ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18c14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 218 bits (110), Expect = 1e-53 Identities = 299/362 (82%) Strand = Plus / Minus Query: 141 accatcatgagcatatccatcaggagttgggcttcaaacattattggccctaaggatggt 200 |||| ||| ||||||||||||| || |||||||||||||||| ||| |||| || ||| Sbjct: 1033 accaacatcagcatatccatcatcagctgggcttcaaacattactggtcctagtgaaggt 974 Query: 201 ccaatcacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttc 260 |||| || || |||||||| || | ||| |||||||| || | | ||||||||||| Sbjct: 973 ccaaccagtatctctatgatgatgaccttccctccctcctctcgtgatggaatggccttt 914 Query: 261 ttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagcacaagctta 320 ||||||| || ||||| ||||||||||| ||||||||||| ||| | |||||||| Sbjct: 913 ctgcactgagtcaagatcttcacgcaatcatcatcgctccagtggtgcaatacaagcttg 854 Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 ||||| |||||||||| | ||| ||||||||||||| |||||| || |||||||||||| Sbjct: 853 agcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagttaacg 794 Query: 381 acaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtgcacttgatg 440 |||||||| || || || |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 793 acaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcacttgaca 734 Query: 441 tgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcagcagtcagtc 500 || || || |||||| ||| ||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 733 tgagggtaggccttggcgatggccctcgccgtcgtgccgtcgccgccgcagcagtcggtc 674 Query: 501 ag 502 || Sbjct: 673 ag 672
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 218 bits (110), Expect = 1e-53 Identities = 299/362 (82%) Strand = Plus / Minus Query: 141 accatcatgagcatatccatcaggagttgggcttcaaacattattggccctaaggatggt 200 |||| ||| ||||||||||||| || |||||||||||||||| ||| |||| || ||| Sbjct: 1038 accaacatcagcatatccatcatcagctgggcttcaaacattactggtcctagtgaaggt 979 Query: 201 ccaatcacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttc 260 |||| || || |||||||| || | ||| |||||||| || | | ||||||||||| Sbjct: 978 ccaaccagtatctctatgatgatgaccttccctccctcctctcgtgatggaatggccttt 919 Query: 261 ttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagcacaagctta 320 ||||||| || ||||| ||||||||||| ||||||||||| ||| | |||||||| Sbjct: 918 ctgcactgagtcaagatcttcacgcaatcatcatcgctccagtggtgcaatacaagcttg 859 Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 ||||| |||||||||| | ||| ||||||||||||| |||||| || |||||||||||| Sbjct: 858 agcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagttaacg 799 Query: 381 acaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtgcacttgatg 440 |||||||| || || || |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 798 acaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcacttgaca 739 Query: 441 tgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcagcagtcagtc 500 || || || |||||| ||| ||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 738 tgagggtaggccttggcgatggccctcgccgtcgtgccgtcgccgccgcagcagtcggtc 679 Query: 501 ag 502 || Sbjct: 678 ag 677
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 184 bits (93), Expect = 2e-43 Identities = 207/245 (84%) Strand = Plus / Minus Query: 252 atggccttcttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagc 311 |||||||||||||| || | | ||| || | ||||||||| |||||||| |||||||| Sbjct: 280 atggccttcttgcattgagcgaggatcttgatgcaatcctcgtcgctccagaagtgtaga 221 Query: 312 acaagcttaagcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctaca 371 |||||||| ||||||||||| |||| | ||||||||| ||||| |||||||| || ||| Sbjct: 220 acaagcttgagcatgacggcctgagctggtgggacggtatggaagaggtcaccagcgaca 161 Query: 372 tagttaacgacaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtg 431 |||||||| |||||||| ||||| |||| ||||||||||| |||||||||||||| || Sbjct: 160 tagttaacaacaccatcacttgggactttctcgatcacctttggaaggtccaacacattg 101 Query: 432 cacttgatgtgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcag 491 |||||||| ||||| | |||||||||| |||||| || ||||| ||||| ||||| ||| Sbjct: 100 cacttgatatgcgggaaggccttgacgatggcccttgcggtcgtcccatcaccaccacag 41 Query: 492 cagtc 496 ||||| Sbjct: 40 cagtc 36
