||||| Sbjct: 462 tccaagcagatactcccatctgcataaatattaggatgaaacatccgtgacacaaaccga 403 Query: 443 acagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttgaacgtacct 502 || |||||||| || ||||| |||||||| | ||| ||||| | || ||||| |||||| Sbjct: 402 actgttggtggtttattgggataatcttcagagaactgcagtgagagtttgaaagtacct 343 Query: 503 ccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgttatgttgttg 562 |||||||| || |||||||| ||||| |||||||| || ||||||||| | ||||||||| Sbjct: 342 ccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcataatgttgttg 283 Query: 563 tc 564 || Sbjct: 282 tc 281
>gb|AF262934.1|AF262934 Avicennia marina ubiquitin conjugating protein (UBC) mRNA, complete cds Length = 850 Score = 220 bits (111), Expect = 4e-54 Identities = 276/331 (83%) Strand = Plus / Minus Query: 234 tgcggttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggag 293 |||| ||||| |||||||||||||| ||| |||| | || ||||| || || || |||| Sbjct: 477 tgcgattgtattcgcgcttgttctcactgaacatccgagcagcttcagaatttgcaggag 418 Query: 294 aattcggattcgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcat 353 |||| ||||||||||| |||| ||| ||||||||||| || | ||| ||||||| |||| Sbjct: 417 aatttggattcgggtcacacaacagtgactggatagacgtaagtatggctgcaatgtcat 358 Query: 354 atatagggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgt 413 ||||||| ||||| ||||| || ||||| |||||||| ||||||||||| ||||| || | Sbjct: 357 atataggactccattggttttgaaggatgtccaagcatatgcttccatccgcataaatat 298 Query: 414 ttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctg 473 ||||||| ||||| || || ||||| ||||| |||||||| ||||| || |||||||||| Sbjct: 297 ttgggtgaaacattctagaaacaaatcgaactgttggtggtttgtttggataatcttctg 238 Query: 474 tgaattgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaata 533 |||| || |||||||| ||||| |||||||||||||| ||||| ||||| || || |||| Sbjct: 237 tgaactgaagggtcagtttgaatgtacctccatcccatggcgtatcatcaggaccaaata 178 Query: 534 tgacggcgttccagagcgttatgttgttgtc 564 | || || ||||||||| | ||||| ||||| Sbjct: 177 taactgcattccagagcataatgttattgtc 147
>gb|AY389584.1| Hyacinthus orientalis ubiquitin-conjugating enzyme (UBC) mRNA, partial cds Length = 691 Score = 212 bits (107), Expect = 1e-51 Identities = 305/371 (82%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||| ||||| | ||| || ||| | ||||||||||| |||||| Sbjct: 448 tagtcagccgtccagctctgttccactatctctcggacccttcggttgtactcacgcttg 389 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||||||| |||| | || || || |||||||| || || || || || ||||| || Sbjct: 388 ttctcgctgaacatccgagcagcctcagagttggccggggagtttgggtttgggtcacag 329 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 || || ||||| ||||| |||| ||| |||||||||||||| || || ||||| |||||| Sbjct: 328 aggagagactgaatagatgtcagtatagctgcaacatcataaatgggactccattggttc 269 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 |||| ||||||| ||| ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 268 tgtaaaatatccaggcatatgctcccatctgcatatatgtttggatgaaacattcttgag 209 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 ||||||||||| ||||||||||| || || ||||| || |||||||||| |||| || Sbjct: 208 acaaaccgaactgttggtggcttattaggataatcctcggtgaattgcaatgtcaattta 149 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 || |||||||||||||| || || ||||| ||||| || || || |||||||||||| | Sbjct: 148 aaggtacctccatcccatggagtatcatcaggcccaaagatcactgcgttccagagcatg 89 Query: 554 atgttgttgtc 564 ||||||||||| Sbjct: 88 atgttgttgtc 78
>emb|AJ879070.1| Capsicum chinense mRNA for ubiquitin-conjugating enzyme Length = 957 Score = 198 bits (100), Expect = 2e-47 Identities = 271/328 (82%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 |||| ||||||||||||||||| || | |||||||||||| | ||||||||||||||||| Sbjct: 671 agtcagctgtccagctctgctcaacaatctcacgcaccttcctgttgtactcgcgcttgt 612 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 ||||||| |||| | |||||||| || || ||||| || || || || || ||||| | Sbjct: 611 tctcgctaaacatgcgcgctgcttctgaattagctggcgagtttgggtttggatcgcaga 552 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 ||| |||||||| || || | ||| || ||||||||||| ||||| |||||||| || | Sbjct: 551 gcaaagactggattgaagtgagtatagccgcaacatcataaataggactccactgatttt 492 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 | || || |||||||| || || ||||| ||||| || ||||| ||||||||||| || | Sbjct: 491 gcagtatgtccaagcaaatactcccatcggcataaatatttggatggaacatcctggaaa 432 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 |||||| || ||||| ||||||||||||||||| || | ||||| || |||||||| | Sbjct: 431 taaaccgcaccgttggaggcttgttggggtaatcctccgaaaattgaagtgtcagcttaa 372 Query: 495 acgtacctccatcccacggcgtgtcatc 522 |||||||||||||||| ||||||||||| Sbjct: 371 acgtacctccatcccaaggcgtgtcatc 344
>emb|BX814055.1|CNS0ADOD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 804 Score = 194 bits (98), Expect = 2e-46 Identities = 296/362 (81%) Strand = Plus / Minus Query: 203 gtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgttctcgctg 262 |||||||| ||||| || || |||||||| | | || ||||||||||||| | |||||| Sbjct: 600 gtccagctttgctcaacaacatcacgcactctcctgtggtactcgcgcttgctttcgctg 541 Query: 263 tacattctggctgcttcggagttggctggagaattcggattcgggtcgcacagcagggac 322 ||||| | || ||||| ||||| || ||||||||||||| |||| || |||| |||| Sbjct: 540 tacatccgagcagcttccgagtttgcaggagaattcggataagggtaacagagcaaggac 481 Query: 323 tggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggata 382 ||||| ||||| | ||| || || |||||||| || || ||||||||||| ||||| || Sbjct: 480 tggatggaggtaagtatagcagctacatcatagattggactccactggttttgtagaatg 421 Query: 383 tccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccga 442 ||||||||||| || ||||||||||| || || || || ||||||| ||| ||||||||| Sbjct: 420 tccaagcagatactcccatctgcataaatattaggatgaaacatccgtgacacaaaccga 361 Query: 443 acagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttgaacgtacct 502 || |||||||| || ||||| |||||||| | ||| ||||| | || ||||| |||||| Sbjct: 360 actgttggtggtttattgggataatcttcagagaactgcagtgagagtttgaaagtacct 301 Query: 503 ccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgttatgttgttg 562 |||||||| || |||||||| ||||| ||||||| || ||||||||| | ||||||||| Sbjct: 300 ccatcccatggtgtgtcatcaggcccaaatatgagagcattccagagcataatgttgttg 241 Query: 563 tc 564 || Sbjct: 240 tc 239
>emb|AJ843121.1| Plantago major mRNA for Ubiquitin-conjugating enzyme (ubc2 gene) Length = 858 Score = 186 bits (94), Expect = 6e-44 Identities = 342/425 (80%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| |||||||| || |||||||| | |||||||||||| | |||||| || |||||| Sbjct: 598 tagtcggctgtccaactttgctccacaatctcacgcaccttcctgttgtaatcacgcttg 539 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 || || ||| ||| | || ||||| ||||| || || ||||| ||||| || || || Sbjct: 538 ttttcactgaacaaccgtgcagcttccgagtttgcaggtgaatttggatttggatcacag 479 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 ||||| ||||||||||| || | |||||| || ||||||||||| || |||||||| || Sbjct: 478 agcagcgactggatagatgtaagtattgcagctacatcatatattggactccactgattt 419 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 || |||||||||||||| || |||||||| ||||| ||||| || |||||||| || || Sbjct: 418 tgcaggatatccaagcaaatacttccatcagcataaatgttgggatggaacattctggat 359 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 | ||| || ||||||||||||||||| ||||| || || | |||||| || |||| ||| Sbjct: 358 ataaatcgcacagttggtggcttgttcgggtagtcctccgagaattgtagagtcaactta 299 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 ||||||||||||||||| || || ||||| || || ||||| || |||||||| | | | Sbjct: 298 aacgtacctccatcccaaggagtatcatccggaccaaatataacagcgttccaaatcata 239 Query: 554 atgttgttgtcgtgcggcgcgccgctgatgccggcggncgggtcctgctgcaggcgcttg 613 || ||||| |||| ||| || |||||||| || || | || |||||||||| |||||| Sbjct: 238 atattgttatcgtacggagcaccgctgattccagccggaggatcctgctgcaaccgcttg 179 Query: 614 aagtc 618 ||||| Sbjct: 178 aagtc 174
>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01, full insert sequence Length = 947 Score = 186 bits (94), Expect = 6e-44 Identities = 301/370 (81%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||| | |||||| || || |||||||| || ||||||| Sbjct: 677 agtccgcggtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgt 618 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| | | | ||| ||||| |||||||| || ||||| || || || ||||| | Sbjct: 617 tctcactgaataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaa 558 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 |||| |||||||| || || | ||| || || ||||||||||| |||||||||||||| | Sbjct: 557 gcagcgactggatggatgtgagtatagcagctacatcatatatggggctccactggtttt 498 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 |||| ||||| ||||| ||||| ||||| ||||| ||||| || || ||||||| || | Sbjct: 497 gtagtatatctaagcatatgctcccatcagcataaatgttaggatgaaacatccgagaaa 438 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 |||| || || || ||||||||||| || |||||||| || || || || |||||||||| Sbjct: 437 caaatcgcactgtaggtggcttgttaggataatcttcagtaaactgaagtgtcagcttga 378 Query: 495 acgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtta 554 |||||||||||||||| || || ||||| || || || || || || ||||| ||| ||| Sbjct: 377 acgtacctccatcccaaggagtatcatcagggccaaaaattacagcattccaaagcatta 318 Query: 555 tgttgttgtc 564 | |||||||| Sbjct: 317 tattgttgtc 308
