Clone Information

BLAST Search Result

Clone Name	rbags18d12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_193764.1\| Oryza sativa (japonica cultivar-group), predic...	383	e-103
2	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
3	dbj\|AP003213.3\| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
4	dbj\|AP003077.3\| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
5	dbj\|AK058499.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	383	e-103
6	gb\|AY104891.1\| Zea mays PCO129002 mRNA sequence	256	8e-65
7	gb\|AC144516.5\| Medicago truncatula clone mth2-28p22, complete se...	46	0.15
8	gb\|AC139747.15\| Medicago truncatula clone mth2-9j10, complete se...	46	0.15
9	gb\|AC151824.12\| Medicago truncatula clone mth2-45n18, complete s...	46	0.15
10	gb\|AC145218.29\| Medicago truncatula clone mth2-34l18, complete s...	46	0.15
11	gb\|AC133862.6\| Medicago truncatula clone mth2-30d7, complete seq...	46	0.15
12	gb\|AC124957.18\| Medicago truncatula clone mth2-15k14, complete s...	46	0.15
13	gb\|AC157502.2\| Medicago truncatula chromosome 7 BAC clone mte1-5...	46	0.15
14	gb\|AC157488.1\| Medicago truncatula chromosome 2 BAC clone mte1-3...	46	0.15
15	gb\|AC144541.12\| Medicago truncatula clone mth2-28a1, complete se...	44	0.58
16	gb\|AC122728.32\| Medicago truncatula clone mth2-22l4, complete se...	44	0.58
17	gb\|AC137078.24\| Medicago truncatula clone mth2-10e12, complete s...	44	0.58
18	emb\|AL606645.2\|OSJN00079 Oryza sativa genomic DNA, chromosome 4,...	44	0.58
19	dbj\|AP000570.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.58
20	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.58
21	gb\|AC073271.4\| Homo sapiens BAC clone RP11-541O14 from 2, comple...	44	0.58
22	dbj\|AP000492.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.58
23	gb\|AF163150.1\|AF163150 Glycine max acetyl-CoA carboxylase (accC-...	44	0.58
24	gb\|BC048175.1\| Mus musculus ClpB caseinolytic peptidase B homolo...	42	2.3
25	gb\|AC154354.2\| Mus musculus BAC clone RP23-203C5 from chromosome...	42	2.3
26	ref\|NM_009191.2\| Mus musculus ClpB caseinolytic peptidase B homo...	42	2.3
27	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	42	2.3
28	gb\|AY212544.1\| Uncultured bacterium clone w.1 16S ribosomal RNA ...	42	2.3
29	gb\|AC096855.5\| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic ...	42	2.3
30	gb\|AC183502.5\| Medicago truncatula clone mth2-75g17, complete se...	42	2.3
31	gb\|AC138133.26\| Medicago truncatula clone mth2-9o2, complete seq...	42	2.3
32	gb\|AC146564.2\| Medicago truncatula clone mth2-67l12, complete se...	42	2.3
33	gb\|AC149496.23\| Medicago truncatula clone mth2-119c5, complete s...	42	2.3
34	gb\|AC151666.15\| Medicago truncatula clone mth2-30n15, complete s...	42	2.3
35	gb\|AC157534.12\| Medicago truncatula clone mth2-50p19, complete s...	42	2.3
36	gb\|AC127168.17\| Medicago truncatula clone mth2-15m13, complete s...	42	2.3
37	gb\|AC137510.33\| Medicago truncatula clone mth2-8m7, complete seq...	42	2.3
38	gb\|AC145753.1\| Genomic sequence for Medicago truncatula, clone M...	42	2.3
39	dbj\|AK138593.1\| Mus musculus adult male spinal cord cDNA, RIKEN ...	42	2.3
40	dbj\|AK141383.1\| Mus musculus 7 days embryo whole body cDNA, RIKE...	42	2.3
41	gb\|AC090567.7\| Homo sapiens chromosome 8, clone RP11-18L2, compl...	42	2.3
42	dbj\|AK161996.1\| Mus musculus 12 days embryo male wolffian duct i...	42	2.3
43	gb\|AC159005.3\| Mus musculus BAC clone RP23-67F4 from chromosome ...	42	2.3
44	gb\|AC158388.2\| Mus musculus BAC clone RP24-545I9 from chromosome...	42	2.3
45	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
46	emb\|CR962123.2\| Medicago truncatula chromosome 5 clone mth2-167a...	42	2.3
47	emb\|CT009655.2\| Medicago truncatula chromosome 5 clone mth2-121g...	42	2.3
48	dbj\|AP004949.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	42	2.3
49	gb\|AF521177.1\| Hordeum vulgare contig 211252, complete sequence	40	9.1
50	gb\|AC135569.6\| Oryza sativa (japonica cultivar-group) chromosome...	40	9.1
51	emb\|CR538723.1\| M.truncatula DNA sequence from clone MTH2-27D24 ...	40	9.1
52	gb\|AC125459.4\| Mus musculus BAC clone RP24-418N13 from chromosom...	40	9.1
53	emb\|AL606594.4\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	40	9.1
54	gb\|AC161399.2\| Medicago truncatula chromosome 2 BAC clone mte1-3...	40	9.1
55	gb\|AC145023.4\| Medicago truncatula clone mth2-30j24, complete se...	40	9.1
56	gb\|AC146709.11\| Medicago truncatula clone mth2-90m14, complete s...	40	9.1
57	gb\|AC148405.5\| Medicago truncatula clone mth2-37m7, complete seq...	40	9.1
58	gb\|AC138063.11\| Medicago truncatula clone mth2-12h1, complete se...	40	9.1
59	gb\|AC148292.8\| Medicago truncatula clone mth2-15m24, complete se...	40	9.1
60	gb\|AC124217.21\| Medicago truncatula clone mth2-36d22, complete s...	40	9.1
61	emb\|AL161730.9\| Human DNA sequence from clone RP11-441I5 on chro...	40	9.1
62	emb\|CR354594.13\| Zebrafish DNA sequence from clone DKEY-173F1 in...	40	9.1
63	gb\|AC146864.23\| Medicago truncatula clone mth2-175n24, complete ...	40	9.1
64	gb\|AC131248.14\| Medicago truncatula clone mth2-28n22, complete s...	40	9.1
65	gb\|AC060232.6\| Homo sapiens chromosome 10 clone RP11-458D17, com...	40	9.1
66	gb\|AE010183.1\| Pyrococcus furiosus DSM 3638, section 58 of 173 o...	40	9.1
67	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
68	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
69	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
70	dbj\|AP002872.2\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
71	dbj\|AP005821.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
72	dbj\|AP005830.4\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
73	dbj\|AP006479.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
74	emb\|BX510913.9\| Zebrafish DNA sequence from clone CH211-202D4 in...	40	9.1
75	emb\|AL442115.2\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	40	9.1
76	emb\|CT573218.4\| CH250-10B18, complete sequence	40	9.1
77	emb\|CT573028.11\| M.truncatula DNA sequence from clone MTH2-51N20...	40	9.1
78	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	9.1
79	emb\|CR962128.2\| Medicago truncatula chromosome 5 clone mth2-2o11...	40	9.1
80	emb\|CT030158.4\| M.truncatula DNA sequence from clone MTH2-49E10 ...	40	9.1
81	emb\|CR940308.12\| M.truncatula DNA sequence from clone MTH2-17G23...	40	9.1
82	gb\|AY833548.1\| Pisum sativum transposon Stowaway MITEs Stow-Ps16...	40	9.1
83	emb\|AL607142.16\| Mouse DNA sequence from clone RP23-98J9 on chro...	40	9.1

