ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18c16 |
|---|---|
| Clone Library Name | barley_pub |
>MCCA_SOYBN (Q42777) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial| precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) Length = 731 Score = 118 bits (296), Expect = 2e-26 Identities = 64/145 (44%), Positives = 89/145 (61%) Frame = -1 Query: 714 DVKVDGRSENDFRVEVGGVQTDVTLAFYSKDNSXXXXXXXXXXXXHYRQTMRAEHLLDDS 535 +VK +N FRVE GV DV +A YSKD ++R+ + E D+ Sbjct: 587 EVKSTYVKDNYFRVEAAGVINDVNVAVYSKDQIRHIHIWQGSCHHYFREKLGLELSEDEE 646 Query: 534 SQPRQASEGRSHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAG 355 SQ + E ++P+G+V+APMAG ++ VE+GQPV+V+EAMKMEHVVKAP +G Sbjct: 647 SQHKPKVETSANPQGTVVAPMAGLVVKVLVENKTRVEEGQPVLVLEAMKMEHVVKAPSSG 706 Query: 354 YIEGLKATAGQQVFDSSVLFTVKDK 280 Y+ GL+ G+QV D SVLF+VKD+ Sbjct: 707 YVHGLQLMVGEQVSDGSVLFSVKDQ 731
>MCCA_ARATH (Q42523) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial| precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) Length = 734 Score = 108 bits (271), Expect = 1e-23 Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Frame = -1 Query: 714 DVKVDGRSENDFRVEVGGVQTDVTLAFYSKDNSXXXXXXXXXXXXHYRQTMRAEHLLDDS 535 +++V + DFRVE G+ +V+LA Y KD ++Q + E D+ Sbjct: 590 ELRVTRAGKCDFRVEAAGLSMNVSLAAYLKDGYKHIHIWHGSEHHQFKQKVGIEFSEDEE 649 Query: 534 S-QPRQASEGRSHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRA 358 Q R +SE SHP G+++APMAG ++ V+ GQP++V+EAMKMEHVVKAP + Sbjct: 650 GVQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPILVLEAMKMEHVVKAPSS 709 Query: 357 GYIEGLKATAGQQVFDSSVLFTVK 286 G I+ LK AGQQV D S LF +K Sbjct: 710 GSIQDLKVKAGQQVSDGSALFRIK 733
>BCCP_LYCES (P05115) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) (Fragment) Length = 70 Score = 78.6 bits (192), Expect = 2e-14 Identities = 39/70 (55%), Positives = 48/70 (68%) Frame = -1 Query: 492 GSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVF 313 G+V+APM G KDG V++GQPV+V+EAMKMEHVVKAP GY+ GL+ GQ V Sbjct: 1 GTVVAPMVGLEVKVLVKDGEKVQEGQPVLVLEAMKMEHVVKAPANGYVSGLEIKVGQSVQ 60 Query: 312 DSSVLFTVKD 283 D LF +KD Sbjct: 61 DGIKLFALKD 70
>PYC_ASPTE (O93918) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1193 Score = 51.6 bits (122), Expect = 2e-06 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = -1 Query: 546 LDDSSQPRQASEGRSHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKA 367 +D++++P+ A G S G APM+G DG+ V+ G P+ V+ AMKME V+ A Sbjct: 1109 IDNTARPK-ADVGDSSQVG---APMSGVVVEIRVHDGLEVKKGDPLAVLSAMKMEMVISA 1164 Query: 366 PRAGYIEGLKATAGQQV 316 P +G + GL G V Sbjct: 1165 PHSGKVSGLLVKEGDSV 1181
>BCCA_MYCTU (P0A508) Acetyl-/propionyl-coenzyme A carboxylase alpha chain| [Includes: Biotin carboxylase (EC 6.3.4.14); Biotin carboxyl carrier protein (BCCP)] Length = 654 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = -1 Query: 525 RQASEGRSHPK-----GSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPR 361 R+A E + H V++PM G + G + G V+V+EAMKMEH ++AP Sbjct: 570 REAEEHKIHRAVGARPAEVVSPMPGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPV 629 Query: 360 AGYIEGLKATAGQQVFDSSVLFTVKD 283 +G ++ L + G QV VL +KD Sbjct: 630 SGRVQVL-VSVGDQVKVEQVLARIKD 654