>gb|BT013884.1| Lycopersicon esculentum clone 132865R, mRNA sequence Length = 794 Score = 178 bits (90), Expect = 1e-41 Identities = 300/370 (81%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| |||||||||||||| || | |||||||||||| | ||||||||| ||||||| Sbjct: 517 agtccgccgtccagctctgctcaacaatctcacgcaccttcctgttgtactcacgcttgt 458 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| |||| | |||||||| || || || || || || || || || || || | Sbjct: 457 tctcactgaacatgcgagctgcttctgaattagcaggcgagtttgggtttggatcacaaa 398 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 ||| |||||||| || || | ||| || ||||| ||||||||||| |||||||| || | Sbjct: 397 gcaaagactggattgaagtgagtatagcagcaacgtcatatataggactccactgatttt 338 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 | || || || ||||| || || ||||| ||||| || || || ||||||||||| || | Sbjct: 337 gcagtatgtctaagcaaatactcccatcggcataaatattcggatggaacatcctggata 278 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 |||| ||||| ||||| ||||||||||||||||| || | ||||| || |||||||| | Sbjct: 277 caaatcgaaccgttggaggcttgttggggtaatcctccgaaaattgaagtgtcagcttaa 218 Query: 495 acgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtta 554 |||||||||||||||| || |||||||| || |||||||| || || ||||| ||| ||| Sbjct: 217 acgtacctccatcccaaggtgtgtcatcaggaccgaatataacagcattccaaagcatta 158 Query: 555 tgttgttgtc 564 | |||||||| Sbjct: 157 tattgttgtc 148
>dbj|AB026056.1| Nicotiana tabacum Ntubc2 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 784 Score = 170 bits (86), Expect = 3e-39 Identities = 317/394 (80%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 |||| |||||||||||||| || || | ||| |||||||| | |||||| |||||||||| Sbjct: 541 agtctgctgtccagctctgttcaacaatctcgcgcaccttcctgttgtattcgcgcttgt 482 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| |||| | |||||||| || || ||||| || || ||||| || || || | Sbjct: 481 tctcactgaacatgcgtgctgcttctgaattagctggcgagttaggatttggatcacaga 422 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 ||| |||||||| || |||| ||| || || ||||||||||| || |||||||| || | Sbjct: 421 gcaaagactggattgaagtcagtatagcagctacatcatatatgggactccactgatttt 362 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 | | ||| |||||||| || |||||||| || || || |||||||||||||| || || | Sbjct: 361 gcaagatgtccaagcaaatacttccatcagcgtaaatatttgggtggaacattctggaaa 302 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 ||| || ||||||||||| ||||| || ||||| |||| |||||| || |||||||| | Sbjct: 301 taaatcgcacagttggtggtttgtttggataatcctctgagaattgaagtgtcagcttaa 242 Query: 495 acgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtta 554 | || ||||||||||| || || ||||| || ||||| ||||| || ||||| ||| ||| Sbjct: 241 atgtgcctccatcccagggagtatcatcaggaccgaaaatgactgcattccatagcatta 182 Query: 555 tgttgttgtcgtgcggcgcgccgctgatgccggc 588 | |||||||| | ||| || || ||||||||||| Sbjct: 181 tattgttgtcatacggagctccactgatgccggc 148
>gb|BT017437.1| Zea mays clone EL01N0404C11.c mRNA sequence Length = 425 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| | |||||||||||||||||||| |||||| || |||||| ||||||| ||||| Sbjct: 191 ctagtcgggtgtccagctctgctccacgatctcacggactttgcgggtgtactcccgctt 132 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 |||||||||| ||| ||| |||||||| ||||| || || || || || || || || || Sbjct: 131 gttctcgctgaacagtcttgctgcttctgagtttgcaggggagtttgggtttggatcaca 72 Query: 313 cagcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggtt 372 |||||||||||||||||| || || ||||| ||||||||||||||||| ||||||||||| Sbjct: 71 cagcagggactggatagaagttaaaattgcagcaacatcatatataggactccactggtt 12 Query: 373 ctg 375 ||| Sbjct: 11 ctg 9
>dbj|AB026055.1| Nicotiana tabacum Ntubc1 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 809 Score = 155 bits (78), Expect = 2e-34 Identities = 315/394 (79%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 |||| |||||||||||||| || || | ||| |||||||| | |||||| || ||||||| Sbjct: 543 agtctgctgtccagctctgttcaacaatctcgcgcaccttcctgttgtattcacgcttgt 484 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| |||| | |||||||| || || ||||| || || ||||| || || || | Sbjct: 483 tctcactgaacatgcgtgctgcttctgaattagctggcgagttgggatttggatcacaga 424 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 ||| |||||||| || |||| ||| || || ||||||||||| || ||||| || || | Sbjct: 423 gcaaagactggattgaagtcagtatagcagctacatcatatatgggactccattgatttt 364 Query: 375 gtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgaga 434 | ||||| |||||||| || |||||||| || || || |||||||||||||| || || | Sbjct: 363 gcaggatgtccaagcaaatacttccatcagcgtaaatatttgggtggaacattctggaaa 304 Query: 435 caaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttga 494 ||| || ||||||||||| ||||| || || || |||| |||||| || |||||||| | Sbjct: 303 taaatcgcacagttggtggtttgtttggatagtcctctgagaattgaagtgtcagcttaa 244 Query: 495 acgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtta 554 | |||||||||||||| || || ||||| || ||||| ||||| || ||||| ||| ||| Sbjct: 243 atgtacctccatcccaaggagtatcatcagggccgaaaatgactgcattccatagcatta 184 Query: 555 tgttgttgtcgtgcggcgcgccgctgatgccggc 588 | |||||||| | || || || ||||||||||| Sbjct: 183 tattgttgtcatatggagctccactgatgccggc 150
>gb|AY660750.1| Populus tomentosa ubiquitin carrier protein mRNA, complete cds Length = 700 Score = 149 bits (75), Expect = 1e-32 Identities = 297/371 (80%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||||| || |||| ||||| || ||||| Sbjct: 652 tagtcagcagtccagctctgctccacaatttcacgaactctgcgattgtattcccgctta 593 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||| ||| |||| | || ||||| ||||| ||||| ||||| || || || || || Sbjct: 592 ttctcactgaacatgcgagcggcttcagagtttgctggggaatttgggtttggatcacag 533 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 |||||||||||||| || || | ||| || |||||||||||||| || |||||||| || Sbjct: 532 agcagggactggatggaagttagtatagcagcaacatcatatatgggactccactgattt 473 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 |||| || || ||||| || |||||||||||||| || ||||| || ||||| | ||| Sbjct: 472 tgtaaaatgtctaagcatatacttccatctgcataaatatttggatgaaacattcgagag 413 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 ||||| || || ||||| || || || || ||||| ||||||||||| || |||| ||| Sbjct: 412 acaaagcggactgttggaggtttatttggataatcctctgtgaattgaagagtcaactta 353 Query: 494 aacgtacctccatcccacggcgtgtcatcgggcccgaatatgacggcgttccagagcgtt 553 ||||| ||||||||||| || || ||||| || || ||||| || |||||||||||| | Sbjct: 352 aacgtccctccatcccaaggagtatcatcaggtccaaatataacagcgttccagagcatg 293 Query: 554 atgttgttgtc 564 ||||||||||| Sbjct: 292 atgttgttgtc 282
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 147 bits (74), Expect = 5e-32 Identities = 88/93 (94%) Strand = Plus / Minus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 112646 cccgaatatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgattcc 112587 Query: 586 ggcggncgggtcctgctgcaggcgcttgaagtc 618 ||||| ||||||||||||||| ||||||||||| Sbjct: 112586 ggcgggcgggtcctgctgcagccgcttgaagtc 112554 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 322 ctggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggat 381 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 116674 ctggatagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggat 116615 Query: 382 atccaagcagatgcttccatctgcata 408 |||||||||||| |||||||||||||| Sbjct: 116614 atccaagcagatacttccatctgcata 116588 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 117274 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 117215 Query: 254 ttctcgctgtacattctggctgcttcggagtt 285 ||||||||| ||| |||||||||||||||||| Sbjct: 117214 ttctcgctgaacagtctggctgcttcggagtt 117183 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 |||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 116465 tttgggtgaaacatccttgagacaaaccgaacaactggtggtttgttgggataatcttct 116406 Query: 473 gtgaattgcagggtcagcttgaacgt 498 || ||||| || |||||||||||||| Sbjct: 116405 gtaaattgtagtgtcagcttgaacgt 116380 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 499 acctccatcccacggcgtgtcatc 522 |||||||||||||||||||||||| Sbjct: 112848 acctccatcccacggcgtgtcatc 112825
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 147 bits (74), Expect = 5e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 32631261 cccgaatatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgattcc 32631320 Query: 586 ggcggncgggtcctgctgcaggcgcttgaagtc 618 ||||| ||||||||||||||| ||||||||||| Sbjct: 32631321 ggcgggcgggtcctgctgcagccgcttgaagtc 32631353 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 322 ctggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggat 381 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 32627233 ctggatagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggat 32627292 Query: 382 atccaagcagatgcttccatctgcata 408 |||||||||||| |||||||||||||| Sbjct: 32627293 atccaagcagatacttccatctgcata 32627319 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 32626633 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 32626692 Query: 254 ttctcgctgtacattctggctgcttcggagtt 285 ||||||||| ||| |||||||||||||||||| Sbjct: 32626693 ttctcgctgaacagtctggctgcttcggagtt 32626724 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 |||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 32627442 tttgggtgaaacatccttgagacaaaccgaacaactggtggtttgttgggataatcttct 32627501 Query: 473 gtgaattgcagggtcagcttgaacgt 498 || ||||| || |||||||||||||| Sbjct: 32627502 gtaaattgtagtgtcagcttgaacgt 32627527 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 499 acctccatcccacggcgtgtcatc 522 |||||||||||||||||||||||| Sbjct: 32631059 acctccatcccacggcgtgtcatc 32631082
