| Clone Name | rbags17o14 |
|---|---|
| Clone Library Name | barley_pub |
>MNTH_MYCLE (Q50103) Probable manganese transport protein mntH| Length = 426 Score = 30.4 bits (67), Expect = 2.6 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 156 TNSRGETLLGWASVLQISMLNVVL 85 TN T+LGWA + +S+LNVVL Sbjct: 396 TNHPATTVLGWAVAILVSLLNVVL 419
>FUR2_MYCFO (O69451) Ferric uptake regulation protein 2 (Ferric uptake| regulator 2) Length = 146 Score = 28.9 bits (63), Expect = 7.5 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 289 TRSADSRYHCLKRSSGPRASLNCSDTSSLTCLALVE 396 +R D+ +H + RS G A ++CS S CL E Sbjct: 85 SRIGDNHHHVVCRSCGAIADVDCSXAGSAPCLTASE 120
>MNTH_MYCBO (O69443) Probable manganese transport protein mntH (BRAMP)| Length = 684 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -2 Query: 156 TNSRGETLLGWASVLQISMLNVVL 85 TN R T +GW + +S+LNV+L Sbjct: 654 TNHRATTWVGWVVAVMVSLLNVML 677
>SLBP_HUMAN (Q14493) Histone RNA hairpin-binding protein (Histone| stem-loop-binding protein) Length = 270 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = +1 Query: 247 DACGWHPKPEQEQTTRSADSRYHCLKRSSGPRASLNCSDTSS 372 D W P+ +E R A+ R GP+ CSD +S Sbjct: 36 DGRRWRPEDAEEAEHRGAERRPESFTTPEGPKPRSRCSDWAS 77
>MNTH_MYCTU (O05916) Probable manganese transport protein mntH| Length = 428 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -2 Query: 156 TNSRGETLLGWASVLQISMLNVVL 85 TN R T +GW + +S+LNV+L Sbjct: 398 TNHRATTWVGWVVAVMVSLLNVML 421 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,008,859 Number of Sequences: 219361 Number of extensions: 1190108 Number of successful extensions: 2805 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2742 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2805 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)