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 ||||| |||||||||| | ||| ||||||||||||| |||||| || |||||||||||| Sbjct: 119693 agcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagttaacg 119634 Query: 381 acaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtgcacttgatg 440 |||||||| || || || |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 119633 acaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcacttgaca 119574 Query: 441 tgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcagcagtcagtc 500 || || || |||||| ||| ||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 119573 tgagggtaggccttggcgatggccctcgccgtcgtgccgtcgccgccgcagcagtcggtc 119514 Query: 501 ag 502 || Sbjct: 119513 ag 119512 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 141 accatcatgagcatatccatcaggagttgggcttcaaacattattggccctaaggatggt 200 |||| ||| ||||||||||||| || |||||||||||||||| ||| |||| || ||| Sbjct: 123040 accaacatcagcatatccatcatcagctgggcttcaaacattactggtcctagtgaaggt 122981 Query: 201 ccaatcacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttc 260 |||| || || |||||||| || | ||| |||||||| || | | ||||||||||| Sbjct: 122980 ccaaccagtatctctatgatgatgaccttccctccctcctctcgtgatggaatggccttt 122921 Query: 261 ttgcactgggttaagattttcacgcaatcctcatcgctcca 301 ||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 122920 ctgcactgagtcaagatcttcacgcaatcatcatcgctcca 122880 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgt 472 |||||||||| ||| ||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 63901 ggaaggtccagcaccgtgcacttgatgtgcgggtacgccttgacgatggccctcgccgt 63843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Minus Query: 41 tcgagctcccagtttcctcacaattttatagtctttgaaccctgcttccatgaatagctt 100 |||||| || |||||| ||||||| |||||||| |||| |||||| |||||| || | Sbjct: 64454 tcgagcaccaagtttcttcacaatcttatagtcactgaatcctgctgtcatgaacaggtc 64395 Query: 101 gcgccagtcattttcactccgttggacccctcttgttgtcaccatcatgagcatatccat 160 |||| |||||||| ||||||| ||||| || |||||||||||||||| ||||| Sbjct: 64394 atgccaatcattttcgttccgttgacgacctctagtattcaccatcatgagcatgtccat 64335 Query: 161 caggagttgggcttcaaacattattggccctaaggatggt 200 || ||| || ||||| ||||||| ||||| || |||||| Sbjct: 64334 catgagctgcgcttcgaacattacaggccccaaagatggt 64295 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 403 cgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacgaggg 462 ||||||||| |||||||||| ||||||||||||||| ||| | ||| |||||| || Sbjct: 130810 cgatcacctgaggaaggtccagcacggtgcacttgattcccgggaatgccctgacgatgg 130869 Query: 463 ccctcgccgtcgtaccatcgccaccgcagcagtc 496 ||||||||| || || ||||| |||| |||||| Sbjct: 130870 ccctcgccgccgcgccgtcgcctccgccgcagtc 130903
