ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17o13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 315 bits (159), Expect = 1e-82 Identities = 376/447 (84%), Gaps = 1/447 (0%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 890 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 831 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 329 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 830 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 771 Query: 330 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 389 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 770 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 711 Query: 390 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 449 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 710 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 651 Query: 450 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 509 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 650 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 591 Query: 510 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 569 |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||||| Sbjct: 590 tagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagca 531 Query: 570 aatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 629 || ||||||||||||| | |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 530 aacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcacc 472 Query: 630 aaacacacggtttccagtcgtagtcct 656 ||| |||||||||||||| || ||||| Sbjct: 471 aaagacacggtttccagtggttgtcct 445
>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full insert sequence Length = 1219 Score = 315 bits (159), Expect = 1e-82 Identities = 376/447 (84%), Gaps = 1/447 (0%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 927 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 329 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 926 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 867 Query: 330 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 389 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 866 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 807 Query: 390 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 449 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 806 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 747 Query: 450 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 509 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 746 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 687 Query: 510 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 569 |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||||| Sbjct: 686 tagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagca 627 Query: 570 aatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 629 || ||||||||||||| | |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 626 aacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcacc 568 Query: 630 aaacacacggtttccagtcgtagtcct 656 ||| |||||||||||||| || ||||| Sbjct: 567 aaagacacggtttccagtggttgtcct 541
>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 Score = 301 bits (152), Expect = 2e-78 Identities = 376/448 (83%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 900 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 841 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 329 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 840 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 781 Query: 330 gctggcttggttgatttggccatgctagg-atcagcgcggatggcagcgtgaaccttctt 388 | ||||||||||||||||||| |||| |||||| ||||||||||| || |||||||| Sbjct: 780 tccttcttggttgatttggccatggtagggatcagcacggatggcagcatggaccttctt 721 Query: 389 gtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagt 448 ||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | Sbjct: 720 gtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggc 661 Query: 449 ttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcc 508 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 660 ttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccacc 601 Query: 509 atagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagc 568 |||||||||||||||||||| |||| ||| || |||||||||||||||||| ||||| Sbjct: 600 gtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagc 541 Query: 569 aaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcac 628 ||| ||||||||||||| | |||||||| |||||||| |||||||||||||| || |||| Sbjct: 540 aaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcac 482 Query: 629 caaacacacggtttccagtcgtagtcct 656 |||| |||||||||||||| || ||||| Sbjct: 481 caaagacacggtttccagtggttgtcct 454
>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full insert sequence Length = 1219 Score = 299 bits (151), Expect = 6e-78 Identities = 375/447 (83%), Gaps = 2/447 (0%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgac-aga 928 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 329 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 927 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 868 Query: 330 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 389 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 867 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 808 Query: 390 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 449 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 807 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 748 Query: 450 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 509 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 747 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 688 Query: 510 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 569 |||||||||||||||||||| ||| ||| || |||||||||||||||||| |||||| Sbjct: 687 tagatgtacttgcggtgaataccagaatcaagctgcttctcgtccttcttgaacccagca 628 Query: 570 aatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 629 || ||||||||||||| | |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 627 aacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcacc 569 Query: 630 aaacacacggtttccagtcgtagtcct 656 ||| |||||||||||||| || ||||| Sbjct: 568 aaagacacggtttccagtggttgtcct 542
>ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 293 bits (148), Expect = 4e-76 Identities = 335/396 (84%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 261 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtga 320 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 848 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgtatctcttgtgg 789 Query: 321 gtcttgggagctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtga 380 || || | |||||| |||||||||||| ||||||| |||||||||||||| || Sbjct: 788 gtagccggttccttcttggtcgatttggccatggtaggatcggcgcggatggcagcatgg 729 Query: 381 accttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactg 440 ||||||||||| | || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 728 accttcttgtacagtgattccatgccatcagcgtcaattcccttcttgaggtactcacta 669 Query: 441 aagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaaca 500 ||||| | |||| | ||||| |||||||| || || | ||||||||||||||||| || Sbjct: 668 aagtgggcttggaatttctcaggttcctcctcagccatagacctcatgtagtcagccacg 609 Query: 501 tgccctccatagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttg 560 ||||| || |||||||||||||||||||| |||| ||| || |||||||||||||||| Sbjct: 608 tgcccaccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttg 549 Query: 561 aaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccctt 620 || |||||||| ||||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct: 548 aacccagcaaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctccctt 490 Query: 621 aagtgcaccaaacacacggtttccagtcgtagtcct 656 || |||||||| |||||||||||||| || ||||| Sbjct: 489 gagggcaccaaagacacggtttccagtggttgtcct 454
>gb|AY109375.1| Zea mays CL457_2 mRNA sequence Length = 1397 Score = 285 bits (144), Expect = 9e-74 Identities = 346/412 (83%), Gaps = 1/412 (0%) Strand = Plus / Minus Query: 251 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 310 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 933 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 874 Query: 311 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 370 |||||| || ||| || | |||||||||| ||| | ||| ||||||||| ||||| Sbjct: 873 cctcttatgctcctttggtggctgcttggttgacttgacaatggaaggatcagcacggat 814 Query: 371 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 430 |||||| || ||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 813 ggcagcatggaccttcttgtacagagcttccatgtcatcagcctcaattcccttcttaat 754 Query: 431 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 490 ||||||||||||||||| ||||||||||| || ||||| || || || ||||||||| Sbjct: 753 gtactcactgaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgta 694 Query: 491 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 550 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||| || Sbjct: 693 gtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgtc 634 Query: 551 gtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtcca 610 |||||||||||||||||||| ||||| || |||| | ||||| ||||| ||||| |||| Sbjct: 633 atccttcttgaaaccagcaaacctcttctcgctgt-gaggaatatccaggccaccatcca 575 Query: 611 aagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 |||||||||| || |||||||| |||||||| ||||| |||||||| ||||| Sbjct: 574 aagctcccttgagggcaccaaagacacggttcccagttgtagtcctaataag 523
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence Length = 1365 Score = 270 bits (136), Expect = 5e-69 Identities = 344/412 (83%), Gaps = 1/412 (0%) Strand = Plus / Minus Query: 251 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 310 ||||||||| || | ||| ||||||||||||| |||||| || || |||||||||||||| Sbjct: 917 gttgagcctttcaatgagactggccttcctctgctcgtatgtcagtttcttggggttgta 858 Query: 311 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 370 ||||||||| ||| || | |||||||||| ||| ||| ||||||||| ||||| Sbjct: 857 cctcttgtgctcctttggtggctgcttggttgacttgaccacagaaggatcagcacggat 798 Query: 371 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 430 |||||| || ||||||||||| | ||||||||||| ||||| ||||||||||| || Sbjct: 797 ggcagcatggaccttcttgtacagagcttccatgtcgtcagcctcaattcccttcttaat 738 Query: 431 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 490 ||||||||||||||||| ||||||||||| || ||||| || || || ||||||||| Sbjct: 737 gtactcactgaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgta 678 Query: 491 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 550 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||| || Sbjct: 677 gtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgtc 618 Query: 551 gtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtcca 610 |||||||||||||||||||| ||||| || |||| | ||||| ||||| ||||| |||| Sbjct: 617 atccttcttgaaaccagcaaacctcttctcgctgt-gaggaatatccaggccaccatcca 559 Query: 611 aagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 |||||||||| || |||||||| |||||||| ||||| |||||||| ||||| Sbjct: 558 aagctcccttgagggcaccaaagacacggttcccagttgtagtcctaataag 507
>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence Length = 1212 Score = 182 bits (92), Expect = 1e-42 Identities = 333/412 (80%), Gaps = 1/412 (0%) Strand = Plus / Minus Query: 251 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 310 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 932 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 873 Query: 311 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 370 |||||| || ||| || | |||||||||| || | ||| |||||| || ||||| Sbjct: 872 cctcttatgctcctttggtggctgcttggttgacttaacaatggaaggatcggcacggat 813 Query: 371 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 430 |||||| || ||||||||||| | ||||| || |||||||| | ||||||||| || Sbjct: 812 ggcagcatggaccttcttgtacagcgcttctatttcatcagcctcaactcccttcttaat 753 Query: 431 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 490 |||| |||||||||| | |||||||| || || ||||| || || || | ||||||| Sbjct: 752 gtacgcactgaagtggctctggtacttttctggctcctcttcagcaaggttcttcatgta 693 Query: 491 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 550 |||||||||||| || |||||||||||| ||||||| | |||||||||| ||| || Sbjct: 692 gtcagcaacatggccaccatagatgtacctgcggtgggtatcagcatccaactgcttgtc 633 Query: 551 gtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtcca 610 |||||||||||| |||||||| ||||| || |||| | ||||| ||||| || || |||| Sbjct: 632 gtccttcttgaatccagcaaacctcttctcgctgt-gaggaatatccaggcctccatcca 574 Query: 611 aagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | |||||||| || |||||||| |||||||| || || |||||||||||||| Sbjct: 573 atgctcccttgagggcaccaaagacacggttccctgttgtagtcctgataag 522