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 147 bits (74), Expect = 5e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 32721771 cccgaatatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgattcc 32721830 Query: 586 ggcggncgggtcctgctgcaggcgcttgaagtc 618 ||||| ||||||||||||||| ||||||||||| Sbjct: 32721831 ggcgggcgggtcctgctgcagccgcttgaagtc 32721863 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 322 ctggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggat 381 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 32717743 ctggatagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggat 32717802 Query: 382 atccaagcagatgcttccatctgcata 408 |||||||||||| |||||||||||||| Sbjct: 32717803 atccaagcagatacttccatctgcata 32717829 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 32717143 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 32717202 Query: 254 ttctcgctgtacattctggctgcttcggagtt 285 ||||||||| ||| |||||||||||||||||| Sbjct: 32717203 ttctcgctgaacagtctggctgcttcggagtt 32717234 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 |||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 32717952 tttgggtgaaacatccttgagacaaaccgaacaactggtggtttgttgggataatcttct 32718011 Query: 473 gtgaattgcagggtcagcttgaacgt 498 || ||||| || |||||||||||||| Sbjct: 32718012 gtaaattgtagtgtcagcttgaacgt 32718037 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 499 acctccatcccacggcgtgtcatc 522 |||||||||||||||||||||||| Sbjct: 32721569 acctccatcccacggcgtgtcatc 32721592
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds Length = 910 Score = 137 bits (69), Expect = 5e-29 Identities = 255/317 (80%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| |||||||| ||||||||||| || || ||||| | || |||||||| |||||| Sbjct: 582 tagtcagctgtccaactctgctccacaacttcccgcactctacgattgtactcacgcttg 523 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcac 313 ||||| ||| |||||| || ||||| ||||| || |||||||| || || || || || Sbjct: 522 ttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatcacaa 463 Query: 314 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 373 |||| ||||||||||| || | || || ||||||||||||||||| |||||||| || Sbjct: 462 agcaatgactggatagaagtgagaatcgcagcaacatcatatataggactccactgattt 403 Query: 374 tgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatccttgag 433 || | ||||||| || || |||||||||||||| |||||||| || ||||| | ||| Sbjct: 402 tgcaatatatccagacaaatacttccatctgcataaatgtttggatgaaacattcgggag 343 Query: 434 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 493 ||||| || ||||| ||||||||||| || ||||| || | ||||| ||| ||| ||| Sbjct: 342 acaaatcgtacagtgggtggcttgttcggataatcctcggaaaattgaaggctcaactta 283 Query: 494 aacgtacctccatccca 510 ||||| ||||||||||| Sbjct: 282 aacgtgcctccatccca 266
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 332 gtcaatattgctgcaacatcatatatagggctccactggttctgtaggatatccaagcag 391 |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3622582 gtcaatatggcagcaacatcatatatagggctccactggttctgtagaatatccaagcag 3622641 Query: 392 atgcttccatctgcata 408 ||||||||||||||||| Sbjct: 3622642 atgcttccatctgcata 3622658 Score = 123 bits (62), Expect = 7e-25 Identities = 85/93 (91%) Strand = Plus / Plus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 3625756 cccgaagatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgatccc 3625815 Query: 586 ggcggncgggtcctgctgcaggcgcttgaagtc 618 |||| |||||||||||||| ||||||||||| Sbjct: 3625816 cgcgggggggtcctgctgcagccgcttgaagtc 3625848 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 3621798 ctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgctt 3621857 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggaga 294 |||||| || ||| |||||| ||||| ||||| |||||||| Sbjct: 3621858 gttctcactaaacagtctggcagcttctgagtttgctggaga 3621899 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 ||||||||||||||||| || |||||||||||||| || ||||||||||| ||||||||| Sbjct: 3622782 tttgggtggaacatcctagaaacaaaccgaacagtcggcggcttgttgggataatcttct 3622841 Query: 473 gtgaattgcagggtcagcttgaacgt 498 || || |||| ||| ||||||||||| Sbjct: 3622842 gtaaactgcaaggtaagcttgaacgt 3622867
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 332 gtcaatattgctgcaacatcatatatagggctccactggttctgtaggatatccaagcag 391 |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 91899 gtcaatatggcagcaacatcatatatagggctccactggttctgtagaatatccaagcag 91958 Query: 392 atgcttccatctgcata 408 ||||||||||||||||| Sbjct: 91959 atgcttccatctgcata 91975 Score = 123 bits (62), Expect = 7e-25 Identities = 85/93 (91%) Strand = Plus / Plus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 95073 cccgaagatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgatccc 95132 Query: 586 ggcggncgggtcctgctgcaggcgcttgaagtc 618 |||| |||||||||||||| ||||||||||| Sbjct: 95133 cgcgggggggtcctgctgcagccgcttgaagtc 95165 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 91115 ctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgctt 91174 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggaga 294 |||||| || ||| |||||| ||||| ||||| |||||||| Sbjct: 91175 gttctcactaaacagtctggcagcttctgagtttgctggaga 91216 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 ||||||||||||||||| || |||||||||||||| || ||||||||||| ||||||||| Sbjct: 92099 tttgggtggaacatcctagaaacaaaccgaacagtcggcggcttgttgggataatcttct 92158 Query: 473 gtgaattgcagggtcagcttgaacgt 498 || || |||| ||| ||||||||||| Sbjct: 92159 gtaaactgcaaggtaagcttgaacgt 92184
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 332 gtcaatattgctgcaacatcatatatagggctccactggttctgtaggatatccaagcag 391 |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 160532 gtcaatatggcagcaacatcatatatagggctccactggttctgtagaatatccaagcag 160591 Query: 392 atgcttccatctgcata 408 ||||||||||||||||| Sbjct: 160592 atgcttccatctgcata 160608 Score = 123 bits (62), Expect = 7e-25 Identities = 85/93 (91%) Strand = Plus / Plus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 163706 cccgaagatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgatccc 163765 Query: 586 ggcggncgggtcctgctgcaggcgcttgaagtc 618 |||| |||||||||||||| ||||||||||| Sbjct: 163766 cgcgggggggtcctgctgcagccgcttgaagtc 163798 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 159748 ctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgctt 159807 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggaga 294 |||||| || ||| |||||| ||||| ||||| |||||||| Sbjct: 159808 gttctcactaaacagtctggcagcttctgagtttgctggaga 159849 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 ||||||||||||||||| || |||||||||||||| || ||||||||||| ||||||||| Sbjct: 160732 tttgggtggaacatcctagaaacaaaccgaacagtcggcggcttgttgggataatcttct 160791 Query: 473 gtgaattgcagggtcagcttgaacgt 498 || || |||| ||| ||||||||||| Sbjct: 160792 gtaaactgcaaggtaagcttgaacgt 160817
>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full insert sequence Length = 2920 Score = 123 bits (62), Expect = 7e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||| | |||||| || || |||||||| || ||||||| Sbjct: 2663 agtccgcggtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgt 2604 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| | | | ||| ||||| |||||||| || ||||| || || || ||||| | Sbjct: 2603 tctcactgaataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaa 2544 Query: 315 gcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttct 374 |||| |||||||| || || | ||| || || ||||||||||| |||||||||||||| | Sbjct: 2543 gcagcgactggatggatgtgagtatagcagctacatcatatatggggctccactggtttt 2484 Query: 375 gtaggatatccaagcagatgcttccatctgcata 408 |||| ||||| ||||| ||||| ||||| ||||| Sbjct: 2483 gtagtatatctaagcatatgctcccatcagcata 2450 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 449 ggtggcttgttggggtaatcttctgtgaattgcagggtcagcttgaacgtacctccatcc 508 ||||||||||| || |||||||| || || || || |||||||||||||||||||||||| Sbjct: 444 ggtggcttgttaggataatcttcagtaaactgaagtgtcagcttgaacgtacctccatcc 385 Query: 509 cacggcgtgtcatcgggcccgaatatgacggcgttccagagcgttatgttgttgtc 564 || || || ||||| || || || || || || ||||| ||| |||| |||||||| Sbjct: 384 caaggagtatcatcagggccaaaaattacagcattccaaagcattatattgttgtc 329
>ref|NM_126331.2| Arabidopsis thaliana ATUBC2; ubiquitin conjugating enzyme AT2G02760 (ATUBC2) mRNA, complete cds Length = 860 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Minus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 593 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 534 Query: 298 cggattcgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatat 357 |||||| || || || |||| ||||| || ||||| | ||| || || ||||| ||||| Sbjct: 533 cggattaggatcacatagcaatgactgaatggaggttagtatagcagcgacatcgtatat 474 Query: 358 agggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgg 417 || ||||| ||||| || || || |||||||| || || ||||| ||||| |||||||| Sbjct: 473 tggactccattggttttggagaatgtccaagcatatactcccatcagcataaatgtttgg 414 Query: 418 gtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaa 477 |||||||||| ||| |||||||| || |||||||| || || || |||||||| | || Sbjct: 413 atggaacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttccgaaaa 354 Query: 478 ttgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaatat 534 ||||| | || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 353 ctgcagtgacaatttgaaagtacctccatcccaaggggtatcatcaggcccgaatat 297
>ref|NM_125648.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G62540 mRNA, complete cds Length = 877 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 563 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 504 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 503 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 444 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 443 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 403
