ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18c20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469950.1| Oryza sativa (japonica cultivar-group), mRNA 337 3e-89
2ref|XM_507074.1| PREDICTED Oryza sativa (japonica cultivar-group... 337 3e-89
3dbj|AK064808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
4gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 111 3e-21
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 3e-21
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
7ref|NM_122913.2| Arabidopsis thaliana EGY1 (ETHYLENE-DEPENDENT G... 107 4e-20
8gb|AY050809.1| Arabidopsis thaliana unknown protein (At5g35220) ... 107 4e-20
9emb|BX830285.1|CNS0A1BC Arabidopsis thaliana Full-length cDNA Co... 107 4e-20
10gb|BT001978.1| Arabidopsis thaliana clone U11036 unknown protein... 107 4e-20
11ref|NM_122912.3| Arabidopsis thaliana DNA binding / protein bind... 101 3e-18
12ref|NM_180763.1| Arabidopsis thaliana DNA binding / metalloendop... 101 3e-18
13gb|BT008619.1| Arabidopsis thaliana clone RAFL19-54-F24 (R50829)... 101 3e-18
14emb|BX832540.1|CNS09YTD Arabidopsis thaliana Full-length cDNA Co... 88 4e-14
15gb|BT013532.1| Lycopersicon esculentum clone 132250R, mRNA sequence 76 2e-10
16dbj|AP002031.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 64 6e-07
17gb|AF080121.1|T25C13 Arabidopsis thaliana BAC T25C13 64 6e-07
18dbj|AK062004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
19gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosom... 44 0.56
20gb|AC117256.4| Mus musculus BAC clone RP24-483G23 from chromosom... 44 0.56
21gb|AC145744.3| Mus musculus BAC clone RP24-142P6 from 16, comple... 44 0.56
22gb|AF097649.1| Homo sapiens chromosome 7qtelo BAC E5, complete s... 42 2.2
23gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, R... 42 2.2
24gb|AC113551.3| Homo sapiens chromosome 18, clone RP11-208K1, com... 42 2.2
25gb|AC011709.11| Homo sapiens chromosome 18, clone RP11-500H12, c... 42 2.2
26gb|AC135335.3| Homo sapiens chromosome 18, clone RP13-1026H1, co... 42 2.2
27gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosom... 42 2.2
28ref|XM_478986.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
29gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete... 40 8.8
30gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosom... 40 8.8
31gb|AC163023.4| Mus musculus chromosome 3, clone RP24-247E19, com... 40 8.8
32emb|AJ290955.1|PHE290955 Phocid herpesvirus-1, strain PB84 Us2 g... 40 8.8
33gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosom... 40 8.8
34ref|XM_536796.2| PREDICTED: Canis familiaris similar to Tyrosine... 40 8.8
35emb|AL445199.37| Human DNA sequence from clone RP13-439H18 on ch... 40 8.8
36gb|AY691320.1| Aedes polynesiensis vitellogenin C (Vg-C) gene, p... 40 8.8
37emb|AL663075.6| Mouse DNA sequence from clone RP23-430I21 on chr... 40 8.8
38gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 40 8.8
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
42dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.8
43dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
44gb|AF078135.1|AF078135 Leptospira borgpetersenii lipopolysacchar... 40 8.8
45gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49... 40 8.8
46gb|AC006575.1|AC006575 Drosophila melanogaster, chromosome 2L, r... 40 8.8
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
48emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.8
49emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.8
50emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on ch... 40 8.8 
>ref|XM_469950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1754

 Score =  337 bits (170), Expect = 3e-89
 Identities = 260/290 (89%)
 Strand = Plus / Minus

                                                                        
Query: 350  ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctggcatagtagcacg 409
            ||||| |||||||| || | |||||| ||||| |||||||||||||| |||| |||||||
Sbjct: 1363 ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctgacatattagcacg 1304

                                                                        
Query: 410  tataggccccaaggaagtgatagaggccctccaagcactccaagtccaagcaacgaataa 469
            |||| |||||||||||| ||||| ||||| |||||||| || ||||||||||| || || 
Sbjct: 1303 tataagccccaaggaagagatagtggccccccaagcaccccgagtccaagcaatgagtat 1244

