ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18c20 |
|---|---|
| Clone Library Name | barley_pub |
>JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1)| (Mitsugumin-72) (Mg72) Length = 662 Score = 35.4 bits (80), Expect = 0.14 Identities = 26/78 (33%), Positives = 38/78 (48%) Frame = +2 Query: 359 LTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSR 538 L S HG+ V H+ + P ++ S+PS S+ V KP+PNK S PK+ KP+ Sbjct: 547 LHSQYHGYY-VKLHAPQHPPVDAEDDDRSSPS-SSALVHKPSPNKWSPPKSVTKPVAKES 604 Query: 539 HPTGSILKAVVVKPHQPA 592 K+ + P PA Sbjct: 605 KAEPKAKKSELAIPKNPA 622
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 33.5 bits (75), Expect = 0.55 Identities = 25/85 (29%), Positives = 38/85 (44%) Frame = +2 Query: 332 APLLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKA 511 +PL T + SS + S ++Y+P+ P PSP + V+ P ++P Sbjct: 3707 SPLASPTTRVLSSSN--SPTTSKVNSYQPRNQQ--VPQQPSPKSVAEVQTTPQLMTIPLQ 3762 Query: 512 PCKPLPPSRHPTGSILKAVVVKPHQ 586 P+ HPT I K V V+P Q Sbjct: 3763 KMTPIQVPHHPT-IISKVVTVQPQQ 3786
>CRC_ARATH (Q8L925) Protein CRABS CLAW| Length = 181 Score = 33.5 bits (75), Expect = 0.55 Identities = 21/59 (35%), Positives = 23/59 (38%) Frame = +2 Query: 335 PLLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKA 511 P LQ SLT F G + + S PSPS VVKP K LP A Sbjct: 63 PPLQGHVSLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPSA 121
>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687| Length = 1237 Score = 33.1 bits (74), Expect = 0.71 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +2 Query: 425 SDRGPPSTPSPSNE*VVKPNPNKASLPKA----PCKPLPPSRHPTGSILKAVVVKPHQPA 592 SD PPS PSP+ E + P P +S A P P S P G+ LK PH P Sbjct: 174 SDPLPPSAPSPTREGALTPPPFPSSFELAQENGPGMQPPVSSPPLGA-LKQESCSPHHPQ 232 Query: 593 I 595 + Sbjct: 233 V 233
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 33.1 bits (74), Expect = 0.71 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = +2 Query: 416 PQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKPHQPAI 595 P+ +R P P P E V P P + P P + LPP+ P K V +PA Sbjct: 19 PEPVERPPTPPPPPPEESVAPPPPPEVVAPPPPPEDLPPAPPPPEPKKKKVGWGAKKPAA 78 Query: 596 T 598 T Sbjct: 79 T 79
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 33.1 bits (74), Expect = 0.71 Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Frame = +2 Query: 347 APTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPL 526 A +S TS++H GV + RP R P + P++E V P P +SLP P PL Sbjct: 1973 ASSSSTSTRH-LQGVEFEM---RPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPL 2028 Query: 527 PPS-----RHPTGSI------LKAVVVKPHQPAITRG 604 P PTG V V PH P I+ G Sbjct: 2029 YPGLFDIRGSPTGGAGGSADPFAPVFVPPH-PGISGG 2064
>IDLC_HUMAN (O14645) Axonemal dynein light intermediate polypeptide 1 (Inner| dynein arm light chain, axonemal) (hp28) Length = 258 Score = 32.7 bits (73), Expect = 0.93 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +2 Query: 440 PSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKPHQPAITRGWIETV 619 P P PS P P K LP PC P P + IL A++ T+ WI+ V Sbjct: 35 PQQPGPSGS---APQPPKTKLPSTPCVPDPTKQ--AEEILNAILPPREWVEDTQLWIQQV 89 Query: 620 AA 625 ++ Sbjct: 90 SS 91
>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)| Length = 485 Score = 32.7 bits (73), Expect = 0.93 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Frame = +2 Query: 416 PQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKPHQPAI 595 P S PP P P P+P+ P +P P+PP P S+L A P + Sbjct: 274 PPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSPP-SVLPAATGFPFCECV 332 Query: 596 TRG-----WIETVAACRAL 637 +R W TVA A+ Sbjct: 333 SRSPSSYPWRVTVANVSAV 351
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 11/74 (14%) Frame = +2 Query: 407 TYRPQGSDRGPPSTP---------SPSNE*VVKPNPNKASLPK--APCKPLPPSRHPTGS 553 TY P PP+TP SP + V P P KAS P P P ++ PT Sbjct: 73 TYTPSPKPTPPPATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKPPATKPPTYP 132 Query: 554 ILKAVVVKPHQPAI 595 K KP P + Sbjct: 133 TPKPPATKPPTPPV 146