>gb|AY143805.1| Arabidopsis thaliana At5g62540/K19B1_15 mRNA, complete cds Length = 441 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 293 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 234 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 233 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 174 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 173 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 133
>emb|Y13031.1|ATUBC2 A.thaliana mRNA for ubiquitin conjugating enzyme UBC2 Length = 824 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Minus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 539 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 480 Query: 298 cggattcgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatat 357 |||||| || || || |||| ||||| || ||||| | ||| || || ||||| ||||| Sbjct: 479 cggattaggatcacatagcaatgactgaatggaggttagtatagcagcgacatcgtatat 420 Query: 358 agggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgg 417 || ||||| ||||| || || || |||||||| || || ||||| ||||| |||||||| Sbjct: 419 tggactccattggttttggagaatgtccaagcatatactcccatcagcataaatgtttgg 360 Query: 418 gtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaa 477 |||||||||| ||| |||||||| || |||||||| || || || |||||||| | || Sbjct: 359 atggaacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttccgaaaa 300 Query: 478 ttgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaatat 534 ||||| | || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 299 ctgcagtgacaatttgaaagtacctccatcccaaggggtatcatcaggcccgaatat 243
>gb|AY072479.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 538 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Minus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 414 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 355 Query: 298 cggattcgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatat 357 |||||| || || || |||| ||||| || ||||| | ||| || || ||||| ||||| Sbjct: 354 cggattaggatcacatagcaatgactgaatggaggttagtatagcagcgacatcgtatat 295 Query: 358 agggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgg 417 || ||||| ||||| || || || |||||||| || || ||||| ||||| |||||||| Sbjct: 294 tggactccattggttttggagaatgtccaagcatatactcccatcagcataaatgtttgg 235 Query: 418 gtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaa 477 |||||||||| ||| |||||||| || |||||||| || || || |||||||| | || Sbjct: 234 atggaacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttccgaaaa 175 Query: 478 ttgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaatat 534 ||||| | || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 174 ctgcagtgacaatttgaaagtacctccatcccaaggggtatcatcaggcccgaatat 118
>gb|AY048267.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 819 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 563 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 504 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 503 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 444 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 443 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 403
>gb|AY039851.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 716 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 407 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 348 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 347 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 288 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 287 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 247
>gb|AF370558.1|AF370558 Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 830 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Minus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 563 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 504 Query: 298 cggattcgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatat 357 |||||| || || || |||| ||||| || ||||| | ||| || || ||||| ||||| Sbjct: 503 cggattaggatcacatagcaatgactgaatggaggttagtatagcagcgacatcgtatat 444 Query: 358 agggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgg 417 || ||||| ||||| || || || |||||||| || || ||||| ||||| |||||||| Sbjct: 443 tggactccattggttttggagaatgtccaagcatatactcccatcagcataaatgtttgg 384 Query: 418 gtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaa 477 |||||||||| ||| |||||||| || |||||||| || || || |||||||| | || Sbjct: 383 atggaacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttccgaaaa 324 Query: 478 ttgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaatat 534 ||||| | || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 323 ctgcagtgacaatttgaaagtacctccatcccaaggggtatcatcaggcccgaatat 267
>emb|BX833570.1|CNS09ZB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 480 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 421 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 420 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 361 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 360 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 320
>emb|BX832888.1|CNS09YZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 693 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 379 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 320 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 319 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 260 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 259 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 219
>emb|BX833841.1|CNS09YNI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL7ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 381 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 322 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 321 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 262 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 261 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 221
>gb|AY085367.1| Arabidopsis thaliana clone 148141 mRNA, complete sequence Length = 682 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 405 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 346 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 345 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 286 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 285 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 245
>gb|DQ027018.1| Arabidopsis thaliana ubiquitinating enzyme (At5g62540) mRNA, complete cds Length = 453 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttggg 418 |||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 293 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 234 Query: 419 tggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaat 478 || ||||||| ||| |||||||||||| | || || ||||| || ||||| || ||||| Sbjct: 233 tgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcctcggtgaag 174 Query: 479 tgcagggtcagcttgaacgtacctccatcccacggcgtgtc 519 || || |||| |||||| |||||||||||||| || ||||| Sbjct: 173 tgaagagtcaacttgaaagtacctccatcccatggagtgtc 133
>gb|DQ027017.1| Arabidopsis thaliana ubiquitinating enzyme (At2g02760) mRNA, complete cds Length = 459 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Minus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 414 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 355 Query: 298 cggattcgggtcgcacagcagggactggatagaggtcaatattgctgcaacatcatatat 357 |||||| || || || |||| ||||| || ||||| | ||| || || ||||| ||||| Sbjct: 354 cggattaggatcacatagcaatgactgaatggaggttagtatagcagcgacatcgtatat 295 Query: 358 agggctccactggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgg 417 || ||||| ||||| || || || |||||||| || || ||||| ||||| |||||||| Sbjct: 294 tggactccattggttttggagaatgtccaagcatatactcccatcagcataaatgtttgg 235 Query: 418 gtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaa 477 |||||||||| ||| |||||||| || |||||||| || || || |||||||| | || Sbjct: 234 atggaacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttccgaaaa 175 Query: 478 ttgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggcccgaatat 534 ||||| | || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 174 ctgcagtgacaatttgaaagtacctccatcccaaggggtatcatcaggcccgaatat 118
>gb|DQ294271.1| Solanum tuberosum clone 147C03 ubiquitin carrier-like protein mRNA, complete cds Length = 788 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Minus Query: 344 gcaacatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatct 403 ||||||||||| || || ||||| || ||||| || |||||||| || || |||||||| Sbjct: 378 gcaacatcataaattggactccattgattctgaagaatatccaaacatatacttccatcc 319 Query: 404 gcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttgggg 463 ||||| || || || || ||||| | || |||||||| || || |||||||| |||||| Sbjct: 318 gcataaatattaggatgaaacattcgagaaacaaaccgcacggtgggtggcttattgggg 259 Query: 464 taatcttctgtgaattgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcg 523 ||||| || | |||||| || |||| |||||||||||| |||||||| || |||||||| Sbjct: 258 taatcctcagagaattgaagagtcaacttgaacgtaccaccatcccaaggagtgtcatca 199 Query: 524 ggcccgaatatgacggcgttccagagcgttatgttgttgtc 564 || || ||||| ||||| ||||| ||| | ||||||||||| Sbjct: 198 ggaccaaatatcacggcattccaaagcataatgttgttgtc 158
>ref|XM_469944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| || ||||||||||||||||| | ||| || || ||||||||||||||||||||| Sbjct: 3506 tagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgcttg 3565 Query: 254 ttctcgctgtacattctggctgcttcggagtt 285 ||||||||| ||| |||||||||||||||||| Sbjct: 3566 ttctcgctgaacagtctggctgcttcggagtt 3597
