ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags18c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence Length = 916 Score = 313 bits (158), Expect = 3e-82 Identities = 266/302 (88%) Strand = Plus / Minus Query: 185 gatcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggag 244 ||||||||| |||| | ||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 611 gatcagtgctggatgggagggctgcagtaggggcccttgagccagccgtcggcaatggag 552 Query: 245 cggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagag 304 ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| | | Sbjct: 551 cggtaggccgcctcggtgaggtggatgccgtcccagatgaggtagttgcccgggtcggcg 492 Query: 305 caggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgc 364 |||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 491 caggcgctggccccggccatgccgcaccgcgccttgttgttgtagccgtactggccctgc 432 Query: 365 ccgccggctccgcagcacaccttcagcccatacttgaggccgaaattctgaggggcccgg 424 |||||||| |||||||| ||||| || || |||||||| ||||| || |||||||||||| Sbjct: 431 ccgccggcgccgcagcagaccttgaggccgtacttgagcccgaagttgtgaggggcccgg 372 Query: 425 atcatctggatgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtc 484 ||||| ||| ||||||| | ||||||||||||||||||||||| || ||| ||||| ||| Sbjct: 371 atcatgtgggtgacctgggtgtagaagtcggcgtacatgatccgggcgtgcgggtacgtc 312 Query: 485 ct 486 || Sbjct: 311 ct 310
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 206 bits (104), Expect = 5e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 186 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 245 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 10490 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 10431 Query: 246 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 305 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 10430 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 10371 Query: 306 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 365 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 10370 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 10311 Query: 366 cgccggctccgcagcacaccttcagccc 393 | || || |||||||||||||||||||| Sbjct: 10310 ctcccgccccgcagcacaccttcagccc 10283 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 233 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 46209 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 46162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 254 gcctcggtgagatggatgccgtcccagatgaggtag 289 ||||||||||||||||||||||||||| ||| |||| Sbjct: 61848 gcctcggtgagatggatgccgtcccagttgacgtag 61813
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 206 bits (104), Expect = 5e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 186 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 245 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 77391 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 77332 Query: 246 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 305 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 77331 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 77272 Query: 306 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 365 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 77271 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 77212 Query: 366 cgccggctccgcagcacaccttcagccc 393 | || || |||||||||||||||||||| Sbjct: 77211 ctcccgccccgcagcacaccttcagccc 77184 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 233 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 113110 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 113063
>gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative lipase mRNA, complete cds Length = 1413 Score = 206 bits (104), Expect = 5e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 186 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 245 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1149 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1090 Query: 246 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 305 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 1089 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1030 Query: 306 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 365 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 1029 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 970 Query: 366 cgccggctccgcagcacaccttcagccc 393 | || || |||||||||||||||||||| Sbjct: 969 ctcccgccccgcagcacaccttcagccc 942
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 206 bits (104), Expect = 5e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 186 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 245 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 6706229 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 6706170 Query: 246 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 305 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 6706169 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 6706110 Query: 306 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 365 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 6706109 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 6706050 Query: 366 cgccggctccgcagcacaccttcagccc 393 | || || |||||||||||||||||||| Sbjct: 6706049 ctcccgccccgcagcacaccttcagccc 6706022 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 233 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 6741948 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 6741901 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 254 gcctcggtgagatggatgccgtcccagatgaggtag 289 ||||||||||||||||||||||||||| ||| |||| Sbjct: 6757587 gcctcggtgagatggatgccgtcccagttgacgtag 6757552
>dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I03, full insert sequence Length = 1410 Score = 206 bits (104), Expect = 5e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 186 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 245 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1153 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1094 Query: 246 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 305 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 1093 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1034 Query: 306 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 365 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 1033 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 974 Query: 366 cgccggctccgcagcacaccttcagccc 393 | || || |||||||||||||||||||| Sbjct: 973 ctcccgccccgcagcacaccttcagccc 946
>dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B05, full insert sequence Length = 1422 Score = 206 bits (104), Expect = 5e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 186 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 245 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1164 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1105 Query: 246 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 305 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 1104 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1045 Query: 306 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 365 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 1044 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 985 Query: 366 cgccggctccgcagcacaccttcagccc 393 | || || |||||||||||||||||||| Sbjct: 984 ctcccgccccgcagcacaccttcagccc 957
>ref|XM_476136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 204 bits (103), Expect = 2e-49 Identities = 166/187 (88%) Strand = Plus / Minus Query: 207 tgcagtaagggcccttgagccagccattggcgatggagcggtacgccgcctcggtgagat 266 ||||||| ||||||||||||||||||| ||||||||||||||| || |||||||| || | Sbjct: 1066 tgcagtaggggcccttgagccagccatcggcgatggagcggtaggcggcctcggtaaggt 1007 Query: 267 ggatgccgtcccagatgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgc 326 |||||||||||||||||||||||||| |||||| | ||||||||| | ||||| ||||| Sbjct: 1006 ggatgccgtcccagatgaggtagttggccgggtcggcgcaggcgctggacccggacatgc 947 Query: 327 cgcaccttgccttgttgttgtagttgtacttgccctgcccgccggctccgcagcacacct 386 |||||| || |||||||||||||||||| | |||||||| || || ||||||||||||| Sbjct: 946 cgcaccgcgctttgttgttgtagttgtacgtcccctgccctcccgccccgcagcacacct 887 Query: 387 tcagccc 393 ||||||| Sbjct: 886 tcagccc 880
>ref|NM_188436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 69.9 bits (35), Expect = 7e-09 Identities = 140/175 (80%) Strand = Plus / Minus Query: 222 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 281 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 1060 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1001 Query: 282 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 341 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 1000 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 941 Query: 342 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 396 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 940 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 886
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 7e-09 Identities = 140/175 (80%) Strand = Plus / Minus Query: 222 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 281 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 6269493 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 6269434 Query: 282 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 341 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 6269433 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 6269374 Query: 342 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 396 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 6269373 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 6269319 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 6282199 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 6282142 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 6319626 cgtagtagtcggcgtacatgatcctgg 6319600 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 246 ggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||||||||||||| || | |||||||||| Sbjct: 6305210 ggtacgccgcctcggtgaggtgcacgccgtcccag 6305176 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 6380761 gccgcctccgtgaggtggatgccgtcccag 6380732 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 6365981 gccgcctccgtgaggtggatgccgtcccag 6365952 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 6342892 gccgcctccgtgaggtggatgccgtcccag 6342863
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 69.9 bits (35), Expect = 7e-09 Identities = 140/175 (80%) Strand = Plus / Minus Query: 222 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 281 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 131691 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 131632 Query: 282 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 341 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 131631 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 131572 Query: 342 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 396 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 131571 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 131517 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 144397 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 144340 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 246 ggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||||||||||||| || | |||||||||| Sbjct: 167408 ggtacgccgcctcggtgaggtgcacgccgtcccag 167374