                                                                        
Query: 470  gtcgtcaagccaaatccaaataaagcatccttgccaaaagcaccctgtaaacctcttcca 529
            || ||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||
Sbjct: 1243 gttgtcaagccaaatccaaacaacgcatccttgccgaaagcaccctgtaaagctcttcca 1184

                                                                        
Query: 530  ccatcaagacatccaacaggaagcatattgaaggcagttgttgttaaaccacaccagcca 589
            ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| 
Sbjct: 1183 ccatcaagacatccaacaggaagcatattaaaggcagtagtcgttaaaccacaccagcct 1124

                                                              
Query: 590  gcgatcacaagagggtggatagaaactgtagcagcatgcagagcactgta 639
            || ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 1123 gcaatcacaagagggtggatagcaactgtagcagcatgcatagctctgta 1074
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>ref|XM_507074.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.23
            mRNA
          Length = 1937

 Score =  337 bits (170), Expect = 3e-89
 Identities = 260/290 (89%)
 Strand = Plus / Minus

                                                                        
Query: 350  ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctggcatagtagcacg 409
            ||||| |||||||| || | |||||| ||||| |||||||||||||| |||| |||||||
Sbjct: 1546 ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctgacatattagcacg 1487

                                                                        
Query: 410  tataggccccaaggaagtgatagaggccctccaagcactccaagtccaagcaacgaataa 469
            |||| |||||||||||| ||||| ||||| |||||||| || ||||||||||| || || 
Sbjct: 1486 tataagccccaaggaagagatagtggccccccaagcaccccgagtccaagcaatgagtat 1427

                                                                        
Query: 470  gtcgtcaagccaaatccaaataaagcatccttgccaaaagcaccctgtaaacctcttcca 529
            || ||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||
Sbjct: 1426 gttgtcaagccaaatccaaacaacgcatccttgccgaaagcaccctgtaaagctcttcca 1367

                                                                        
Query: 530  ccatcaagacatccaacaggaagcatattgaaggcagttgttgttaaaccacaccagcca 589
            ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| 
Sbjct: 1366 ccatcaagacatccaacaggaagcatattaaaggcagtagtcgttaaaccacaccagcct 1307

                                                              
Query: 590  gcgatcacaagagggtggatagaaactgtagcagcatgcagagcactgta 639
            || ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 1306 gcaatcacaagagggtggatagcaactgtagcagcatgcatagctctgta 1257
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>dbj|AK064808.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D19, full
            insert sequence
          Length = 1825

 Score =  337 bits (170), Expect = 3e-89
 Identities = 260/290 (89%)
 Strand = Plus / Minus

                                                                        
Query: 350  ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctggcatagtagcacg 409
            ||||| |||||||| || | |||||| ||||| |||||||||||||| |||| |||||||
Sbjct: 1547 ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctgacatattagcacg 1488

                                                                        
Query: 410  tataggccccaaggaagtgatagaggccctccaagcactccaagtccaagcaacgaataa 469
            |||| |||||||||||| ||||| ||||| |||||||| || ||||||||||| || || 
Sbjct: 1487 tataagccccaaggaagagatagtggccccccaagcaccccgagtccaagcaatgagtat 1428

                                                                        
Query: 470  gtcgtcaagccaaatccaaataaagcatccttgccaaaagcaccctgtaaacctcttcca 529
            || ||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||
Sbjct: 1427 gttgtcaagccaaatccaaacaacgcatccttgccgaaagcaccctgtaaagctcttcca 1368

                                                                        
Query: 530  ccatcaagacatccaacaggaagcatattgaaggcagttgttgttaaaccacaccagcca 589
            ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| 
Sbjct: 1367 ccatcaagacatccaacaggaagcatattaaaggcagtagtcgttaaaccacaccagcct 1308

                                                              
Query: 590  gcgatcacaagagggtggatagaaactgtagcagcatgcagagcactgta 639
            || ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 1307 gcaatcacaagagggtggatagcaactgtagcagcatgcatagctctgta 1258
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>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                         
Query: 513   cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
             |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 92388 cctgtaaagctcttccaccatcaagacatccaacaggaagcatattaaaggcagtagtcg 92447