>gb|DQ191625.1| Solanum tuberosum unknown mRNA Length = 791 Score = 105 bits (53), Expect = 2e-19 Identities = 179/221 (80%) Strand = Plus / Minus Query: 344 gcaacatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatct 403 ||||||||||| || || ||||| || ||||| || |||||||| || || |||||||| Sbjct: 377 gcaacatcataaattggactccattgattctgaagaatatccaaacatatacttccatcc 318 Query: 404 gcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttgggg 463 ||||| || || || || ||||| | || |||||||| || || | |||||| |||||| Sbjct: 317 gcataaatattaggatgaaacattcgagaaacaaaccgcacggtggatggcttattgggg 258 Query: 464 taatcttctgtgaattgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcg 523 ||||| || | |||||| || |||| |||||||||||| |||||||| || |||||||| Sbjct: 257 taatcctcagagaattgaagagtcaacttgaacgtaccaccatcccaaggagtgtcatca 198 Query: 524 ggcccgaatatgacggcgttccagagcgttatgttgttgtc 564 || || ||||| ||||| ||||| ||| | ||||||||||| Sbjct: 197 ggaccaaatatcacggcattccaaagcataatgttgttgtc 157
>emb|AJ234842.1|HVU234842 Hordeum vulgare genomic DNA fragment; clone MWG2217 Length = 402 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 526 cccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 75 cccgaagatgacggcgttccagagcatgatgttgttgtcgtgcggcgcgccgctgatccc 16 Query: 586 ggcgg 590 ||||| Sbjct: 15 ggcgg 11
>gb|DQ200366.1| Solanum tuberosum clone 055E08 ubiquitin-conjugating enzyme-like protein mRNA, complete cds Length = 807 Score = 93.7 bits (47), Expect = 7e-16 Identities = 191/239 (79%) Strand = Plus / Minus Query: 347 acatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgca 406 |||||||||||||| |||||||| || || | ||| ||||| || || |||||||| ||| Sbjct: 380 acatcatatataggactccactgattttgcaagatgtccaaacaaatacttccatcagca 321 Query: 407 tagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaa 466 || || ||||| |||||||| || |||||||| | || |||| |||||||| || ||| Sbjct: 320 taaatatttggatggaacattctggagacaaagtgtacttttggcggcttgttaggataa 261 Query: 467 tcttctgtgaattgcagggtcagcttgaacgtacctccatcccacggcgtgtcatcgggc 526 || |||| ||||| || |||| ||| ||||||||||||||||| | || ||||| || Sbjct: 260 tcctctgaaaattgaagtgtcatcttaaacgtacctccatcccaggcagtatcatcagga 201 Query: 527 ccgaatatgacggcgttccagagcgttatgttgttgtcgtgcggcgcgccgctgatgcc 585 |||||||| || || ||||| | | |||| ||| |||| || || || ||||||||||| Sbjct: 200 ccgaatataacagcattccataacattatattgctgtcatgaggtgcaccgctgatgcc 142 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 |||| ||||||||||| ||||| || | ||||||||||| | |||||| |||||||||| Sbjct: 532 agtctgctgtccagctttgctcaactatttcacgcaccttcctgttgtagtcgcgcttgt 473 Query: 255 tctcgct 261 ||||||| Sbjct: 472 tctcgct 466
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 79.8 bits (40), Expect = 1e-11 Identities = 109/132 (82%) Strand = Plus / Plus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 58373 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 58432 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 58433 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 58492 Query: 313 cagcagggactg 324 |||| |||||| Sbjct: 58493 gagcaaggactg 58504 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 322 ctggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggat 381 |||||| ||||| | ||| || ||||||||||| || || ||||||||||| ||||| || Sbjct: 58597 ctggatggaggtaagtatagcagcaacatcatagattggactccactggttttgtagaat 58656 Query: 382 atccaagcagatgcttccatctgcata 408 ||||||||||| || ||||||||||| Sbjct: 58657 gtccaagcagatactcccatctgcata 58683 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 422 aacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttc 471 ||||||| ||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 58794 aacatccgtgacacaaaccgaactgttggtggtttattgggataatcttc 58843
>gb|L19351.1|ATHUBIQUA Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC1) gene, complete cds Length = 1887 Score = 79.8 bits (40), Expect = 1e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 193 ctagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgctt 252 |||||| || |||||||| ||||| || || |||||||| | | ||||||||||||||| Sbjct: 1709 ctagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgctt 1650 Query: 253 gttctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgca 312 | | ||||||||||| | || ||||| ||||| || |||||||||||||| ||||| || Sbjct: 1649 gctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcaca 1590 Query: 313 cagcagggactg 324 |||| |||||| Sbjct: 1589 gagcaaggactg 1578 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 322 ctggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggat 381 |||||| ||||| | ||| || ||||||||||| || || ||||||||||| ||||| || Sbjct: 1485 ctggatggaggtaagtatagcagcaacatcatagattggactccactggttttgtagaat 1426 Query: 382 atccaagcagatgcttccatctgcata 408 ||||||||||| || ||||||||||| Sbjct: 1425 gtccaagcagatactcccatctgcata 1399 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 422 aacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttc 471 ||||||| ||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1288 aacatccgtgacacaaaccgaactgttggtggtttattgggataatcttc 1239
>gb|AY190722.1| Pagrus major ubiquitin-conjugating enzyme E2A mRNA, complete cds Length = 592 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 371 ttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcctt 430 ||||||||||| ||||| || || |||||||||||||||| ||||| || |||||| || Sbjct: 400 ttctgtaggatgtccaaacatatacttccatctgcatagacatttggatgaaacatcttt 341 Query: 431 gagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaa 477 || ||||| || || || || || ||||||||||| ||||||||||| Sbjct: 340 gacacaaatcgtactgtggggggtttgttggggtattcttctgtgaa 294
>ref|XM_790883.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC591316), mRNA Length = 426 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 338 attgctgcaacatcatatatagggctccactggttctgtaggatatccaagcagatgctt 397 ||||||| ||||||||| |||| ||||| |||||||| |||||||||||||| | | Sbjct: 275 attgctgatacatcatatgtaggactccatctattctgtagaatatccaagcagattcct 216 Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||| ||||| | || ||||| |||||| |||| ||||| || || || ||||| ||| Sbjct: 215 ccatcagcatatacattagggtgaaacatctttgatacaaagcgtactgtaggtggtttg 156 Query: 458 ttggggtaatcttctgtgaattgcagggtcagcttgaacgt 498 |||||||| |||||||| || | | ||| ||||||||||| Sbjct: 155 ttggggtactcttctgtaaactcaatggttagcttgaacgt 115
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||| | |||||| || || |||||||| || ||||||| Sbjct: 1543 agtccgcggtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgt 1484 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| | | | ||| ||||| |||||||| || ||||| || || || ||||| | Sbjct: 1483 tctcactgaataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaa 1424 Query: 315 gcagggactgga 326 |||| ||||||| Sbjct: 1423 gcagcgactgga 1412 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 347 acatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgca 406 ||||||||||| |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 593 acatcatatatggggctccactggttttgtagtatatctaagcatatgctcccatcagca 534 Query: 407 ta 408 || Sbjct: 533 ta 532
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||| | |||||| || || |||||||| || ||||||| Sbjct: 4906958 agtccgcggtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgt 4906899 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| | | | ||| ||||| |||||||| || ||||| || || || ||||| | Sbjct: 4906898 tctcactgaataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaa 4906839 Query: 315 gcagggactgga 326 |||| ||||||| Sbjct: 4906838 gcagcgactgga 4906827 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 347 acatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgca 406 ||||||||||| |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 4906008 acatcatatatggggctccactggttttgtagtatatctaagcatatgctcccatcagca 4905949 Query: 407 ta 408 || Sbjct: 4905948 ta 4905947 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 449 ggtggcttgttggggtaatcttctgtgaattgcagggtcagcttgaacgtacct 502 ||||||||||| || |||||||| || || || || |||||||||||||||||| Sbjct: 4903941 ggtggcttgttaggataatcttcagtaaactgaagtgtcagcttgaacgtacct 4903888
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 195 agtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttgt 254 ||||||| ||||||||||||||||| | |||||| || || |||||||| || ||||||| Sbjct: 179366 agtccgcggtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgt 179307 Query: 255 tctcgctgtacattctggctgcttcggagttggctggagaattcggattcgggtcgcaca 314 |||| ||| | | | ||| ||||| |||||||| || ||||| || || || ||||| | Sbjct: 179306 tctcactgaataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaa 179247 Query: 315 gcagggactgga 326 |||| ||||||| Sbjct: 179246 gcagcgactgga 179235 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 347 acatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgca 406 ||||||||||| |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 178416 acatcatatatggggctccactggttttgtagtatatctaagcatatgctcccatcagca 178357 Query: 407 ta 408 || Sbjct: 178356 ta 178355 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 449 ggtggcttgttggggtaatcttctgtgaattgcagggtcagcttgaacgtacct 502 ||||||||||| || |||||||| || || || || |||||||||||||||||| Sbjct: 176349 ggtggcttgttaggataatcttcagtaaactgaagtgtcagcttgaacgtacct 176296
