ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17n10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 101 bits (51), Expect = 3e-18 Identities = 312/399 (78%) Strand = Plus / Plus Query: 248 ccataacgaggatatcattgcttgtatacctctcggtcacatccacctggtcaggtgaca 307 ||||||| |||||||| |||||||| |||| |||||| || ||||||| |||| |||| Sbjct: 5183542 ccataacaaggatatcgttgcttgtgtaccgctcggtgacgtccacctcctcagccgaca 5183601 Query: 308 tgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggcacga 367 |||| | ||| || |||||| || ||||||| || || || || | || ||||||| Sbjct: 5183602 tgcctttgggcaggtgccactcgaacgcatgcagcaatgacgcgactgtaaatggcacga 5183661 Query: 368 cgagctccaccatgggcaatgcagggcacagcctccggccggtgcccagcgggatgaact 427 ||||||| ||||| ||||| |||||||||||||| ||||| | || ||||| || |||| Sbjct: 5183662 cgagctctaccattggcaaagcagggcacagccttcggccagacccaagcggaataaact 5183721 Query: 428 tgacgtccttcccccacatgccatgctctgtcttccccaaaaaccgctctggcacaaatt 487 || | | ||||||||||| | | |||| ||||| ||||| || || || |||| || | Sbjct: 5183722 tggcctgcttcccccacaagtccagctccgtcttgcccaagaaacggtccggcaagaagt 5183781 Query: 488 catcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatgg 547 | || || ||||||||||| || ||| ||||| || | ||| ||||||||||| | | Sbjct: 5183782 cgtccggtctctcccatgcggtagagtcacgcattatcgcccatgagttgaagatcaccg 5183841 Query: 548 tggcgcccataggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcg 607 | | |||| | | |||| | |||||||| ||| |||||| ||||| || |||| ||||| Sbjct: 5183842 tcgtgcccttggacacggcgtagccgccgatcctcacgccgtcctcgaccaccaggtgcg 5183901 Query: 608 gcagcagtagcggtgccacggggtgtagccgcatcgact 646 ||| ||| || |||||||| ||||| ||||||||||||| Sbjct: 5183902 gcaacaggaggggtgccacagggtgcagccgcatcgact 5183940
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 101 bits (51), Expect = 3e-18 Identities = 312/399 (78%) Strand = Plus / Plus Query: 248 ccataacgaggatatcattgcttgtatacctctcggtcacatccacctggtcaggtgaca 307 ||||||| |||||||| |||||||| |||| |||||| || ||||||| |||| |||| Sbjct: 5183524 ccataacaaggatatcgttgcttgtgtaccgctcggtgacgtccacctcctcagccgaca 5183583 Query: 308 tgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggcacga 367 |||| | ||| || |||||| || ||||||| || || || || | || ||||||| Sbjct: 5183584 tgcctttgggcaggtgccactcgaacgcatgcagcaatgacgcgactgtaaatggcacga 5183643 Query: 368 cgagctccaccatgggcaatgcagggcacagcctccggccggtgcccagcgggatgaact 427 ||||||| ||||| ||||| |||||||||||||| ||||| | || ||||| || |||| Sbjct: 5183644 cgagctctaccattggcaaagcagggcacagccttcggccagacccaagcggaataaact 5183703 Query: 428 tgacgtccttcccccacatgccatgctctgtcttccccaaaaaccgctctggcacaaatt 487 || | | ||||||||||| | | |||| ||||| ||||| || || || |||| || | Sbjct: 5183704 tggcctgcttcccccacaagtccagctccgtcttgcccaagaaacggtccggcaagaagt 5183763 Query: 488 catcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatgg 547 | || || ||||||||||| || ||| ||||| || | ||| ||||||||||| | | Sbjct: 5183764 cgtccggtctctcccatgcggtagagtcacgcattatcgcccatgagttgaagatcaccg 5183823 Query: 548 tggcgcccataggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcg 607 | | |||| | | |||| | |||||||| ||| |||||| ||||| || |||| ||||| Sbjct: 5183824 tcgtgcccttggacacggcgtagccgccgatcctcacgccgtcctcgaccaccaggtgcg 5183883 Query: 608 gcagcagtagcggtgccacggggtgtagccgcatcgact 646 ||| ||| || |||||||| ||||| ||||||||||||| Sbjct: 5183884 gcaacaggaggggtgccacagggtgcagccgcatcgact 5183922
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 101 bits (51), Expect = 3e-18 Identities = 312/399 (78%) Strand = Plus / Minus Query: 248 ccataacgaggatatcattgcttgtatacctctcggtcacatccacctggtcaggtgaca 307 ||||||| |||||||| |||||||| |||| |||||| || ||||||| |||| |||| Sbjct: 80057 ccataacaaggatatcgttgcttgtgtaccgctcggtgacgtccacctcctcagccgaca 79998 Query: 308 tgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggcacga 367 |||| | ||| || |||||| || ||||||| || || || || | || ||||||| Sbjct: 79997 tgcctttgggcaggtgccactcgaacgcatgcagcaatgacgcgactgtaaatggcacga 79938 Query: 368 cgagctccaccatgggcaatgcagggcacagcctccggccggtgcccagcgggatgaact 