ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17n04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550361.1| Oryza sativa (japonica cultivar-group), mRNA 194 3e-46
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46
3dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46
4dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46
5dbj|AK058497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
6ref|XM_617408.2| PREDICTED: Bos taurus similar to Neuronal acety... 46 0.14
7ref|XM_471524.1| Oryza sativa (japonica cultivar-group), predic... 44 0.57
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
9dbj|AK106614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
10emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,... 44 0.57
11gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome 42 2.2
12ref|XM_478765.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
13gb|BT018911.1| Zea mays clone EL01T0403D10.d mRNA sequence 42 2.2
14gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit... 42 2.2
15gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion... 42 2.2
16gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion... 42 2.2
17gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence 42 2.2
18emb|AL356318.7| Human DNA sequence from clone RP11-161E22 on chr... 42 2.2
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
20dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
21gb|AY104365.1| Zea mays PCO135860 mRNA sequence 42 2.2
22dbj|AB057536.1| Rana catesbeiana mRNA for natriuretic-peptide re... 42 2.2
23gb|DQ013804.1| Phyllostachys praecox RLK1 mRNA, partial cds 40 8.9
24gb|AC113957.8| Mus musculus chromosome 15, clone RP23-452M1, com... 40 8.9
25emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chr... 40 8.9
26gb|AC163438.3| Mus musculus chromosome 8, clone RP23-278M23, com... 40 8.9
27emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 i... 40 8.9
28gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, comp... 40 8.9
29ref|XM_678571.1| PREDICTED: Danio rerio similar to natriuretic p... 40 8.9
30gb|AC119807.11| Mus musculus chromosome 8, clone RP23-167I14, co... 40 8.9
31gb|AC016879.6| Homo sapiens chromosome 8, clone RP11-97P19, comp... 40 8.9
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
33emb|BX824799.1|CNS0A6RP Arabidopsis thaliana Full-length cDNA Co... 40 8.9
34gb|AC007098.4| Homo sapiens BAC clone RP11-443F16 from 2, comple... 40 8.9
35gb|AC078864.20| Homo sapiens 12 PAC RP1-288H2 (Roswell Park Canc... 40 8.9
36gb|AF238474.1|AF238474 Oryza sativa receptor-like kinase (RLG16)... 40 8.9
37gb|AF237568.1|AF237568 Oryza sativa receptor-like protein kinase... 40 8.9
38dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
39dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
40dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
41dbj|AK120121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
42emb|AL163193.5|HS73E6 Homo sapiens chromosome 9 BAC RP11-73E6, c... 40 8.9
43emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 i... 40 8.9
44gb|AY105609.1| Zea mays PCO130861 mRNA sequence 40 8.9
45gb|AF164021.1|AF164021 Oryza sativa clone GRLG4 receptor kinase ... 40 8.9
46gb|AF100764.1|AF100764 Oryza sativa OS8LRK pseudogene sequence 40 8.9
47gb|AC161468.2| Gallus gallus BAC clone CH261-94J19 from chromoso... 40 8.9
48gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromos... 40 8.9
49gb|AF044489.1|AF044489 Oryza sativa receptor-like protein kinase... 40 8.9
50emb|AL513498.2|HS336O12 Homo sapiens chromosome 9 BAC RP11-336O1... 40 8.9 
>ref|XM_550361.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1651

 Score =  194 bits (98), Expect = 3e-46
 Identities = 302/370 (81%)
 Strand = Plus / Minus

                                                                        
Query: 282  tcgagtctggcctaaacagctcttccttttcaagcctcaggagcatctctttcgattcgc 341
            ||||||||||||| ||||  || || |||||||||||    ||||||||||| ||||| |
Sbjct: 1203 tcgagtctggcctgaacaattcatcattttcaagcctggaaagcatctctttagattcac 1144

                                                                        
Query: 342  ctttcagcagggacacaacctcaagcatcgttggtctcttttccggttctctgtgcgtgc 401
            |||||||||  || ||||| || ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 1143 ctttcagcatcgatacaacttcgagcattgtcggtctcttttcaggttctctgtgtgtgc 1084

                                                                        
Query: 402  acgctaggccgatcagcaccgccctttttagctcagactcggaatacttgtcgttgagct 461
            | || || || | || |||  | |||||||| ||||| || |||||||| || ||||| |
Sbjct: 1083 aagccagaccaaccaacactactctttttagttcagattcagaatacttatcattgagtt 1024