>BCCA_MYCBO (P0A509) Acetyl-/propionyl-coenzyme A carboxylase alpha chain| [Includes: Biotin carboxylase (EC 6.3.4.14); Biotin carboxyl carrier protein (BCCP)] Length = 654 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Frame = -1 Query: 525 RQASEGRSHPK-----GSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPR 361 R+A E + H V++PM G + G + G V+V+EAMKMEH ++AP Sbjct: 570 REAEEHKIHRAVGARPAEVVSPMPGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPV 629 Query: 360 AGYIEGLKATAGQQVFDSSVLFTVKD 283 +G ++ L + G QV VL +KD Sbjct: 630 SGRVQVL-VSVGDQVKVEQVLARIKD 654
>PYC1_YEAST (P11154) Pyruvate carboxylase 1 (EC 6.4.1.1) (Pyruvic carboxylase 1)| (PCB 1) Length = 1178 Score = 48.5 bits (114), Expect = 2e-05 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Frame = -1 Query: 564 MRAEHLLDDSSQPRQASEGRS--HPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAM 391 MR + D S + ++ ++ H + APMAG G ++ GQPV V+ AM Sbjct: 1075 MRKIRVADRSQKVETVTKSKADMHDPLHIGAPMAGVIVEVKVHKGSLIKKGQPVAVLSAM 1134 Query: 390 KMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTVKDK 280 KME ++ +P G ++ + + G+ V S +L ++D+ Sbjct: 1135 KMEMIISSPSDGQVKEVFVSDGENVDSSDLLVLLEDQ 1171
>PYC_ASPNG (Q9HES8) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1192 Score = 48.5 bits (114), Expect = 2e-05 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 14/99 (14%) Frame = -1 Query: 570 QTMRAEHLLDDSSQPRQAS--------EGRSHPKGS------VLAPMAGXXXXXXXKDGV 433 QT + E + + + RQ S E + PK V APM+G DG+ Sbjct: 1082 QTGQREVFYEVNGEVRQVSVDDKKASVENTARPKAELGDSSQVGAPMSGVVVEIRVHDGL 1141 Query: 432 HVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQV 316 V+ G P+ V+ AMKME V+ AP +G + L G V Sbjct: 1142 EVKKGDPIAVLSAMKMEMVISAPHSGKVSSLLVKEGDSV 1180
>BCCA_MYCLE (P46392) Acetyl-/propionyl-coenzyme A carboxylase alpha chain| [Includes: Biotin carboxylase (EC 6.3.4.14); Biotin carboxyl carrier protein (BCCP)] Length = 598 Score = 47.8 bits (112), Expect = 3e-05 Identities = 29/80 (36%), Positives = 39/80 (48%) Frame = -1 Query: 525 RQASEGRSHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIE 346 R G + +V APM G +G V G V+V+EAMKME+ V A + G I Sbjct: 519 RGGHTGAATSGDAVTAPMQGTVVKVAVAEGQTVMTGDLVVVLEAMKMENPVTAHKDGIIT 578 Query: 345 GLKATAGQQVFDSSVLFTVK 286 GL AG + +VL +K Sbjct: 579 GLAVEAGTAITQGTVLAEIK 598
>DCOA_SALTI (Q8XGX8) Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)| Length = 590 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Frame = -1 Query: 537 SSQPRQASEGRSHPKGS---VLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKA 367 SS P QA+ P G+ V AP+AG +G V +G ++++EAMKME ++A Sbjct: 508 SSAPVQAAA----PAGAGTPVTAPLAGNIWKVIATEGQSVAEGDVLLILEAMKMETEIRA 563 Query: 366 PRAGYIEGLKATAGQQVFDSSVLFTV 289 +AG + G+ +G V L T+ Sbjct: 564 AQAGTVRGIAVKSGDAVSVGDTLMTL 589
>DCOA_SALTY (Q03030) Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)| Length = 590 Score = 47.0 bits (110), Expect = 6e-05 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Frame = -1 Query: 537 SSQPRQASEGRSHPKGS---VLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKA 367 SS P QA+ P G+ V AP+AG +G V +G ++++EAMKME ++A Sbjct: 508 SSAPVQAAA----PAGAGTPVTAPLAGNIWKVIATEGQTVAEGDVLLILEAMKMETEIRA 563 Query: 366 PRAGYIEGLKATAGQQVFDSSVLFTV 289 +AG + G+ +G V L T+ Sbjct: 564 AQAGTVRGIAVKSGDAVSVGDTLMTL 589
>DCOA_KLEPN (P13187) Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)| Length = 595 Score = 46.2 bits (108), Expect = 1e-04 Identities = 23/66 (34%), Positives = 36/66 (54%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDS 307 V AP+AG +G V G+ ++++EAMKME ++A +AG + G+ AG V Sbjct: 529 VTAPLAGTIWKVLASEGQTVAAGEVLLILEAMKMETEIRAAQAGTVRGIAVKAGDAVAVG 588 Query: 306 SVLFTV 289 L T+ Sbjct: 589 DTLMTL 594