>ref|NM_193764.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 777

 Score =  383 bits (193), Expect = e-103
 Identities = 322/365 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 cgaagtttctccttcactgaatacttcttggcagcgtctcgcaccttttcaatatatcct 354
           ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 773 cgaagtttctccttcacagaatacttcttggcagcatcccgcaccttttcaatataccct 714

                                                                       
Query: 355 tcaattggcggcgtgagcgttgccatgtagcggtttgcagggaaaggggtcatgtcagga 414
           |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 713 tcaattggtggcgtgagtgttgccatgtatcggtttgcagggaatggtgtcatgtcagga 654

                                                                       
Query: 415 accatagcagcagctcgcagcttctcaggtagtgcagcaatggcctccttcttgagcctc 474
           | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || 
Sbjct: 653 atcatagcagcagctcgcagcttctcagggagtgctgcaatggcctccttcttgagactt 594

                                                                       
Query: 475 aacagcgttgactctgcagtttgacgtgcgcggtgtcgtcgcattagcacacggctgtat 534
           |  || |  || ||||||||||| ||||||||||| ||||||||||||||  | ||||||
Sbjct: 593 agaagagacgattctgcagtttgccgtgcgcggtgccgtcgcattagcacctgactgtat 534

                                                                       
Query: 535 tctttggcaagacgccgtccatcttcaactgtcagctcatactcagggatagcctcctca 594
           | ||||||||| ||||| |||||||| ||||||||||| || | |||||| || ||||||
Sbjct: 533 tgtttggcaagtcgccggccatcttcgactgtcagctcgtatttagggattgcgtcctca 474

                                                                       
Query: 595 tctaccaggccaagactgatataatcaaggcctggcggacccatcagaacacggtcacca 654
           || ||||  ||||||||||| || ||||| ||||| ||||||||||| |||||| |||||
Sbjct: 473 tcaaccaatccaagactgatgtagtcaagacctggtggacccatcagcacacggccacca 414

                
Query: 655 tcacc 659
           |||||
Sbjct: 413 tcacc 409

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  383 bits (193), Expect = e-103
 Identities = 322/365 (88%)
 Strand = Plus / Plus