                                                                        
Query: 462  ttgagtctgcgatctcatcgtatctaccctctttcgccaacgggagcatccagttccgga 521
            | |||||  | || ||||||||||| || ||||| ||||| ||||||| |||||| || |
Sbjct: 1023 tggagtccacaatttcatcgtatctgccatcttttgccaaagggagcacccagtttcgaa 964

                                                                        
Query: 522  ccccgagcattttttgggagcctgatttttctactggctttctcccactagtaagctcca 581
            ||||   ||||||    ||||| ||  |||| |||||  ||||||||||||  |||||||
Sbjct: 963  ccccacacattttggcagagcccgacctttccactggtcttctcccactagatagctcca 904

                                                                        
Query: 582  gaagtattatgccaaagctgtagacatcacaacctgttgtaggcttgccaaacatgacgt 641
              ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||
Sbjct: 903  acagtattatgccaaagctgtagacatcacaacctattgtaggtttgccaaacataatgt 844

                      
Query: 642  actcaggagc 651
            ||||||||||
Sbjct: 843  actcaggagc 834
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  194 bits (98), Expect = 3e-46
 Identities = 302/370 (81%)
 Strand = Plus / Minus

                                                                           
Query: 282     tcgagtctggcctaaacagctcttccttttcaagcctcaggagcatctctttcgattcgc 341
               ||||||||||||| ||||  || || |||||||||||    ||||||||||| ||||| |
Sbjct: 3362067 tcgagtctggcctgaacaattcatcattttcaagcctggaaagcatctctttagattcac 3362008

                                                                           
Query: 342     ctttcagcagggacacaacctcaagcatcgttggtctcttttccggttctctgtgcgtgc 401
               |||||||||  || ||||| || ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 3362007 ctttcagcatcgatacaacttcgagcattgtcggtctcttttcaggttctctgtgtgtgc 3361948

                                                                           
Query: 402     acgctaggccgatcagcaccgccctttttagctcagactcggaatacttgtcgttgagct 461
               | || || || | || |||  | |||||||| ||||| || |||||||| || ||||| |
Sbjct: 3361947 aagccagaccaaccaacactactctttttagttcagattcagaatacttatcattgagtt 3361888

                                                                           
Query: 462     ttgagtctgcgatctcatcgtatctaccctctttcgccaacgggagcatccagttccgga 521
               | |||||  | || ||||||||||| || ||||| ||||| ||||||| |||||| || |
Sbjct: 3361887 tggagtccacaatttcatcgtatctgccatcttttgccaaagggagcacccagtttcgaa 3361828

                                                                           
Query: 522     ccccgagcattttttgggagcctgatttttctactggctttctcccactagtaagctcca 581
               ||||   ||||||    ||||| ||  |||| |||||  ||||||||||||  |||||||
Sbjct: 3361827 ccccacacattttggcagagcccgacctttccactggtcttctcccactagatagctcca 3361768

                                                                           
Query: 582     gaagtattatgccaaagctgtagacatcacaacctgttgtaggcttgccaaacatgacgt 641
                 ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||
Sbjct: 3361767 acagtattatgccaaagctgtagacatcacaacctattgtaggtttgccaaacataatgt 3361708

                         
Query: 642     actcaggagc 651
               ||||||||||
Sbjct: 3361707 actcaggagc 3361698
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>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0015I14
          Length = 150650

 Score =  194 bits (98), Expect = 3e-46
 Identities = 302/370 (81%)
 Strand = Plus / Minus

                                                                          
Query: 282    tcgagtctggcctaaacagctcttccttttcaagcctcaggagcatctctttcgattcgc 341
              ||||||||||||| ||||  || || |||||||||||    ||||||||||| ||||| |
Sbjct: 149430 tcgagtctggcctgaacaattcatcattttcaagcctggaaagcatctctttagattcac 149371

                                                                          
Query: 342    ctttcagcagggacacaacctcaagcatcgttggtctcttttccggttctctgtgcgtgc 401
              |||||||||  || ||||| || ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 149370 ctttcagcatcgatacaacttcgagcattgtcggtctcttttcaggttctctgtgtgtgc 149311