>PYC_SCHPO (Q9UUE1) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1185 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/59 (38%), Positives = 32/59 (54%) Frame = -1 Query: 492 GSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQV 316 G V APM+G K+G V+ G + V+ AMKME V+ AP +G ++ L G V Sbjct: 1115 GHVAAPMSGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQGDSV 1173
>PYCB_METJA (Q58628) Pyruvate carboxylase subunit B (EC 6.4.1.1) (Pyruvic| carboxylase B) Length = 567 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/70 (32%), Positives = 38/70 (54%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQV 316 +G+V +P G K+G V+ G ++V+EAMKMEH +++P G +E + G V Sbjct: 498 EGAVTSPFRGMVTKIKVKEGDKVKKGDVIVVLEAMKMEHPIESPVEGTVERILIDEGDAV 557 Query: 315 FDSSVLFTVK 286 V+ +K Sbjct: 558 NVGDVIMIIK 567
>MCCA_MOUSE (Q99MR8) Methylcrotonoyl-CoA carboxylase subunit alpha,| mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) (3-methylcrotonyl-CoA carboxyla Length = 717 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQ 319 +G +APM G K G V+ G +MV+ AMKMEH +KAP+ G I+ + + G Q Sbjct: 642 QGGTIAPMTGTIEKVFVKAGDRVKAGDSLMVMIAMKMEHTIKAPKDGRIKKVFFSEGAQ 700
>PYCB_METTH (O27179) Pyruvate carboxylase subunit B (EC 6.4.1.1) (Pyruvic| carboxylase B) Length = 568 Score = 44.7 bits (104), Expect = 3e-04 Identities = 21/70 (30%), Positives = 36/70 (51%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQV 316 +G+V + M G +G V G V V+EAMKME+ ++ P G +E + G++V Sbjct: 499 EGAVKSTMQGMVVKLKVSEGDQVNAGDVVAVVEAMKMENDIQTPHGGVVEKIYTAEGEKV 558 Query: 315 FDSSVLFTVK 286 ++ +K Sbjct: 559 ETGDIIMVIK 568
>BCCP_STRMU (P29337) Biotin carboxyl carrier protein (BCCP)| Length = 130 Score = 44.3 bits (103), Expect = 4e-04 Identities = 23/64 (35%), Positives = 34/64 (53%) Frame = -1 Query: 480 APMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSV 301 APM G G V + QP+M++EAMKME+ + A AG + + ++GQ V Sbjct: 66 APMPGTILKVLVNVGDTVSENQPLMILEAMKMENEIVAGMAGTVSAIHVSSGQTVNAGDN 125 Query: 300 LFTV 289 L T+ Sbjct: 126 LITI 129
>GCDC_ACIFE (Q9ZAA7) Glutaconyl-CoA decarboxylase gamma subunit (EC 4.1.1.70)| (Biotin carrier) Length = 145 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = -1 Query: 519 ASEGRSHPKGSVL--APMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIE 346 A + P GSV APM G K G VE G ++++EAMKM++ + AP G + Sbjct: 67 AKPAAAAPAGSVTVSAPMPGKILSVNVKPGDKVEAGDVLLILEAMKMQNEIMAPEDGTVS 126 Query: 345 GLKATAGQQVFDSSVL 298 ++ AG V V+ Sbjct: 127 EVRVNAGDTVATGDVM 142
>BCCP_PROFR (P02904) Methylmalonyl-CoA carboxyltransferase 1.3S subunit (EC| 2.1.3.1) (Biotin carboxyl carrier protein of transcarboxylase) (Transcarboxylase, 1.3S subunit) Length = 123 Score = 43.1 bits (100), Expect = 8e-04 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIE 346 +G + AP+AG K+G V+ GQ V+V+EAMKME + AP G +E Sbjct: 54 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVE 103