>gb|AY106024.1| Zea mays PCO063168 mRNA sequence Length = 620 Score = 172 bits (87), Expect = 9e-40 Identities = 205/243 (84%), Gaps = 1/243 (0%) Strand = Plus / Minus Query: 420 cccttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagc 479 ||||||||||||||||| |||||||||| |||||||||||||| |||||||| || || Sbjct: 587 cccttcttgatgtactcgctgaagtgagcctggtacttctcgggctcctcatcagccaga 528 Query: 480 gacctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcc 539 | |||| || ||||||||||| ||||||||||||||||| || || ||||||||| Sbjct: 527 ttcttcatatactcagcaacatggagaccatagatgtacttgcgatggatatcagcatcc 468 Query: 540 agagacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccag 599 || ||| || ||||||||||| |||||||| ||||| || ||||| || ||| || || Sbjct: 467 agctgcttatcatccttcttgaagccagcaaacctcttatcgctgtgagg-aatatctag 409 Query: 600 accaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgat 659 |||||| |||||||||||||| || |||||||| |||||||||||||| |||||||| || Sbjct: 408 accaccatccaaagctcccttgagggcaccaaagacacggtttccagtagtagtcctaat 349 Query: 660 aag 662 ||| Sbjct: 348 aag 346
>ref|NM_123336.3| Arabidopsis thaliana 5S rRNA binding / structural constituent of ribosome AT5G39740 mRNA, complete cds Length = 1223 Score = 141 bits (71), Expect = 3e-30 Identities = 96/103 (93%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 530 Query: 620 taagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 529 tgagtgcaccaaacacacggtttccagtggtagtcctgataag 487
>gb|BT008706.1| Arabidopsis thaliana At5g39740 gene, complete cds Length = 906 Score = 141 bits (71), Expect = 3e-30 Identities = 96/103 (93%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 546 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 488 Query: 620 taagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 487 tgagtgcaccaaacacacggtttccagtggtagtcctgataag 445
>gb|AY093123.1| Arabidopsis thaliana ribosomal protein L5 - like (At5g39740) mRNA, complete cds Length = 1100 Score = 141 bits (71), Expect = 3e-30 Identities = 96/103 (93%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 576 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 518 Query: 620 taagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 517 tgagtgcaccaaacacacggtttccagtggtagtcctgataag 475
>gb|AY079020.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1128 Score = 141 bits (71), Expect = 3e-30 Identities = 96/103 (93%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 530 Query: 620 taagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 529 tgagtgcaccaaacacacggtttccagtggtagtcctgataag 487
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 482 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 541 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38968845 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38968786 Query: 542 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 601 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 38968785 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 38968727 Query: 602 caccgtccaaagctccct 619 |||| ||||||||||||| Sbjct: 38968726 caccatccaaagctccct 38968709 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 482 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 541 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38963527 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38963468 Query: 542 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 601 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 38963467 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 38963409 Query: 602 caccgtccaaagctccct 619 |||| ||||||||||||| Sbjct: 38963408 caccatccaaagctccct 38963391 Score = 133 bits (67), Expect = 8e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 335 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 394 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133 Query: 395 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 454 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 38969073 Query: 455 cttctcgggttcctc 469 ||||| |||||||| Sbjct: 38969072 tttctcaggttcctc 38969058 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 335 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 394 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801 Query: 395 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 454 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 38963741 Query: 455 cttctcgggttcctc 469 ||||| |||||||| Sbjct: 38963740 tttctcaggttcctc 38963726 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 261 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 310 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 38964020 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 38963971 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 38969401 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 38969342 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgta 310 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 38969341 ctggccttcctctgttcgtaggttagcttcttgaggttgta 38969301 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 625 gcaccaaacacacggtttccagtcgtagtcct 656 |||||||| |||||||||||||| || ||||| Sbjct: 38968537 gcaccaaagacacggtttccagtggttgtcct 38968506 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 625 gcaccaaacacacggtttccagtcgtagtcct 656 |||||||| |||||||||||||| || ||||| Sbjct: 38963221 gcaccaaagacacggtttccagtggttgtcct 38963190