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 ||||| |||||||||| | ||| ||||||||||||| |||||| || |||||||||||| Sbjct: 5442 agcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagttaacg 5383 Query: 381 acaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtgcacttgatg 440 |||||||| || || || |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 5382 acaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcacttgaca 5323 Query: 441 tgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcagcagtcagtc 500 || || || |||||| ||| ||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 5322 tgagggtaggccttggcgatggccctcgccgtcgtgccgtcgccgccgcagcagtcggtc 5263 Query: 501 ag 502 || Sbjct: 5262 ag 5261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 141 accatcatgagcatatccatcaggagttgggcttcaaacattattggccctaaggatggt 200 |||| ||| ||||||||||||| || |||||||||||||||| ||| |||| || ||| Sbjct: 8789 accaacatcagcatatccatcatcagctgggcttcaaacattactggtcctagtgaaggt 8730 Query: 201 ccaatcacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttc 260 |||| || || |||||||| || | ||| |||||||| || | | ||||||||||| Sbjct: 8729 ccaaccagtatctctatgatgatgaccttccctccctcctctcgtgatggaatggccttt 8670 Query: 261 ttgcactgggttaagattttcacgcaatcctcatcgctcca 301 ||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 8669 ctgcactgagtcaagatcttcacgcaatcatcatcgctcca 8629 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||||||||| ||| |||||||||| ||| || | |||| ||||| || |||||||||| Sbjct: 60606 ggaaggtccagcacagtgcacttgacgtgtgggaaggcctcgacgatggtcctcgccgtc 60547 Query: 474 gtaccatcgccaccgcagcagtcagtcagggactcgagcccct 516 | || ||||| |||| |||||| ||||| ||||| ||||||| Sbjct: 60546 gcgccgtcgccgccgccgcagtctgtcagcgactccagcccct 60504 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 403 cgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacgaggg 462 ||||||||| |||||||||| ||||||||||||||| ||| | ||| |||||| || Sbjct: 16559 cgatcacctgaggaaggtccagcacggtgcacttgattcccgggaatgccctgacgatgg 16618 Query: 463 ccctcgccgtcgtaccatcgccaccgcagcagtc 496 ||||||||| || || ||||| |||| |||||| Sbjct: 16619 ccctcgccgccgcgccgtcgcctccgccgcagtc 16652
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 ||||| |||||||||| | ||| ||||||||||||| |||||| || |||||||||||| Sbjct: 11494095 agcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagttaacg 11494154 Query: 381 acaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtgcacttgatg 440 |||||||| || || || |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 11494155 acaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcacttgaca 11494214 Query: 441 tgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcagcagtcagtc 500 || || || |||||| ||| ||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 11494215 tgagggtaggccttggcgatggccctcgccgtcgtgccgtcgccgccgcagcagtcggtc 11494274 Query: 501 ag 502 || Sbjct: 11494275 ag 11494276 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 141 accatcatgagcatatccatcaggagttgggcttcaaacattattggccctaaggatggt 200 |||| ||| ||||||||||||| || |||||||||||||||| ||| |||| || ||| Sbjct: 11490748 accaacatcagcatatccatcatcagctgggcttcaaacattactggtcctagtgaaggt 11490807 Query: 201 ccaatcacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttc 260 |||| || || |||||||| || | ||| |||||||| || | | ||||||||||| Sbjct: 11490808 ccaaccagtatctctatgatgatgaccttccctccctcctctcgtgatggaatggccttt 11490867 Query: 261 ttgcactgggttaagattttcacgcaatcctcatcgctcca 301 ||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 11490868 ctgcactgagtcaagatcttcacgcaatcatcatcgctcca 11490908 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgt 472 |||||||||| ||| ||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 11549887 ggaaggtccagcaccgtgcacttgatgtgcgggtacgccttgacgatggccctcgccgt 11549945 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 399 ttgtcgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacg 458 ||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||| | || Sbjct: 7138292 ttgtcgatcaccttcgggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcg 7138351 Query: 459 agggccctcgccgtcg 474 | |||||||||||||| Sbjct: 7138352 atggccctcgccgtcg 