>ref|NM_191994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3138

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 171/213 (80%)
 Strand = Plus / Minus

                                                                        
Query: 506  tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 565
            |||| ||||| |||| ||||||||||||||| ||| |  |||||||||| |  || ||| 
Sbjct: 2770 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 2711

                                                                        
Query: 566  tcgtatggccttgtctcagttttaggcagaatctctccattatcatggcagccggtggaa 625
              || |  |||||||||||||| ||||| ||||| |||||||||||||  || || ||||
Sbjct: 2710 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgggggcaggcggaa 2651

                                                                        
Query: 626  cccgaccattgcgacacaggtagtcccatatgtcttccagcagctgctncttcccgctcc 685
            | || ||||   | |||| |||||||||||  |||||||  | ||||| ||||||| |||
Sbjct: 2650 ctcggccatattggcacatgtagtcccatacatcttccaataactgctccttcccgttcc 2591

                                             
Query: 686  tataggcatcaagtaccatgcgtaggtgccttc 718
            |||| |||||||| ||||| || ||||||||||
Sbjct: 2590 tatatgcatcaagcaccatacgaaggtgccttc 2558

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                            
Query: 506      tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 565
                |||| ||||| |||| ||||||||||||||| ||| |  |||||||||| |  || ||| 
Sbjct: 27724523 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 27724464

                                                                
Query: 566      tcgtatggccttgtctcagttttaggcagaatctctccattatcatgg 613
                  || |  |||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 27724463 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgg 27724416

>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1117_G01
          Length = 125454

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                         
Query: 506   tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 565
             |||| ||||| |||| ||||||||||||||| ||| |  |||||||||| |  || ||| 
Sbjct: 16578 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 16519

                                                             
Query: 566   tcgtatggccttgtctcagttttaggcagaatctctccattatcatgg 613
               || |  |||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 16518 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgg 16471

>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485G01
          Length = 167203

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                          
Query: 506    tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 565
              |||| ||||| |||| ||||||||||||||| ||| |  |||||||||| |  || ||| 
Sbjct: 133089 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 133030

                                                              
Query: 566    tcgtatggccttgtctcagttttaggcagaatctctccattatcatgg 613
                || |  |||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 133029 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgg 132982

>dbj|AB090813.1| Anopheles gambiae retrotransposon RTAg4 DNA, complete sequence
          Length = 7072

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 631  ccattgcgacacaggtagtccc 652
            ||||||||||||||||||||||
Sbjct: 6118 ccattgcgacacaggtagtccc 6097

>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence
          Length = 212613

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 686  tataggcatcaagtaccatgc 706
            |||||||||||||||||||||
Sbjct: 3072 tataggcatcaagtaccatgc 3092

>gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosome 3, complete sequence
          Length = 192136

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 686   tataggcatcaagtaccatgc 706
             |||||||||||||||||||||
Sbjct: 99166 tataggcatcaagtaccatgc 99146

>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence
          Length = 181083

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 341   caccagaaccaccaaggaact 361
             |||||||||||||||||||||
Sbjct: 65393 caccagaaccaccaaggaact 65373

>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete
              sequence
          Length = 223861

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 341    caccagaaccaccaaggaact 361
              |||||||||||||||||||||
Sbjct: 209221 caccagaaccaccaaggaact 209201

>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete
              sequence
          Length = 213098

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    caccagaaccaccaaggaact 361
              |||||||||||||||||||||
Sbjct: 209103 caccagaaccaccaaggaact 209123

>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204
          Length = 35868

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   ctactcctacttctgccaaaa 202
             |||||||||||||||||||||
Sbjct: 34446 ctactcctacttctgccaaaa 34426

>emb|AL844490.4| Mouse DNA sequence from clone RP23-98P13 on chromosome X, complete
             sequence
          Length = 108612

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 647   agtcccatatgtcttccagca 667
             |||||||||||||||||||||
Sbjct: 83789 agtcccatatgtcttccagca 83809

>ref|NM_101907.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
            tubulin binding AT1G20570 mRNA, complete cds
          Length = 2931