427 ||||||| ||||| ||||| |||||||||||||| ||||| | || ||||| || |||| Sbjct: 79937 cgagctctaccattggcaaagcagggcacagccttcggccagacccaagcggaataaact 79878 Query: 428 tgacgtccttcccccacatgccatgctctgtcttccccaaaaaccgctctggcacaaatt 487 || | | ||||||||||| | | |||| ||||| ||||| || || || |||| || | Sbjct: 79877 tggcctgcttcccccacaagtccagctccgtcttgcccaagaaacggtccggcaagaagt 79818 Query: 488 catcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatgg 547 | || || ||||||||||| || ||| ||||| || | ||| ||||||||||| | | Sbjct: 79817 cgtccggtctctcccatgcggtagagtcacgcattatcgcccatgagttgaagatcaccg 79758 Query: 548 tggcgcccataggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcg 607 | | |||| | | |||| | |||||||| ||| |||||| ||||| || |||| ||||| Sbjct: 79757 tcgtgcccttggacacggcgtagccgccgatcctcacgccgtcctcgaccaccaggtgcg 79698 Query: 608 gcagcagtagcggtgccacggggtgtagccgcatcgact 646 ||| ||| || |||||||| ||||| ||||||||||||| Sbjct: 79697 gcaacaggaggggtgccacagggtgcagccgcatcgact 79659
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 1e-08 Identities = 122/151 (80%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | |||||||||||||| | | Sbjct: 23250115 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcc 23250056 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 23250055 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 23249996 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| ||| | | |||||||||||| |||| Sbjct: 23249995 tcctccacggcgaagtgcggcagcagcagcg 23249965 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || ||||||| ||||||||| | |||||||||||||| | | Sbjct: 17520036 aaccgctccggcacgaactcgtcgggccgctcccatgccgccgggtcgcgcatgatcgcc 17520095 Query: 529 cacgagttgaagat 542 |||| ||||||||| Sbjct: 17520096 cacgtgttgaagat 17520109
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 69.9 bits (35), Expect = 1e-08 Identities = 122/151 (80%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | |||||||||||||| | | Sbjct: 84877 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcc 84818 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 84817 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 84758 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| ||| | | |||||||||||| |||| Sbjct: 84757 tcctccacggcgaagtgcggcagcagcagcg 84727
>ref|XM_466323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1669 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 1275 cgctccggcacgaactcgtcgggcctctcccacgccgcggggtcgcgcatgatcgcccac 1216 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | ||||||||| | |||||||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 1215 gcgttgaagatcaccatggcgcccctgggcaccgcgtagccgccgatctccacgccgtcc 1156 Query: 592 tc 593 || Sbjct: 1155 tc 1154
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 21683275 cgctccggcacgaactcgtcgggcctctcccacgccgcggggtcgcgcatgatcgcccac 21683216 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | ||||||||| | |||||||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 21683215 gcgttgaagatcaccatggcgcccctgggcaccgcgtagccgccgatctccacgccgtcc 21683156 Query: 592 tc 593 || Sbjct: 21683155 tc 21683154 Score = 63.9 bits (32), Expect = 6e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 21760979 cgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcccac 21760920 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | |||||||| | |||| |||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 21760919 gcgttgaagagcaccgtggagcccctcggcaccgcgtagccgccgatctccacgccgtcc 21760860 Query: 592 tctacgaccatgtgcggcagcagtagcg 619 || || | | |||||||||||| |||| Sbjct: 21760859 tccgcggcgaagtgcggcagcagcagcg 21760832 Score = 54.0 bits (27), Expect = 6e-04 Identities = 120/151 (79%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | | |||||||||||| | | Sbjct: 21711119 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgcgtcgcgcatgatcgcc 21711060 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 21711059 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 21711000 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| | | | | |||||||||||| |||| Sbjct: 21710999 tcctccatggcgaagtgcggcagcagcagcg 21710969 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Plus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtg 549 ||||| |||||||| || | |||||||||||||| | ||||| ||||||||| | ||| Sbjct: 21924337 tcggggctctcccacgccgccgggtcgcgcatgatcgcccacgcgttgaagatcaccgtg 21924396 Query: 550 gcgcccataggcacgtcatagccgcctatctccacgccctcct 592 | |||| | |||||| | ||||| || ||||| ||||| |||| Sbjct: 21924397 gtgcccttgggcacggcgtagccaccgatctcgacgccgtcct 21924439
