>YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I|
          Length = 172

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 23/106 (21%)
 Frame = -3

Query: 478 IAQGMAFGTGSAMAHRAVDAVMG----------------PRTIQHETVVSEAAASMTP-- 353
           ++     G GSA+ H     + G                P++    +V   A  S  P  
Sbjct: 62  VSTAAGVGIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPST 121

Query: 352 -----MDNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECR 230
                +   A + C   +K F DCIN +  + S+C +YL+ L  C+
Sbjct: 122 FASSAISEEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165

>YHR6_YEAST (P38824) Hypothetical 17.3 kDa protein in ERP5-ORC6 intergenic|
           region
          Length = 151

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -3

Query: 349 DNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECRR 227
           D+   D C   SK    C+     D SKCQ Y D   EC++
Sbjct: 97  DSQYYDPCEESSKLSFQCLERNDYDRSKCQEYFDAYRECKK 137

>DCUP_PROMM (Q7V8B4) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 352

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 469 GMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASMTPMDNA 341
           G+ FGT  A+  R VDAV   R  +H   +       TP DNA
Sbjct: 292 GLLFGTPEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNA 334

>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11|
          Length = 154

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -3

Query: 451 GSAMAHRAVDAVMGPRTIQHETVVSEAAASM-TPMDNAADDKCGNPSKAFQDCINHYGSD 275
           GSA+ H       G  +   E   + AAA    P  +     C    + F DC  +  SD
Sbjct: 77  GSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQPCEFEWRQFVDCAQNQ-SD 135

Query: 274 ISKCQFYLDMLNECR 230
           +S C  + D+  +C+
Sbjct: 136 VSLCNGFNDIFKQCK 150

>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG|
          Length = 931

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 325 HTYHQQHCPLES*MQRPQTQQSHAEWYGDPS-QRQQPCAP*HCQYRKPCPEQ 477
           H +HQQ    +   Q+ Q QQ        PS Q+QQ   P H Q  +P P+Q
Sbjct: 132 HHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQ--QPTPQQ 181

>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)|
          Length = 605

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = +1

Query: 337 QQHCPLES*MQRPQTQQSHAEWYGDPSQRQQP------CAP*HCQYRKPCPEQ 477
           +QHC  E    RP  +QS  E Y +  Q+QQP      C    CQ+++  PE+
Sbjct: 88  RQHCQQEERRLRPHCEQSCREQY-EKQQQQQPDKQFKECQQ-RCQWQEQRPER 138

>V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 810

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 337 QQHCPLES*MQRPQTQQSHAEWYGDPSQRQQP 432
           ++     S  QR + +QSH +WY DP +  +P
Sbjct: 269 EESADFSSDFQRLKIKQSHVDWYKDPDKFFEP 300

>CCNK_HUMAN (O75909) Cyclin-K|
          Length = 357

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +1

Query: 325 HTYHQQHCP--LES*MQRPQTQQSHAEWYGDPSQRQQPCAP*HCQYRKPCPE 474
           HT HQ   P  L+   Q PQ QQS      +PSQ QQ       Q ++P  +
Sbjct: 268 HTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQ 319


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,842,716
Number of Sequences: 219361
Number of extensions: 1054963
Number of successful extensions: 2808
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2806
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)