>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123, complete sequence Length = 79601 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| |||||||| ||||||||||| | || | ||| ||||||||||||| |||||| Sbjct: 11167 tagtctgctgtccaactctgctccacaatttccctcactctgcggttgtactcacgcttg 11226 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggaga 294 ||||| || |||||| |||||||||||||| || ||||| Sbjct: 11227 ttctcactaaacattcgagctgcttcggagtttgcaggaga 11267 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 322 ctggatagaggtcaatattgctgcaacatcatatatagggctccactggttctgtaggat 381 ||||||||| || | ||| || || |||||||||||||| |||||||| || |||| || Sbjct: 15376 ctggatagatgtgagtatagcagctacatcatatataggactccactgattttgtaatat 15435 Query: 382 atccaagcagatgcttccatctgc 405 |||||| || || ||||||||||| Sbjct: 15436 atccaaacaaatacttccatctgc 15459
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 194 tagtccgctgtccagctctgctccacgacctcacgcaccttgcggttgtactcgcgcttg 253 ||||| |||||||| ||||||||||| || || ||||| | || |||||||| |||||| Sbjct: 100857 tagtcagctgtccaactctgctccacaacttcccgcactcttcgattgtactcacgcttg 100798 Query: 254 ttctcgctgtacattctggctgcttcggagttggctggagaatt 297 ||||| ||| |||||| || ||||| ||||| || |||||||| Sbjct: 100797 ttctcactgaacattcgagccgcttcagagtttgcaggagaatt 100754 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 344 gcaacatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatct 403 |||||||| |||||||| |||||||| || || | ||||||| || || ||||||||| Sbjct: 98752 gcaacatcgtatataggactccactgattttgcaatatatccagacaaatacttccatct 98693 Query: 404 gcata 408 ||||| Sbjct: 98692 gcata 98688
>gb|BC026053.1| Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:13793 IMAGE:4012075), complete cds Length = 1744 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 401 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 342 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 341 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 291
>gb|AF089812.1| Mus musculus ubiquitin-conjugating enzyme HR6A mRNA, complete cds Length = 1647 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 411 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 352 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 351 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 301
>ref|NM_019668.2| Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA Length = 1744 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 401 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 342 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 341 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 291
>dbj|AK133723.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430434L20 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1665 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 412 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 353 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 352 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 302
>dbj|AK150417.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007D01 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 386 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 327 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 326 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 276
>dbj|AK153327.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830138O09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 386 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 327 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 326 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 276
>gb|AF383148.1|AF383148 Mus musculus ubiquitin-conjugating enzyme HR6A mRNA, complete cds Length = 1647 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 411 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 352 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 351 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 301
>dbj|AK164074.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430050D09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1664 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 412 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 353 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 352 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 302
>dbj|AK160545.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410024M07 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 697 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 410 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 351 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 350 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 300
>dbj|AK160538.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410013I09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 688 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 412 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 353 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 352 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 302
>dbj|AK160527.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400007G23 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1652 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| || ||||||||| Sbjct: 398 ggttctgaagtatatccagacatatactaccatctgcatagacgttaggatggaacatct 339 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | |||||||| | |||||| |||||||| || || || ||||| ||||||| Sbjct: 338 tagagacaaatctaacagtaggtggcttattaggatactcttcagtgaatt 288
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcata 408 |||||||||||||| || | |||||||||||| ||||||||||| ||||| Sbjct: 44936 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcata 44887 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 411 tgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatctt 470 ||||||| || ||||||| ||| |||||||||||| | || || ||||| || ||||| | Sbjct: 44805 tgtttggatgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcct 44746 Query: 471 ctgtgaattgcagggtcagcttgaacgtacct 502 | ||||| || || |||| |||||| |||||| Sbjct: 44745 cggtgaagtgaagagtcaacttgaaagtacct 44714
>gb|L19352.1|ATHUBIQUB Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC3) gene, complete cds and flanking regions Length = 2342 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagcagatgcttccatctgcata 408 |||||||||||||| || | |||||||||||| ||||||||||| ||||| Sbjct: 1669 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcata 1620 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 411 tgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatctt 470 ||||||| || ||||||| ||| |||||||||||| | || || ||||| || ||||| | Sbjct: 1538 tgtttggatgaaacatccgtgaaacaaaccgaacaatcgggggtttgttcggataatcct 1479 Query: 471 ctgtgaattgcagggtcagcttgaacgtacct 502 | ||||| || || |||| |||||| |||||| Sbjct: 1478 cggtgaagtgaagagtcaacttgaaagtacct 1447
>ref|XM_864331.1| PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1 (UBE2A), mRNA Length = 459 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 392 atgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggt 451 ||||| ||||||||||||| ||||| ||||||||| | |||||||| | ||| |||||| Sbjct: 260 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 201 Query: 452 ggctt 456 ||||| Sbjct: 200 ggctt 196
>gb|AF419316.1|AF419316 Bos taurus RAD6-like protein HR6A (BHR6A) mRNA, partial cds Length = 372 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 392 atgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggt 451 ||||| ||||||||||||| ||||| ||||||||| | |||||||| | ||| |||||| Sbjct: 230 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 171 Query: 452 ggctt 456 ||||| Sbjct: 170 ggctt 166
>gb|BC102100.1| Bos taurus cDNA clone MGC:127256 IMAGE:7946441, complete cds Length = 1441 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 392 atgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggt 451 ||||| ||||||||||||| ||||| ||||||||| | |||||||| | ||| |||||| Sbjct: 401 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 342 Query: 452 ggctt 456 ||||| Sbjct: 341 ggctt 337
>gb|AF132075.1|AF132075 Bos taurus RAD6 homolog (BHR6A) gene, partial cds Length = 372 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 392 atgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggt 451 ||||| ||||||||||||| ||||| ||||||||| | |||||||| | ||| |||||| Sbjct: 230 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 171 Query: 452 ggctt 456 ||||| Sbjct: 170 ggctt 166
>gb|AF132074.1|AF132074 Equus caballus RAD6 homolog (EHR6A) gene, partial cds Length = 378 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 392 atgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggt 451 ||||| ||||||||||||| ||||| ||||||||| | |||||||| | ||| |||||| Sbjct: 233 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 174 Query: 452 ggctt 456 ||||| Sbjct: 173 ggctt 169
>gb|AF132073.1|AF132073 Sus scrofa RAD6 homolog (PHR6A) gene, partial cds Length = 378 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 392 atgcttccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggt 451 ||||| ||||||||||||| ||||| ||||||||| | |||||||| | ||| |||||| Sbjct: 233 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 174 Query: 452 ggctt 456 ||||| Sbjct: 173 ggctt 169
>ref|NM_001013933.1| Rattus norvegicus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA Length = 1737 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| |||||||||||| Sbjct: 451 ggttctgaagtatatccagacatatactaccatctgcatagacgttagggtggaacatct 392 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | || ||||| | |||||| ||||| || || || || ||||| ||||||| Sbjct: 391 tagacacaaatctaacagtaggtggtttatttggatattcttcagtgaatt 341