                                                                            
Query: 295      cgaagtttctccttcactgaatacttcttggcagcgtctcgcaccttttcaatatatcct 354
                ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 17991787 cgaagtttctccttcacagaatacttcttggcagcatcccgcaccttttcaatataccct 17991846

                                                                            
Query: 355      tcaattggcggcgtgagcgttgccatgtagcggtttgcagggaaaggggtcatgtcagga 414
                |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 17991847 tcaattggtggcgtgagtgttgccatgtatcggtttgcagggaatggtgtcatgtcagga 17991906

                                                                            
Query: 415      accatagcagcagctcgcagcttctcaggtagtgcagcaatggcctccttcttgagcctc 474
                | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || 
Sbjct: 17991907 atcatagcagcagctcgcagcttctcagggagtgctgcaatggcctccttcttgagactt 17991966

                                                                            
Query: 475      aacagcgttgactctgcagtttgacgtgcgcggtgtcgtcgcattagcacacggctgtat 534
                |  || |  || ||||||||||| ||||||||||| ||||||||||||||  | ||||||
Sbjct: 17991967 agaagagacgattctgcagtttgccgtgcgcggtgccgtcgcattagcacctgactgtat 17992026

                                                                            
Query: 535      tctttggcaagacgccgtccatcttcaactgtcagctcatactcagggatagcctcctca 594
                | ||||||||| ||||| |||||||| ||||||||||| || | |||||| || ||||||
Sbjct: 17992027 tgtttggcaagtcgccggccatcttcgactgtcagctcgtatttagggattgcgtcctca 17992086

                                                                            
Query: 595      tctaccaggccaagactgatataatcaaggcctggcggacccatcagaacacggtcacca 654
                || ||||  ||||||||||| || ||||| ||||| ||||||||||| |||||| |||||
Sbjct: 17992087 tcaaccaatccaagactgatgtagtcaagacctggtggacccatcagcacacggccacca 17992146

                     
Query: 655      tcacc 659
                |||||
Sbjct: 17992147 tcacc 17992151



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 54      tgattaaaaaggaatggagggagtaa 79
               ||||||||| ||||||||||||||||
Sbjct: 8430221 tgattaaaatggaatggagggagtaa 8430196



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      ggaatggagggagtaaaact 83
               ||||||||||||||||||||
Sbjct: 2494261 ggaatggagggagtaaaact 2494242

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>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0054L14
          Length = 150022

 Score =  383 bits (193), Expect = e-103
 Identities = 322/365 (88%)
 Strand = Plus / Plus

                                                                         
Query: 295   cgaagtttctccttcactgaatacttcttggcagcgtctcgcaccttttcaatatatcct 354
             ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 19028 cgaagtttctccttcacagaatacttcttggcagcatcccgcaccttttcaatataccct 19087

                                                                         
Query: 355   tcaattggcggcgtgagcgttgccatgtagcggtttgcagggaaaggggtcatgtcagga 414
             |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 19088 tcaattggtggcgtgagtgttgccatgtatcggtttgcagggaatggtgtcatgtcagga 19147

                                                                         
Query: 415   accatagcagcagctcgcagcttctcaggtagtgcagcaatggcctccttcttgagcctc 474
             | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || 
Sbjct: 19148 atcatagcagcagctcgcagcttctcagggagtgctgcaatggcctccttcttgagactt 19207

                                                                         
Query: 475   aacagcgttgactctgcagtttgacgtgcgcggtgtcgtcgcattagcacacggctgtat 534
             |  || |  || ||||||||||| ||||||||||| ||||||||||||||  | ||||||
Sbjct: 19208 agaagagacgattctgcagtttgccgtgcgcggtgccgtcgcattagcacctgactgtat 19267

                                                                         
Query: 535   tctttggcaagacgccgtccatcttcaactgtcagctcatactcagggatagcctcctca 594
             | ||||||||| ||||| |||||||| ||||||||||| || | |||||| || ||||||
Sbjct: 19268 tgtttggcaagtcgccggccatcttcgactgtcagctcgtatttagggattgcgtcctca 19327

                                                                         
Query: 595   tctaccaggccaagactgatataatcaaggcctggcggacccatcagaacacggtcacca 654
             || ||||  ||||||||||| || ||||| ||||| ||||||||||| |||||| |||||
Sbjct: 19328 tcaaccaatccaagactgatgtagtcaagacctggtggacccatcagcacacggccacca 19387

                  
Query: 655   tcacc 659
             |||||
Sbjct: 19388 tcacc 19392

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>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0520B06
          Length = 142667

 Score =  383 bits (193), Expect = e-103
 Identities = 322/365 (88%)
 Strand = Plus / Plus

                                                                          
Query: 295    cgaagtttctccttcactgaatacttcttggcagcgtctcgcaccttttcaatatatcct 354
              ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 111622 cgaagtttctccttcacagaatacttcttggcagcatcccgcaccttttcaatataccct 111681