                                                                          
Query: 402    acgctaggccgatcagcaccgccctttttagctcagactcggaatacttgtcgttgagct 461
              | || || || | || |||  | |||||||| ||||| || |||||||| || ||||| |
Sbjct: 149310 aagccagaccaaccaacactactctttttagttcagattcagaatacttatcattgagtt 149251

                                                                          
Query: 462    ttgagtctgcgatctcatcgtatctaccctctttcgccaacgggagcatccagttccgga 521
              | |||||  | || ||||||||||| || ||||| ||||| ||||||| |||||| || |
Sbjct: 149250 tggagtccacaatttcatcgtatctgccatcttttgccaaagggagcacccagtttcgaa 149191

                                                                          
Query: 522    ccccgagcattttttgggagcctgatttttctactggctttctcccactagtaagctcca 581
              ||||   ||||||    ||||| ||  |||| |||||  ||||||||||||  |||||||
Sbjct: 149190 ccccacacattttggcagagcccgacctttccactggtcttctcccactagatagctcca 149131

                                                                          
Query: 582    gaagtattatgccaaagctgtagacatcacaacctgttgtaggcttgccaaacatgacgt 641
                ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||
Sbjct: 149130 acagtattatgccaaagctgtagacatcacaacctattgtaggtttgccaaacataatgt 149071

                        
Query: 642    actcaggagc 651
              ||||||||||
Sbjct: 149070 actcaggagc 149061
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
             P0680A03
          Length = 156054

 Score =  194 bits (98), Expect = 3e-46
 Identities = 302/370 (81%)
 Strand = Plus / Minus

                                                                         
Query: 282   tcgagtctggcctaaacagctcttccttttcaagcctcaggagcatctctttcgattcgc 341
             ||||||||||||| ||||  || || |||||||||||    ||||||||||| ||||| |
Sbjct: 53621 tcgagtctggcctgaacaattcatcattttcaagcctggaaagcatctctttagattcac 53562

                                                                         
Query: 342   ctttcagcagggacacaacctcaagcatcgttggtctcttttccggttctctgtgcgtgc 401
             |||||||||  || ||||| || ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 53561 ctttcagcatcgatacaacttcgagcattgtcggtctcttttcaggttctctgtgtgtgc 53502

                                                                         
Query: 402   acgctaggccgatcagcaccgccctttttagctcagactcggaatacttgtcgttgagct 461
             | || || || | || |||  | |||||||| ||||| || |||||||| || ||||| |
Sbjct: 53501 aagccagaccaaccaacactactctttttagttcagattcagaatacttatcattgagtt 53442

                                                                         
Query: 462   ttgagtctgcgatctcatcgtatctaccctctttcgccaacgggagcatccagttccgga 521
             | |||||  | || ||||||||||| || ||||| ||||| ||||||| |||||| || |
Sbjct: 53441 tggagtccacaatttcatcgtatctgccatcttttgccaaagggagcacccagtttcgaa 53382

                                                                         
Query: 522   ccccgagcattttttgggagcctgatttttctactggctttctcccactagtaagctcca 581
             ||||   ||||||    ||||| ||  |||| |||||  ||||||||||||  |||||||
Sbjct: 53381 ccccacacattttggcagagcccgacctttccactggtcttctcccactagatagctcca 53322

                                                                         
Query: 582   gaagtattatgccaaagctgtagacatcacaacctgttgtaggcttgccaaacatgacgt 641
               ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||
Sbjct: 53321 acagtattatgccaaagctgtagacatcacaacctattgtaggtttgccaaacataatgt 53262

                       
Query: 642   actcaggagc 651
             ||||||||||
Sbjct: 53261 actcaggagc 53252
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>dbj|AK058497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E12, full
            insert sequence
          Length = 1651

 Score =  194 bits (98), Expect = 3e-46
 Identities = 302/370 (81%)
 Strand = Plus / Minus

                                                                        
Query: 282  tcgagtctggcctaaacagctcttccttttcaagcctcaggagcatctctttcgattcgc 341
            ||||||||||||| ||||  || || |||||||||||    ||||||||||| ||||| |
Sbjct: 1203 tcgagtctggcctgaacaattcatcattttcaagcctggaaagcatctctttagattcac 1144

                                                                        
Query: 342  ctttcagcagggacacaacctcaagcatcgttggtctcttttccggttctctgtgcgtgc 401
            |||||||||  || ||||| || ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 1143 ctttcagcatcgatacaacttcgagcattgtcggtctcttttcaggttctctgtgtgtgc 1084

