ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18c15 |
|---|---|
| Clone Library Name | barley_pub |
>MINK1_HUMAN (Q8N4C8) Misshapen-like kinase 1 (EC 2.7.11.1) (Mitogen-activated| protein kinase kinase kinase kinase 6) (MAPK/ERK kinase kinase kinase 6) (MEK kinase kinase 6) (MEKKK 6) (Misshapen/NIK-related kinase) (GCK family kinase MiNK) Length = 1332 Score = 32.7 bits (73), Expect = 1.4 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +3 Query: 81 QMQ*NPLTHARPGSSKPNPPCSYGSPGHDLPRLVLPLSPSTTTPLQR 221 + Q +PL ++PGS+ P PP SPG P S T P+QR Sbjct: 531 KQQNSPLAKSKPGSTGPEPPIPQASPGPPGPL-------SQTPPMQR 570
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 32.3 bits (72), Expect = 1.9 Identities = 26/93 (27%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Frame = +3 Query: 222 CCLCRHYRAPPCPMWCCIPRRYRP--CPAWCCIPRRLHLVLSHPS---PEAFNPSAAAES 386 CC YR C CC P+ +P C CC P HP PS S Sbjct: 55 CCRTTCYRPSCCVSSCCRPQCCQPVCCQPTCCRPSCCETTCCHPRCCISSCCRPSCCVSS 114 Query: 387 ITGGLPNCVGCVSHISSCPGAPASISLSFKLYC 485 P C V +C SIS + C Sbjct: 115 CC--KPQCCQSVCCQPNCCRPSCSISSCCRPSC 145 Score = 30.0 bits (66), Expect = 9.2 Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 5/85 (5%) Frame = +3 Query: 201 TTTPLQRCCLCRHYRAPPCPMWCCIPRRYRP--CPAWCCIPRRLHLVLSHPS---PEAFN 365 TT CC+ R C CC P RP C CC PR PS Sbjct: 58 TTCYRPSCCVSSCCRPQCCQPVCCQPTCCRPSCCETTCCHPRCCISSCCRPSCCVSSCCK 117 Query: 366 PSAAAESITGGLPNCVGCVSHISSC 440 P PNC ISSC Sbjct: 118 PQCCQSVCC--QPNCCRPSCSISSC 140
>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 628 Score = 32.3 bits (72), Expect = 1.9 Identities = 45/169 (26%), Positives = 58/169 (34%), Gaps = 23/169 (13%) Frame = +3 Query: 12 RSPPRTVNSRRDTAIG*LQNGSTQMQ*NPLTHARPGSSKPN----------PPCSYGSPG 161 RS PR SR D + N LT P S + + PC +P Sbjct: 347 RSDPRLSRSRSDLFLPPSPESPPSWGDN-LTRVNPFSLREDLRGGKIKLLDTPCKPATP- 404 Query: 162 HDLPRLVLPLSPSTTTPLQRCCLCRHYRAPPCPMWCCIPRRYRPCPAWCCIPRRLHLVLS 341 LP ++P SP T+T L P P+ RR R P+ +PRR+ L Sbjct: 405 --LP--LVPPSPLTSTQLPLVASPESLVQPETPV-----RRCRSLPSSPELPRRMETALP 455 Query: 342 HPSPEAFNPSAAAESITGG-------------LPNCVGCVSHISSCPGA 449 P P PS G LP V + IS+C A Sbjct: 456 GPGPSPVGPSTEERMDCEGSSPEPEPPGPAPQLPLAVATDNFISTCSSA 504
>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein| Length = 145 Score = 32.0 bits (71), Expect = 2.4 Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 8/72 (11%) Frame = +3 Query: 129 PNPPCSYGSPGHDLPRLVLPLSPSTT-------TPLQRCCLCRHYRAPPCPMWCCIPRRY 287 P P C SP P SP T TP C A PCPM C P + Sbjct: 24 PKPCCLQKSPCCPKSPCCPPKSPCCTPKVCPCPTPCPCPATCPAACACPCPMKPCCPTKC 83 Query: 288 RPCPAWC-CIPR 320 CP C C P+ Sbjct: 84 TCCPKKCTCCPQ 95