                                                                          
Query: 355    tcaattggcggcgtgagcgttgccatgtagcggtttgcagggaaaggggtcatgtcagga 414
              |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 111682 tcaattggtggcgtgagtgttgccatgtatcggtttgcagggaatggtgtcatgtcagga 111741

                                                                          
Query: 415    accatagcagcagctcgcagcttctcaggtagtgcagcaatggcctccttcttgagcctc 474
              | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || 
Sbjct: 111742 atcatagcagcagctcgcagcttctcagggagtgctgcaatggcctccttcttgagactt 111801

                                                                          
Query: 475    aacagcgttgactctgcagtttgacgtgcgcggtgtcgtcgcattagcacacggctgtat 534
              |  || |  || ||||||||||| ||||||||||| ||||||||||||||  | ||||||
Sbjct: 111802 agaagagacgattctgcagtttgccgtgcgcggtgccgtcgcattagcacctgactgtat 111861

                                                                          
Query: 535    tctttggcaagacgccgtccatcttcaactgtcagctcatactcagggatagcctcctca 594
              | ||||||||| ||||| |||||||| ||||||||||| || | |||||| || ||||||
Sbjct: 111862 tgtttggcaagtcgccggccatcttcgactgtcagctcgtatttagggattgcgtcctca 111921

                                                                          
Query: 595    tctaccaggccaagactgatataatcaaggcctggcggacccatcagaacacggtcacca 654
              || ||||  ||||||||||| || ||||| ||||| ||||||||||| |||||| |||||
Sbjct: 111922 tcaaccaatccaagactgatgtagtcaagacctggtggacccatcagcacacggccacca 111981

                   
Query: 655    tcacc 659
              |||||
Sbjct: 111982 tcacc 111986

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>dbj|AK058499.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F02, full
            insert sequence
          Length = 1470

 Score =  383 bits (193), Expect = e-103
 Identities = 322/365 (88%)
 Strand = Plus / Minus

                                                                        
Query: 295  cgaagtttctccttcactgaatacttcttggcagcgtctcgcaccttttcaatatatcct 354
            ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 1152 cgaagtttctccttcacagaatacttcttggcagcatcccgcaccttttcaatataccct 1093

                                                                        
Query: 355  tcaattggcggcgtgagcgttgccatgtagcggtttgcagggaaaggggtcatgtcagga 414
            |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1092 tcaattggtggcgtgagtgttgccatgtatcggtttgcagggaatggtgtcatgtcagga 1033

                                                                        
Query: 415  accatagcagcagctcgcagcttctcaggtagtgcagcaatggcctccttcttgagcctc 474
            | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || 
Sbjct: 1032 atcatagcagcagctcgcagcttctcagggagtgctgcaatggcctccttcttgagactt 973

                                                                        
Query: 475  aacagcgttgactctgcagtttgacgtgcgcggtgtcgtcgcattagcacacggctgtat 534
            |  || |  || ||||||||||| ||||||||||| ||||||||||||||  | ||||||
Sbjct: 972  agaagagacgattctgcagtttgccgtgcgcggtgccgtcgcattagcacctgactgtat 913

                                                                        
Query: 535  tctttggcaagacgccgtccatcttcaactgtcagctcatactcagggatagcctcctca 594
            | ||||||||| ||||| |||||||| ||||||||||| || | |||||| || ||||||
Sbjct: 912  tgtttggcaagtcgccggccatcttcgactgtcagctcgtatttagggattgcgtcctca 853

                                                                        
Query: 595  tctaccaggccaagactgatataatcaaggcctggcggacccatcagaacacggtcacca 654
            || ||||  ||||||||||| || ||||| ||||| ||||||||||| |||||| |||||
Sbjct: 852  tcaaccaatccaagactgatgtagtcaagacctggtggacccatcagcacacggccacca 793

                 
Query: 655  tcacc 659
            |||||
Sbjct: 792  tcacc 788

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>gb|AY104891.1| Zea mays PCO129002 mRNA sequence
          Length = 952

 Score =  256 bits (129), Expect = 8e-65
 Identities = 287/340 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318 cttcttggcagcgtctcgcaccttttcaatatatccttcaattggcggcgtgagcgttgc 377
           ||||||||| || || ||||| ||||||||||| ||||||||||| || ||||| || ||
Sbjct: 945 cttcttggccgcttcccgcactttttcaatatanccttcaattggtggtgtgagtgtcgc 886

                                                                       
Query: 378 catgtagcggtttgcagggaaaggggtcatgtcaggaaccatagcagcagctcgcagctt 437
           |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| |||||
Sbjct: 885 catgtaccggtttgcagggaacggtgtcatgtcaggtaccatagcagcagctcgtagctt 826

                                                                       
Query: 438 ctcaggtagtgcagcaatggcctccttcttgagcctcaacagcgttgactctgcagtttg 497
           |||||| || ||| ||| ||||||||| || ||  | |  ||| |||||||||| |||||
Sbjct: 825 ctcagggagagcatcaacggcctccttttttagggttagaagcattgactctgctgtttg 766