                                                                        
Query: 402  acgctaggccgatcagcaccgccctttttagctcagactcggaatacttgtcgttgagct 461
            | || || || | || |||  | |||||||| ||||| || |||||||| || ||||| |
Sbjct: 1083 aagccagaccaaccaacactactctttttagttcagattcagaatacttatcattgagtt 1024

                                                                        
Query: 462  ttgagtctgcgatctcatcgtatctaccctctttcgccaacgggagcatccagttccgga 521
            | |||||  | || ||||||||||| || ||||| ||||| ||||||| |||||| || |
Sbjct: 1023 tggagtccacaatttcatcgtatctgccatcttttgccaaagggagcacccagtttcgaa 964

                                                                        
Query: 522  ccccgagcattttttgggagcctgatttttctactggctttctcccactagtaagctcca 581
            ||||   ||||||    ||||| ||  |||| |||||  ||||||||||||  |||||||
Sbjct: 963  ccccacacattttggcagagcccgacctttccactggtcttctcccactagatagctcca 904

                                                                        
Query: 582  gaagtattatgccaaagctgtagacatcacaacctgttgtaggcttgccaaacatgacgt 641
              ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||
Sbjct: 903  acagtattatgccaaagctgtagacatcacaacctattgtaggtttgccaaacataatgt 844

                      
Query: 642  actcaggagc 651
            ||||||||||
Sbjct: 843  actcaggagc 834
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>ref|XM_617408.2| PREDICTED: Bos taurus similar to Neuronal acetylcholine receptor
            protein, alpha-4 subunit precursor (LOC537251), mRNA
          Length = 1803

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 190  accaacccatcaagccccagccagccc 216
            |||| ||||||||||||||||||||||
Sbjct: 1142 accagcccatcaagccccagccagccc 1168
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>ref|XM_471524.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2322

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 590  atgccaaagctgtagacatcac 611
            ||||||||||||||||||||||
Sbjct: 1919 atgccaaagctgtagacatcac 1898
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 590      atgccaaagctgtagacatcac 611
                ||||||||||||||||||||||
Sbjct: 11622542 atgccaaagctgtagacatcac 11622563
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>dbj|AK106614.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H08, full
            insert sequence
          Length = 2651

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 590  atgccaaagctgtagacatcac 611
            ||||||||||||||||||||||
Sbjct: 1924 atgccaaagctgtagacatcac 1903
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>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
              complete sequence
          Length = 164911

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 590    atgccaaagctgtagacatcac 611
              ||||||||||||||||||||||
Sbjct: 105552 atgccaaagctgtagacatcac 105573
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>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    tcatcataaataacaaaccaatcct 101
             |||||||||||| ||||||||||||
Sbjct: 28720 tcatcataaatagcaaaccaatcct 28744
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>ref|XM_478765.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2070

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 590  atgccaaagctgtagacatca 610
            |||||||||||||||||||||
Sbjct: 1613 atgccaaagctgtagacatca 1593
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>gb|BT018911.1| Zea mays clone EL01T0403D10.d mRNA sequence
          Length = 1980

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 590  atgccaaagctgtagacatca 610
            |||||||||||||||||||||
Sbjct: 1296 atgccaaagctgtagacatca 1276
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>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 77     tcatcataaataacaaaccaatcct 101
              |||||||||||| ||||||||||||
Sbjct: 428822 tcatcataaatagcaaaccaatcct 428798
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>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 77     tcatcataaataacaaaccaatcct 101
              |||||||||||| ||||||||||||
Sbjct: 230233 tcatcataaatagcaaaccaatcct 230209
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>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 77     tcatcataaataacaaaccaatcct 101
              |||||||||||| ||||||||||||
Sbjct: 347217 tcatcataaatagcaaaccaatcct 347193
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>gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence
          Length = 134798

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     aaaaagcactttctataaaag 28
             |||||||||||||||||||||
Sbjct: 59948 aaaaagcactttctataaaag 59928
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>emb|AL356318.7| Human DNA sequence from clone RP11-161E22 on chromosome 9 Contains part
              of the TRPM3 gene for transient receptor potential cation
              channel subfamily M, member 3 (MLSN2, LTRPC3, FLJ11726) and
              a pseudogene similar to part of CDC91 cell division cycle
              91-like 1 (S. cerevisiae) (CDC91L1), complete sequence
          Length = 141339