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 64672 cgctccggcacgaactcgtcgggcctctcccacgccgcggggtcgcgcatgatcgcccac 64613 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | ||||||||| | |||||||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 64612 gcgttgaagatcaccatggcgcccctgggcaccgcgtagccgccgatctccacgccgtcc 64553 Query: 592 tc 593 || Sbjct: 64552 tc 64551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 142376 cgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcccac 142317 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | |||||||| | |||| |||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 142316 gcgttgaagagcaccgtggagcccctcggcaccgcgtagccgccgatctccacgccgtcc 142257 Query: 592 tctacgaccatgtgcggcagcagtagcg 619 || || | | |||||||||||| |||| Sbjct: 142256 tccgcggcgaagtgcggcagcagcagcg 142229 Score = 54.0 bits (27), Expect = 6e-04 Identities = 120/151 (79%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | | |||||||||||| | | Sbjct: 92516 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgcgtcgcgcatgatcgcc 92457 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 92456 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 92397 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| | | | | |||||||||||| |||| Sbjct: 92396 tcctccatggcgaagtgcggcagcagcagcg 92366
>dbj|AK059010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H10, full insert sequence Length = 1669 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 1275 cgctccggcacgaactcgtcgggcctctcccacgccgcggggtcgcgcatgatcgcccac 1216 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | ||||||||| | |||||||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 1215 gcgttgaagatcaccatggcgcccctgggcaccgcgtagccgccgatctccacgccgtcc 1156 Query: 592 tc 593 || Sbjct: 1155 tc 1154
>ref|XM_466336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1657 Score = 63.9 bits (32), Expect = 6e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 1283 cgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcccac 1224 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | |||||||| | |||| |||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 1223 gcgttgaagagcaccgtggagcccctcggcaccgcgtagccgccgatctccacgccgtcc 1164 Query: 592 tctacgaccatgtgcggcagcagtagcg 619 || || | | |||||||||||| |||| Sbjct: 1163 tccgcggcgaagtgcggcagcagcagcg 1136
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 63.9 bits (32), Expect = 6e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 53378 cgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcccac 53319 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | |||||||| | |||| |||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 53318 gcgttgaagagcaccgtggagcccctcggcaccgcgtagccgccgatctccacgccgtcc 53259 Query: 592 tctacgaccatgtgcggcagcagtagcg 619 || || | | |||||||||||| |||| Sbjct: 53258 tccgcggcgaagtgcggcagcagcagcg 53231 Score = 54.0 bits (27), Expect = 6e-04 Identities = 120/151 (79%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | | |||||||||||| | | Sbjct: 3518 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgcgtcgcgcatgatcgcc 3459 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 3458 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 3399 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| | | | | |||||||||||| |||| Sbjct: 3398 tcctccatggcgaagtgcggcagcagcagcg 3368