                                                                       
Query: 498 acgtgcgcggtgtcgtcgcattagcacacggctgtattctttggcaagacgccgtccatc 557
            | ||| ||||| || |||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 765 ccttgcacggtgccgccgcattagtacacgactgtattctttagcaagtcgccgaccatc 706

                                                                       
Query: 558 ttcaactgtcagctcatactcagggatagcctcctcatctaccaggccaagactgatata 617
            || ||||| || |||||||  ||||| ||||||||||| || || ||||||||||||||
Sbjct: 705 ctcgactgtgagttcatacttggggattgcctcctcatcaactagcccaagactgatata 646

                                                   
Query: 618 atcaaggcctggcggacccatcagaacacggtcaccatca 657
            |||||||| || |||||||| || |||||||| ||||||
Sbjct: 645 gtcaaggcccggtggacccataagcacacggtctccatca 606

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>gb|AC144516.5| Medicago truncatula clone mth2-28p22, complete sequence
          Length = 111130

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 56     attaaaaaggaatggagggagta 78
              |||||||||||||||||||||||
Sbjct: 110170 attaaaaaggaatggagggagta 110192

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>gb|AC139747.15| Medicago truncatula clone mth2-9j10, complete sequence
          Length = 105246

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 57    ttaaaaaggaatggagggagtaa 79
             |||||||||||||||||||||||
Sbjct: 19165 ttaaaaaggaatggagggagtaa 19143

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>gb|AC151824.12| Medicago truncatula clone mth2-45n18, complete sequence
          Length = 99140

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 56    attaaaaaggaatggagggagta 78
             |||||||||||||||||||||||
Sbjct: 58007 attaaaaaggaatggagggagta 57985

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>gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete sequence
          Length = 134519

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 56    attaaaaaggaatggagggagta 78
             |||||||||||||||||||||||
Sbjct: 80566 attaaaaaggaatggagggagta 80588

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>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 57    ttaaaaaggaatggagggagtaa 79
             |||||||||||||||||||||||
Sbjct: 14444 ttaaaaaggaatggagggagtaa 14422

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>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 57     ttaaaaaggaatggagggagtaa 79
              |||||||||||||||||||||||
Sbjct: 131059 ttaaaaaggaatggagggagtaa 131081

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>gb|AC157502.2| Medicago truncatula chromosome 7 BAC clone mte1-56e23, complete
             sequence
          Length = 108844

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 56    attaaaaaggaatggagggagta 78
             |||||||||||||||||||||||
Sbjct: 92207 attaaaaaggaatggagggagta 92185

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>gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-33n12, complete
             sequence
          Length = 93219

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 56    attaaaaaggaatggagggagta 78
             |||||||||||||||||||||||
Sbjct: 25595 attaaaaaggaatggagggagta 25617

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>gb|AC144541.12| Medicago truncatula clone mth2-28a1, complete sequence
          Length = 123800

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 58    taaaaaggaatggagggagtaa 79
             ||||||||||||||||||||||
Sbjct: 38073 taaaaaggaatggagggagtaa 38094

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>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence
          Length = 102937

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 57    ttaaaaaggaatggagggagta 78
             ||||||||||||||||||||||
Sbjct: 89807 ttaaaaaggaatggagggagta 89828

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>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence
          Length = 144306

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 60    aaaaggaatggagggagtaaaa 81
             ||||||||||||||||||||||
Sbjct: 96458 aaaaggaatggagggagtaaaa 96437

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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 54    tgattaaaaaggaatggagggagtaa 79
             ||||||||| ||||||||||||||||
Sbjct: 94413 tgattaaaatggaatggagggagtaa 94438

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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0711E10
          Length = 157903

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 54   tgattaaaaaggaatggagggagtaa 79
            ||||||||| ||||||||||||||||
Sbjct: 5374 tgattaaaatggaatggagggagtaa 5349

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 54       tgattaaaaaggaatggagggagtaa 79
                ||||||||| ||||||||||||||||
Sbjct: 31761143 tgattaaaatggaatggagggagtaa 31761168



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 59       aaaaaggaatggagggagta 78
                ||||||||||||||||||||
Sbjct: 24946258 aaaaaggaatggagggagta 24946277

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>gb|AC073271.4| Homo sapiens BAC clone RP11-541O14 from 2, complete sequence
          Length = 117930

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 117   gatcttgcaaataaaaattgtg 138
             ||||||||||||||||||||||
Sbjct: 44023 gatcttgcaaataaaaattgtg 44002

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>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 54    tgattaaaaaggaatggagggagtaa 79
             ||||||||| ||||||||||||||||
Sbjct: 45176 tgattaaaatggaatggagggagtaa 45151

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>gb|AF163150.1|AF163150 Glycine max acetyl-CoA carboxylase (accC-3) gene, complete cds;
           nuclear gene for chloroplast product
          Length = 9180