>gb|BC079353.1| Rattus norvegicus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:94810 IMAGE:7108236), complete cds Length = 1737 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Minus Query: 369 ggttctgtaggatatccaagcagatgcttccatctgcatagatgtttgggtggaacatcc 428 ||||||| || ||||||| || || || ||||||||||||| ||| |||||||||||| Sbjct: 451 ggttctgaagtatatccagacatatactaccatctgcatagacgttagggtggaacatct 392 Query: 429 ttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtgaatt 479 | || ||||| | |||||| ||||| || || || || ||||| ||||||| Sbjct: 391 tagacacaaatctaacagtaggtggtttatttggatattcttcagtgaatt 341
>ref|NM_204865.1| Gallus gallus ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), mRNA Length = 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| || ||||| | |||||||| | |||||| |||||||| Sbjct: 254 ccatctgcatagacatttggatgaaacattttagagacaaatctaacagtaggtggctta 195 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||||||||||| Sbjct: 194 tttggatattcttctgtgaatt 173 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 521 tcgggcccgaatatgacggcgttcca 546 ||||||||||| |||||||||||||| Sbjct: 131 tcgggcccgaagatgacggcgttcca 106
>gb|AF120212.1|AF120212 Gallus gallus ubiquitin-conjugating enzyme mRNA, complete cds Length = 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| || ||||| | |||||||| | |||||| |||||||| Sbjct: 254 ccatctgcatagacatttggatgaaacattttagagacaaatctaacagtaggtggctta 195 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||||||||||| Sbjct: 194 tttggatattcttctgtgaatt 173 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 521 tcgggcccgaatatgacggcgttcca 546 ||||||||||| |||||||||||||| Sbjct: 131 tcgggcccgaagatgacggcgttcca 106
>ref|XM_960844.1| Encephalitozoon cuniculi GB-M1 ubiquitin-conjugating enzyme E2 (ECU01_1010) partial mRNA Length = 651 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 407 tagatgtttgggtggaacatccttgagacaaac 439 ||||||||||||||||||||| |||| |||||| Sbjct: 341 tagatgtttgggtggaacatctttgaaacaaac 309
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 407 tagatgtttgggtggaacatccttgagacaaac 439 ||||||||||||||||||||| |||| |||||| Sbjct: 117541 tagatgtttgggtggaacatctttgaaacaaac 117573
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 447 ttggtggcttgttggggtaatcttctgtgaat 478 |||||||||||| ||||||||| ||||||||| Sbjct: 715392 ttggtggcttgtcggggtaatcgtctgtgaat 715361
>gb|AC087606.2| Trypanosoma brucei chromosome 4 clone RPCI93-4J6, complete sequence Length = 37931 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 447 ttggtggcttgttggggtaatcttctgtgaat 478 |||||||||||| ||||||||| ||||||||| Sbjct: 14113 ttggtggcttgtcggggtaatcgtctgtgaat 14082
>gb|AC079933.3| Trypanosoma brucei chromosome 4 clone RPCI93-1H19, complete sequence Length = 171392 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 447 ttggtggcttgttggggtaatcttctgtgaat 478 |||||||||||| ||||||||| ||||||||| Sbjct: 167889 ttggtggcttgtcggggtaatcgtctgtgaat 167858
>gb|BC044416.1| Danio rerio zgc:55512, mRNA (cDNA clone MGC:55512 IMAGE:2641752), complete cds Length = 1571 Score = 48.1 bits (24), Expect = 0.035 Identities = 105/132 (79%) Strand = Plus / Minus Query: 346 aacatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgc 405 ||||||||| |||| ||||| | ||||| || ||||| | |||||| || ||||| || Sbjct: 400 aacatcataagtaggactccatcgattctgaagaatatctaggcagatactgccatcagc 341 Query: 406 atagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggta 465 ||| | ||||| || |||||| ||||||| |||| || ||||| ||||||||||| || Sbjct: 340 atacacatttggatgaaacatctttgagacgaacctcactgttggaggcttgttgggata 281 Query: 466 atcttctgtgaa 477 || |||||||| Sbjct: 280 ttcctctgtgaa 269
>ref|NM_199719.1| Danio rerio zgc:55512 (zgc:55512), mRNA Length = 1571 Score = 48.1 bits (24), Expect = 0.035 Identities = 105/132 (79%) Strand = Plus / Minus Query: 346 aacatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgc 405 ||||||||| |||| ||||| | ||||| || ||||| | |||||| || ||||| || Sbjct: 400 aacatcataagtaggactccatcgattctgaagaatatctaggcagatactgccatcagc 341 Query: 406 atagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggta 465 ||| | ||||| || |||||| ||||||| |||| || ||||| ||||||||||| || Sbjct: 340 atacacatttggatgaaacatctttgagacgaacctcactgttggaggcttgttgggata 281 Query: 466 atcttctgtgaa 477 || |||||||| Sbjct: 280 ttcctctgtgaa 269
>ref|XM_820139.1| Trypanosoma brucei TREU927 clone RPCI93-1H19 ubiquitin-conjugating enzyme E2 (Tb927.4.2710) partial mRNA Length = 477 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 447 ttggtggcttgttggggtaatcttctgtgaat 478 |||||||||||| ||||||||| ||||||||| Sbjct: 235 ttggtggcttgtcggggtaatcgtctgtgaat 204
>ref|XM_783067.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC583142), partial mRNA Length = 256 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 416 gggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttctgtg 475 ||||| |||||| |||| ||||| || || || ||||| ||||||||||| |||||||| Sbjct: 251 gggtgaaacatctttgatacaaagcgtactgtaggtggtttgttggggtactcttctgta 192 Query: 476 aattgcagggtcagcttgaacgt 498 || | | ||| ||||||||||| Sbjct: 191 aactcaatggttagcttgaacgt 169
>gb|BC042021.1| Homo sapiens cDNA clone IMAGE:5312200 Length = 2679 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| ||||||||| | |||||||| | ||| || ||||| || Sbjct: 1276 ccatctgcatagacatttggatggaacatcttagagacaaatctaactgtaggtggttta 1217 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||| ||||||| Sbjct: 1216 tttggatattcttcagtgaatt 1195
>gb|BC010175.2| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1, mRNA (cDNA clone MGC:20175 IMAGE:3051041), complete cds Length = 728 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| ||||||||| | |||||||| | ||| || ||||| || Sbjct: 392 ccatctgcatagacatttggatggaacatcttagagacaaatctaactgtaggtggttta 333 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||| ||||||| Sbjct: 332 tttggatattcttcagtgaatt 311
>ref|XM_390981.1| Gibberella zeae PH-1 chromosome 3 UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Colletotrichum hard-s> (FG10805.1) partial mRNA Length = 420 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Minus Query: 358 agggctccactggttctgtaggatatccaagcagatgcttcc 399 |||||||||||||| | || |||||||||||||||||||| Sbjct: 261 agggctccactggtcacggagaatatccaagcagatgcttcc 220
>ref|NM_181777.1| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 3, mRNA Length = 2678 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| ||||||||| | |||||||| | ||| || ||||| || Sbjct: 1275 ccatctgcatagacatttggatggaacatcttagagacaaatctaactgtaggtggttta 1216 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||| ||||||| Sbjct: 1215 tttggatattcttcagtgaatt 1194
>ref|NM_003336.2| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 1, mRNA Length = 1799 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| ||||||||| | |||||||| | ||| || ||||| || Sbjct: 430 ccatctgcatagacatttggatggaacatcttagagacaaatctaactgtaggtggttta 371 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||| ||||||| Sbjct: 370 tttggatattcttcagtgaatt 349
>gb|AC002521.3| Arabidopsis thaliana chromosome 2 clone T20F6 map CIC11A04, complete sequence Length = 81004 Score = 44.1 bits (22), Expect = 0.54 Identities = 55/66 (83%) Strand = Plus / Plus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 52402 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 52461 Query: 298 cggatt 303 |||||| Sbjct: 52462 cggatt 52467
>gb|M74524.1|HUMHHR6A Human HHR6A (yeast RAD 6 homologue) mRNA, complete cds Length = 1743 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttg 457 ||||||||||||| ||||| ||||||||| | |||||||| | ||| || ||||| || Sbjct: 374 ccatctgcatagacatttggatggaacatcttagagacaaatctaactgtaggtggttta 315 Query: 458 ttggggtaatcttctgtgaatt 479 || || || ||||| ||||||| Sbjct: 314 tttggatattcttcagtgaatt 293
>gb|L19353.1|ATHUBIQUC Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC2) gene, complete cds Length = 2282 Score = 44.1 bits (22), Expect = 0.54 Identities = 55/66 (83%) Strand = Plus / Minus Query: 238 gttgtactcgcgcttgttctcgctgtacattctggctgcttcggagttggctggagaatt 297 |||||||||||||||| | || ||| |||||| || ||||| || || || |||||||| Sbjct: 1562 gttgtactcgcgcttgctttcactgaacattcgtgcagcttccgaatttgcaggagaatt 1503 Query: 298 cggatt 303 |||||| Sbjct: 1502 cggatt 1497
>ref|XM_513169.1| PREDICTED: Pan troglodytes similar to family with sequence similarity 43, member B (LOC456591), mRNA Length = 1190 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gctgcaggcgcttgaagtcgc 620 ||||||||||||||||||||| Sbjct: 628 gctgcaggcgcttgaagtcgc 608
>ref|NM_207334.1| Homo sapiens family with sequence similarity 43, member B (FAM43B), mRNA Length = 2569 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gctgcaggcgcttgaagtcgc 620 ||||||||||||||||||||| Sbjct: 1163 gctgcaggcgcttgaagtcgc 1143
>ref|XM_752262.1| Ustilago maydis 521 hypothetical protein (UM01208.1) partial mRNA Length = 558 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 512 ggcgtgtcatcgggcccgaatatgacggcgttccaga 548 |||||||| |||| ||||| |||||||||||||||| Sbjct: 140 ggcgtgtctgcgggaccgaagatgacggcgttccaga 104
>gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosome 5, complete sequence Length = 203685 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 caaagccagaaatggagacgt 159 ||||||||||||||||||||| Sbjct: 116919 caaagccagaaatggagacgt 116939