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 69.9 bits (35), Expect = 7e-09 Identities = 140/175 (80%) Strand = Plus / Minus Query: 222 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 281 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 40559 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 40500 Query: 282 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 341 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 40499 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 40440 Query: 342 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 396 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 40439 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 40385 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 53265 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 53208 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 90692 cgtagtagtcggcgtacatgatcctgg 90666 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 246 ggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||||||||||||| || | |||||||||| Sbjct: 76276 ggtacgccgcctcggtgaggtgcacgccgtcccag 76242 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 151827 gccgcctccgtgaggtggatgccgtcccag 151798 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 137047 gccgcctccgtgaggtggatgccgtcccag 137018 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 113958 gccgcctccgtgaggtggatgccgtcccag 113929
>dbj|AK105422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B12, full insert sequence Length = 1772 Score = 69.9 bits (35), Expect = 7e-09 Identities = 140/175 (80%) Strand = Plus / Minus Query: 222 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 281 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 1493 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1434 Query: 282 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 341 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 1433 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 1374 Query: 342 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 396 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 1373 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 1319
>dbj|AK103614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K20, full insert sequence Length = 1416 Score = 69.9 bits (35), Expect = 7e-09 Identities = 140/175 (80%) Strand = Plus / Minus Query: 222 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 281 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 1137 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1078 Query: 282 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 341 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 1077 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 1018 Query: 342 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 396 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 1017 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 963
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 233 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 1043 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 996
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full insert sequence Length = 1551 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 233 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 1133 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 1086
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 1071 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 1014
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 2894454 gtacgccgcctccgtgagatggatgccgtcccag 2894421 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 254 gcctcggtgagatggatgccgtcccag 280 ||||||||||| ||||||||||||||| Sbjct: 2907403 gcctcggtgaggtggatgccgtcccag 2907429 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 443 gcgtagaagtcggcgtacatgatcct 468 |||||| ||||||||||||||||||| Sbjct: 1572550 gcgtagtagtcggcgtacatgatcct 1572525 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 224 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 19518616 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 19518672 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 2908379 gtagaagtcggcgtacatgat 2908399 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 2893797 gtagaagtcggcgtacatgat 2893777 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 caccttgccttgttgttgtagttgtacttgcc 360 ||||| || ||||||||||||||| ||||||| Sbjct: 2907478 cacctcgcgttgttgttgtagttgaacttgcc 2907509 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgatcct 468 |||| ||||||||||||||||||| Sbjct: 2899040 gtagtagtcggcgtacatgatcct 2899017
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 137935 gtacgccgcctccgtgagatggatgccgtcccag 137902 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 137278 gtagaagtcggcgtacatgat 137258 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgatcct 468 |||| ||||||||||||||||||| Sbjct: 142521 gtagtagtcggcgtacatgatcct 142498
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 54600 gtacgccgcctccgtgagatggatgccgtcccag 54567 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 254 gcctcggtgagatggatgccgtcccag 280 ||||||||||| ||||||||||||||| Sbjct: 67549 gcctcggtgaggtggatgccgtcccag 67575 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 68525 gtagaagtcggcgtacatgat 68545 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 53943 gtagaagtcggcgtacatgat 53923 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 caccttgccttgttgttgtagttgtacttgcc 360 ||||| || ||||||||||||||| ||||||| Sbjct: 67624 cacctcgcgttgttgttgtagttgaacttgcc 67655 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgatcct 468 |||| ||||||||||||||||||| Sbjct: 59186 gtagtagtcggcgtacatgatcct 59163