>dbj|AK105913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H06, full insert sequence Length = 1657 Score = 63.9 bits (32), Expect = 6e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 472 cgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggaccac 531 ||||| ||||| || || |||||||||||||| || | |||||||||||||| | |||| Sbjct: 1283 cgctccggcacgaactcgtcgggcctctcccacgccgccgggtcgcgcatgatcgcccac 1224 Query: 532 gagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccctcc 591 | |||||||| | |||| |||| | ||||| | |||||||| ||||||||||| ||| Sbjct: 1223 gcgttgaagagcaccgtggagcccctcggcaccgcgtagccgccgatctccacgccgtcc 1164 Query: 592 tctacgaccatgtgcggcagcagtagcg 619 || || | | |||||||||||| |||| Sbjct: 1163 tccgcggcgaagtgcggcagcagcagcg 1136
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || ||||||| ||||||||| | |||||||||||||| | | Sbjct: 151077 aaccgctccggcacgaactcgtcgggccgctcccatgccgccgggtcgcgcatgatcgcc 151136 Query: 529 cacgagttgaagat 542 |||| ||||||||| Sbjct: 151137 cacgtgttgaagat 151150
>dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075M17 Length = 91422 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || ||||||| ||||||||| | |||||||||||||| | | Sbjct: 24482 aaccgctccggcacgaactcgtcgggccgctcccatgccgccgggtcgcgcatgatcgcc 24541 Query: 529 cacgagttgaagat 542 |||| ||||||||| Sbjct: 24542 cacgtgttgaagat 24555
>dbj|AK106229.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A12, full insert sequence Length = 1679 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || ||||||| ||||||||| | |||||||||||||| | | Sbjct: 1309 aaccgctccggcacgaactcgtcgggccgctcccatgccgccgggtcgcgcatgatcgcc 1250 Query: 529 cacgagttgaagat 542 |||| ||||||||| Sbjct: 1249 cacgtgttgaagat 1236
>ref|XM_483266.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 559 ggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcggcagcagtagc 618 |||||| | |||||||| ||||||||||| ||||| | || ||||||||| |||| | Sbjct: 1174 ggcacggcgtagccgccgatctccacgccgtcctccgccgcctggtgcggcagtagtatc 1115 Query: 619 ggtgccacggggtgtagccgcat 641 |||||||| ||||| |||||||| Sbjct: 1114 ggtgccaccgggtgaagccgcat 1092 Score = 40.1 bits (20), Expect = 8.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 304 gacatgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggc 363 |||||||| | ||| ||||||||||| || || |||| || || |||| ||||| ||| Sbjct: 1429 gacatgccgtcggggagcctccactcgaacgcgtgcagcagcgacgccagtatgaatggc 1370 Query: 364 acgacgagctccaccatgggcaatgcagggcacagcctcc 403 |||||| |||| |||| ||||| | ||||||||||||| Sbjct: 1369 acgacgcgctctgccatcggcaaccccgggcacagcctcc 1330
>ref|XM_466327.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 54.0 bits (27), Expect = 6e-04 Identities = 120/151 (79%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | | |||||||||||| | | Sbjct: 1350 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgcgtcgcgcatgatcgcc 1291 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 1290 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 1231 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| | | | | |||||||||||| |||| Sbjct: 1230 tcctccatggcgaagtgcggcagcagcagcg 1200
>gb|AF488522.1| Oryza sativa Cyt-P450 monooxygenase (PM-II) mRNA, complete cds Length = 1721 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 559 ggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcggcagcagtagc 618 |||||| | |||||||| ||||||||||| ||||| | || ||||||||| |||| | Sbjct: 1154 ggcacggcgtagccgccgatctccacgccgtcctccgccgcctggtgcggcagtagtatc 1095 Query: 619 ggtgccacggggtgtagccgcat 641 |||||||| ||||| |||||||| Sbjct: 1094 ggtgccaccgggtgaagccgcat 1072 Score = 40.1 bits (20), Expect = 8.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 304 gacatgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggc 363 |||||||| | ||| ||||||||||| || || |||| || || |||| ||||| ||| Sbjct: 1409 gacatgccgtcggggagcctccactcgaacgcgtgcagcagcgacgccagtatgaatggc 1350 Query: 364 acgacgagctccaccatgggcaatgcagggcacagcctcc 403 |||||| |||| |||| ||||| | ||||||||||||| Sbjct: 1349 acgacgcgctctgccatcggcaaccccgggcacagcctcc 1310