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 293    ctaaacagctcttccttttca 313
              |||||||||||||||||||||
Sbjct: 115369 ctaaacagctcttccttttca 115389
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 590      atgccaaagctgtagacatca 610
                |||||||||||||||||||||
Sbjct: 22869623 atgccaaagctgtagacatca 22869643
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>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1019_E02
          Length = 121607

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 590   atgccaaagctgtagacatca 610
             |||||||||||||||||||||
Sbjct: 62890 atgccaaagctgtagacatca 62910
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>gb|AY104365.1| Zea mays PCO135860 mRNA sequence
          Length = 1277

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 590 atgccaaagctgtagacatca 610
           |||||||||||||||||||||
Sbjct: 625 atgccaaagctgtagacatca 605
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>dbj|AB057536.1| Rana catesbeiana mRNA for natriuretic-peptide receptor A, complete
            cds
          Length = 4347

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 577  ctccagaagtattatgccaaagctgtaga 605
            |||| ||||||| ||||||||||||||||
Sbjct: 2563 ctcctgaagtataatgccaaagctgtaga 2535
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>gb|DQ013804.1| Phyllostachys praecox RLK1 mRNA, partial cds
          Length = 2776

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 592  gccaaagctgtagacatcac 611
            ||||||||||||||||||||
Sbjct: 1992 gccaaagctgtagacatcac 1973
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>gb|AC113957.8| Mus musculus chromosome 15, clone RP23-452M1, complete sequence
          Length = 168824

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 27    agccaactcacctctctacatctccccc 54
             ||||||||||||||||| || |||||||
Sbjct: 66578 agccaactcacctctcttcaactccccc 66605
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>emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chromosome 9p22.3-24.1
              Contains part of a variant of the PTPRD gene for protein
              tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
              complete sequence
          Length = 149087

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    tttctactggctttctccca 568
              ||||||||||||||||||||
Sbjct: 132900 tttctactggctttctccca 132919
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>gb|AC163438.3| Mus musculus chromosome 8, clone RP23-278M23, complete sequence
          Length = 186102

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    ctcaagcatcgttggtctct 380
              ||||||||||||||||||||
Sbjct: 147459 ctcaagcatcgttggtctct 147478
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>emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 in linkage group 16,
            complete sequence
          Length = 161708

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 582  gaagtattatgccaaagctgtagacatc 609
            ||||||| |||||||| |||||||||||
Sbjct: 3580 gaagtatgatgccaaaactgtagacatc 3553
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>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence
          Length = 171721

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   caaagctgtagacatcacaa 613
             ||||||||||||||||||||
Sbjct: 89045 caaagctgtagacatcacaa 89026
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>ref|XM_678571.1| PREDICTED: Danio rerio similar to natriuretic peptide receptor-A
           (LOC555911), mRNA
          Length = 1878

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 582 gaagtattatgccaaagctgtagacatc 609
           ||||||| |||||||| |||||||||||
Sbjct: 874 gaagtatgatgccaaaactgtagacatc 847
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>gb|AC119807.11| Mus musculus chromosome 8, clone RP23-167I14, complete sequence
          Length = 203248

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ctcaagcatcgttggtctct 380
              ||||||||||||||||||||
Sbjct: 173717 ctcaagcatcgttggtctct 173698
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>gb|AC016879.6| Homo sapiens chromosome 8, clone RP11-97P19, complete sequence
          Length = 182556

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 594 caaagctgtagacatcacaa 613
           ||||||||||||||||||||
Sbjct: 430 caaagctgtagacatcacaa 449
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 590    atgccaaagctgtagacatc 609
              ||||||||||||||||||||
Sbjct: 867750 atgccaaagctgtagacatc 867731



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 590    atgccaaagctgtagacatc 609
              ||||||||||||||||||||
Sbjct: 772229 atgccaaagctgtagacatc 772210
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>emb|BX824799.1|CNS0A6RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH73ZB01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 589 tatgccaaagctgtagacatcaca 612
           |||||||||||||| |||||||||
Sbjct: 624 tatgccaaagctgtggacatcaca 601
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>gb|AC007098.4| Homo sapiens BAC clone RP11-443F16 from 2, complete sequence
          Length = 157650