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full insert sequence Length = 1430 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 1088 gtacgccgcctccgtgagatggatgccgtcccag 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 893 gtagaagtcggcgtacatgat 873
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full insert sequence Length = 1429 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 1087 gtacgccgcctccgtgagatggatgccgtcccag 1054 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 892 gtagaagtcggcgtacatgat 872
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 995 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 938
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full insert sequence Length = 1417 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 1085 gtacgccgcctccgtgagatggatgccgtcccag 1052 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 890 gtagaagtcggcgtacatgat 870
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 1223 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 1166
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full insert sequence Length = 1450 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||| ||||||||||||||||||||| Sbjct: 1085 gtacgccgcctccgtgagatggatgccgtcccag 1052 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 890 gtagaagtcggcgtacatgat 870
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 995 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 938
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence Length = 811 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 247 gtacgccgcctcggtgagatggatgccgtcccagatgaggt 287 |||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 508 gtacgcggcctcggtgaggtggatgccgtcccagctgaggt 468 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 310 gtagaagtcggcgtacatgat 290
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 254 gcctcggtgagatggatgccgtcccagatgaggtag 289 ||||||||||||||||||||||||||| ||| |||| Sbjct: 1064 gcctcggtgagatggatgccgtcccagttgacgtag 1029
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 254 gcctcggtgagatggatgccgtcccagatgaggt 287 ||||||||||| ||||||||||||||| |||||| Sbjct: 1180 gcctcggtgaggtggatgccgtcccagctgaggt 1147 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 443 gcgtagaagtcggcgtacatgat 465 ||||||||||||||||||||||| Sbjct: 994 gcgtagaagtcggcgtacatgat 972
>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence Length = 117723 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 130 catcaagtcaataaataaaacaataa 155 |||||||||||||||||||||||||| Sbjct: 72002 catcaagtcaataaataaaacaataa 72027
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 254 gcctcggtgagatggatgccgtcccagatgaggt 287 ||||||||||| ||||||||||||||| |||||| Sbjct: 1131 gcctcggtgaggtggatgccgtcccagctgaggt 1098 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 943 gtagaagtcggcgtacatgat 923
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA sequence Length = 1334 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgatcctggtgtgggggta 480 |||||||||||||||||||||| ||| || |||||| Sbjct: 869 gtagaagtcggcgtacatgatcttggcgtaggggta 834 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 317 ccggccatgccgcaccttgccttgttgttgtagttgtacttgcc 360 |||| |||||||||||| ||| ||| | ||||||||||||||| Sbjct: 994 ccggacatgccgcacctagccccgttctggtagttgtacttgcc 951
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 51 aaaattcatcatattagttgttac 74 |||||||||||||||||||||||| Sbjct: 82727 aaaattcatcatattagttgttac 82750
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA Length = 1125 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 874 cgtagtagtcggcgtacatgatcctgg 848
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 246 ggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||||||||||||| || | |||||||||| Sbjct: 1045 ggtacgccgcctcggtgaggtgcacgccgtcccag 1011
>gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67150 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 gccctgcccgccggctccgcagc 380 ||||||||||||||||||||||| Sbjct: 35902 gccctgcccgccggctccgcagc 35924
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 937 cgtagtagtcggcgtacatgatcctgg 911
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full insert sequence Length = 1520 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 934 cgtagtagtcggcgtacatgatcctgg 908
>dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C19, full insert sequence Length = 1623 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 246 ggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||||||||||||| || | |||||||||| Sbjct: 1228 ggtacgccgcctcggtgaggtgcacgccgtcccag 1194
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full insert sequence Length = 1392 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 254 gcctcggtgagatggatgccgtcccag 280 ||||||||||| ||||||||||||||| Sbjct: 1029 gcctcggtgaggtggatgccgtcccag 1003 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgat 465 ||||||||||||||||||||| Sbjct: 841 gtagaagtcggcgtacatgat 821 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 329 caccttgccttgttgttgtagttgtacttgcc 360 ||||| || ||||||||||||||| ||||||| Sbjct: 954 cacctcgcgttgttgttgtagttgaacttgcc 923
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 937 cgtagtagtcggcgtacatgatcctgg 911