>emb|AL391357.20| Human DNA sequence from clone RP11-401M16 on chromosome 1 Contains the gene for calcium/calmodulin-dependent protein kinase II (CaMKIINalpha), the gene for a novel protein (FLJ12875), a ribosomal protein S4 X-linked (RPS4X) pseudogene, the CDA gene for cytidine deaminase, the PINK1 gene for PTEN induced putative kinase 1, a novel gene (FLJ00387), the DDOST gene for dolichyl-diphosphooligosaccharide-protein glycosyltransferase and the 3' end of the KIF17 gene for kinesin family member 17, complete sequence Length = 195076 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gctgcaggcgcttgaagtcgc 620 ||||||||||||||||||||| Sbjct: 75408 gctgcaggcgcttgaagtcgc 75388
>emb|AL033532.36|HS745I14 Human DNA sequence from clone RP4-745I14 on chromosome 1q23.1-24.3 Contains the 3' end of a novel gene, the GPR161 gene for G protein-coupled receptor 161 and one CpG island, complete sequence Length = 81631 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 104 gttttttaatgttttagttcggtggtaca 132 |||||||||||||| ||||| |||||||| Sbjct: 42823 gttttttaatgtttaagttcagtggtaca 42795
>dbj|AK126900.1| Homo sapiens cDNA FLJ44952 fis, clone BRAWH2004078 Length = 2569 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gctgcaggcgcttgaagtcgc 620 ||||||||||||||||||||| Sbjct: 1163 gctgcaggcgcttgaagtcgc 1143
>ref|XM_624237.1| PREDICTED: Apis mellifera similar to ENSANGP00000017916 (LOC551852), mRNA Length = 791 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Minus Query: 347 acatcatatatagggctccactggttctgtaggatatccaagcagatgcttccatctgca 406 |||||||| |||||||||| | ||||||| || ||||| ||||||| |||||| ||| Sbjct: 610 acatcataagtagggctccaacgattctgtaatatgtccaaacagatgcctccatcagca 551 Query: 407 tagatgtttgggtggaacatc 427 || | || |||||||||||| Sbjct: 550 tatacattagggtggaacatc 530
>dbj|AK223045.1| Homo sapiens mRNA for ubiquitin-conjugating enzyme E2A isoform 1 variant, clone: JTH14565 Length = 1768 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 398 ccatctgcatagatgtttgggtggaacatccttgagacaaa 438 ||||||||||||| ||||| ||||||||| | |||||||| Sbjct: 401 ccatctgcatagacatttggatggaacatcttagagacaaa 361
>dbj|AB046016.1| Macaca fascicularis brain cDNA, clone:QccE-15449, similar to human family with sequence similarity 43 member B (FAM43B), mRNA, NM_207334 Length = 2033 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gctgcaggcgcttgaagtcgc 620 ||||||||||||||||||||| Sbjct: 608 gctgcaggcgcttgaagtcgc 588
>emb|BX537313.5| Zebrafish DNA sequence from clone CH211-235E18 in linkage group 2, complete sequence Length = 196642 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 413 tttgggtggaacatccttgagacaaaccgaacagttggtggcttgttggggtaatcttct 472 ||||| || |||||| ||||||| |||| || ||||| ||||||||||| || || ||| Sbjct: 26588 tttggatgaaacatctttgagacgaacctcactgttggaggcttgttgggatattcctct 26529 Query: 473 gtgaa 477 ||||| Sbjct: 26528 gtgaa 26524
>gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome 13, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ccagctctgctccacgacctcacg 228 |||||||||| ||||||||||||| Sbjct: 79760 ccagctctgcaccacgacctcacg 79783
>gb|AC158155.4| Mus musculus chromosome 3, clone RP23-167L9, complete sequence Length = 205345 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aaaaacaacaggagatcaag 81 |||||||||||||||||||| Sbjct: 84604 aaaaacaacaggagatcaag 84585
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 404 gcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgtt 459 |||||||| || ||||||||||| | |||| ||| |||||||| || |||||||| Sbjct: 2209693 gcatagatattggggtggaacattttggagataaagcgaacagtagggggcttgtt 2209638
>ref|XM_599043.2| PREDICTED: Bos taurus similar to CG8312-PA, isoform A (LOC520793), mRNA Length = 972 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gctgcaggcgcttgaagtcg 619 |||||||||||||||||||| Sbjct: 628 gctgcaggcgcttgaagtcg 609
>ref|XM_567181.1| Cryptococcus neoformans var. neoformans JEC21 ubiquitin-conjugating enzyme e2-17 kda (CNA08010) partial mRNA Length = 935 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 404 gcatagatgtttgggtggaacatccttgagacaaaccgaacagttggtggcttgtt 459 |||||||| || ||||||||||| | |||| ||| |||||||| || |||||||| Sbjct: 320 gcatagatattggggtggaacattttggagataaagcgaacagtagggggcttgtt 265
>gb|DQ077738.1| Uncultured bacterium clone pLR1 putative ATPase gene, partial cds; and lipase/esterase gene, complete cds Length = 2402 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 582 tgccggcggncgggtcctgctgc 604 ||||||||| ||||||||||||| Sbjct: 1135 tgccggcggccgggtcctgctgc 1113
>emb|AL133281.12| Human DNA sequence from clone RP11-252O2 on chromosome 9p22.1-22.3 Contains part of the SLC24A2 gene for solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (NCKX2) and a pseudogene similar to part of a novel gene, complete sequence Length = 158697 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ctgtaggatatccaagcaga 392 |||||||||||||||||||| Sbjct: 153750 ctgtaggatatccaagcaga 153731
>ref|XM_963700.1| PREDICTED: Tribolium castaneum similar to CG33531-PA (LOC657229), mRNA Length = 2715 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aatggagacgttccgggcat 168 |||||||||||||||||||| Sbjct: 981 aatggagacgttccgggcat 962
>emb|Z48801.1|SSPPHOA2 Synechococcus PCC7942 phoV gene for alkaline phosphatase Length = 3234 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tatataaaatctttacaatg 20 |||||||||||||||||||| Sbjct: 467 tatataaaatctttacaatg 486
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 tcgtgcggcgcgccgctgatgccg 586 |||||| ||||||||||||||||| Sbjct: 305919 tcgtgcagcgcgccgctgatgccg 305896
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 tcgtgcggcgcgccgctgatgccg 586 |||||| ||||||||||||||||| Sbjct: 30912 tcgtgcagcgcgccgctgatgccg 30889
>gb|AC008759.9| Homo sapiens chromosome 19 clone CTD-3116E22, complete sequence Length = 206395 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ataaaatctttacaatggct 23 |||||||||||||||||||| Sbjct: 193545 ataaaatctttacaatggct 193564
>gb|AC008752.6| Homo sapiens chromosome 19 clone CTD-2623N2, complete sequence Length = 138036 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ataaaatctttacaatggct 23 |||||||||||||||||||| Sbjct: 114259 ataaaatctttacaatggct 114240
>gb|AE012505.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 413 of 460 of the complete genome Length = 10606 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ggcgcgccgctgatgccggc 588 |||||||||||||||||||| Sbjct: 6202 ggcgcgccgctgatgccggc 6221
>gb|AC104453.2| Homo sapiens chromosome 1 clone RP4-672J20, complete sequence Length = 112662 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cacacgcactgaaaaaacaa 69 |||||||||||||||||||| Sbjct: 9927 cacacgcactgaaaaaacaa 9908
>gb|AC159307.2| Mus musculus BAC clone RP23-169J21 from chromosome 12, complete sequence Length = 190562 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gttttttaatgttttagttc 123 |||||||||||||||||||| Sbjct: 80826 gttttttaatgttttagttc 80807
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ggcgcgccgctgatgccggc 588 |||||||||||||||||||| Sbjct: 4641749 ggcgcgccgctgatgccggc 4641768
>ref|XM_395927.2| PREDICTED: Apis mellifera similar to CG17342-PA, isoform A (LOC412470), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 gacaaaccgaacagttggtg 452 |||||||||||||||||||| Sbjct: 1430 gacaaaccgaacagttggtg 1411
>dbj|AB189474.1| Staphylococcus warneri gehWC gene for lipase, complete cds Length = 2740 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 gaaaaaacaacaggagatcaagca 83 ||||||||||||| |||||||||| Sbjct: 845 gaaaaaacaacagaagatcaagca 868
>gb|AC027691.13|AC027691 Homo sapiens chromosome 1 clone RP11-287O16, complete sequence Length = 175977 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cacacgcactgaaaaaacaa 69 |||||||||||||||||||| Sbjct: 111042 cacacgcactgaaaaaacaa 111023
>gb|AC101510.12| Mus musculus chromosome 3, clone RP23-190B7, complete sequence Length = 235744 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaaaacaacaggagatcaag 81 |||||||||||||||||||| Sbjct: 52033 aaaaacaacaggagatcaag 52052
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caccttgcggttgtactcgc 248 |||||||||||||||||||| Sbjct: 1602897 caccttgcggttgtactcgc 1602878
>gb|AY955083.1| Hypocrea lixii ubiquitin conjugating protein mRNA, complete cds Length = 848 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 359 gggctccactggttctgtaggatatccaagca 390 |||||||| |||| ||||||||||||||||| Sbjct: 293 gggctccatcggttttgtaggatatccaagca 262
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 tgacggcgttccagagcgtt 553 |||||||||||||||||||| Sbjct: 1314660 tgacggcgttccagagcgtt 1314641
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 567 gcggcgcgccgctgatgccggcgg 590 ||||| |||||||||||||||||| Sbjct: 3809092 gcggctcgccgctgatgccggcgg 3809069
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccttgcggttgtactcgcgc 250 |||||||||||||||||||| Sbjct: 1602437 ccttgcggttgtactcgcgc 1602418
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 262797 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 397 tccatctgcatagatgtttgggtggaacatccttgagacaaacc 440 ||||| || |||||||||||| ||||||||| |||||||||| Sbjct: 180111 tccatttggatagatgtttggatggaacatctcagagacaaacc 180068 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,889,740 Number of Sequences: 3902068 Number of extensions: 4889740 Number of successful extensions: 92811 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92183 Number of HSP's gapped (non-prelim): 612 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