7138367 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 |||||||| ||||||| || ||||| || | |||||| |||||||||||||||||| || Sbjct: 11330877 agcatgacagcttgagcaggtgggatggcgcggaacatgtcacccgctacatagttcacc 11330936 Query: 381 acaccatc 388 |||||||| Sbjct: 11330937 acaccatc 11330944 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||||||||| ||| |||||||||| ||| || | |||| ||||| || |||||||||| Sbjct: 11438931 ggaaggtccagcacagtgcacttgacgtgtgggaaggcctcgacgatggtcctcgccgtc 11438990 Query: 474 gtaccatcgccaccgcagcagtcagtcagggactcgagcccct 516 | || ||||| |||| |||||| ||||| ||||| ||||||| Sbjct: 11438991 gcgccgtcgccgccgccgcagtctgtcagcgactccagcccct 11439033 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 18 tatgggtagacctcgataacgcatcgagctcccagtttcctcacaattttatagtctttg 77 |||||||||||||| | |||| |||||||||||||||| ||||||| || ||||| || Sbjct: 11353886 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 11353945 Query: 78 aaccctgctt 87 || ||||||| Sbjct: 11353946 aagcctgctt 11353955 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 41 tcgagctcccagtttcctcacaattttatagtctttgaaccctgcttccatgaatagctt 100 |||||| || |||||| ||||||| |||||||| |||| |||||| |||||| || | Sbjct: 11549334 tcgagcaccaagtttcttcacaatcttatagtcactgaatcctgctgtcatgaacaggtc 11549393 Query: 101 gcgccagtcattttcactccgttggacccctcttgttgtcaccatcatgagcatatccat 160 |||| |||||||| ||||||| ||||| || |||||||||||||||| ||||| Sbjct: 11549394 atgccaatcattttcgttccgttgacgacctctagtattcaccatcatgagcatgtccat 11549453 Query: 161 caggagttgggcttcaaacattattggccctaaggatggt 200 || ||| || ||||| ||||||| ||||| || |||||| Sbjct: 11549454 catgagctgcgcttcgaacattacaggccccaaagatggt 11549493 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 252 atggccttcttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagc 311 ||||| ||||||||||||| | ||| |||||||| || |||||||||||||| || || Sbjct: 7137760 atggctttcttgcactgggacaggatcttcacgcagtcgtcatcgctccaaaaatgcagt 7137819 Query: 312 acaagct 318 ||||||| Sbjct: 7137820 acaagct 7137826 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 403 cgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacgaggg 462 ||||||||| |||||||||| ||||||||||||||| ||| | ||| |||||| || Sbjct: 11482978 cgatcacctgaggaaggtccagcacggtgcacttgattcccgggaatgccctgacgatgg 11482919 Query: 463 ccctcgccgtcgtaccatcgccaccgcagcagtc 496 ||||||||| || || ||||| |||| |||||| Sbjct: 11482918 ccctcgccgccgcgccgtcgcctccgccgcagtc 11482885 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 431 gcacttgatgtgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgca 490 |||||||| |||||| | |||| | ||| ||||||||||| ||| || ||||| |||| Sbjct: 11302391 gcacttgacgtgcgggaaggcctcggcgatggccctcgccgccgtgccgtcgccgccgcc 11302450 Query: 491 gcagtcagtcagggactcga 510 |||||| ||||| ||||||| Sbjct: 11302451 gcagtcggtcagcgactcga 11302470 Score = 44.1 bits (22), Expect = 0.46 Identities = 76/94 (80%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||| ||||| ||||||||||||||| || || | |||| ||||| |||| |||||| Sbjct: 11330970 ggaaagtccagcacggtgcacttgatatgtgggaacgcctcgacgatggccttcgccgct 11331029 Query: 474 gtaccatcgccaccgcagcagtcagtcagggact 507 | |||||||| |||| |||||| ||||| |||| Sbjct: 11331030 gcgccatcgccgccgcggcagtcggtcagcgact 11331063 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggtccaacacggtgcacttgatgt 441 ||||||| ||||||||||||||||| Sbjct: 19030482 aggtccatcacggtgcacttgatgt 19030506