>MCCA_HUMAN (Q96RQ3) Methylcrotonoyl-CoA carboxylase subunit alpha,| mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) (3-methylcrotonyl-CoA carboxyla Length = 725 Score = 42.7 bits (99), Expect = 0.001 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -1 Query: 519 ASEGRSHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGL 340 +S +G LAPM G K G V+ G +MV+ AMKMEH +K+P+ G ++ + Sbjct: 638 SSVSSQETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKV 697 Query: 339 KATAGQQ 319 G Q Sbjct: 698 FYREGAQ 704
>PYC2_YEAST (P32327) Pyruvate carboxylase 2 (EC 6.4.1.1) (Pyruvic carboxylase 2)| (PCB 2) Length = 1180 Score = 42.7 bits (99), Expect = 0.001 Identities = 26/76 (34%), Positives = 39/76 (51%) Frame = -1 Query: 501 HPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQ 322 H + APMAG G V+ G+ + V+ AMKME VV +P G ++ + G+ Sbjct: 1099 HDTHQIGAPMAGVIIEVKVHKGSLVKKGESIAVLSAMKMEMVVSSPADGQVKDVFIKDGE 1158 Query: 321 QVFDSSVLFTVKDKST 274 V D+S L V ++ T Sbjct: 1159 SV-DASDLLVVLEEET 1173
>PYC_PICAN (Q8X1T3) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1175 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = -1 Query: 504 SHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYI 349 +H V APMAG GV V+ G P+ V+ AMKME V+ +P +G + Sbjct: 1102 AHNPNEVGAPMAGVVIEVRVHPGVEVKKGDPLCVLSAMKMEMVISSPVSGRV 1153
>PYC_RAT (P52873) Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1)| (Pyruvic carboxylase) (PCB) Length = 1178 Score = 42.4 bits (98), Expect = 0.001 Identities = 23/55 (41%), Positives = 28/55 (50%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKAT 331 KG + APM G G V GQP+ V+ AMKME VV +P G I + T Sbjct: 1109 KGQIGAPMPGKVIDVKVAAGAKVVKGQPLCVLSAMKMETVVTSPMEGTIRKVHVT 1163
>PYC_HUMAN (P11498) Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1)| (Pyruvic carboxylase) (PCB) Length = 1178 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/55 (40%), Positives = 28/55 (50%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKAT 331 KG + APM G G V GQP+ V+ AMKME VV +P G + + T Sbjct: 1109 KGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVT 1163
>PYC_MOUSE (Q05920) Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1)| (Pyruvic carboxylase) (PCB) Length = 1178 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/55 (41%), Positives = 28/55 (50%) Frame = -1 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKAT 331 KG + APM G G V GQP+ V+ AMKME VV +P G I + T Sbjct: 1109 KGQIGAPMPGKVIDIKVAAGDKVAKGQPLCVLSAMKMETVVTSPMEGTIRKVHVT 1163
>PYC_PICPA (P78992) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1189 Score = 40.8 bits (94), Expect = 0.004 Identities = 22/69 (31%), Positives = 33/69 (47%) Frame = -1 Query: 504 SHPKGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAG 325 +H + APMAG + V+ G P+ V+ AMKME V+ +P AG I + Sbjct: 1102 AHNPNEIGAPMAGVVVEVRVHENGEVKKGDPIAVLSAMKMEMVISSPVAGRIGQIAVKEN 1161 Query: 324 QQVFDSSVL 298 V S ++ Sbjct: 1162 DSVDASDLI 1170
>PCCA_CAEEL (Q19842) Propionyl-CoA carboxylase alpha chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide ligase alpha subunit) Length = 724 Score = 40.8 bits (94), Expect = 0.004 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDS 307 VL+PM G K G V +GQ ++V+EAMKM++ + A + G ++ + G V + Sbjct: 658 VLSPMPGAIKNVNVKPGDMVSEGQELVVMEAMKMQNSLHAGKTGRVKAVNVKVGATVDEG 717 Query: 306 SVL 298 VL Sbjct: 718 EVL 720
>PCCA_CAEBR (Q612F5) Propionyl-CoA carboxylase alpha chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide ligase alpha subunit) Length = 738 Score = 40.8 bits (94), Expect = 0.004 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDS 307 VL+PM G K G V +GQ ++V+EAMKM++ + A + G ++ + G V + Sbjct: 672 VLSPMPGAIKNVNVKPGDMVSEGQELVVMEAMKMQNSLHAGKTGRVKAVNVKVGATVDEG 731 Query: 306 SVL 298 VL Sbjct: 732 EVL 734