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 559 ggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcggcagcagtagc 618 |||||| | |||||||| ||||||||||| ||||| | || ||||||||| |||| | Sbjct: 25149088 ggcacggcgtagccgccgatctccacgccgtcctccgccgcctggtgcggcagtagtatc 25149029 Query: 619 ggtgccacggggtgtagccgcat 641 |||||||| ||||| |||||||| Sbjct: 25149028 ggtgccaccgggtgaagccgcat 25149006 Score = 42.1 bits (21), Expect = 2.2 Identities = 81/101 (80%) Strand = Plus / Plus Query: 493 ggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtggcg 552 ||||||||||| ||| ||||||| |||||||| | |||| ||||| || | || | | Sbjct: 25102819 ggcctctcccacgctgcagggtctcgcatgatagtccacacattgaatatcacagtcgag 25102878 Query: 553 cccataggcacgtcatagccgcctatctccacgccctcctc 593 ||| | |||||| | |||||||| ||||||||||| ||||| Sbjct: 25102879 cccttcggcacggcgtagccgccgatctccacgccgtcctc 25102919 Score = 40.1 bits (20), Expect = 8.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 304 gacatgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggc 363 |||||||| | ||| ||||||||||| || || |||| || || |||| ||||| ||| Sbjct: 25149343 gacatgccgtcggggagcctccactcgaacgcgtgcagcagcgacgccagtatgaatggc 25149284 Query: 364 acgacgagctccaccatgggcaatgcagggcacagcctcc 403 |||||| |||| |||| ||||| | ||||||||||||| Sbjct: 25149283 acgacgcgctctgccatcggcaaccccgggcacagcctcc 25149244
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 559 ggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcggcagcagtagc 618 |||||| | |||||||| ||||||||||| ||||| | || ||||||||| |||| | Sbjct: 14211 ggcacggcgtagccgccgatctccacgccgtcctccgccgcctggtgcggcagtagtatc 14152 Query: 619 ggtgccacggggtgtagccgcat 641 |||||||| ||||| |||||||| Sbjct: 14151 ggtgccaccgggtgaagccgcat 14129 Score = 40.1 bits (20), Expect = 8.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 304 gacatgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggc 363 |||||||| | ||| ||||||||||| || || |||| || || |||| ||||| ||| Sbjct: 14466 gacatgccgtcggggagcctccactcgaacgcgtgcagcagcgacgccagtatgaatggc 14407 Query: 364 acgacgagctccaccatgggcaatgcagggcacagcctcc 403 |||||| |||| |||| ||||| | ||||||||||||| Sbjct: 14406 acgacgcgctctgccatcggcaaccccgggcacagcctcc 14367
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 559 ggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcggcagcagtagc 618 |||||| | |||||||| ||||||||||| ||||| | || ||||||||| |||| | Sbjct: 53263 ggcacggcgtagccgccgatctccacgccgtcctccgccgcctggtgcggcagtagtatc 53204 Query: 619 ggtgccacggggtgtagccgcat 641 |||||||| ||||| |||||||| Sbjct: 53203 ggtgccaccgggtgaagccgcat 53181 Score = 42.1 bits (21), Expect = 2.2 Identities = 81/101 (80%) Strand = Plus / Plus Query: 493 ggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtggcg 552 ||||||||||| ||| ||||||| |||||||| | |||| ||||| || | || | | Sbjct: 6994 ggcctctcccacgctgcagggtctcgcatgatagtccacacattgaatatcacagtcgag 7053 Query: 553 cccataggcacgtcatagccgcctatctccacgccctcctc 593 ||| | |||||| | |||||||| ||||||||||| ||||| Sbjct: 7054 cccttcggcacggcgtagccgccgatctccacgccgtcctc 7094 Score = 40.1 bits (20), Expect = 8.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 304 gacatgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggc 363 |||||||| | ||| ||||||||||| || || |||| || || |||| ||||| ||| Sbjct: 53518 gacatgccgtcggggagcctccactcgaacgcgtgcagcagcgacgccagtatgaatggc 53459 Query: 364 acgacgagctccaccatgggcaatgcagggcacagcctcc 403 |||||| |||| |||| ||||| | ||||||||||||| Sbjct: 53458 acgacgcgctctgccatcggcaaccccgggcacagcctcc 53419