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 482 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 541 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 42478 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 42419 Query: 542 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 601 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 42418 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 42360 Query: 602 caccgtccaaagctccct 619 |||| ||||||||||||| Sbjct: 42359 caccatccaaagctccct 42342 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 482 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 541 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 37160 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 37101 Query: 542 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 601 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 37100 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 37042 Query: 602 caccgtccaaagctccct 619 |||| ||||||||||||| Sbjct: 37041 caccatccaaagctccct 37024 Score = 133 bits (67), Expect = 8e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 335 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 394 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766 Query: 395 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 454 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 42706 Query: 455 cttctcgggttcctc 469 ||||| |||||||| Sbjct: 42705 tttctcaggttcctc 42691 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 335 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 394 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434 Query: 395 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 454 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 37374 Query: 455 cttctcgggttcctc 469 ||||| |||||||| Sbjct: 37373 tttctcaggttcctc 37359 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 261 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 310 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 37653 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 37604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 43034 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 42975 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgta 310 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 42974 ctggccttcctctgttcgtaggttagcttcttgaggttgta 42934 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 625 gcaccaaacacacggtttccagtcgtagtcct 656 |||||||| |||||||||||||| || ||||| Sbjct: 42170 gcaccaaagacacggtttccagtggttgtcct 42139 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 625 gcaccaaacacacggtttccagtcgtagtcct 656 |||||||| |||||||||||||| || ||||| Sbjct: 36854 gcaccaaagacacggtttccagtggttgtcct 36823
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 482 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 541 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 133631 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 133572 Query: 542 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 601 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 133571 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 133513 Query: 602 caccgtccaaagctccct 619 |||| ||||||||||||| Sbjct: 133512 caccatccaaagctccct 133495 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 482 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 541 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 128313 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 128254 Query: 542 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 601 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 128253 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 128195 Query: 602 caccgtccaaagctccct 619 |||| ||||||||||||| Sbjct: 128194 caccatccaaagctccct 128177 Score = 133 bits (67), Expect = 8e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 335 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 394 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919 Query: 395 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 454 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 133859 Query: 455 cttctcgggttcctc 469 ||||| |||||||| Sbjct: 133858 tttctcaggttcctc 133844 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 335 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 394 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587 Query: 395 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 454 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 128527 Query: 455 cttctcgggttcctc 469 ||||| |||||||| Sbjct: 128526 tttctcaggttcctc 128512 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 261 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 310 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 128806 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 128757 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 269 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 134187 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 134128 Query: 270 ctggccttcctctcctcgtaggtgagcttcttggggttgta 310 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 134127 ctggccttcctctgttcgtaggttagcttcttgaggttgta 134087 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 625 gcaccaaacacacggtttccagtcgtagtcct 656 |||||||| |||||||||||||| || ||||| Sbjct: 133323 gcaccaaagacacggtttccagtggttgtcct 133292 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 625 gcaccaaacacacggtttccagtcgtagtcct 656 |||||||| |||||||||||||| || ||||| Sbjct: 128007 gcaccaaagacacggtttccagtggttgtcct 127976
>emb|BX831866.1|CNS09ZT2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1048 Score = 133 bits (67), Expect = 8e-28 Identities = 95/103 (92%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 565 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 507 Query: 620 taagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | ||| |||||||||||||||||||||| |||||||||||||| Sbjct: 506 tgagttcaccaaacacacggtttccagtggtagtcctgataag 464
>emb|BX832617.1|CNS09YMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 117 bits (59), Expect = 5e-23 Identities = 93/103 (90%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 |||||||||||||||||| ||||| || |||| | || ||||| |||||||||||||||| Sbjct: 573 gaaaccagcaaatctcttttcactttgaggga-tatcaagacctccgtccaaagctccct 515 Query: 620 taagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 | ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 514 tgagtgcaccaaacacacgttttccagtggtagtcctgataag 472