>PYC_BACSU (Q9KWU4) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PYC) Length = 1148 Score = 39.7 bits (91), Expect = 0.009 Identities = 32/130 (24%), Positives = 56/130 (43%) Frame = -1 Query: 675 VEVGGVQTDVTLAFYSKDNSXXXXXXXXXXXXHYRQTMRAEHLLDDSSQPRQASEGRSHP 496 + +G Q D T Y + N R+ + + + S Q R ++ R++P Sbjct: 1031 ISIGEPQPDATRVVYFELNGQP------------REVVIKDESIKSSVQERLKAD-RTNP 1077 Query: 495 KGSVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQV 316 + A M G + G V G +M+ EAMKME V+AP +G I+ + G+ + Sbjct: 1078 S-HIAASMPGTVIKVLAEAGTKVNKGDHLMINEAMKMETTVQAPFSGTIKQVHVKNGEPI 1136 Query: 315 FDSSVLFTVK 286 +L ++ Sbjct: 1137 QTGDLLLEIE 1146
>PCCA_HUMAN (P05165) Propionyl-CoA carboxylase alpha chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide ligase alpha subunit) Length = 703 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = -1 Query: 480 APMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSV 301 +PM G K G V +GQ + VIEAMKM++ + A + G ++ + AG V + + Sbjct: 639 SPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDL 698 Query: 300 L 298 L Sbjct: 699 L 699
>PCCA_MOUSE (Q91ZA3) Propionyl-CoA carboxylase alpha chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide ligase alpha subunit) Length = 724 Score = 37.7 bits (86), Expect = 0.035 Identities = 21/64 (32%), Positives = 35/64 (54%) Frame = -1 Query: 489 SVLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFD 310 ++ +PM G K G V +GQ + VIEAMKM++ + A + G ++ + AG V + Sbjct: 657 TLCSPMPGVVVAVSVKPGDMVAEGQEICVIEAMKMQNSMTAGKMGKVKLVHCKAGDTVGE 716 Query: 309 SSVL 298 +L Sbjct: 717 GDLL 720
>PCCA_RAT (P14882) Propionyl-CoA carboxylase alpha chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase alpha subunit) (Propanoyl-CoA:carbon dioxide ligase alpha subunit) (Fragment) Length = 704 Score = 35.0 bits (79), Expect = 0.23 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -1 Query: 480 APMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSV 301 +P G K G V +GQ + VIEAMKM++ + A + G ++ + AG V + + Sbjct: 640 SPKPGVVVAVSVKPGDMVAEGQEICVIEAMKMQNSMTAGKMGKVKLVHCKAGDTVGEGDL 699 Query: 300 L 298 L Sbjct: 700 L 700
>DUR1_YEAST (P32528) Urea amidolyase [Includes: Urea carboxylase (EC 6.3.4.6);| Allophanate hydrolase (EC 3.5.1.54)] Length = 1835 Score = 35.0 bits (79), Expect = 0.23 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = -1 Query: 513 EGRSHPKGS--VLAPMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGL 340 E P+G+ V + +G G +E GQ +++IEAMK E ++ AP++G I + Sbjct: 1755 EEEDFPEGAEIVYSEYSGRFWKSIASVGDVIEAGQGLLIIEAMKAEMIISAPKSGKIIKI 1814 Query: 339 KATAGQQVFDSSVLFTVK 286 G V ++ ++ Sbjct: 1815 CHGNGDMVDSGDIVAVIE 1832
>BCCP_PSEAE (P37799) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 33.5 bits (75), Expect = 0.67 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -1 Query: 438 GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTV 289 G V+ G + ++EAMKM + ++A +G IE + GQ V LFT+ Sbjct: 106 GQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTI 155