                         
Query: 573   ttaaaccacacc 584
             ||||||||||||
Sbjct: 92448 ttaaaccacacc 92459



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 582   accagccagcgatcacaagagggtggatagaaactgtagcagcatgcagagcactgta 639
             ||||||| || ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 92542 accagcctgcaatcacaagagggtggatagcaactgtagcagcatgcatagctctgta 92599



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 452   agtccaagcaacgaataagtcgtcaagccaaatccaaataaagcatccttgccaaaagca 511
             ||||||||||| || || || ||||||||||||||||| || ||||||||||| ||||||
Sbjct: 92048 agtccaagcaatgagtatgttgtcaagccaaatccaaacaacgcatccttgccgaaagca 92107

                   
Query: 512   ccctgt 517
             ||||||
Sbjct: 92108 ccctgt 92113



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 398   catagtagcacgtataggccccaaggaagtgatagaggccctccaagc 445
             |||| ||||||||||| |||||||||||| ||||| ||||| ||||||
Sbjct: 91473 catattagcacgtataagccccaaggaagagatagtggccccccaagc 91520



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 350   ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctg 396
             ||||| |||||||| || | |||||| ||||| ||||||||||||||
Sbjct: 91336 ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctg 91382
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 513      cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
                |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 32651519 cctgtaaagctcttccaccatcaagacatccaacaggaagcatattaaaggcagtagtcg 32651460

                            
Query: 573      ttaaaccacacc 584
                ||||||||||||
Sbjct: 32651459 ttaaaccacacc 32651448



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                            
Query: 452      agtccaagcaacgaataagtcgtcaagccaaatccaaataaagcatccttgccaaaagca 511
                ||||||||||| || || || ||||||||||||||||| || ||||||||||| ||||||
Sbjct: 32651859 agtccaagcaatgagtatgttgtcaagccaaatccaaacaacgcatccttgccgaaagca 32651800

                      
Query: 512      ccctgt 517
                ||||||
Sbjct: 32651799 ccctgt 32651794



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                          
Query: 582      accagccagcgatcacaagagggtggatagaaactgtagcagcatgcagagcactgta 639
                ||||||| || ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 32651365 accagcctgcaatcacaagagggtggatagcaactgtagcagcatgcatagctctgta 32651308



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 398      catagtagcacgtataggccccaaggaagtgatagaggccctccaagc 445
                |||| ||||||||||| |||||||||||| ||||| ||||| ||||||
Sbjct: 32652434 catattagcacgtataagccccaaggaagagatagtggccccccaagc 32652387



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 350      ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctg 396
                ||||| |||||||| || | |||||| ||||| ||||||||||||||
Sbjct: 32652571 ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctg 32652525



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 331      ggcgcccctcctccaggcgc 350
                ||||||||||||||||||||
Sbjct: 12699046 ggcgcccctcctccaggcgc 12699027
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 513      cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
                |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 32742029 cctgtaaagctcttccaccatcaagacatccaacaggaagcatattaaaggcagtagtcg 32741970

                            
Query: 573      ttaaaccacacc 584
                ||||||||||||
Sbjct: 32741969 ttaaaccacacc 32741958



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                            
Query: 452      agtccaagcaacgaataagtcgtcaagccaaatccaaataaagcatccttgccaaaagca 511
                ||||||||||| || || || ||||||||||||||||| || ||||||||||| ||||||
Sbjct: 32742369 agtccaagcaatgagtatgttgtcaagccaaatccaaacaacgcatccttgccgaaagca 32742310

                      
Query: 512      ccctgt 517
                ||||||
Sbjct: 32742309 ccctgt 32742304



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                          
Query: 582      accagccagcgatcacaagagggtggatagaaactgtagcagcatgcagagcactgta 639
                ||||||| || ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 32741875 accagcctgcaatcacaagagggtggatagcaactgtagcagcatgcatagctctgta 32741818



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 398      catagtagcacgtataggccccaaggaagtgatagaggccctccaagc 445
                |||| ||||||||||| |||||||||||| ||||| ||||| ||||||
Sbjct: 32742944 catattagcacgtataagccccaaggaagagatagtggccccccaagc 32742897