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 ||||| |||||||||| | ||| ||||||||||||| |||||| || |||||||||||| Sbjct: 11573284 agcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagttaacg 11573343 Query: 381 acaccatcctttggggctttgtcgatcaccttcggaaggtccaacacggtgcacttgatg 440 |||||||| || || || |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 11573344 acaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcacttgaca 11573403 Query: 441 tgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgcagcagtcagtc 500 || || || |||||| ||| ||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 11573404 tgagggtaggccttggcgatggccctcgccgtcgtgccgtcgccgccgcagcagtcggtc 11573463 Query: 501 ag 502 || Sbjct: 11573464 ag 11573465 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 141 accatcatgagcatatccatcaggagttgggcttcaaacattattggccctaaggatggt 200 |||| ||| ||||||||||||| || |||||||||||||||| ||| |||| || ||| Sbjct: 11569937 accaacatcagcatatccatcatcagctgggcttcaaacattactggtcctagtgaaggt 11569996 Query: 201 ccaatcacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttc 260 |||| || || |||||||| || | ||| |||||||| || | | ||||||||||| Sbjct: 11569997 ccaaccagtatctctatgatgatgaccttccctccctcctctcgtgatggaatggccttt 11570056 Query: 261 ttgcactgggttaagattttcacgcaatcctcatcgctcca 301 ||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 11570057 ctgcactgagtcaagatcttcacgcaatcatcatcgctcca 11570097 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgt 472 |||||||||| ||| ||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 11629076 ggaaggtccagcaccgtgcacttgatgtgcgggtacgccttgacgatggccctcgccgt 11629134 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 399 ttgtcgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacg 458 ||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||| | || Sbjct: 7204263 ttgtcgatcaccttcgggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcg 7204322 Query: 459 agggccctcgccgtcg 474 | |||||||||||||| Sbjct: 7204323 atggccctcgccgtcg 7204338 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 |||||||| ||||||| || ||||| || | |||||| |||||||||||||||||| || Sbjct: 11410066 agcatgacagcttgagcaggtgggatggcgcggaacatgtcacccgctacatagttcacc 11410125 Query: 381 acaccatc 388 |||||||| Sbjct: 11410126 acaccatc 11410133 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||||||||| ||| |||||||||| ||| || | |||| ||||| || |||||||||| Sbjct: 11518120 ggaaggtccagcacagtgcacttgacgtgtgggaaggcctcgacgatggtcctcgccgtc 11518179 Query: 474 gtaccatcgccaccgcagcagtcagtcagggactcgagcccct 516 | || ||||| |||| |||||| ||||| ||||| ||||||| Sbjct: 11518180 gcgccgtcgccgccgccgcagtctgtcagcgactccagcccct 11518222 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 18 tatgggtagacctcgataacgcatcgagctcccagtttcctcacaattttatagtctttg 77 |||||||||||||| | |||| |||||||||||||||| ||||||| || ||||| || Sbjct: 11433075 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 11433134 Query: 78 aaccctgctt 87 || ||||||| Sbjct: 11433135 aagcctgctt 11433144 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 41 tcgagctcccagtttcctcacaattttatagtctttgaaccctgcttccatgaatagctt 100 |||||| || |||||| ||||||| |||||||| |||| |||||| |||||| || | Sbjct: 11628523 tcgagcaccaagtttcttcacaatcttatagtcactgaatcctgctgtcatgaacaggtc 11628582 Query: 101 gcgccagtcattttcactccgttggacccctcttgttgtcaccatcatgagcatatccat 160 |||| |||||||| ||||||| ||||| || |||||||||||||||| ||||| Sbjct: 11628583 atgccaatcattttcgttccgttgacgacctctagtattcaccatcatgagcatgtccat 11628642 Query: 161 caggagttgggcttcaaacattattggccctaaggatggt 200 || ||| || ||||| ||||||| ||||| || |||||| Sbjct: 11628643 catgagctgcgcttcgaacattacaggccccaaagatggt 11628682 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 252 atggccttcttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagc 311 ||||| ||||||||||||| | ||| |||||||| || |||||||||||||| || || Sbjct: 7203731 atggctttcttgcactgggacaggatcttcacgcagtcgtcatcgctccaaaaatgcagt 