>dbj|AK102040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081G24, full insert sequence Length = 1694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 559 ggcacgtcatagccgcctatctccacgccctcctctacgaccatgtgcggcagcagtagc 618 |||||| | |||||||| ||||||||||| ||||| | || ||||||||| |||| | Sbjct: 1174 ggcacggcgtagccgccgatctccacgccgtcctccgccgcctggtgcggcagtagtatc 1115 Query: 619 ggtgccacggggtgtagccgcat 641 |||||||| ||||| |||||||| Sbjct: 1114 ggtgccaccgggtgaagccgcat 1092 Score = 40.1 bits (20), Expect = 8.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 304 gacatgccctggggtagcctccactcaaaggcatgcaacatggatgccaccatgaagggc 363 |||||||| | ||| ||||||||||| || || |||| || || |||| ||||| ||| Sbjct: 1429 gacatgccgtcggggagcctccactcgaacgcgtgcagcagcgacgccagtatgaatggc 1370 Query: 364 acgacgagctccaccatgggcaatgcagggcacagcctcc 403 |||||| |||| |||| ||||| | ||||||||||||| Sbjct: 1369 acgacgcgctctgccatcggcaaccccgggcacagcctcc 1330
>dbj|AK069701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027B10, full insert sequence Length = 1737 Score = 54.0 bits (27), Expect = 6e-04 Identities = 120/151 (79%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | | |||||||||||| | | Sbjct: 1350 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgcgtcgcgcatgatcgcc 1291 Query: 529 cacgagttgaagatgatggtggcgcccataggcacgtcatagccgcctatctccacgccc 588 |||| |||||||| | |||| |||| | ||||| | |||||||| | ||||||||| Sbjct: 1290 cacgcgttgaagagcaccgtggagcccttgggcaccgcgtagccgccgacctccacgccg 1231 Query: 589 tcctctacgaccatgtgcggcagcagtagcg 619 ||||| | | | | |||||||||||| |||| Sbjct: 1230 tcctccatggcgaagtgcggcagcagcagcg 1200
>dbj|AK060722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F11, full insert sequence Length = 1383 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 469 aaccgctctggcacaaattcatcgggcctctcccatgcttcagggtcgcgcatgatggac 528 |||||||| ||||| || || |||||||||||||| || | | |||||||||||| | | Sbjct: 924 aaccgctccggcacgaactcgtcgggcctctcccacgccgccgcgtcgcgcatgatcgcc 865 Query: 529 cacgagttgaaga 541 |||| |||||||| Sbjct: 864 cacgcgttgaaga 852
>ref|XM_466363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1520 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Plus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtg 549 ||||| |||||||| || | |||||||||||||| | ||||| ||||||||| | ||| Sbjct: 121 tcggggctctcccacgccgccgggtcgcgcatgatcgcccacgcgttgaagatcaccgtg 180 Query: 550 gcgcccataggcacgtcatagccgcctatctccacgccctcct 592 | |||| | |||||| | ||||| || ||||| ||||| |||| Sbjct: 181 gtgcccttgggcacggcgtagccaccgatctcgacgccgtcct 223
>ref|XM_466362.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Minus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtg 549 ||||| |||||||| || | |||||||||||||| | ||||| ||||||||| | ||| Sbjct: 1244 tcggggctctcccacgccgccgggtcgcgcatgatcgcccacgcgttgaagatcaccgtg 1185 Query: 550 gcgcccataggcacgtcatagccgcctatctccacgccctcct 592 | |||| | |||||| | ||||| || ||||| ||||| |||| Sbjct: 1184 gtgcccttgggcacggcgtagccaccgatctcgacgccgtcct 1142
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Plus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtg 549 ||||| |||||||| || | |||||||||||||| | ||||| ||||||||| | ||| Sbjct: 107622 tcggggctctcccacgccgccgggtcgcgcatgatcgcccacgcgttgaagatcaccgtg 107681 Query: 550 gcgcccataggcacgtcatagccgcctatctccacgccctcct 592 | |||| | |||||| | ||||| || ||||| ||||| |||| Sbjct: 107682 gtgcccttgggcacggcgtagccaccgatctcgacgccgtcct 107724
>dbj|AK105571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D01, full insert sequence Length = 1520 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Plus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtg 549 ||||| |||||||| || | |||||||||||||| | ||||| ||||||||| | ||| Sbjct: 121 tcggggctctcccacgccgccgggtcgcgcatgatcgcccacgcgttgaagatcaccgtg 180 Query: 550 gcgcccataggcacgtcatagccgcctatctccacgccctcct 592 | |||| | |||||| | ||||| || ||||| ||||| |||| Sbjct: 181 gtgcccttgggcacggcgtagccaccgatctcgacgccgtcct 223
>dbj|AK101003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147I20, full insert sequence Length = 1642 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Minus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtg 549 ||||| |||||||| || | |||||||||||||| | ||||| ||||||||| | ||| Sbjct: 1296 tcggggctctcccacgccgccgggtcgcgcatgatcgcccacgcgttgaagatcaccgtg 1237 Query: 550 gcgcccataggcacgtcatagccgcctatctccacgccctcct 592 | |||| | |||||| | ||||| || ||||| ||||| |||| Sbjct: 1236 gtgcccttgggcacggcgtagccaccgatctcgacgccgtcct 1194