>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)| Length = 841 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +2 Query: 344 QAPTSLTSSK-HGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCK 520 ++P++++S+ HG +G S+ R + P T S + P P +PC Sbjct: 568 KSPSTVSSTTVHGQNGARGDSAPSRKSQQSQQQPETTSKESSKTAAMPP-----PPSPCS 622 Query: 521 PLPPSRHPTGSILKAVVVKPHQP 589 P P SR S + +PH P Sbjct: 623 PSPASRERRPSKSPSSSPRPHDP 645
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/43 (41%), Positives = 20/43 (46%) Frame = +2 Query: 416 PQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHP 544 P PPS PSP+ P P S P +P PLPPS P Sbjct: 111 PAPPSPAPPSPPSPAPPSPSPPAPPSPS-PPSPAPPLPPSPAP 152 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/52 (30%), Positives = 21/52 (40%) Frame = +2 Query: 437 PPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKPHQPA 592 PP P P+N + P+ P P P PPS P + + P PA Sbjct: 275 PPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPA 326 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = +2 Query: 437 PPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHP 544 PPS PSP+ P P S P AP P+PPS P Sbjct: 217 PPSPPSPAPPSPPSPAPPSPS-PPAPPSPVPPSPAP 251 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +2 Query: 416 PQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLP-PSRHPT 547 P + PP+ PSPS V P+P A +P +P P P PS P+ Sbjct: 295 PSPAPPTPPTPPSPSPPSPVPPSP--APVPPSPAPPSPAPSPPPS 337 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 416 PQGSDRGPPSTPSPSNE*VVKPNPNKAS----LPKAPCKPLPPSRHP 544 P S PPS PS + P+P S +P +P P+PPS P Sbjct: 127 PSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAP 173
>ODO2_MYCTU (P65633) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) Length = 553 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +2 Query: 425 SDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKP 580 +D G P P+ KP P A PKA P PP+ P G+ A V P Sbjct: 199 ADIGAAPAPKPAP----KPVPEPAPTPKAEPAPSPPAAQPAGAAEGAPYVTP 246
>ODO2_MYCBO (P65634) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) Length = 553 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +2 Query: 425 SDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKP 580 +D G P P+ KP P A PKA P PP+ P G+ A V P Sbjct: 199 ADIGAAPAPKPAP----KPVPEPAPTPKAEPAPSPPAAQPAGAAEGAPYVTP 246
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 32.0 bits (71), Expect = 1.6 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +2 Query: 410 YRPQGSDRGPPSTPSPSNE*VVKPN--PNKASLP-KAPCKPLPPSRHPTGSILKAVVVKP 580 Y P GS R PP P +V+P+ P ++S+P P P+PP P V+KP Sbjct: 1311 YPPPGSYRPPPPMGKPPGS-IVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKP 1369 Query: 581 HQPAI 595 A+ Sbjct: 1370 QTSAV 1374
>HMOC_DROME (P22810) Homeotic protein ocelliless (Protein orthodenticle)| Length = 671 Score = 31.6 bits (70), Expect = 2.1 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Frame = +2 Query: 320 DAIRAP---LLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNP- 487 D +R+P L A + + H + ++ P+ G TP S+ + P+P Sbjct: 386 DLLRSPYDQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSSITTPSPP 445 Query: 488 -NKASLPKAPCKPLPPSRHPTGSILKAV--VVKPHQPAITRGWIET 616 S AP +P+PP+R +IL + + P IT G I T Sbjct: 446 ITPMSPQSAPQRPMPPNRPSPPTILPPIRPPICPIMIRITSGTIST 491
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/36 (38%), Positives = 15/36 (41%) Frame = +2 Query: 437 PPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHP 544 PP PSPS P P +P C P PP P Sbjct: 99 PPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQP 134
>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)| Length = 1430 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/52 (36%), Positives = 19/52 (36%) Frame = +2 Query: 413 RPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAV 568 RP GPP P P P A P PLPP P GS K V Sbjct: 1181 RPASEQAGPPELPPP---------PPPAEPPPTDLMPLPPLPLPDGSARKPV 1223
>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 15) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD disintegrin protein) (Metargidin) (AD56) Length = 864 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +2 Query: 437 PPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPS---RHPTGSI 556 PP+ P P++ V +P + P P KPLP + +HP G + Sbjct: 794 PPTRPLPADPVVRRPKSQGPTKPPPPRKPLPANPQGQHPPGDL 836