7203790 Query: 312 acaagct 318 ||||||| Sbjct: 7203791 acaagct 7203797 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 403 cgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacgaggg 462 ||||||||| |||||||||| ||||||||||||||| ||| | ||| |||||| || Sbjct: 11562167 cgatcacctgaggaaggtccagcacggtgcacttgattcccgggaatgccctgacgatgg 11562108 Query: 463 ccctcgccgtcgtaccatcgccaccgcagcagtc 496 ||||||||| || || ||||| |||| |||||| Sbjct: 11562107 ccctcgccgccgcgccgtcgcctccgccgcagtc 11562074 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 431 gcacttgatgtgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgca 490 |||||||| |||||| | |||| | ||| ||||||||||| ||| || ||||| |||| Sbjct: 11381580 gcacttgacgtgcgggaaggcctcggcgatggccctcgccgccgtgccgtcgccgccgcc 11381639 Query: 491 gcagtcagtcagggactcga 510 |||||| ||||| ||||||| Sbjct: 11381640 gcagtcggtcagcgactcga 11381659 Score = 44.1 bits (22), Expect = 0.46 Identities = 76/94 (80%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||| ||||| ||||||||||||||| || || | |||| ||||| |||| |||||| Sbjct: 11410159 ggaaagtccagcacggtgcacttgatatgtgggaacgcctcgacgatggccttcgccgct 11410218 Query: 474 gtaccatcgccaccgcagcagtcagtcagggact 507 | |||||||| |||| |||||| ||||| |||| Sbjct: 11410219 gcgccatcgccgccgcggcagtcggtcagcgact 11410252 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggtccaacacggtgcacttgatgt 441 ||||||| ||||||||||||||||| Sbjct: 19189131 aggtccatcacggtgcacttgatgt 19189155
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 89.7 bits (45), Expect = 9e-15 Identities = 96/113 (84%) Strand = Plus / Minus Query: 276 attttcacgcaatcctcatcgctccaaaagtgtagcacaagcttaagcatgacggcttga 335 |||||||| |||||||| || ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 915 attttcacacaatcctcgtcactccagtggtgaagcacaagcttgagcatgacagcttga 856 Query: 336 gaagatgggacggtgtggaacaggtcacccgctacatagttaacgacaccatc 388 | || ||||| || | |||||| |||||||||||||||||| || |||||||| Sbjct: 855 gcaggtgggatggcgcggaacatgtcacccgctacatagttcaccacaccatc 803 Score = 44.1 bits (22), Expect = 0.46 Identities = 76/94 (80%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||| ||||| ||||||||||||||| || || | |||| ||||| |||| |||||| Sbjct: 777 ggaaagtccagcacggtgcacttgatatgtgggaacgcctcgacgatggccttcgccgct 718 Query: 474 gtaccatcgccaccgcagcagtcagtcagggact 507 | |||||||| |||| |||||| ||||| |||| Sbjct: 717 gcgccatcgccgccgcggcagtcggtcagcgact 684
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 399 ttgtcgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacg 458 ||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||| | || Sbjct: 44263 ttgtcgatcaccttcgggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcg 44204 Query: 459 agggccctcgccgtcg 474 | |||||||||||||| Sbjct: 44203 atggccctcgccgtcg 44188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 252 atggccttcttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagc 311 ||||| ||||||||||||| | ||| |||||||| || |||||||||||||| || || Sbjct: 44795 atggctttcttgcactgggacaggatcttcacgcagtcgtcatcgctccaaaaatgcagt 44736 Query: 312 acaagct 318 ||||||| Sbjct: 44735 acaagct 44729
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 399 ttgtcgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacg 458 ||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||| | || Sbjct: 51512 ttgtcgatcaccttcgggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcg 51571 Query: 459 agggccctcgccgtcg 474 | |||||||||||||| Sbjct: 51572 atggccctcgccgtcg 51587 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 252 atggccttcttgcactgggttaagattttcacgcaatcctcatcgctccaaaagtgtagc 311 ||||| ||||||||||||| | ||| |||||||| || |||||||||||||| || || Sbjct: 50980 atggctttcttgcactgggacaggatcttcacgcagtcgtcatcgctccaaaaatgcagt 51039 Query: 312 acaagct 318 ||||||| Sbjct: 51040 acaagct 51046