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 350      ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctg 396
                ||||| |||||||| || | |||||| ||||| ||||||||||||||
Sbjct: 32743081 ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctg 32743035



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 331      ggcgcccctcctccaggcgc 350
                ||||||||||||||||||||
Sbjct: 12695809 ggcgcccctcctccaggcgc 12695790
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>ref|NM_122913.2| Arabidopsis thaliana EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT
            AND YELLOW-GREEN 1); sterol regulatory element-binding
            protein site 2 protease AT5G35220 (EGY1) mRNA, complete
            cds
          Length = 1823

 Score =  107 bits (54), Expect = 4e-20
 Identities = 102/118 (86%)
 Strand = Plus / Minus

                                                                        
Query: 512  ccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgtt 571
            ||||||| | ||||||| ||||| | |||||| || ||||||||||| || || ||||||
Sbjct: 1371 ccctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgtt 1312

                                                                      
Query: 572  gttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagcagcatgca 629
            |||||||||||||| ||||| || ||||| |||||||| |||||||| ||||||||||
Sbjct: 1311 gttaaaccacaccatccagcaattacaagtgggtggattgaaactgttgcagcatgca 1254



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 383  tcaggtgttctctggcatagtagcacgtataggccccaaggaagtgatagaggccctcca 442
            ||||||||||||||||| | ||  ||||| || |||||||||||||  | ||| || || 
Sbjct: 1500 tcaggtgttctctggcagattaatacgtagagtccccaaggaagtgccaaagggccaccg 1441

                               
Query: 443  agcactccaagtccaagca 461
            |||||||  ||||||||||
Sbjct: 1440 agcactctgagtccaagca 1422
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>gb|AY050809.1| Arabidopsis thaliana unknown protein (At5g35220) mRNA, complete cds
          Length = 1816

 Score =  107 bits (54), Expect = 4e-20
 Identities = 102/118 (86%)
 Strand = Plus / Minus

                                                                        
Query: 512  ccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgtt 571
            ||||||| | ||||||| ||||| | |||||| || ||||||||||| || || ||||||
Sbjct: 1371 ccctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgtt 1312

                                                                      
Query: 572  gttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagcagcatgca 629
            |||||||||||||| ||||| || ||||| |||||||| |||||||| ||||||||||
Sbjct: 1311 gttaaaccacaccatccagcaattacaagtgggtggattgaaactgttgcagcatgca 1254



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 383  tcaggtgttctctggcatagtagcacgtataggccccaaggaagtgatagaggccctcca 442
            ||||||||||||||||| | ||  ||||| || |||||||||||||  | ||| || || 
Sbjct: 1500 tcaggtgttctctggcagattaatacgtagagtccccaaggaagtgccaaagggccaccg 1441

                               
Query: 443  agcactccaagtccaagca 461
            |||||||  ||||||||||
Sbjct: 1440 agcactctgagtccaagca 1422
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>emb|BX830285.1|CNS0A1BC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB70ZE03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1777

 Score =  107 bits (54), Expect = 4e-20
 Identities = 102/118 (86%)
 Strand = Plus / Minus

                                                                        
Query: 512  ccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgtt 571
            ||||||| | ||||||| ||||| | |||||| || ||||||||||| || || ||||||
Sbjct: 1363 ccctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgtt 1304

                                                                      
Query: 572  gttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagcagcatgca 629
            |||||||||||||| ||||| || ||||| |||||||| |||||||| ||||||||||
Sbjct: 1303 gttaaaccacaccatccagcaattacaagtgggtggattgaaactgttgcagcatgca 1246



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 383  tcaggtgttctctggcatagtagcacgtataggccccaaggaagt 427
            ||||||||||||||||| | ||  ||||| || ||||||||||||
Sbjct: 1492 tcaggtgttctctggcagattaatacgtagagtccccaaggaagt 1448
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>gb|BT001978.1| Arabidopsis thaliana clone U11036 unknown protein (At5g35220) mRNA,
            complete cds
          Length = 1678

 Score =  107 bits (54), Expect = 4e-20
 Identities = 102/118 (86%)
 Strand = Plus / Minus