>NLTP_CHICK (Q07598) Nonspecific lipid-transfer protein, mitochondrial| precursor (EC 2.3.1.176) (Propanoyl-CoA C-acyltransferase) (NSL-TP) (Sterol carrier protein 2) (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi) (SCPX) (Fragment) Length = 547 Score = 31.6 bits (70), Expect = 3.2 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -1 Query: 373 ADGLKASGDGCDSTRWSRRGMQHHAGQGLYRRGMQHHMGQGGAL 242 A GL S + C W RG+ G RR +QH++G GGA+ Sbjct: 362 ATGLAQSAELC----WQLRGLAGRREVGGARRALQHNLGLGGAV 401
>ENV_MLVCB (P08360) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Spike protein p15E; R protein] Length = 661 Score = 31.6 bits (70), Expect = 3.2 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 19/112 (16%) Frame = +3 Query: 114 PGSSKPNPPCSYGSPG------HDLPRLVLPLSPSTTTPLQRCCLCRHYRAPPCPMWCCI 275 P SS P PPC G G D + SP T R L R AP + C Sbjct: 94 PYSSPPGPPCCSGDAGAVSGCARDCDEPLTSYSPRCNTAWNRLKLARVTHAPKEGFYIC- 152 Query: 276 PRRYRP-------------CPAWCCIPRRLHLVLSHPSPEAFNPSAAAESIT 392 P +RP C +W C A+NP+++ + IT Sbjct: 153 PGSHRPRWARSCGGLDAYYCASWGC---------ETTGRAAWNPTSSWDYIT 195
>KIF12_HUMAN (Q96FN5) Kinesin-like protein KIF12| Length = 646 Score = 31.2 bits (69), Expect = 4.1 Identities = 26/90 (28%), Positives = 34/90 (37%) Frame = +3 Query: 135 PPCSYGSPGHDLPRLVLPLSPSTTTPLQRCCLCRHYRAPPCPMWCCIPRRYRPCPAWCCI 314 PPC P L+ P P P C C H CP+ C +P + W C+ Sbjct: 479 PPC---------PCLMAPAPPCHALPPLYSCPCCHI----CPL-CRVPLAH-----WACL 519 Query: 315 PRRLHLVLSHPSPEAFNPSAAAESITGGLP 404 P HL P+ +P A +GG P Sbjct: 520 PGEHHL------PQVLDPEA-----SGGRP 538
>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated| protein 10.1) (High sulfur keratin-associated protein 10.1) (Keratin-associated protein 18-1) (Keratin-associated protein 18.1) Length = 282 Score = 31.2 bits (69), Expect = 4.1 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Frame = +3 Query: 222 CCLCRHYRAPPCPMWCCIPRRYRP--CPAWCCIP 317 CC + PC CC+P R +P C CC+P Sbjct: 173 CCT-----SSPCQQACCVPVRCKPVCCKPICCVP 201
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 31.2 bits (69), Expect = 4.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 281 PVQTLPRMVLHPSPAPPRTIASIARGLQP 367 P Q P+ + H SP P T+ S+ +G+QP Sbjct: 4002 PQQQHPQQLSHSSPCKPNTLVSVNQGVQP 4030
>TESK1_MOUSE (O70146) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 627 Score = 30.8 bits (68), Expect = 5.4 Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 12/116 (10%) Frame = +3 Query: 138 PCSYGSPGHDLPRLVLPLSPSTTTPLQRCCLCRHYRAPPCPMWCCIPRRYRPCPAWCCIP 317 PC +P LP ++P SP T+T L P P+ RR R P+ +P Sbjct: 398 PCKPATP---LP--LVPPSPLTSTQLPLVTTPDILVQPETPV-----RRCRSLPSSPELP 447 Query: 318 RRLHLVLSHPSPEAFNPSAAAESITGG------------LPNCVGCVSHISSCPGA 449 RR+ L P P P+ G LP V + IS+C A Sbjct: 448 RRMETALPGPGPSPMGPTEERMDCEGSSPEPEPPGLAPQLPLAVATDNFISTCSSA 503
>FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear factor) (MNF)| Length = 617 Score = 30.8 bits (68), Expect = 5.4 Identities = 25/101 (24%), Positives = 40/101 (39%) Frame = +3 Query: 150 GSPGHDLPRLVLPLSPSTTTPLQRCCLCRHYRAPPCPMWCCIPRRYRPCPAWCCIPRRLH 329 G+P LP+ PST +Q L AP P+ P+ P ++H Sbjct: 162 GAPALQLPQQCTFRFPSTAIKIQFTSLYHKEEAPASPLRPLYPQ---------ISPLKIH 212 Query: 330 LVLSHPSPEAFNPSAAAESITGGLPNCVGCVSHISSCPGAP 452 + P P+ S+ +P+ G +S +SCP +P Sbjct: 213 I----PEPD-------LRSLVSPIPSPTGTISVPNSCPASP 242
>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded| at second protein) Length = 1693 Score = 30.8 bits (68), Expect = 5.4 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Frame = +3 Query: 249 PPCPMWCCIPRRYRPCPAWCCIPRRLHLV----LSHPSPEAFNPSAAAESITGGLPNCV- 413 P C W +P ++P P CC P + V S+ + N S ++TG +C Sbjct: 798 PHCIRWEPVPADFKPSPPNCC-PESMRCVDNGTCSYQGVQIENWSPVPANLTGCDQHCYC 856 Query: 414 --GCVSHISSCPGAPA 455 G V ++CP PA Sbjct: 857 ENGRVECRAACPPVPA 872
>ATP8_MYOGL (O63902) ATP synthase protein 8 (EC 3.6.3.14) (ATPase subunit 8)| (A6L) Length = 67 Score = 30.8 bits (68), Expect = 5.4 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%) Frame = +1 Query: 325 STSYYRIHRQ--RPSTHLLLPNPSPEDFQTV 411 STS+ IHR + +TH+ PNP+P+D +T+ Sbjct: 15 STSFSIIHRLQLKLTTHIFSPNPTPKDLKTL 45
>EPHB3_HUMAN (P54753) Ephrin type-B receptor 3 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor HEK-2) Length = 998 Score = 30.4 bits (67), Expect = 7.0 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 108 ARPGSSKPNPPCSYGSPGHDLPRLVLPLSPSTTTPLQRCCLCRH--YRA 248 A+ +P PP SY + + P L P + TT+P C C + YRA Sbjct: 279 AKESQCRPCPPGSYKAKQGEGPCLPCPPNSRTTSPAASICTCHNNFYRA 327
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.4 bits (67), Expect = 7.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 66 QNGSTQMQ*NPLTHARPGSSKPNPPCSYGSPGHDLPRLVLPLSPSTTTP 212 Q+G Q+ +P H RP + P PP G G+ P P SP + P Sbjct: 1320 QHGPGQVPPSPQQHVRPAAGAPYPP---GGSGYPTPVSRTPGSPYPSQP 1365
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 30.4 bits (67), Expect = 7.0 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = +3 Query: 186 PLSPSTTTPLQRCCLCRHYRAPPCPMWCCIPRRYRPCPAWCCIP 317 P PS T P C +Y P CCI + C AW C P Sbjct: 355 PTPPSPTPPPTVCD--NYYTCPDSTTCCCIYEYGKYCYAWGCCP 396
>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)| Length = 356 Score = 30.4 bits (67), Expect = 7.0 Identities = 25/72 (34%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Frame = +3 Query: 96 PLTHARPGSSKPNPPCSYGSPGHD----LPRLVLPLSPSTTTPLQRCCLCRHYRAPPCPM 263 PL PG P PP GS G LP TTP Q C L + PPC Sbjct: 116 PLETECPGCCIPGPPGPRGSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPPC-- 173 Query: 264 WCCIPRRYRPCP 299 RPCP Sbjct: 174 --------RPCP 177