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 321 agcatgacggcttgagaagatgggacggtgtggaacaggtcacccgctacatagttaacg 380 |||||||| ||||||| || ||||| || | |||||| |||||||||||||||||| || Sbjct: 117235 agcatgacagcttgagcaggtgggatggcgcggaacatgtcacccgctacatagttcacc 117294 Query: 381 acaccatc 388 |||||||| Sbjct: 117295 acaccatc 117302 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 18 tatgggtagacctcgataacgcatcgagctcccagtttcctcacaattttatagtctttg 77 |||||||||||||| | |||| |||||||||||||||| ||||||| || ||||| || Sbjct: 140244 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 140303 Query: 78 aaccctgctt 87 || ||||||| Sbjct: 140304 aagcctgctt 140313 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 431 gcacttgatgtgcggataagccttgacgagggccctcgccgtcgtaccatcgccaccgca 490 |||||||| |||||| | |||| | ||| ||||||||||| ||| || ||||| |||| Sbjct: 88749 gcacttgacgtgcgggaaggcctcggcgatggccctcgccgccgtgccgtcgccgccgcc 88808 Query: 491 gcagtcagtcagggactcga 510 |||||| ||||| ||||||| Sbjct: 88809 gcagtcggtcagcgactcga 88828 Score = 44.1 bits (22), Expect = 0.46 Identities = 76/94 (80%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcggataagccttgacgagggccctcgccgtc 473 |||| ||||| ||||||||||||||| || || | |||| ||||| |||| |||||| Sbjct: 117328 ggaaagtccagcacggtgcacttgatatgtgggaacgcctcgacgatggccttcgccgct 117387 Query: 474 gtaccatcgccaccgcagcagtcagtcagggact 507 | |||||||| |||| |||||| ||||| |||| Sbjct: 117388 gcgccatcgccgccgcggcagtcggtcagcgact 117421
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 60.0 bits (30), Expect = 8e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 23 gtagacctcgataacgcatcgagctcccagtttcctcacaattttatagtctttgaaccc 82 ||||||||||||||| | ||| || ||||||||| | |||||||| ||||| | ||||| Sbjct: 1133 gtagacctcgataacacctcgtgcacccagtttcttgacaattttgtagtcgctaaaccc 1074 Query: 83 tgcttccatgaatagcttgcgccagtcattttcactccgttg 124 ||||| | |||| |||| |||||| ||||||||| ||||| Sbjct: 1073 tgctttcgtgaagagctcatgccagttattttcacttcgttg 1032 Score = 40.1 bits (20), Expect = 7.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 206 cacaatgtctatgataattatctttcctccctcgtcgtgcggaggaatggccttcttgca 265 |||||||||||| | ||| | |||||||||||| ||| | | ||||||||| | ||| || Sbjct: 950 cacaatgtctattacaatcacctttcctccctcctcgcgtgaaggaatggcatccttaca 891 Query: 266 ctgggtta 273 ||||||| Sbjct: 890 ttgggtta 883
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 403 cgatcaccttcggaaggtccaacacggtgcacttgatgtgcggataagccttgacgaggg 462 ||||||||| |||||||||| ||||||||||||||| ||| | ||| |||||| || Sbjct: 805 cgatcacctgaggaaggtccagcacggtgcacttgattcccgggaatgccctgacgatgg 746 Query: 463 ccctcgccgtcgtaccatcgccaccgcagcagtc 496 ||||||||| || || ||||| |||| |||||| Sbjct: 745 ccctcgccgccgcgccgtcgcctccgccgcagtc 712
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||||||||||||||| ||||| Sbjct: 674 ggaaggtccagcacggtgcacttgatatgcgg 643
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||||||||||||||| ||||| Sbjct: 16264584 ggaaggtccagcacggtgcacttgatatgcgg 16264615 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||||||||||||||| ||||| Sbjct: 16220133 ggaaggtccagcacggtgcacttgatatgcgg 16220102 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||| ||||||||||| ||||| Sbjct: 16295257 ggaaggtccagcaccgtgcacttgatatgcgg 16295288
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||||||||||||||| ||||| Sbjct: 85022 ggaaggtccagcacggtgcacttgatatgcgg 85053 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||||||||||||||| ||||| Sbjct: 40571 ggaaggtccagcacggtgcacttgatatgcgg 40540 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||| ||||||||||| ||||| Sbjct: 115695 ggaaggtccagcaccgtgcacttgatatgcgg 115726