>SETB1_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysine-9 specific 4| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4) (H3-K9-HMTase 4) (SET domain bifurcated 1) (ERG-associated protein with SET domain) (ESET) Length = 1307 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +2 Query: 347 APTSLTSSKHGFSGVLWHSSTYR-PQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKP 523 +PTS T S++ +G L + TYR P S P++ +P V P P P AP P Sbjct: 504 SPTSSTLSENVSAGKLGINQTYRSPLASVTSTPASAAPPVP-PVPPGPPTPPGPPAPPGP 562 Query: 524 L-PPSRH 541 L PP+ H Sbjct: 563 LAPPAFH 569
>TRPG_PENCH (P24773) Anthranilate synthase component 2 (EC 4.1.3.27)| (Anthranilate synthase component II) [Includes: Glutamine amidotransferase; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS); N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3 Length = 752 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = -2 Query: 566 LPSICFLLDVLMVEEVYRVLLARMLYLDLA*RLIRCLDLECLEGLYHF 423 LP+ +L V E Y++L AR+ D +++ LD+E L LYH+ Sbjct: 354 LPNRPAVLRKEFVFEEYQILEARLAGADTVLLIVKMLDIELLTRLYHY 401
>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E1) (Cellulase E1) (Endocellulase E1) Length = 562 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 401 SSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKA-SLPKAPCKPLPPSRHPTGSILKAVVVK 577 SS + P G+ P S PSPS V P+P+ + S + P P+ PT ++ Sbjct: 393 SSIFDPVGASASPSSQPSPS----VSPSPSPSPSASRTPTPTPTPTASPTPTLTPTATPT 448 Query: 578 P 580 P Sbjct: 449 P 449
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +2 Query: 440 PSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSR 538 PS+PSP +VKP P P +PCKP PP + Sbjct: 139 PSSPSP----LVKPPPP----PPSPCKPSPPDQ 163
>POL2_GFLV (P18474) RNA2 polyprotein (P2) [Contains: P2A protein (2A);| Movement protein (2B-MP); Coat protein (2C-CP)] Length = 1109 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 428 DRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLP 529 +R PS P ++E VV P P K +P P P P Sbjct: 84 ERPAPSRPVKADEVVVVPQPKKVVIPTPPPPPAP 117
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +2 Query: 416 PQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPS 535 PQ + PSTP PS P P S P P PLPPS Sbjct: 287 PQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP--PLPPS 324
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/77 (28%), Positives = 30/77 (38%) Frame = +2 Query: 329 RAPLLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPK 508 R P L LT+ + S T + S + PP P+P P + + Sbjct: 421 RTPALSPQRPLTTQQP-------QSGTLKEPDSSKTPPQRPAPQG------GPGQPQGMQ 467 Query: 509 APCKPLPPSRHPTGSIL 559 P K LPP R P+G L Sbjct: 468 PPGKVLPPRRLPSGPSL 484
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = +2 Query: 335 PLLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAP 514 P + P S SS S S P+ S + P + P P+P K S K+P Sbjct: 537 PPRRHPESKGSSDSATSQEHSESKDPPPKSSSKAPRAPPEA-------PHPGKRSCQKSP 589 Query: 515 CKPLPPSRHPTGS 553 + PP R G+ Sbjct: 590 AQQEPPQRQTVGT 602
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)| Length = 544 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +2 Query: 437 PPSTPSPSNE*V----VKPNPNKASLPKAPCKPLPPSRHPTGSILK 562 P STP+P+++ + P P K+S P P P P+ S+ K Sbjct: 171 PTSTPTPTSQTIPPPTTTPKPTKSSKPTKTPVPTPTPTRPSSSVSK 216
>SDC3_CHICK (P26261) Syndecan-3 precursor| Length = 405 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/80 (30%), Positives = 33/80 (41%) Frame = +2 Query: 305 TTRNTDAIRAPLLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPN 484 TT T P T +T+S+ L SST +P+ S P PS +P Sbjct: 194 TTLETPTTSIPETSVLTEVTTSR------LVPSSTAKPR-------SLPKPSTSRTAEPT 240 Query: 485 PNKASLPKAPCKPLPPSRHP 544 +LP +P LPP+ P Sbjct: 241 EKSTALPSSP-TTLPPTEAP 259
>WBS14_MOUSE (Q99MZ3) Williams-Beuren syndrome chromosome region 14 protein| homolog (Mlx interactor) (MLX-interacting protein-like) Length = 864 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 3/92 (3%) Frame = +2 Query: 317 TDAIRAPLLQAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKA 496 + I AP + +P S +SS SG+ HS R Q R S P + PNP + Sbjct: 332 SSGILAPEMPSPASSSSS----SGMTPHSGNTRLQA--RNSCSGP-------LDPNPFLS 378 Query: 497 S---LPKAPCKPLPPSRHPTGSILKAVVVKPH 583 S LP+ P +PP+ PT + VK H Sbjct: 379 SEFLLPEDPKTKIPPAPGPTPLLPFPTPVKVH 410