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   ttagatgctgaaacaacaag 89
            ||||||||||||||||||||
Sbjct: 1502 ttagatgctgaaacaacaag 1483

>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence
          Length = 222682

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    gataggaggctaacatggcggtca 299
              |||||||||||||||| |||||||
Sbjct: 150567 gataggaggctaacatagcggtca 150544

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 442     agctcggcgacgctctcctcctcg 465
               |||||||||| |||||||||||||
Sbjct: 1303638 agctcggcgaagctctcctcctcg 1303615

>gb|AC133206.3| Mus musculus BAC clone RP23-110D10 from chromosome 1, complete sequence
          Length = 177383

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aagagcatgaaagcacaggc 231
              ||||||||||||||||||||
Sbjct: 116549 aagagcatgaaagcacaggc 116568

>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds
          Length = 660392

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 652    catatgtcttccagcagctg 671
              ||||||||||||||||||||
Sbjct: 480305 catatgtcttccagcagctg 480324

>ref|XM_500587.1| Yarrowia lipolytica CLIB122, YALI0B06919g predicted mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 ggttcagaagactcgaccac 501
           ||||||||||||||||||||
Sbjct: 437 ggttcagaagactcgaccac 418

>emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chromosome 10, complete
             sequence
          Length = 55835

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   taaaggttgcttctgccaga 154
             ||||||||||||||||||||
Sbjct: 27805 taaaggttgcttctgccaga 27786

>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the
             PSMA7 gene for proteasome (prosome, macropain) subunit
             alpha type 7, the HRH3 gene for histamine receptor H3, the
             SS18L1 gene for synovial sarcoma translocation gene on
             chromosome 18-like 1, the GTPBP5 gene for GTP binding
             protein 5 (putative), the 3' end of the C20orf40 gene for
             a novel protein similar to Pleurodeles waltlii RAP55
             protein and seven CpG islands, complete sequence
          Length = 100976

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   ctccctggccttgagaggcc 425
             ||||||||||||||||||||
Sbjct: 30569 ctccctggccttgagaggcc 30588

>emb|AL033381.2|HS856G1 Human DNA sequence from clone RP5-856G1 on chromosome 6p24.1-25.3,
             complete sequence
          Length = 151795

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 595   aatctctccattatcatggcagcc 618
             |||||||||||||| |||||||||
Sbjct: 30831 aatctctccattatgatggcagcc 30808

>gb|AF462673.1| Homo sapiens isolate PELIZ immunoglobulin light chain variable
           region mRNA, partial cds
          Length = 376

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 529 ctctcctggaagctgctgat 548
           ||||||||||||||||||||
Sbjct: 132 ctctcctggaagctgctgat 113

>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence
          Length = 169741

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 298    caagaattacagaaaggcacccat 321
              ||||||||| ||||||||||||||
Sbjct: 108467 caagaattagagaaaggcacccat 108490

>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I,
             complete sequence
          Length = 143879

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    ttagatgctgaaacaacaag 89
             ||||||||||||||||||||
Sbjct: 14991 ttagatgctgaaacaacaag 15010

>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I,
             complete sequence
          Length = 99231

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ttagatgctgaaacaacaag 89
             ||||||||||||||||||||
Sbjct: 40124 ttagatgctgaaacaacaag 40105

>emb|AL122013.5|CNS01DSU Human chromosome 14 DNA sequence BAC R-204K16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173010

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 652    catatgtcttccagcagctg 671
              ||||||||||||||||||||
Sbjct: 161024 catatgtcttccagcagctg 161005

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    ggttcagaagactcgaccac 501
              ||||||||||||||||||||
Sbjct: 923460 ggttcagaagactcgaccac 923441

>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete
              sequence
          Length = 213704

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 538    aagctgctgatgcaggagagtgct 561
              |||||| |||||||||||||||||
Sbjct: 196119 aagctgatgatgcaggagagtgct 196142


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,168,665
Number of Sequences: 3902068
Number of extensions: 5168665
Number of successful extensions: 100526
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100383
Number of HSP's gapped (non-prelim): 142
length of query: 719
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 696
effective length of database: 17,143,297,704
effective search space: 11931735201984
effective search space used: 11931735201984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)