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 57  ttaaaaaggaatggagggagta 78
           ||||||||||||||||||||||
Sbjct: 104 ttaaaaaggaatggagggagta 83

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>gb|BC048175.1| Mus musculus ClpB caseinolytic peptidase B homolog (E. coli), mRNA
            (cDNA clone MGC:61172 IMAGE:6825472), complete cds
          Length = 4509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    gcacaaagtagcctcaaactt 21
            |||||||||||||||||||||
Sbjct: 3702 gcacaaagtagcctcaaactt 3682

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>gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome 14, complete
            sequence
          Length = 238278

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  gcagggaaaggggtcatgtca 411
            |||||||||||||||||||||
Sbjct: 1151 gcagggaaaggggtcatgtca 1131

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>ref|NM_009191.2| Mus musculus ClpB caseinolytic peptidase B homolog (E. coli) (Clpb),
            mRNA
          Length = 4509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    gcacaaagtagcctcaaactt 21
            |||||||||||||||||||||
Sbjct: 3702 gcacaaagtagcctcaaactt 3682

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 15       caaactttacaaagtttgact 35
                |||||||||||||||||||||
Sbjct: 30146706 caaactttacaaagtttgact 30146726

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>gb|AY212544.1| Uncultured bacterium clone w.1 16S ribosomal RNA gene, partial
           sequence
          Length = 694

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 569 gctcatactcagggatagcct 589
           |||||||||||||||||||||
Sbjct: 107 gctcatactcagggatagcct 127

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>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete
             sequence
          Length = 163972

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    caaactttacaaagtttgact 35
             |||||||||||||||||||||
Sbjct: 77189 caaactttacaaagtttgact 77169

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>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence
          Length = 121928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     aaaggaatggagggagtaaaa 81
              |||||||||||||||||||||
Sbjct: 113874 aaaggaatggagggagtaaaa 113854

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>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence
          Length = 149166

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    taaaaaggaatggagggagta 78
             |||||||||||||||||||||
Sbjct: 49073 taaaaaggaatggagggagta 49053

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>gb|AC146564.2| Medicago truncatula clone mth2-67l12, complete sequence
          Length = 128650

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 55    gattaaaaaggaatggagggagtaa 79
             ||||||||||||| |||||||||||
Sbjct: 68691 gattaaaaaggaacggagggagtaa 68667

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>gb|AC149496.23| Medicago truncatula clone mth2-119c5, complete sequence
          Length = 115576

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     taaaaaggaatggagggagta 78
              |||||||||||||||||||||
Sbjct: 100939 taaaaaggaatggagggagta 100919

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>gb|AC151666.15| Medicago truncatula clone mth2-30n15, complete sequence
          Length = 116410

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    aaaggaatggagggagtaaaa 81
             |||||||||||||||||||||
Sbjct: 86259 aaaggaatggagggagtaaaa 86279

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>gb|AC157534.12| Medicago truncatula clone mth2-50p19, complete sequence
          Length = 116410

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    aaaggaatggagggagtaaaa 81
             |||||||||||||||||||||
Sbjct: 86259 aaaggaatggagggagtaaaa 86279

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>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence
          Length = 117770

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 57    ttaaaaaggaatggagggagtaaaa 81
             ||||||||||| |||||||||||||
Sbjct: 55063 ttaaaaaggaacggagggagtaaaa 55087

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>gb|AC137510.33| Medicago truncatula clone mth2-8m7, complete sequence
          Length = 108759

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 55    gattaaaaaggaatggagggagtaa 79
             ||||||||||||| |||||||||||
Sbjct: 48798 gattaaaaaggaacggagggagtaa 48774

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>gb|AC145753.1| Genomic sequence for Medicago truncatula, clone MTABa0058M19, complete
             sequence
          Length = 101565

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 57    ttaaaaaggaatggagggagtaaaa 81
             ||||||||||| |||||||||||||
Sbjct: 59243 ttaaaaaggaacggagggagtaaaa 59219

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>dbj|AK138593.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330072F24 product:suppressor of K+
            transport defect 3, full insert sequence
          Length = 4001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    gcacaaagtagcctcaaactt 21
            |||||||||||||||||||||
Sbjct: 3740 gcacaaagtagcctcaaactt 3720

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>dbj|AK141383.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430045J16 product:suppressor of
            K+ transport defect 3, full insert sequence
          Length = 4252

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    gcacaaagtagcctcaaactt 21
            |||||||||||||||||||||
Sbjct: 3711 gcacaaagtagcctcaaactt 3691

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>gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, complete sequence
          Length = 182622

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 59     aaaaaggaatggagggagtaa 79
              |||||||||||||||||||||
Sbjct: 112688 aaaaaggaatggagggagtaa 112668

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>dbj|AK161996.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720441C16 product:suppressor of K+ transport
            defect 3, full insert sequence
          Length = 3103