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 29.6 bits (65), Expect = 7.9 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +2 Query: 350 PTSLT-SSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNKASLPKAPCKPL 526 PT+ T +S G + ++ SS+ + GPP+ P+P++ P P P PL Sbjct: 225 PTAPTPTSPFGTAPMVLSSSS-----TSSGPPTAPTPTSPFGTAPMPPGPPPPGTVSPPL 279 Query: 527 PPSRHPTG 550 PPS G Sbjct: 280 PPSAPAVG 287
>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)| Length = 250 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +2 Query: 422 GSDRGPPSTPSPSNE*VVKPNPNKASLP--KAPCKPLPPSRHPTGSILKAVVVKPHQPAI 595 GS G P P P+ P A LP +A +P P + P G+ LK QPA+ Sbjct: 86 GSHYGAPGEPCPA--------PPPAPLPGARACSQPTGPKQPPPGTALK-------QPAV 130 Query: 596 TRGWIETV 619 W++ V Sbjct: 131 VYPWMKKV 138
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +2 Query: 437 PPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKP 580 PP P PS + + +AS+ P P+PP P + L+A V P Sbjct: 326 PPPPPLPS---ALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPP 370
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +2 Query: 437 PPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKP 580 PP P PS + + +AS+ P P+PP P + L+A V P Sbjct: 326 PPPPPLPS---ALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPP 370
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 29.6 bits (65), Expect = 7.9 Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 13/97 (13%) Frame = +2 Query: 344 QAPTSLTSSKHGFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VV--KPNPNKASLP---- 505 Q P S TS+ H S +S Y PQ PP T P+N V P PN P Sbjct: 192 QQPPS-TSAPH--SSPNNRTSLYNPQP----PPKTGYPTNPRVPYNPPQPNYTRQPTYPE 244 Query: 506 --KAPCKPL-----PPSRHPTGSILKAVVVKPHQPAI 595 +AP KP PP R P+G P P I Sbjct: 245 DNRAPYKPTRSPNTPPPRQPSGGYDSDGQTPPSSPRI 281
>IDLC_MOUSE (Q8BVN8) Axonemal dynein light intermediate polypeptide 1 (Inner| dynein arm light chain, axonemal) Length = 258 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +2 Query: 449 PSPSNE*VVKPNPNKASLPKAPCKPLPPSRHPTGSILKAVVVKPHQPAITRGWIETVAA 625 P PS+ P P KA LP C P P + IL A++ T+ WI+ V++ Sbjct: 38 PGPSS---TSPQPPKAKLPSTSCVPDPTKQ--AEEILNAILPPREWVEDTQLWIQQVSS 91
>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)| Length = 443 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 434 GPPSTPSPSNE*VVKPNPNKASLPKAPCKPLPPSRHP 544 GPPS P E + P P +A+ P AP P PP + P Sbjct: 78 GPPSQPPGLGEPPLPPPPPQAA-PPAPQPPQPPPQPP 113
>FTSK_HAEIN (P45264) DNA translocase ftsK| Length = 529 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +2 Query: 377 GFSGVLWHSSTYRPQGSDRGPPSTPSPSNE*VVKPNPNK 493 G+SG L H + ++ Q + R PSTP PS + ++K PN+ Sbjct: 16 GYSGSLIHPA-FQQQTTKREKPSTPLPSLDLLLKYPPNE 53
>E75_METEN (O77245) Nuclear hormone receptor E75| Length = 606 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 3 GAEVTGXFNGRVPAPCARFXHTHAAGVKSKKKTRISP 113 G+EV+G R P P AR H H+ G S + SP Sbjct: 437 GSEVSGYTELRPPFPLARRRHDHSEGASSGDEATESP 473
>TCNA_TRYCR (P23253) Sialidase (EC 3.2.1.18) (Neuraminidase) (NA) (Major| surface antigen) Length = 1162 Score = 29.6 bits (65), Expect = 7.9 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%) Frame = +2 Query: 305 TTRNTDAIRAPLLQAPTSLTSSKHGFSGVLWHSSTYRP-QGSDRGPPSTPSPSNE*VVKP 481 T ++ A P A +S S+ + HS+ P S G PSTP+ S+ Sbjct: 722 TPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTPSTPVDSSAHGTPSTPADSSAHSTPS 781 Query: 482 NPNKASLPKAPCKPLPPSRHPTGS 553 P +S P P+ S H T S Sbjct: 782 TPADSSAHGTPSTPVDSSAHSTPS 805 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,264,683 Number of Sequences: 219361 Number of extensions: 1699562 Number of successful extensions: 6483 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 5410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6315 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