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 273 aagattttcacgcaatcctcatcgctccaa 302 |||||| | ||||||||||||||||||||| Sbjct: 22270868 aagattcttacgcaatcctcatcgctccaa 22270897
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 273 aagattttcacgcaatcctcatcgctccaa 302 |||||| | ||||||||||||||||||||| Sbjct: 87244 aagattcttacgcaatcctcatcgctccaa 87273
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 139 tcaccatcatgagcatatccatcaggagttgggc 172 |||||||||||||||| |||||||| || ||||| Sbjct: 987 tcaccatcatgagcatgtccatcagcagctgggc 954
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggtccaacacggtgcacttgatgt 441 ||||||| ||||||||||||||||| Sbjct: 133680 aggtccatcacggtgcacttgatgt 133704
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggtccaacacggtgcacttgatgt 441 ||||||| ||||||||||||||||| Sbjct: 33300 aggtccatcacggtgcacttgatgt 33324
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 actcgagccccttgaagatgt 525 ||||||||||||||||||||| Sbjct: 140471 actcgagccccttgaagatgt 140491
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 acaattttatagtctttgaaccctg 84 ||||||||||||||| ||||||||| Sbjct: 60813 acaattttatagtctatgaaccctg 60789
>emb|AL160412.14| Human DNA sequence from clone RP5-827E24 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 111824 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 134 tgttgtcaccatcatgagcatatccatca 162 ||||||||||||||||| |||| |||||| Sbjct: 72432 tgttgtcaccatcatgaccataaccatca 72460
>ref|XM_478005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||| ||||||||||| ||||| Sbjct: 644 ggaaggtccagcaccgtgcacttgatatgcgg 613
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ttccatgaatagcttgcgccagtc 109 ||||||||| |||||||||||||| Sbjct: 298040 ttccatgaagagcttgcgccagtc 298063
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 atgtctatgataattatctt 229 |||||||||||||||||||| Sbjct: 157954 atgtctatgataattatctt 157935
>emb|AL136371.8| Human DNA sequence from clone RP11-110P20 on chromosome 1q31.1 Contains STSs, GSSs and a CpG island, complete sequence Length = 147784 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 agtcagtcagggactcgagc 512 |||||||||||||||||||| Sbjct: 47700 agtcagtcagggactcgagc 47681
>gb|AC008639.8| Homo sapiens chromosome 5 clone CTB-179J16, complete sequence Length = 108337 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cttgcactgggttaagattttcac 283 ||||||||||| |||||||||||| Sbjct: 27834 cttgcactgggctaagattttcac 27857
>gb|AC010854.3|AC010854 Homo sapiens chromosome 18, clone RP11-349N23, complete sequence Length = 169682 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cttgcactgggttaagattttcac 283 ||||||||||| |||||||||||| Sbjct: 105137 cttgcactgggctaagattttcac 105160
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 414 ggaaggtccaacacggtgcacttgatgtgcgg 445 |||||||||| ||| ||||||||||| ||||| Sbjct: 1313 ggaaggtccagcaccgtgcacttgatatgcgg 1344
>emb|AL591208.24| Mouse DNA sequence from clone RP23-149I2 on chromosome 12, complete sequence Length = 199854 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atgtctatgataattatctt 229 |||||||||||||||||||| Sbjct: 147630 atgtctatgataattatctt 147649 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,590,190 Number of Sequences: 3902068 Number of extensions: 3590190 Number of successful extensions: 56434 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56101 Number of HSP's gapped (non-prelim): 316 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