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full insert sequence Length = 1622 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 246 ggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||||||||||||| || | |||||||||| Sbjct: 1227 ggtacgccgcctcggtgaggtgcacgccgtcccag 1193
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full insert sequence Length = 1691 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcctgg 470 ||||| ||||||||||||||||||||| Sbjct: 1197 cgtagtagtcggcgtacatgatcctgg 1171
>ref|NM_185495.1| Oryza sativa (japonica cultivar-group), Ozsa8592 predicted mRNA Length = 642 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 443 gcgtagaagtcggcgtacatgatcct 468 |||||| ||||||||||||||||||| Sbjct: 389 gcgtagtagtcggcgtacatgatcct 364
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 1034 gccgcctccgtgaggtggatgccgtcccag 1005
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 1061 gccgcctccgtgaggtggatgccgtcccag 1032
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA Length = 1194 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 1067 gccgcctccgtgaggtggatgccgtcccag 1038
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 235 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 14135818 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 14135773
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 235 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 10109 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 10064
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 235 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 14130793 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 14130748
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 3156 gccgcctccgtgaggtggatgccgtcccag 3127
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 443 gcgtagaagtcggcgtacatgatcct 468 |||||| ||||||||||||||||||| Sbjct: 101274 gcgtagtagtcggcgtacatgatcct 101249
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full insert sequence Length = 1526 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>dbj|AK069388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H01, full insert sequence Length = 942 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 235 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 676 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 631
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full insert sequence Length = 1531 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gccgcctcggtgagatggatgccgtcccag 280 |||||||| ||||| ||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence Length = 847 Score = 44.1 bits (22), Expect = 0.42 Identities = 49/58 (84%) Strand = Plus / Minus Query: 223 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 ||||||||| |||||||| || ||| || ||||| ||||| ||||||||||||||| Sbjct: 354 gagccagcccctggcgatgtggccgtaggcggcctccgtgaggtggatgccgtcccag 297
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence Length = 1460 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 248 tacgccgcctcggtgagatggatgccgtcccagatgag 285 ||||||||||| || || ||||||||||||||| |||| Sbjct: 1098 tacgccgcctccgtcaggtggatgccgtcccagctgag 1061 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatga 464 |||||||||||||||||||| Sbjct: 904 gtagaagtcggcgtacatga 885
>gb|AF526280.1| Sida crystallina elongation factor-1 alpha gene, partial cds Length = 1228 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 gatgacctgcgcgtagaagtcggcg 457 ||||||||| ||||||||||||||| Sbjct: 992 gatgacctgagcgtagaagtcggcg 968
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence Length = 112873 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ataaaattcatcatattagtt 69 ||||||||||||||||||||| Sbjct: 79674 ataaaattcatcatattagtt 79694
>emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on chromosome X Contains a novel pseudogene and a lactate dehydrogenase B pseudogene, complete sequence Length = 155885 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 attcatcatattagttgttac 74 ||||||||||||||||||||| Sbjct: 145867 attcatcatattagttgttac 145847
>emb|AL096709.11|HSDJ20N4 Human DNA sequence from clone RP1-20N4 on chromosome 6q12-13 Contains a beclin 1 (BECN1) pseudogene, complete sequence Length = 138025 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 attcatcatattagttgttac 74 ||||||||||||||||||||| Sbjct: 48232 attcatcatattagttgttac 48212
>ref|XM_965306.1| PREDICTED: Tribolium castaneum similar to CG3943-PA (LOC658960), mRNA Length = 1081 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 tggatgccgtcccagatgaggtagt 290 |||||||||||||||| |||||||| Sbjct: 275 tggatgccgtcccagaagaggtagt 251
>gb|AE005972.1| Caulobacter crescentus CB15 section 298 of 359 of the complete genome Length = 11923 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 cagagcaggcgctcgccccgg 320 ||||||||||||||||||||| Sbjct: 1004 cagagcaggcgctcgccccgg 1024
>gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, complete sequence Length = 174399 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 attcatcatattagttgttac 74 ||||||||||||||||||||| Sbjct: 156719 attcatcatattagttgttac 156739
>gb|AC093781.2| Homo sapiens BAC clone RP11-183D16 from 4, complete sequence Length = 156058 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 attcatcatattagttgttac 74 ||||||||||||||||||||| Sbjct: 20157 attcatcatattagttgttac 20177
>gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, complete sequence Length = 95291 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 attcatcatattagttgttac 74 ||||||||||||||||||||| Sbjct: 57779 attcatcatattagttgttac 57799
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 224 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 348 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 404