>emb|CR382338.10| Zebrafish DNA sequence from clone DKEY-104N9 in linkage group 8, complete sequence Length = 169019 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 taaactggaatgaaacaaatgc 66 |||||||||||||||||||||| Sbjct: 24082 taaactggaatgaaacaaatgc 24061
>ref|XM_483259.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1518 Score = 42.1 bits (21), Expect = 2.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 493 ggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtggcg 552 ||||||||||| ||| ||||||| |||||||| | |||| ||||| || | || | | Sbjct: 1232 ggcctctcccacgctgcagggtctcgcatgatagtccacacattgaatatcacagtcgag 1173 Query: 553 cccataggcacgtcatagccgcctatctccacgccctcctc 593 ||| | |||||| | |||||||| ||||||||||| ||||| Sbjct: 1172 cccttcggcacggcgtagccgccgatctccacgccgtcctc 1132
>ref|NM_193526.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatgg 526 |||||||||||||| || | |||||||||||||||| Sbjct: 1289 tcgggcctctcccacgccgccgggtcgcgcatgatgg 1253
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 caacatggatgccaccatgaa 359 ||||||||||||||||||||| Sbjct: 31933 caacatggatgccaccatgaa 31953
>emb|AL160174.12| Human DNA sequence from clone RP11-333H4 on chromosome 10, complete sequence Length = 130574 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 atagatagatagaagatgcatgcat 92 ||||||||||||||||| ||||||| Sbjct: 77001 atagatagatagaagatacatgcat 76977
>gb|AF488521.1| Oryza sativa Cyt-P450 monooxygenase (PM-I) mRNA, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 2.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 493 ggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtggcg 552 ||||||||||| ||| ||||||| |||||||| | |||| ||||| || | || | | Sbjct: 1262 ggcctctcccacgctgcagggtctcgcatgatagtccacacattgaatatcacagtcgag 1203 Query: 553 cccataggcacgtcatagccgcctatctccacgccctcctc 593 ||| | |||||| | |||||||| ||||||||||| ||||| Sbjct: 1202 cccttcggcacggcgtagccgccgatctccacgccgtcctc 1162
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 gggtcgcgcatgatggaccac 531 ||||||||||||||||||||| Sbjct: 16656924 gggtcgcgcatgatggaccac 16656944
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatgg 526 |||||||||||||| || | |||||||||||||||| Sbjct: 21338774 tcgggcctctcccacgccgccgggtcgcgcatgatgg 21338810
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatgg 526 |||||||||||||| || | |||||||||||||||| Sbjct: 60712 tcgggcctctcccacgccgccgggtcgcgcatgatgg 60748
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 gggtcgcgcatgatggaccac 531 ||||||||||||||||||||| Sbjct: 5618 gggtcgcgcatgatggaccac 5638
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 gggtcgcgcatgatggaccac 531 ||||||||||||||||||||| Sbjct: 65063 gggtcgcgcatgatggaccac 65083
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 42.1 bits (21), Expect = 2.2 Identities = 81/101 (80%) Strand = Plus / Plus Query: 493 ggcctctcccatgcttcagggtcgcgcatgatggaccacgagttgaagatgatggtggcg 552 ||||||||||| ||| ||||||| |||||||| | |||| ||||| || | || | | Sbjct: 158935 ggcctctcccacgctgcagggtctcgcatgatagtccacacattgaatatcacagtcgag 158994 Query: 553 cccataggcacgtcatagccgcctatctccacgccctcctc 593 ||| | |||||| | |||||||| ||||||||||| ||||| Sbjct: 158995 cccttcggcacggcgtagccgccgatctccacgccgtcctc 159035
>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full insert sequence Length = 1939 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 490 tcgggcctctcccatgcttcagggtcgcgcatgatgg 526 |||||||||||||| || | |||||||||||||||| Sbjct: 1404 tcgggcctctcccacgccgccgggtcgcgcatgatgg 1368
>gb|AC121542.8| Mus musculus chromosome 15, clone RP24-137J5, complete sequence Length = 164489 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgccaaccaatatgaataca 131 |||||||||||||||||||| Sbjct: 33072 tgccaaccaatatgaataca 33091