>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); structural constituent of ribosome AT3G25520 (ATL5) mRNA, complete cds Length = 1254 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 745 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 686 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 685 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 626 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 625 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 567 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 566 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 507 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 969 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 505 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 504 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 445 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds Length = 906 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 505 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 504 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 445 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 1161 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 742 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 683 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 682 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 623 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 622 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 564 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 563 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 504 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 890 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 846
>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 1151 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 740 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 681 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 680 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 621 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 620 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 562 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 561 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 502 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 925 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 505 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 504 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 445 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1108 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 730 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 671 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 670 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 611 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 610 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 552 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 551 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 492 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 878 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 834
>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds Length = 906 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 505 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 504 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 445 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 715 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 656 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 655 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 596 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 595 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 537 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 536 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 477 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 863 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 819
>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence Length = 1248 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 745 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 686 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 685 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 626 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 625 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 567 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 566 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 507 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA, complete cds Length = 1117 Score = 103 bits (52), Expect = 7e-19 Identities = 194/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 740 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 681 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 680 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 621 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| |||| | || ||||| Sbjct: 620 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggga-tatcaagacc 562 Query: 603 accgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||| |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 561 accatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 502 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds Length = 1171 Score = 97.6 bits (49), Expect = 4e-17 Identities = 89/101 (88%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 562 aaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccctta 621 |||||||||| |||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 565 aaccagcaaacctcttgtcactgtgagg-aatgtccaatccaccatccaaagctcccttc 507 Query: 622 agtgcaccaaacacacggtttccagtcgtagtcctgataag 662 || |||||||| || ||||||||||| ||||| |||||||| Sbjct: 506 agagcaccaaaaacgcggtttccagttgtagttctgataag 466 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 420 cccttcttgatgtactcactgaagtgagtttggtacttctcgggttc 466 ||||||||||||||||| |||||||||| ||| || ||||| ||||| Sbjct: 707 cccttcttgatgtactcgctgaagtgagattgatatttctcaggttc 661
>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated protein, complete cds Length = 1100 Score = 81.8 bits (41), Expect = 3e-12 Identities = 72/81 (88%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 561 aaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccctt 620 ||||||||||| || ||||||||||| || ||| |||| ||| || |||||||||||||| Sbjct: 607 aaaccagcaaaccttttgtcactgtgagg-aatatccaaacctccatccaaagctccctt 549 Query: 621 aagtgcaccaaacacacggtt 641 |||||||||||||||||||| Sbjct: 548 gagtgcaccaaacacacggtt 528 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 gtgagcttcttggggttgtacctcttgtg 319 ||||||||||| |||||||||||||||| Sbjct: 877 gtgagcttcttcaggttgtacctcttgtg 849 Score = 40.1 bits (20), Expect = 9.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 372 gcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatg 431 ||||| |||||||||||||||| | | || || |||||||| || || |||||||| Sbjct: 796 gcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccctttcttgata 737 Query: 432 tactcactgaagtgagtttg 451 || | ||||||||||||||| Sbjct: 736 tattgactgaagtgagtttg 717