                                                                        
Query: 512  ccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgtt 571
            ||||||| | ||||||| ||||| | |||||| || ||||||||||| || || ||||||
Sbjct: 1370 ccctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgtt 1311

                                                                      
Query: 572  gttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagcagcatgca 629
            |||||||||||||| ||||| || ||||| |||||||| |||||||| ||||||||||
Sbjct: 1310 gttaaaccacaccatccagcaattacaagtgggtggattgaaactgttgcagcatgca 1253



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 383  tcaggtgttctctggcatagtagcacgtataggccccaaggaagtgatagaggccctcca 442
            ||||||||||||||||| | ||  ||||| || |||||||||||||  | ||| || || 
Sbjct: 1499 tcaggtgttctctggcagattaatacgtagagtccccaaggaagtgccaaagggccaccg 1440

                               
Query: 443  agcactccaagtccaagca 461
            |||||||  ||||||||||
Sbjct: 1439 agcactctgagtccaagca 1421
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>ref|NM_122912.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding
            AT5G35210 transcript variant AT5G35210.2 mRNA, complete
            cds
          Length = 5433

 Score =  101 bits (51), Expect = 3e-18
 Identities = 108/127 (85%)
 Strand = Plus / Minus

                                                                        
Query: 503  ccaaaagcaccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaag 562
            ||||| || ||||||| | ||||||| ||||| | |||||| || ||||||||||| || 
Sbjct: 4950 ccaaatgcgccctgtacagctcttcctccatccaaacatcccactggaagcatattaaat 4891

                                                                        
Query: 563  gcagttgttgttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagca 622
            || |||||||||||||||||||| || || || ||||| |||||||| |||||||| |||
Sbjct: 4890 gctgttgttgttaaaccacaccatccggcaattacaagcgggtggattgaaactgtcgca 4831

                   
Query: 623  gcatgca 629
            |||||||
Sbjct: 4830 gcatgca 4824
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>ref|NM_180763.1| Arabidopsis thaliana DNA binding / metalloendopeptidase/ protein
            binding / zinc ion binding AT5G35210 transcript variant
            AT5G35210.1 mRNA, complete cds
          Length = 5034

 Score =  101 bits (51), Expect = 3e-18
 Identities = 108/127 (85%)
 Strand = Plus / Minus

                                                                        
Query: 503  ccaaaagcaccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaag 562
            ||||| || ||||||| | ||||||| ||||| | |||||| || ||||||||||| || 
Sbjct: 4613 ccaaatgcgccctgtacagctcttcctccatccaaacatcccactggaagcatattaaat 4554

                                                                        
Query: 563  gcagttgttgttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagca 622
            || |||||||||||||||||||| || || || ||||| |||||||| |||||||| |||
Sbjct: 4553 gctgttgttgttaaaccacaccatccggcaattacaagcgggtggattgaaactgtcgca 4494

                   
Query: 623  gcatgca 629
            |||||||
Sbjct: 4493 gcatgca 4487
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>gb|BT008619.1| Arabidopsis thaliana clone RAFL19-54-F24 (R50829) At5g35210 mRNA,
            partial sequence
          Length = 2083

 Score =  101 bits (51), Expect = 3e-18
 Identities = 108/127 (85%)
 Strand = Plus / Minus

                                                                        
Query: 503  ccaaaagcaccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaag 562
            ||||| || ||||||| | ||||||| ||||| | |||||| || ||||||||||| || 
Sbjct: 1586 ccaaatgcgccctgtacagctcttcctccatccaaacatcccactggaagcatattaaat 1527

                                                                        
Query: 563  gcagttgttgttaaaccacaccagccagcgatcacaagagggtggatagaaactgtagca 622
            || |||||||||||||||||||| || || || ||||| |||||||| |||||||| |||
Sbjct: 1526 gctgttgttgttaaaccacaccatccggcaattacaagcgggtggattgaaactgtcgca 1467

                   
Query: 623  gcatgca 629
            |||||||
Sbjct: 1466 gcatgca 1460
to top
>emb|BX832540.1|CNS09YTD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH7ZA11 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1959