>ODP2_MYCCT (Q49110) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 438 Score = 32.3 bits (72), Expect = 1.5 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = -1 Query: 429 VEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTVKDKS 277 V++GQ + +E K+ + AP AG I + AGQ++ V+ ++D S Sbjct: 29 VKEGQSLYFVETDKVNSEIPAPVAGKIAVINIKAGQEIKVGDVVMEIEDGS 79
>T341_ECOLI (P11257) Transposase for insertion sequence element IS3411| Length = 240 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = -2 Query: 575 TGRP*ELSICLMTVLSQGRLPREGHIQKEVFWHQWLVWSLRFCLRMGYMWKMVSLSWLSK 396 T RP SI ++ VLS R P ++K +WHQ V + R R W+ S+ + + Sbjct: 184 TRRPPARSITVIKVLSMYRWPTHSGLRKPDYWHQQEVQATRMTTR----WRRASMVFTKR 239 Query: 395 Q 393 + Sbjct: 240 R 240
>BCCP_SHIFL (P0ABE1) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKD-------GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATA 328 V +PM G D G V G + ++EAMKM + ++A ++G ++ + + Sbjct: 83 VRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVES 142 Query: 327 GQQV-FDSSVL 298 GQ V FD ++ Sbjct: 143 GQPVEFDEPLV 153
>BCCP_ECOLI (P0ABD8) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKD-------GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATA 328 V +PM G D G V G + ++EAMKM + ++A ++G ++ + + Sbjct: 83 VRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVES 142 Query: 327 GQQV-FDSSVL 298 GQ V FD ++ Sbjct: 143 GQPVEFDEPLV 153
>BCCP_ECOL6 (P0ABD9) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKD-------GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATA 328 V +PM G D G V G + ++EAMKM + ++A ++G ++ + + Sbjct: 83 VRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVES 142 Query: 327 GQQV-FDSSVL 298 GQ V FD ++ Sbjct: 143 GQPVEFDEPLV 153
>BCCP_ECO57 (P0ABE0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Frame = -1 Query: 486 VLAPMAGXXXXXXXKD-------GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATA 328 V +PM G D G V G + ++EAMKM + ++A ++G ++ + + Sbjct: 83 VRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVES 142 Query: 327 GQQV-FDSSVL 298 GQ V FD ++ Sbjct: 143 GQPVEFDEPLV 153
>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 262 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = -1 Query: 438 GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTVK 286 G V+ GQ V +IEAMK+ + ++A ++G I + A + V + LF ++ Sbjct: 211 GDKVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSVDTPLFVIQ 261
>BCCP_CHLMU (Q9PKR5) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 163 Score = 31.6 bits (70), Expect = 2.5 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -1 Query: 429 VEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTV 289 V + V ++EAMK+ + VKA AG +E + T G V S LF + Sbjct: 114 VSEDTVVCIVEAMKVMNEVKAGMAGRVEEVLITNGDPVQFGSKLFRI 160
>BCCP_CHLTR (O84125) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 164 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 438 GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTV 289 G V + V ++EAMK+ + VKA +G +E + T G V S LF + Sbjct: 112 GDTVSEDTVVCIVEAMKVMNEVKAGMSGRVEEILITNGDPVQFGSKLFRI 161
>BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 280 Score = 30.4 bits (67), Expect = 5.7 Identities = 15/51 (29%), Positives = 29/51 (56%) Frame = -1 Query: 438 GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVFDSSVLFTVK 286 G V+ GQ + ++EAMK+ + +++ G + + A G+ V + LF V+ Sbjct: 229 GDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQ 279