>ref|XM_601341.2| PREDICTED: Bos taurus similar to Histone-lysine N-methyltransferase, H3 lysine-9 specific 1 (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog 1) (Su(var)3-9 homolog 1) (LOC523047), mRNA Length = 1826 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cagcctccggccggtgccca 415 |||||||||||||||||||| Sbjct: 674 cagcctccggccggtgccca 655
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence Length = 254081 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 gagttgaagatgatggtggc 551 |||||||||||||||||||| Sbjct: 92742 gagttgaagatgatggtggc 92761
>emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 in linkage group 2, complete sequence Length = 180976 Score = 40.1 bits (20), Expect = 8.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 68 atagatagataga-agatgcatgcatgactgt 98 ||||||||||||| ||||||||||||| |||| Sbjct: 12915 atagatagatagatagatgcatgcatgtctgt 12946
>gb|BC111156.1| Bos taurus similar to Histone-lysine N-methyltransferase, H3 lysine-9 specific 1 (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog 1) (Su(var)3-9 homolog 1), mRNA (cDNA clone MGC:134617 IMAGE:8053049), complete cds Length = 2888 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cagcctccggccggtgccca 415 |||||||||||||||||||| Sbjct: 606 cagcctccggccggtgccca 587
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 aaaccgctctggcacaaatt 487 |||||||||||||||||||| Sbjct: 1688724 aaaccgctctggcacaaatt 1688705
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ttcatcgggcctctcccatg 505 |||||||||||||||||||| Sbjct: 266360 ttcatcgggcctctcccatg 266341
>gb|AC011930.5|AC011930 Homo sapiens, clone RP11-16B21, complete sequence Length = 164168 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ccatttattagttaagagca 33 |||||||||||||||||||| Sbjct: 40502 ccatttattagttaagagca 40483
>emb|BX784393.3| Zebrafish DNA sequence from clone DKEY-126N3 in linkage group 1, complete sequence Length = 117152 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acaaatgctatagatagatagaag 82 |||||| ||||||||||||||||| Sbjct: 88947 acaaatactatagatagatagaag 88970
>gb|AC132361.4| Mus musculus BAC clone RP24-149E13 from chromosome 1, complete sequence Length = 158837 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 tgccaaccaataggaaagtacgta 169 |||||||||| ||||||||||||| Sbjct: 128253 tgccaaccaaaaggaaagtacgta 128276
>gb|AC015550.19| Homo sapiens 12 BAC RP11-254B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 140300 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catgcatgactgttcatagccatg 109 ||||||||||||| |||||||||| Sbjct: 90166 catgcatgactgtacatagccatg 90189
>gb|AF298183.1|AF298183 Micropogonias undulatus estrogen receptor alpha mRNA, partial cds Length = 2390 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 acctggtcaggtgacatgcc 311 |||||||||||||||||||| Sbjct: 643 acctggtcaggtgacatgcc 624
>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7, complete sequence Length = 147943 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctccaccatgggcaatgcag 391 |||||||||||||||||||| Sbjct: 123965 ctccaccatgggcaatgcag 123984
>gb|BC084212.1| Xenopus laevis hypothetical LOC495057, mRNA (cDNA clone MGC:80561 IMAGE:5440034), complete cds Length = 5062 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 tgccatgctctgtcttccccaaaa 469 ||||||| |||||||||||||||| Sbjct: 3161 tgccatggtctgtcttccccaaaa 3184
>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence Length = 195993 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ctctcggtcacatccacctggtca 300 |||||||||| ||||||||||||| Sbjct: 59218 ctctcggtcaaatccacctggtca 59195
>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete sequence Length = 183291 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 cacatgccatgctctgtctt 461 |||||||||||||||||||| Sbjct: 122728 cacatgccatgctctgtctt 122747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,991,172 Number of Sequences: 3902068 Number of extensions: 5991172 Number of successful extensions: 109295 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 108827 Number of HSP's gapped (non-prelim): 461 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