>ENV2_MOUSE (P11370) Retrovirus-related Env polyprotein from Fv-4 locus| Length = 679 Score = 30.0 bits (66), Expect = 9.2 Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 6/77 (7%) Frame = +3 Query: 99 LTHARPGSSKPNPPCSYGSPG------HDLPRLVLPLSPSTTTPLQRCCLCRHYRAPPCP 260 L + P SS P PPC G G D + SP T R L + AP Sbjct: 89 LDNRPPYSSPPGPPCCSGDKGAVSGCARDCDEPLTSYSPRCNTAWNRMKLAQVTHAPKEG 148 Query: 261 MWCCIPRRYRPCPAWCC 311 + C P +RP A C Sbjct: 149 FYVC-PGSHRPRWARSC 164
>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein| 4.7) (Ultrahigh sulfur keratin-associated protein 4.7) Length = 210 Score = 30.0 bits (66), Expect = 9.2 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Frame = +3 Query: 201 TTTPLQRCCLCRHYRAPPCPMWCCIPRRYRP--CPAWCCIPR 320 TT CC+ R C CC P RP C CC PR Sbjct: 37 TTCYRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCETTCCHPR 78
>KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-associated| protein 4.15) (Ultrahigh sulfur keratin-associated protein 4.15) (Fragment) Length = 193 Score = 30.0 bits (66), Expect = 9.2 Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 10/84 (11%) Frame = +3 Query: 222 CCLCRHYRAPPCPMWCCIPRRYRP--CPAWCCIPRRLHLVLSHPSPEAFNPSAAAESITG 395 CC+ R R+ C CC P RP C + CC P P P + G Sbjct: 107 CCVSRCCRSQCCQSVCCQPTCCRPSCCISSCCRPSCCESSCCRPC--CCRPCCCLRPVCG 164 Query: 396 GL--------PNCVGCVSHISSCP 443 + P CV IS+CP Sbjct: 165 RVSCHTTCYRPTCV-----ISTCP 183
>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated| protein 4.14) (Ultrahigh sulfur keratin-associated protein 4.14) Length = 195 Score = 30.0 bits (66), Expect = 9.2 Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 16/91 (17%) Frame = +3 Query: 219 RCCLCRHYRAPPCPMWCCIPRRYRPCPAWCCIPRRLHLVLSHPS--------PEAFNPSA 374 RCC+ R C CC P + C + CC P H S S P Sbjct: 103 RCCISSCCRPSCCVSSCCRP---QCCQSVCCQPTCCHPSCSISSCCRPSCCESSCCRPCC 159 Query: 375 AAESITGGL--------PNCVGCVSHISSCP 443 + GG+ P CV ISSCP Sbjct: 160 CLRPVCGGVSCHTTCYRPTCV-----ISSCP 185
>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)| Length = 1679 Score = 30.0 bits (66), Expect = 9.2 Identities = 23/98 (23%), Positives = 32/98 (32%), Gaps = 24/98 (24%) Frame = +3 Query: 219 RCCLCRHYRAPPCPMWCCIPRRYR-------PCPAWC-------------CIPRRLHL-- 332 +C C HYR + C PR + PC C C P LH+ Sbjct: 983 QCVACSHYRLDNTCVSRCPPRSFPNQVGICWPCHDTCETCAGAGPDSCLTCAPAHLHVID 1042 Query: 333 --VLSHPSPEAFNPSAAAESITGGLPNCVGCVSHISSC 440 V P+ + ++ + PNC C H C Sbjct: 1043 LAVCLQFCPDGYFENSRNRTCVPCEPNCASCQDHPEYC 1080 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 126,416,537 Number of Sequences: 219361 Number of extensions: 2962707 Number of successful extensions: 8870 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 7892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8839 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 9087521996 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