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     aaataacaaaccaatcctatacat 107
              |||||||||||||| |||||||||
Sbjct: 100906 aaataacaaaccaagcctatacat 100929
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>gb|AC078864.20| Homo sapiens 12 PAC RP1-288H2 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 44199

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    agatcatcataaataacaaa 93
             ||||||||||||||||||||
Sbjct: 18848 agatcatcataaataacaaa 18867
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>gb|AF238474.1|AF238474 Oryza sativa receptor-like kinase (RLG16) gene, complete cds
          Length = 4500

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  atgccaaagctgtagacatc 609
            ||||||||||||||||||||
Sbjct: 3330 atgccaaagctgtagacatc 3311
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>gb|AF237568.1|AF237568 Oryza sativa receptor-like protein kinase (RLG2) gene, complete cds
          Length = 4000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  atgccaaagctgtagacatc 609
            ||||||||||||||||||||
Sbjct: 3166 atgccaaagctgtagacatc 3147
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>dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0698G03
          Length = 147857

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  atgccaaagctgtagacatc 609
            ||||||||||||||||||||
Sbjct: 3195 atgccaaagctgtagacatc 3176
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>dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0463F06
          Length = 144322

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   atgccaaagctgtagacatc 609
             ||||||||||||||||||||
Sbjct: 90424 atgccaaagctgtagacatc 90405
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>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1212_B09
          Length = 130728

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   atgccaaagctgtagacatc 609
             ||||||||||||||||||||
Sbjct: 49429 atgccaaagctgtagacatc 49410
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>dbj|AK120121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025P07, full
            insert sequence
          Length = 3392

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  atgccaaagctgtagacatc 609
            ||||||||||||||||||||
Sbjct: 2792 atgccaaagctgtagacatc 2773
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>emb|AL163193.5|HS73E6 Homo sapiens chromosome 9 BAC RP11-73E6, complete sequence
          Length = 175931

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   gtacaccaacccatcaagcc 205
             ||||||||||||||||||||
Sbjct: 43491 gtacaccaacccatcaagcc 43510
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>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 16,
             complete sequence
          Length = 205755

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 582   gaagtattatgccaaagctgtagacatc 609
             ||||||| |||||||| |||||||||||
Sbjct: 43278 gaagtatgatgccaaaactgtagacatc 43251
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>gb|AY105609.1| Zea mays PCO130861 mRNA sequence
          Length = 773

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 589 tatgccaaagctgtagacatcaca 612
           ||||||||| ||||||||||||||
Sbjct: 626 tatgccaaaactgtagacatcaca 603
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>gb|AF164021.1|AF164021 Oryza sativa clone GRLG4 receptor kinase gene, complete cds
          Length = 5112

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  atgccaaagctgtagacatc 609
            ||||||||||||||||||||
Sbjct: 4224 atgccaaagctgtagacatc 4205
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>gb|AF100764.1|AF100764 Oryza sativa OS8LRK pseudogene sequence
          Length = 3590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  atgccaaagctgtagacatc 609
            ||||||||||||||||||||
Sbjct: 3166 atgccaaagctgtagacatc 3147
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>gb|AC161468.2| Gallus gallus BAC clone CH261-94J19 from chromosome unknown, complete
              sequence
          Length = 238361

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    cggttctctgtgcgtgcacg 404
              ||||||||||||||||||||
Sbjct: 213800 cggttctctgtgcgtgcacg 213819
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>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete
              sequence
          Length = 248284

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    cggttctctgtgcgtgcacg 404
              ||||||||||||||||||||
Sbjct: 176430 cggttctctgtgcgtgcacg 176411
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>gb|AF044489.1|AF044489 Oryza sativa receptor-like protein kinase (drpk1) mRNA, partial cds
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 590 atgccaaagctgtagacatc 609
           ||||||||||||||||||||
Sbjct: 925 atgccaaagctgtagacatc 906
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>emb|AL513498.2|HS336O12 Homo sapiens chromosome 9 BAC RP11-336O12, complete sequence
          Length = 155780

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    gtacaccaacccatcaagcc 205
              ||||||||||||||||||||
Sbjct: 142985 gtacaccaacccatcaagcc 143004


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,942,327
Number of Sequences: 3902068
Number of extensions: 4942327
Number of successful extensions: 85536
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85317
Number of HSP's gapped (non-prelim): 209
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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