>dbj|AB016876.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21 Length = 44499 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 617 ccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 |||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 8034 ccttgagtgcaccaaacacacggtttccagtggtagtcctgataag 7989 Score = 71.9 bits (36), Expect = 3e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 560 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||||||||||||||||||| ||| || || ||||| |||||||||||||||| Sbjct: 8206 gaaaccagcaaatctcttgtcactgtgaggg-atatcaagacctccgtccaaagctccct 8148
>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene Length = 1115 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/99 (86%), Gaps = 5/99 (5%) Strand = Plus / Minus Query: 545 cttctcgtccttcttg--aaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 |||||||||||| ||| ||||||||||| ||||||||||||| | ||||| |||| ||| Sbjct: 570 cttctcgtccttgttgcaaaaccagcaaacctcttgtcactgt-gaggaatatccaaacc 512 Query: 603 accgtccaaagc-tcccttaagtg-caccaaacacacgg 639 || |||||||| |||||| |||| |||||||||||||| Sbjct: 511 tccatccaaagcttcccttgagtgtcaccaaacacacgg 473
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 58.0 bits (29), Expect = 4e-05 Identities = 156/197 (79%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 482 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 56653 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 56712 Query: 483 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 542 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 56713 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 56772 Query: 543 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagacc 602 ||| | ||||| | ||| ||||||||||||||||||||||| ||| || || ||||| Sbjct: 56773 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgaggg-atatcaagacc 56831 Query: 603 accgtccaaagctccct 619 ||| |||||||| |||| Sbjct: 56832 accatccaaagcaccct 56848 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 617 ccttaagtgcaccaaacacacggtttccagtcgtagtcctgataag 662 ||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 56962 ccttaagagcaccgaacacacggtttcctgttgtggtcctgataag 57007
>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds Length = 399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 276 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggg 328 |||||||| || ||||| |||||||| |||||||||||||||| |||||||| Sbjct: 288 ttcctctcttcataggtcagcttcttaaggttgtacctcttgtgtgtcttggg 236 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 484 tcatgtagtcagcaacatgccctccatagatgtacttgcggtgaa 528 ||||||| |||||||||| || |||||||| ||||||||||||| Sbjct: 80 tcatgtatgcagcaacatggccaccatagatatacttgcggtgaa 36 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 369 atggcagcgtgaaccttcttgta 391 ||||||||||||||||||||||| Sbjct: 195 atggcagcgtgaaccttcttgta 173
>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA Length = 1114 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 276 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 330 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 864 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 810 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 363 gcgcggatggcagcgtgaaccttcttgta 391 ||||| |||||||| |||||||||||||| Sbjct: 777 gcgcgtatggcagcatgaaccttcttgta 749
>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence Length = 1161 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 276 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 330 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 887 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 833 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 601 ccaccgtccaaagctcccttaagtgcaccaaacacacggtt 641 ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 563 ccaccatccaatgcacccttgagagcaccaaacacacggtt 523 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 493 cagcaacatgccctccatagatgtacttgcggtgaa 528 ||||||| || || |||||||| ||||||||||||| Sbjct: 670 cagcaacgtggccaccatagatatacttgcggtgaa 635
>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence Length = 1274 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 601 ccaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgata 660 ||||| ||||| || ||||| || |||||||||||||| |||||||| ||||| || ||| Sbjct: 617 ccaccatccaatgcacccttgagagcaccaaacacacgatttccagtagtagttctaata 558 Query: 661 ag 662 || Sbjct: 557 ag 556 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 495 gcaacatgccctccatagatgtacttgcggtgaatctcagcatc 538 |||||||| || ||||| || ||||||||||||| ||||||||| Sbjct: 722 gcaacatggccaccatatatatacttgcggtgaacctcagcatc 679
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 gccttcctctcctcgtaggtgagcttctt 301 |||||||||||||| |||||||||||||| Sbjct: 46107 gccttcctctcctcataggtgagcttctt 46135 Score = 40.1 bits (20), Expect = 9.0 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 564 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 619 ||||||||||| || ||||||| | ||||| |||||||| || ||||| ||||||| Sbjct: 46724 ccagcaaatcttttatcactgt-gaggaatatccagacccccatccaaggctccct 46778
>emb|Z99296.2|SPAC3H5 S.pombe chromosome I cosmid c3H5 Length = 34284 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 540 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 1285 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 1230
>ref|XM_780232.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580159 (LOC580159), mRNA Length = 1902 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 203 ctcgtcatcctcgtcatcgtcggc 226 |||||||||||||||||||||||| Sbjct: 1131 ctcgtcatcctcgtcatcgtcggc 1108 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tcatcctcgtcatcgtcggc 226 |||||||||||||||||||| Sbjct: 1187 tcatcctcgtcatcgtcggc 1168
>emb|AL031528.1|SPBC11C11 S.pombe chromosome II cosmid c11C11 Length = 22500 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 485 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 540 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 20215 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 20270
>ref|NM_001022319.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC11C11.09c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 540 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 569