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                        
Query: 503  ccaaaagcaccctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaag 562
            ||||| || ||||||| | ||||||| ||||| | |||||| || ||||||||||| || 
Sbjct: 1487 ccaaatgcgccctgtacagctcttcctccatccaaacatcccactggaagcatattaaat 1428

                                                                    
Query: 563  gcagttgttgttaaaccacaccagccagcgatcacaagagggtggatagaaactgt 618
            || |||||||||||||||||||| || || || ||||| |||||||| ||||||||
Sbjct: 1427 gctgttgttgttaaaccacaccatccggcaattacaagcgggtggattgaaactgt 1372
to top
>gb|BT013532.1| Lycopersicon esculentum clone 132250R, mRNA sequence
          Length = 1988

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                        
Query: 522  ctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttgttaaaccac 581
            |||| |||||||||||||||||||| || |||||||| || || |  || || || ||||
Sbjct: 1470 ctctcccaccatcaagacatccaactggtagcatattaaaagctgacgtagtcaagccac 1411

                                              
Query: 582  accagccagcgatcacaagagggtggatagaaac 615
            |||||||||| |||||||| |||||||| |||||
Sbjct: 1410 accagccagcaatcacaagggggtggattgaaac 1377



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 365  tcgtccaagcatggcttctcaggtgttctctggcatagtagcacgtataggccccaagga 424
            |||| ||||||||| ||||| ||||  ||||| ||||  ||||| ||||  |||||||||
Sbjct: 1627 tcgttcaagcatggtttctctggtgacctctgacatataagcacatataatccccaagga 1568

                                   
Query: 425  agtgatagaggccctccaagcac 447
            ||||||||||| || ||||||||
Sbjct: 1567 agtgatagaggtccaccaagcac 1545
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>dbj|AP002031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3D20
          Length = 81208

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 513   cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
             |||||| | ||||||| ||||| | |||||| || ||||||||||| || || |||||||
Sbjct: 65126 cctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgttg 65185

                         
Query: 573   ttaaaccacacc 584
             ||||||||||||
Sbjct: 65186 ttaaaccacacc 65197



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 513   cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
             |||||| | ||||||| ||||| | |||||| || ||||||||||| || || |||||||
Sbjct: 54807 cctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgttg 54866

                         
Query: 573   ttaaaccacacc 584
             ||||||||||||
Sbjct: 54867 ttaaaccacacc 54878
to top
>gb|AF080121.1|T25C13 Arabidopsis thaliana BAC T25C13
          Length = 120067

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 513   cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
             |||||| | ||||||| ||||| | |||||| || ||||||||||| || || |||||||
Sbjct: 96882 cctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgttg 96941

                         
Query: 573   ttaaaccacacc 584
             ||||||||||||
Sbjct: 96942 ttaaaccacacc 96953



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 513   cctgtaaacctcttccaccatcaagacatccaacaggaagcatattgaaggcagttgttg 572
             |||||| | ||||||| ||||| | |||||| || ||||||||||| || || |||||||
Sbjct: 86563 cctgtacagctcttcctccatccaaacatcccactggaagcatattaaatgctgttgttg 86622

                         
Query: 573   ttaaaccacacc 584
             ||||||||||||
Sbjct: 86623 ttaaaccacacc 86634
to top
>dbj|AK062004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D08, full
           insert sequence
          Length = 443

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 350 ccgacgtcgctcacgtcgtccaagcatggcttctcaggtgttctctggcata 401
           ||||| |||||||| || | |||||| ||||| |||||||||||||| ||||
Sbjct: 52  ccgacatcgctcacatcattcaagcagggcttttcaggtgttctctgacata 1
to top
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete
             sequence
          Length = 211002

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 171   ttgacctggttgcaacatggcc 192
             ||||||||||||||||||||||
Sbjct: 49118 ttgacctggttgcaacatggcc 49097
to top
>gb|AC117256.4| Mus musculus BAC clone RP24-483G23 from chromosome 16, complete
             sequence
          Length = 167118

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 171   ttgacctggttgcaacatggcc 192
             ||||||||||||||||||||||
Sbjct: 43631 ttgacctggttgcaacatggcc 43652
to top
>gb|AC145744.3| Mus musculus BAC clone RP24-142P6 from 16, complete sequence
          Length = 207240