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 224 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 137025 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 137081
>gb|AC022517.1|AC022517 Homo sapiens chromosome 19, BC335474 (CIT-HSPC_482H14), complete sequence Length = 157566 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 cgggggctgcagtaagggcccttga 224 |||||||||||||||||||| |||| Sbjct: 109398 cgggggctgcagtaagggcctttga 109374
>dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P18, full insert sequence Length = 1580 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 224 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 1215 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 1159
>dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F12, full insert sequence Length = 1323 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 224 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 280 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 1211 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 1155
>emb|CR925735.15| Zebrafish DNA sequence from clone CH211-105G15 in linkage group 17, complete sequence Length = 83530 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaataaaacaataatacgtaa 162 ||||||||||||||||||||| Sbjct: 45401 aaataaaacaataatacgtaa 45421
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ttgtacttgccctgcccgccg 370 ||||||||||||||||||||| Sbjct: 663869 ttgtacttgccctgcccgccg 663889
>ref|XM_515097.1| PREDICTED: Pan troglodytes similar to tissue inhibitor of metalloproteinase 3; Tissue inhibitor of metalloproteinase-3; K222 expressed in degenerative retinas (LOC458784), mRNA Length = 1767 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gggcccttgagccagccatt 234 |||||||||||||||||||| Sbjct: 41 gggcccttgagccagccatt 60
>gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence Length = 1420 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 343 gttgtagttgtacttgccctgcccgccggctccgcagcac 382 |||| ||||||| ||||||||||| || || ||||||||| Sbjct: 1080 gttgaagttgtagttgccctgccctcctgcgccgcagcac 1041
>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence Length = 226673 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 18594 aagtgaataaataaaacaataata 18571
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gcaggcgctcgccccggcca 323 |||||||||||||||||||| Sbjct: 53182 gcaggcgctcgccccggcca 53163
>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 50229 aagtgaataaataaaacaataata 50252
>gb|AY521557.1| Cancer magister clone Cma14 microsatellite sequence Length = 592 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gtcaataaataaaacaataa 155 |||||||||||||||||||| Sbjct: 514 gtcaataaataaaacaataa 495
>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete sequence Length = 221748 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 ctcacaaaacgcatcaagtcaata 142 ||||||||||| |||||||||||| Sbjct: 196345 ctcacaaaacgtatcaagtcaata 196322
>gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, complete sequence Length = 216326 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agtcaataaataaaacaata 154 |||||||||||||||||||| Sbjct: 82124 agtcaataaataaaacaata 82143
>emb|CR361548.8| Zebrafish DNA sequence from clone CH211-140M22 in linkage group 1, complete sequence Length = 146409 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 aagtcaataaataaaacaataata 157 |||||||||||||||| ||||||| Sbjct: 35536 aagtcaataaataaaaaaataata 35559
>emb|Z72521.1|HSN29F4 Human DNA sequence from clone LL22NC03-29F4 on chromosome 22, complete sequence Length = 19912 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gggcccttgagccagccatt 234 |||||||||||||||||||| Sbjct: 923 gggcccttgagccagccatt 942
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA sequence Length = 1342 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 cgtagaagtcggcgtacatgatcc 467 ||||| |||||||||||||||||| Sbjct: 954 cgtagtagtcggcgtacatgatcc 931
>gb|BT009047.1| Triticum aestivum clone wdk9n.pk001.k24:fis, full insert mRNA sequence Length = 1226 Score = 40.1 bits (20), Expect = 6.6 Identities = 71/88 (80%) Strand = Plus / Minus Query: 267 ggatgccgtcccagatgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgc 326 |||||||||||||| | | ||||| || ||||| ||||||||| | |||| ||||| Sbjct: 1005 ggatgccgtcccagttcaaatagttctgagggtccttgcaggcgcttgagccggacatgc 946 Query: 327 cgcaccttgccttgttgttgtagttgta 354 | ||||| ||||| || ||||||||||| Sbjct: 945 cacacctcgccttattattgtagttgta 918
>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to 4010779 Length = 201139 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cccgccggctccgcagcaca 383 |||||||||||||||||||| Sbjct: 3999 cccgccggctccgcagcaca 4018
>emb|Z49782.1|BSDNA320D B.subtilis chromosomal DNA (region 320-321 degrees) Length = 25940 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cccgccggctccgcagcaca 383 |||||||||||||||||||| Sbjct: 7164 cccgccggctccgcagcaca 7145
>emb|BX957284.5| Zebrafish DNA sequence from clone CH211-10N1 in linkage group 10, complete sequence Length = 60530 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caataaataaaacaataata 157 |||||||||||||||||||| Sbjct: 58629 caataaataaaacaataata 58610
>emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in linkage group 16, complete sequence Length = 188754 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tcccaccacgcacactcaca 124 |||||||||||||||||||| Sbjct: 136272 tcccaccacgcacactcaca 136253
>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence Length = 177962 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 ccgcaccttgccttgttgttgtag 349 |||||||| ||||||||||||||| Sbjct: 142999 ccgcacctggccttgttgttgtag 143022