>ref|NM_001019604.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC3H5.12c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 540 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 569
>gb|U48270.1|SPU48270 Schizosaccharomyces pombe ribosomal protein L5 gene, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 540 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 660 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 605
>dbj|AB016045.1| Schizosaccharomyces pombe mRNA for ribosomal protein L5 homolog, partial cds Length = 779 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 540 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 486 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 431
>ref|XM_500389.1| Yarrowia lipolytica CLIB122, YALI0B01540g predicted mRNA Length = 210 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 202 actcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||||| Sbjct: 208 actcgtcatcctcgtcatcgtcg 186
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 202 actcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||||| Sbjct: 245151 actcgtcatcctcgtcatcgtcg 245173
>ref|XM_366233.1| Magnaporthe grisea 70-15 predicted protein (MG10452.4) partial mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 207 tcatcctcgtcatcgtcggcggcaccagca 236 ||||| |||||||||||||||||| ||||| Sbjct: 452 tcatcgtcgtcatcgtcggcggcagcagca 423 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 207 tcatcctcgtcatcgtcggcggcaccagca 236 ||||| |||||||||||||||||| ||||| Sbjct: 383 tcatcgtcgtcatcgtcggcggcagcagca 354 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tcgtcatcgtcggcggcaccagca 236 |||||||||||||||||| ||||| Sbjct: 653 tcgtcatcgtcggcggcagcagca 630
>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds, clone: RAFL22-05-O03 Length = 517 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 423 ttcttgatgtactcactgaagtgagtttggtacttctc 460 ||||||||||| |||||||||||||||| ||||||| Sbjct: 114 ttcttgatgtaagcactgaagtgagtttgtaacttctc 77 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 275 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 319 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 262 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 218
>ref|XM_363564.1| Magnaporthe grisea 70-15 hypothetical protein (MG01490.4) partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 catcctcgtcatcgtcggcgg 228 ||||||||||||||||||||| Sbjct: 261 catcctcgtcatcgtcggcgg 281
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 150462 tcgtcatcctcgtcatcgtcg 150442
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 191 tcgtcatcctcgtcatcgtcg 211
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gaggctggccttcctctcctc 286 ||||||||||||||||||||| Sbjct: 69373 gaggctggccttcctctcctc 69393
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gaggctggccttcctctcctc 286 ||||||||||||||||||||| Sbjct: 112651 gaggctggccttcctctcctc 112671
>gb|AF513502.1| Homo sapiens STRA8 (STRA8) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gaggctggccttcctctcctc 286 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>emb|AJ890137.1| Murid Herpesvirus 2 r138 gene (partial), r139 gene, r140 gene, r141 gene and r142 gene (partial) Length = 7462 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 3340 tcgtcatcctcgtcatcgtcg 3360
>ref|NM_182489.1| Homo sapiens STRA8 (LOC346673), mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gaggctggccttcctctcctc 286 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 13719 tcgtcatcctcgtcatcgtcg 13699
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 111766 tcgtcatcctcgtcatcgtcg 111746
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 190797 tcgtcatcctcgtcatcgtcg 190817
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA Length = 2288 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 962 tcgtcatcctcgtcatcgtcg 942
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gaggctggccttcctctcctc 286 ||||||||||||||||||||| Sbjct: 92688 gaggctggccttcctctcctc 92668
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gaggctggccttcctctcctc 286 ||||||||||||||||||||| Sbjct: 89870 gaggctggccttcctctcctc 89850
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 130980 tcgtcatcctcgtcatcgtcg 131000
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 115897 tcgtcatcctcgtcatcgtcg 115917
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tcgtcatcctcgtcatcgtcg 224 ||||||||||||||||||||| Sbjct: 129620 tcgtcatcctcgtcatcgtcg 129640
>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end Length = 2006 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 ttcccttcttgatgtactcac 438 ||||||||||||||||||||| Sbjct: 906 ttcccttcttgatgtactcac 926
>ref|NM_180473.1| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.2 mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gacagaaaggaacaggtccg 126 |||||||||||||||||||| Sbjct: 677 gacagaaaggaacaggtccg 696
>ref|NM_121109.2| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.1 mRNA, complete cds Length = 1270 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gacagaaaggaacaggtccg 126 |||||||||||||||||||| Sbjct: 777 gacagaaaggaacaggtccg 796
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cttccatgtcatcagctgag 416 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC113006.9| Mus musculus chromosome 16, clone RP23-332O12, complete sequence Length = 195941 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tcatcagctgagattccctt 424 |||||||||||||||||||| Sbjct: 107257 tcatcagctgagattccctt 107276
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cctcgtcatcgtcggcggca 230 |||||||||||||||||||| Sbjct: 302688 cctcgtcatcgtcggcggca 302669
>ref|XM_754221.1| Ustilago maydis 521 hypothetical protein (UM03167.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtc 223 |||||||||||||||||||| Sbjct: 1748 tcgtcatcctcgtcatcgtc 1729
>ref|XM_754531.1| Ustilago maydis 521 hypothetical protein (UM03477.1) partial mRNA Length = 3900 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtc 223 |||||||||||||||||||| Sbjct: 1019 tcgtcatcctcgtcatcgtc 1000
>ref|XM_380961.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00785.1) partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcgtcatcctcgtcatcgtc 223 |||||||||||||||||||| Sbjct: 593 tcgtcatcctcgtcatcgtc 574