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 171   ttgacctggttgcaacatggcc 192
             ||||||||||||||||||||||
Sbjct: 56968 ttgacctggttgcaacatggcc 56989
to top
>gb|AF097649.1| Homo sapiens chromosome 7qtelo BAC E5, complete sequence
          Length = 51858

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 557   ttgaaggcagttgttgttaaa 577
             |||||||||||||||||||||
Sbjct: 38849 ttgaaggcagttgttgttaaa 38829
to top
>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete
              Sequence, complete sequence
          Length = 195048

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 608    atagaaactgtagcagcatgc 628
              |||||||||||||||||||||
Sbjct: 184384 atagaaactgtagcagcatgc 184364
to top
>gb|AC113551.3| Homo sapiens chromosome 18, clone RP11-208K1, complete sequence
          Length = 179281

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 557   ttgaaggcagttgttgttaaa 577
             |||||||||||||||||||||
Sbjct: 71527 ttgaaggcagttgttgttaaa 71547
to top
>gb|AC011709.11| Homo sapiens chromosome 18, clone RP11-500H12, complete sequence
          Length = 193321

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 557    ttgaaggcagttgttgttaaa 577
              |||||||||||||||||||||
Sbjct: 179650 ttgaaggcagttgttgttaaa 179630
to top
>gb|AC135335.3| Homo sapiens chromosome 18, clone RP13-1026H1, complete sequence
          Length = 155498

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 557    ttgaaggcagttgttgttaaa 577
              |||||||||||||||||||||
Sbjct: 122215 ttgaaggcagttgttgttaaa 122235
to top
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence
          Length = 194611

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 608   atagaaactgtagcagcatgc 628
             |||||||||||||||||||||
Sbjct: 46192 atagaaactgtagcagcatgc 46172
to top
>ref|XM_478986.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 283 ccacagggggatgaggatga 302
           ||||||||||||||||||||
Sbjct: 520 ccacagggggatgaggatga 539
to top
>gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete sequence
          Length = 164565

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 478   gccaaatccaaataaagcatcctt 501
             ||||||| ||||||||||||||||
Sbjct: 69535 gccaaatacaaataaagcatcctt 69558
to top
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence
          Length = 202580

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 369   ccaagcatggcttctcaggtgttctctg 396
             |||| ||||||||||||||| |||||||
Sbjct: 22671 ccaaccatggcttctcaggtattctctg 22644
to top
>gb|AC163023.4| Mus musculus chromosome 3, clone RP24-247E19, complete sequence
          Length = 166206

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   tgaatgatcttacaacagtt 138
             ||||||||||||||||||||
Sbjct: 14913 tgaatgatcttacaacagtt 14894
to top
>emb|AJ290955.1|PHE290955 Phocid herpesvirus-1, strain PB84 Us2 gene (partial), Us3 gene, Us4
            gene, Us6 gene, Us7 gene, Us8 gene, Us8.5 gene and Us9
            gene
          Length = 9578

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  gaggatgagcacgacgagga 314
            ||||||||||||||||||||
Sbjct: 9331 gaggatgagcacgacgagga 9312



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 gaggatgagcacgacgagga 314
           ||||||||||||||||||||
Sbjct: 249 gaggatgagcacgacgagga 268
to top
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence
          Length = 229312

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 369    ccaagcatggcttctcaggtgttctctg 396
              |||| ||||||||||||||| |||||||
Sbjct: 186386 ccaaccatggcttctcaggtattctctg 186359
to top
>ref|XM_536796.2| PREDICTED: Canis familiaris similar to Tyrosine aminotransferase
           (L-tyrosine:2-oxoglutarate aminotransferase) (TAT)
           (LOC479665), mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 476 aagccaaatccaaataaagc 495
           ||||||||||||||||||||
Sbjct: 268 aagccaaatccaaataaagc 287
to top
>emb|AL445199.37| Human DNA sequence from clone RP13-439H18 on chromosome 10 Contains the
              GPR123 gene for G protein-coupled receptor 123, a novel
              gene (containing KIAA1768, FLJ00378 and FLJ00252), gene
              FLJ25027, the UTF1 gene for undifferentiated embryonic cell
              transcription factor 1, the 5' end of the VENTX2 gene for
              VENT-like homeobox2, a novel gene, a 60S ribosomal protein
              L5 (RPL5) pseudogene and twenty five CpG islands, complete
              sequence
          Length = 212199