>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10, complete sequence Length = 258048 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caataaataaaacaataata 157 |||||||||||||||||||| Sbjct: 99 caataaataaaacaataata 80
>gb|AY758220.1| Spartina alterniflora clone Spar.24 microsatellite sequence Length = 559 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttgttgttgtagttgtactt 357 |||||||||||||||||||| Sbjct: 530 ttgttgttgtagttgtactt 549
>emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in linkage group 14, complete sequence Length = 197865 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 aataaataaaacaataatac 158 |||||||||||||||||||| Sbjct: 141814 aataaataaaacaataatac 141833
>gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map mi398, complete sequence Length = 89281 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 aaaacaataatacgtaaatcaaca 169 |||| ||||||||||||||||||| Sbjct: 80305 aaaataataatacgtaaatcaaca 80328
>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence Length = 171413 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 taaataaaacaataatacgtaaat 164 ||||||| |||||||||||||||| Sbjct: 27749 taaataatacaataatacgtaaat 27726
>gb|AC155321.2| Pan troglodytes BAC clone CH251-489N11 from chromosome unknown, complete sequence Length = 202104 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gggcccttgagccagccatt 234 |||||||||||||||||||| Sbjct: 109690 gggcccttgagccagccatt 109671
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 92719 aagtaaataaataaaacaataata 92696
>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence Length = 143619 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 ccgcaccttgccttgttgttgtag 349 |||||||| ||||||||||||||| Sbjct: 15297 ccgcacctggccttgttgttgtag 15320
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gcaggcgctcgccccggcca 323 |||||||||||||||||||| Sbjct: 52857 gcaggcgctcgccccggcca 52838
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full insert sequence Length = 1439 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtagaagtcggcgtacatgatcct 468 |||| ||||||||||||||||||| Sbjct: 980 gtagtagtcggcgtacatgatcct 957
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 aggcgctcgccccggccatgccgc 329 ||||||| |||||||||||||||| Sbjct: 3030070 aggcgctggccccggccatgccgc 3030047
>gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, complete sequence Length = 150474 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 aagtcaataaataaaacaataata 157 |||||||||||||||| ||||||| Sbjct: 94351 aagtcaataaataaaaaaataata 94328
>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence Length = 197546 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 9906 aagtaaataaataaaacaataata 9929
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 37 ttaattacccccataaaattcatcatat 64 |||||| |||||||||||| |||||||| Sbjct: 3254160 ttaatttcccccataaaatccatcatat 3254187
>gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190211 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tcaataaataaaacaataat 156 |||||||||||||||||||| Sbjct: 44283 tcaataaataaaacaataat 44302
>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10, complete sequence Length = 156034 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 caataaataaaacaataata 157 |||||||||||||||||||| Sbjct: 130724 caataaataaaacaataata 130743
>gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, complete sequence Length = 168611 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tcaataaataaaacaataat 156 |||||||||||||||||||| Sbjct: 149868 tcaataaataaaacaataat 149887
>gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complete sequence Length = 218532 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 211536 aagtgaataaataaaacaataata 211513
>gb|AC148332.3| Mus musculus BAC clone RP23-326L8 from 6, complete sequence Length = 229988 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 40446 aagtgaataaataaaacaataata 40469
>gb|AC150746.2| Mus musculus BAC clone RP23-364B18 from 6, complete sequence Length = 215490 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 aagtcaataaataaaacaataata 157 |||| ||||||||||||||||||| Sbjct: 145769 aagtgaataaataaaacaataata 145746
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ctcacaaaacgcatcaagtcaata 142 ||||||||||| |||||||||||| Sbjct: 121273 ctcacaaaacgtatcaagtcaata 121296
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gcaggcgctcgccccggcca 323 |||||||||||||||||||| Sbjct: 49258 gcaggcgctcgccccggcca 49239
>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete sequence Length = 184866 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tacatccacacatagacatg 91 |||||||||||||||||||| Sbjct: 18856 tacatccacacatagacatg 18837
>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete sequence Length = 205436 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 140 ataaataaaacaataatacgtaaatcaacatt 171 |||||||||||||| ||| |||||||||||| Sbjct: 69099 ataaataaaacaattataattaaatcaacatt 69068
>gb|M23964.1|MUSPGK1PS4 Mus musculus phosphoglycerate kinase (Pgk1-ps4) processed pseudogene Length = 1648 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 ctcacaaaacgcatcaagtcaata 142 ||||||||||| |||||||||||| Sbjct: 876 ctcacaaaacgtatcaagtcaata 853 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,580,633 Number of Sequences: 3902068 Number of extensions: 4580633 Number of successful extensions: 107956 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 107372 Number of HSP's gapped (non-prelim): 584 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