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    gcacaaagtagcctcaaactt 21
            |||||||||||||||||||||
Sbjct: 1603 gcacaaagtagcctcaaactt 1583

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>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence
          Length = 230018

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     gcacaaagtagcctcaaactt 21
             |||||||||||||||||||||
Sbjct: 67599 gcacaaagtagcctcaaactt 67619

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>gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome 14, complete sequence
          Length = 183148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 391   gcagggaaaggggtcatgtca 411
             |||||||||||||||||||||
Sbjct: 43234 gcagggaaaggggtcatgtca 43254

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 15       caaactttacaaagtttgact 35
                |||||||||||||||||||||
Sbjct: 30238128 caaactttacaaagtttgact 30238148

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>emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a19, COMPLETE SEQUENCE
          Length = 128818

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    aaaaggaatggagggagtaaa 80
             |||||||||||||||||||||
Sbjct: 48969 aaaaggaatggagggagtaaa 48949

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>emb|CT009655.2| Medicago truncatula chromosome 5 clone mth2-121g11, COMPLETE SEQUENCE
          Length = 126690

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 57    ttaaaaaggaatggagggagtaaaa 81
             ||||||||||| |||||||||||||
Sbjct: 80803 ttaaaaaggaacggagggagtaaaa 80779

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>dbj|AP004949.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45F11, TM0122,
             complete sequence
          Length = 90864

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    taaaaaggaatggagggagta 78
             |||||||||||||||||||||
Sbjct: 36801 taaaaaggaatggagggagta 36781

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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    caaactttacaaagtttgac 34
             ||||||||||||||||||||
Sbjct: 59827 caaactttacaaagtttgac 59846

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>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0018F17, complete sequence
          Length = 104291

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    tcaaactttacaaagtttgacttc 37
             ||||| ||||||||||||||||||
Sbjct: 35376 tcaaaatttacaaagtttgacttc 35353

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>emb|CR538723.1| M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3,
             complete sequence
          Length = 106695

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    aaaaggaatggagggagtaa 79
             ||||||||||||||||||||
Sbjct: 60903 aaaaggaatggagggagtaa 60922

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>gb|AC125459.4| Mus musculus BAC clone RP24-418N13 from chromosome 8, complete sequence
          Length = 194237

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 404   tcatgtcaggaaccatagcagcag 427
             |||||||||||| |||||||||||
Sbjct: 69398 tcatgtcaggaatcatagcagcag 69421

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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaaaaggaatggagggagta 78
             ||||||||||||||||||||
Sbjct: 66843 aaaaaggaatggagggagta 66862

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>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
          Length = 172016

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     aaaaggaatggagggagtaa 79
              ||||||||||||||||||||
Sbjct: 104584 aaaaggaatggagggagtaa 104565

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>gb|AC145023.4| Medicago truncatula clone mth2-30j24, complete sequence
          Length = 90381

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    gattaaaaaggaatggagggagta 78
             ||||||||||||| ||||||||||
Sbjct: 38141 gattaaaaaggaacggagggagta 38164

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>gb|AC146709.11| Medicago truncatula clone mth2-90m14, complete sequence
          Length = 110472

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaaggaatggagggagtaa 79
             ||||||||||||||||||||
Sbjct: 25653 aaaaggaatggagggagtaa 25634

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>gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete sequence
          Length = 115984

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aaaaaggaatggagggagta 78
             ||||||||||||||||||||
Sbjct: 82345 aaaaaggaatggagggagta 82326

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>gb|AC138063.11| Medicago truncatula clone mth2-12h1, complete sequence
          Length = 104547

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 56     attaaaaaggaatggagggagtaa 79
              |||||||||||| |||||||||||
Sbjct: 101652 attaaaaaggaacggagggagtaa 101629

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>gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete sequence
          Length = 120077

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 57    ttaaaaaggaatggagggagtaaa 80
             ||||||||||| ||||||||||||
Sbjct: 71984 ttaaaaaggaacggagggagtaaa 72007

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>gb|AC124217.21| Medicago truncatula clone mth2-36d22, complete sequence
          Length = 133899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 57   ttaaaaaggaatggagggagtaaa 80
            ||||||||||| ||||||||||||
Sbjct: 3393 ttaaaaaggaacggagggagtaaa 3416

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>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the
             DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG
             island, complete sequence
          Length = 170066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   tcaacgaagtttctccttcactga 314
             |||||||||| |||||||||||||
Sbjct: 64566 tcaacgaagtctctccttcactga 64543

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>emb|CR354594.13| Zebrafish DNA sequence from clone DKEY-173F1 in linkage group 13,
            complete sequence
          Length = 196408

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  tcttgcaaataaaaattgtg 138
            ||||||||||||||||||||
Sbjct: 3119 tcttgcaaataaaaattgtg 3100

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>gb|AC146864.23| Medicago truncatula clone mth2-175n24, complete sequence
          Length = 113106