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tcagggcgcccctcctccag 346
              ||||||||||||||||||||
Sbjct: 174231 tcagggcgcccctcctccag 174250
to top
>gb|AY691320.1| Aedes polynesiensis vitellogenin C (Vg-C) gene, partial cds
          Length = 5848

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  ggatgaggatgagcacgacgagga 314
            ||||||||||||| ||||||||||
Sbjct: 5095 ggatgaggatgaggacgacgagga 5072
to top
>emb|AL663075.6| Mouse DNA sequence from clone RP23-430I21 on chromosome 11, complete
             sequence
          Length = 100983

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 595   cacaagagggtggatagaaa 614
             ||||||||||||||||||||
Sbjct: 25064 cacaagagggtggatagaaa 25045
to top
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gaggatgagcacgacgagga 314
             ||||||||||||||||||||
Sbjct: 38164 gaggatgagcacgacgagga 38183
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 287     agggggatgaggatgagcacgacgagga 314
               ||||||||||||| ||| ||||||||||
Sbjct: 6948699 agggggatgaggaggaggacgacgagga 6948672
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 283      ccacagggggatgaggatga 302
                ||||||||||||||||||||
Sbjct: 24141111 ccacagggggatgaggatga 24141092
to top
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050D18, complete sequence
          Length = 126350

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   ggcgcccctcctccaggcgc 350
             ||||||||||||||||||||
Sbjct: 53499 ggcgcccctcctccaggcgc 53480
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 301     gagcacgacgaggaacaccg 320
               ||||||||||||||||||||
Sbjct: 5946234 gagcacgacgaggaacaccg 5946253
to top
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1710_H11
          Length = 136107

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   ccacagggggatgaggatga 302
             ||||||||||||||||||||
Sbjct: 74526 ccacagggggatgaggatga 74507
to top
>gb|AF078135.1|AF078135 Leptospira borgpetersenii lipopolysaccharide o-antigen biosynthetic
             locus, complete sequence
          Length = 36783

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 491   aaagcatccttgccaaaagcaccc 514
             ||||||||||| ||||||||||||
Sbjct: 22267 aaagcatccttcccaaaagcaccc 22244
to top
>gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49 of 83 of the complete
             sequence
          Length = 271118

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 478   gccaaatccaaataaagcatcctt 501
             ||||||| ||||||||||||||||
Sbjct: 83412 gccaaatacaaataaagcatcctt 83389
to top
>gb|AC006575.1|AC006575 Drosophila melanogaster, chromosome 2L, region 34C1-34C5, BAC clones
             DS00157 and BACR48M03, complete sequence
          Length = 68133

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 478   gccaaatccaaataaagcatcctt 501
             ||||||| ||||||||||||||||
Sbjct: 43396 gccaaatacaaataaagcatcctt 43419
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 287     agggggatgaggatgagcacgacgagga 314
               ||||||||||||| ||| ||||||||||
Sbjct: 6948578 agggggatgaggaggaggacgacgagga 6948551
to top
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144563

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 287   agggggatgaggatgagcacgacgagga 314
             ||||||||||||| ||| ||||||||||
Sbjct: 13339 agggggatgaggaggaggacgacgagga 13366
to top
>emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa0084K07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147611

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 287    agggggatgaggatgagcacgacgagga 314
              ||||||||||||| ||| ||||||||||
Sbjct: 131514 agggggatgaggaggaggacgacgagga 131541
to top
>emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete
             sequence
          Length = 173477

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 610   agaaactgtagcagcatgca 629
             ||||||||||||||||||||
Sbjct: 53850 agaaactgtagcagcatgca 53869


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,114,223
Number of Sequences: 3902068
Number of extensions: 4114223
Number of successful extensions: 74405
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74116
Number of HSP's gapped (non-prelim): 288
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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