>NU2M_ELEMA (Q2I3H3) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = -2 Query: 623 IIANIYTSGMGSITIITGRP*ELSICLM-TVLSQGRLP 513 I+AN +T+ M S+T++ + ++I LM T+LS G LP Sbjct: 218 ILANTFTTSMSSLTLMWNKTPAMTIMLMTTLLSLGGLP 255
>POLG_DEN2N (P14340) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 30.0 bits (66), Expect = 7.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P LKQN + WC +TS W+ Sbjct: 162 TITYKCPFLKQNEPEDIDCWCNSTSTWV 189
>POLG_DEN2P (P12823) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3388 Score = 30.0 bits (66), Expect = 7.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P LKQN + WC +TS W+ Sbjct: 162 TITYKCPFLKQNEPEDIDCWCNSTSTWV 189
>MMP15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)| (MMP-15) (Membrane-type matrix metalloproteinase 2) (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix metalloproteinase) (MT2-MMP) (MT2MMP) Length = 657 Score = 30.0 bits (66), Expect = 7.4 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Frame = +3 Query: 348 LYNLPEA---PSRHAPSSLLR*P*QADHLP----HVPHP*AKP*RPNQPLVP 482 LY P+ P+R P+ R P + DH P PHP KP RP +P P Sbjct: 298 LYGSPDGKPQPTRPLPTVRPRRPGRPDHQPPRPPQPPHPGGKPERPPKPGPP 349
>BCCP_HAEIN (P43874) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 155 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 438 GVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQV-FDSSVL 298 G V+ G + ++EAMKM + ++A +AG ++ + G V FD ++ Sbjct: 105 GQSVKVGDALCIVEAMKMMNRIEADKAGVVKAILINDGNAVEFDEPLI 152
>COAC_YEAST (Q00955) Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2233 Score = 30.0 bits (66), Expect = 7.4 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 477 PMAGXXXXXXXKDGVHVEDGQPVMVIEAMKMEHVVKAPRAGYIEGLKATAGQQVF-DSSV 301 P G ++G H+ GQP IE MKM+ + + G ++ LK V D Sbjct: 706 PSPGKLVKFLVENGEHIIKGQPYAEIEVMKMQMPLVSQENGIVQLLKQPGSTIVAGDIMA 765 Query: 300 LFTVKDKS 277 + T+ D S Sbjct: 766 IMTLDDPS 773
>POLG_DEN2J (P07564) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P+L+QN + WC +TS W+ Sbjct: 162 TITYKCPLLRQNEPEDIDCWCNSTSTWV 189
>POLG_DEN27 (P29991) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P+L+QN + WC +TS W+ Sbjct: 162 TITYKCPLLRQNEPEDIDCWCNSTSTWV 189
>POLG_DEN26 (P29990) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P+L+QN + WC +TS W+ Sbjct: 162 TITYKCPLLRQNEPEDIDCWCNSTSTWV 189
>POLG_DEN2U (P18356) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 679 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P+L+QN + WC +TS W+ Sbjct: 62 TITYKCPLLRQNEPEDIDCWCNSTSTWV 89
>GP158_HUMAN (Q5T848) Probable G-protein coupled receptor 158 precursor| Length = 1215 Score = 29.6 bits (65), Expect = 9.7 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -2 Query: 542 MTVLSQGRLPREGHIQKEVFWHQWLVWSL 456 + V+ Q RE ++Q ++ W+Q LVWSL Sbjct: 136 LNVMLQSNKSREQNLQDDLDWYQALVWSL 164
>POLG_DEN2D (P30026) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 1127 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 418 TIFHMYPILKQNLNDQTSHWCQNTSFWM 501 TI + P+L+QN + WC +TS W+ Sbjct: 162 TITYKCPLLRQNEPEDIDCWCNSTSTWV 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,844,743 Number of Sequences: 219361 Number of extensions: 2299753 Number of successful extensions: 5315 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 5106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5310 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