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   attaaaaaggaatggagggagtaa 79
            |||||||||||| |||||||||||
Sbjct: 2896 attaaaaaggaacggagggagtaa 2919

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>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence
          Length = 136333

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaaggaatggagggagtaa 79
             ||||||||||||||||||||
Sbjct: 39982 aaaaggaatggagggagtaa 39963

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>gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, complete sequence
          Length = 167912

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   tcaacgaagtttctccttcactga 314
             |||||||||| |||||||||||||
Sbjct: 62412 tcaacgaagtctctccttcactga 62389

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>gb|AE010183.1| Pyrococcus furiosus DSM 3638, section 58 of 173 of the complete genome
          Length = 13072

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   tttcaatatatccttcaatt 360
             ||||||||||||||||||||
Sbjct: 10276 tttcaatatatccttcaatt 10295

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 14       tcaaactttacaaagtttgacttc 37
                ||||| ||||||||||||||||||
Sbjct: 17061420 tcaaaatttacaaagtttgacttc 17061397

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 64     ggaatggagggagtaaaactgaagtgaa 91
              ||||||||||||||| ||||||| ||||
Sbjct: 595343 ggaatggagggagtacaactgaattgaa 595316

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 14       tcaaactttacaaagtttga 33
                ||||||||||||||||||||
Sbjct: 11597187 tcaaactttacaaagtttga 11597168

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>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0416D03
          Length = 157112

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    ggaatggagggagtaaaact 83
             ||||||||||||||||||||
Sbjct: 48682 ggaatggagggagtaaaact 48663

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>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0094B20
          Length = 146270

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 64    ggaatggagggagtaaaactgaagtgaa 91
             ||||||||||||||| ||||||| ||||
Sbjct: 48353 ggaatggagggagtacaactgaattgaa 48326

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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tcaaactttacaaagtttga 33
              ||||||||||||||||||||
Sbjct: 160845 tcaaactttacaaagtttga 160826

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>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1272H04
          Length = 87113

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tcaaactttacaaagtttga 33
             ||||||||||||||||||||
Sbjct: 42559 tcaaactttacaaagtttga 42540

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>emb|BX510913.9| Zebrafish DNA sequence from clone CH211-202D4 in linkage group 22,
             complete sequence
          Length = 203952

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 355   tcaattggcggcgtgagcgttgcc 378
             |||||||||||||| |||||||||
Sbjct: 39319 tcaattggcggcgtcagcgttgcc 39296

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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaaaaggaatggagggagta 78
             ||||||||||||||||||||
Sbjct: 74549 aaaaaggaatggagggagta 74568

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>emb|CT573218.4| CH250-10B18, complete sequence
          Length = 190487

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   tcaacgaagtttctccttcactga 314
             |||||||||| |||||||||||||
Sbjct: 72758 tcaacgaagtgtctccttcactga 72781

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>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3,
             complete sequence
          Length = 116350

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaaggaatggagggagtaa 79
             ||||||||||||||||||||
Sbjct: 91092 aaaaggaatggagggagtaa 91073

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 14       tcaaactttacaaagtttgacttc 37
                ||||| ||||||||||||||||||
Sbjct: 17156101 tcaaaatttacaaagtttgacttc 17156078

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>emb|CR962128.2| Medicago truncatula chromosome 5 clone mth2-2o11, COMPLETE SEQUENCE
          Length = 136557

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaaaaggaatggagggagta 78
             ||||||||||||||||||||
Sbjct: 95654 aaaaaggaatggagggagta 95673



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaaggaatggagggagtaa 79
             ||||||||||||||||||||
Sbjct: 95414 aaaaggaatggagggagtaa 95395

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>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3,
             complete sequence
          Length = 122591

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    attaaaaaggaatggagggagtaa 79
             |||||||||||| |||||||||||
Sbjct: 13258 attaaaaaggaacggagggagtaa 13281

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>emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23 on chromosome 3,
             complete sequence
          Length = 121494

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    attaaaaaggaatggagggagtaa 79
             |||||||||||| |||||||||||
Sbjct: 58810 attaaaaaggaacggagggagtaa 58787

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>gb|AY833548.1| Pisum sativum transposon Stowaway MITEs Stow-Ps16 and Stow-Ps17,
           complete sequence
          Length = 1268

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  ttaaaaaggaatggagggagtaaa 80
           ||||||||||| ||||||||||||
Sbjct: 763 ttaaaaaggaacggagggagtaaa 786

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>emb|AL607142.16| Mouse DNA sequence from clone RP23-98J9 on chromosome 4, complete
              sequence
          Length = 188716

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    aaagactctttcctcccctg 282
              ||||||||||||||||||||
Sbjct: 154383 aaagactctttcctcccctg 154402


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,926,371
Number of Sequences: 3902068
Number of extensions: 5926371
Number of successful extensions: 118141
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117351
Number of HSP's gapped (non-prelim): 789
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result