>gb|AF315713.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase mRNA, partial cds Length = 1767 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggc 229 |||||||||||||||||||| Sbjct: 323 tcctcgtcatcgtcggcggc 304
>emb|Z49967.1|CEF54C9 Caenorhabditis elegans Cosmid F54C9, complete sequence Length = 34842 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 tcatgtagtcagcaacatgc 503 |||||||||||||||||||| Sbjct: 16526 tcatgtagtcagcaacatgc 16507
>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence Length = 220746 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gttgagggcgttgagcctct 261 |||||||||||||||||||| Sbjct: 125822 gttgagggcgttgagcctct 125841
>gb|AF360281.1| Arabidopsis thaliana unknown protein (At5g10710) mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gacagaaaggaacaggtccg 126 |||||||||||||||||||| Sbjct: 776 gacagaaaggaacaggtccg 795
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aagacagaaaggaacaggtc 124 |||||||||||||||||||| Sbjct: 112990 aagacagaaaggaacaggtc 112971
>gb|BC037840.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4814643) Length = 1531 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tggttgatttggccatgcta 356 |||||||||||||||||||| Sbjct: 447 tggttgatttggccatgcta 466
>gb|AY043490.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg1) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggc 229 |||||||||||||||||||| Sbjct: 383 tcctcgtcatcgtcggcggc 364
>gb|BC047625.1| Homo sapiens cDNA clone IMAGE:4795909 Length = 2187 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 agcgtgaaccttcttgtaaactgc 397 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC036587.2| Homo sapiens cDNA clone IMAGE:4799072 Length = 2187 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 agcgtgaaccttcttgtaaactgc 397 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4811633), partial cds Length = 4424 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tggttgatttggccatgcta 356 |||||||||||||||||||| Sbjct: 3333 tggttgatttggccatgcta 3352
>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence Length = 177819 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 agcgtgaaccttcttgtaaactgc 397 ||||||||||||||||| |||||| Sbjct: 96341 agcgtgaaccttcttgtgaactgc 96318
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cttccatgtcatcagctgag 416 |||||||||||||||||||| Sbjct: 412 cttccatgtcatcagctgag 393
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 caagatacccaagacagaaa 114 |||||||||||||||||||| Sbjct: 53284 caagatacccaagacagaaa 53303
>gb|AY039230.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmgr) mRNA, complete cds Length = 2301 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggc 229 |||||||||||||||||||| Sbjct: 536 tcctcgtcatcgtcggcggc 517
>gb|AC020901.8|AC020901 Homo sapiens chromosome 5 clone CTC-527N11, complete sequence Length = 180636 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 caagatacccaagacagaaa 114 |||||||||||||||||||| Sbjct: 161539 caagatacccaagacagaaa 161558
>ref|NM_063410.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-5) (rpl-5) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 tcatgtagtcagcaacatgc 503 |||||||||||||||||||| Sbjct: 630 tcatgtagtcagcaacatgc 611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 actcgtcatcctcgtcatcgtcggcggc 229 ||||||| |||||||| ||||||||||| Sbjct: 24219624 actcgtcctcctcgtcgtcgtcggcggc 24219597
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cttccatgtcatcagctgag 416 |||||||||||||||||||| Sbjct: 26259382 cttccatgtcatcagctgag 26259363
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 actcgtcatcctcgtcatcgtcggcggc 229 ||||||| |||||||| ||||||||||| Sbjct: 549 actcgtcctcctcgtcgtcgtcggcggc 576
>emb|BX830763.1|CNS09ZHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gacagaaaggaacaggtccg 126 |||||||||||||||||||| Sbjct: 734 gacagaaaggaacaggtccg 753
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 ctcgtcatcctcgtcatcgtcggcggca 230 |||||| || |||||||||||||||||| Sbjct: 2243576 ctcgtcttcatcgtcatcgtcggcggca 2243603
>gb|BT002314.1| Arabidopsis thaliana clone C104667 unknown protein (At5g10710) mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gacagaaaggaacaggtccg 126 |||||||||||||||||||| Sbjct: 577 gacagaaaggaacaggtccg 596
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gagggcgttgagcctctcga 264 |||||||||||||||||||| Sbjct: 433386 gagggcgttgagcctctcga 433367
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cttccatgtcatcagctgag 416 |||||||||||||||||||| Sbjct: 82223 cttccatgtcatcagctgag 82204
>gb|AE005004.1| Halobacterium sp. NRC-1 section 35 of 170 of the complete genome Length = 11030 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tcctcgtcatcgtcggcggc 229 |||||||||||||||||||| Sbjct: 5096 tcctcgtcatcgtcggcggc 5077
>dbj|AB125365.1| Corvus macrorhynchos DRD4 gene for dopamine receptor D4, exon 1, partial cds Length = 182 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 tcatcctcgtcatcgtcggcggca 230 |||||||| ||||||||||||||| Sbjct: 61 tcatcctcctcatcgtcggcggca 84
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 actcgtcatcctcgtcatcgtcggcggc 229 ||||||| |||||||| ||||||||||| Sbjct: 543 actcgtcctcctcgtcgtcgtcggcggc 570
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cttccatgtcatcagctgag 416 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aagacagaaaggaacaggtc 124 |||||||||||||||||||| Sbjct: 168314 aagacagaaaggaacaggtc 168333
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 actcgtcatcctcgtcatcgtcggcggc 229 ||||||| |||||||| ||||||||||| Sbjct: 24147830 actcgtcctcctcgtcgtcgtcggcggc 24147803
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 actcgtcatcctcgtcatcgtcggcggc 229 ||||||| |||||||| ||||||||||| Sbjct: 104315 actcgtcctcctcgtcgtcgtcggcggc 104288
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 agcgtgaaccttcttgtaaactgc 397 |||||||||||| ||||||||||| Sbjct: 41652 agcgtgaaccttattgtaaactgc 41675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,064,061 Number of Sequences: 3902068 Number of extensions: 5064061 Number of successful extensions: 92953 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92401 Number of HSP's gapped (non-prelim): 495 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
