ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17m22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 726 0.0
2gb|AY103537.1| Zea mays PCO098403 mRNA sequence 496 e-137
3gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence 492 e-136
4gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence 492 e-136
5gb|BT016887.1| Zea mays clone Contig720 mRNA sequence 472 e-130
6gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence 472 e-130
7dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
8dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
9dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
10dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 9... 424 e-115
11gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 268 2e-68
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
13dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
14dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
15gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds 96 2e-16
16ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP bindin... 80 1e-11
17ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP bindin... 80 1e-11
18emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BA... 80 1e-11
19emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BA... 80 1e-11
20emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, ... 80 1e-11
21gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, com... 80 1e-11
22gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, com... 80 1e-11
23dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, comp... 80 1e-11
24gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC ... 80 1e-11
25dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, comp... 80 1e-11
26gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq... 62 2e-06
27gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H... 50 0.009
28gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A... 50 0.009
29emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat... 50 0.009
30gb|AY103538.1| Zea mays PCO150589 mRNA sequence 48 0.036
31emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8,... 48 0.036
32gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta... 46 0.14
33gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRN... 46 0.14
34gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock pr... 44 0.56
35gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA 44 0.56
36dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 44 0.56
37ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1)... 44 0.56
38gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock ... 44 0.56
39gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related pro... 44 0.56
40gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA 44 0.56
41gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence 42 2.2
42gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosom... 42 2.2
43gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 42 2.2
44emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 42 2.2
45gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 42 2.2
46gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 2.2
47gb|AY109427.1| Zea mays CL1264_2 mRNA sequence 42 2.2
48gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end 42 2.2
49gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome... 42 2.2
50gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 m... 42 2.2
51gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 8... 42 2.2
52gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 8.7
53ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho ... 40 8.7
54ref|XM_646103.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.7
55ref|XM_646496.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.7
56emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chr... 40 8.7
57gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 40 8.7
58gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 hea... 40 8.7
59gb|AF313474.1| Entamoeba histolytica retrotransposon-like elemen... 40 8.7
60gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, comple... 40 8.7
61gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FK... 40 8.7
62dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.7
63ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (... 40 8.7
64gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequ... 40 8.7
65emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 8.7
66dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.7
67gb|AC145909.3| Gallus gallus BAC clone CH261-43H20 from chromoso... 40 8.7
68dbj|AB022081.1| Brassica rapa DNA for ORF-c, complete cds 40 8.7
69dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, comp... 40 8.7 
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  726 bits (366), Expect = 0.0
 Identities = 369/370 (99%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 2252

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 2192

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 2132

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2131 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcca 2072

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 2012

                      
Query: 630  tcaatgccct 639
            ||||||||||
Sbjct: 2011 tcaatgccct 2002



 Score =  369 bits (186), Expect = 8e-99
 Identities = 186/186 (100%)
 Strand = Plus / Minus

                                                                        
Query: 8    ggtacagtagtacattacacggacaaaaccccccgtatcacgatcgatgattaatcgtct 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2633 ggtacagtagtacattacacggacaaaaccccccgtatcacgatcgatgattaatcgtct 2574

                                                                        
Query: 68   tccgcgcggtaaaaatggacgtccctcaaaaccatcacatttccagtccaacatttcttt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 tccgcgcggtaaaaatggacgtccctcaaaaccatcacatttccagtccaacatttcttt 2514

                                                                        
Query: 128  ctaatgaaatgaaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactg 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2513 ctaatgaaatgaaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactg 2454

                  
Query: 188  ctcgtg 193
            ||||||
Sbjct: 2453 ctcgtg 2448
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>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score =  496 bits (250), Expect = e-137
 Identities = 334/362 (92%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 2283

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
            |||||||||||||||||  ||||||| ||  |||||||||||||||||||||||||||||
Sbjct: 2282 ctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctcc 2223

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2222 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 2163

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||||||| ||||||||||||||| |||||||||||||||||||||||||  ||||| || 
Sbjct: 2162 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 2103

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            |||||||||||||| || || |||||||||| |||||||||||||||||||||||| |||
Sbjct: 2102 tacttggaggtgacgacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgag 2043

              
Query: 630  tc 631
            ||
Sbjct: 2042 tc 2041



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  actacagctcgtccttgtcg 182
            ||||||||||||||||||||
Sbjct: 2503 actacagctcgtccttgtcg 2484
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>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence
          Length = 1546

 Score =  492 bits (248), Expect = e-136
 Identities = 329/356 (92%)
 Strand = Plus / Minus

                                                                        
Query: 276  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 335
            |||||||||||||||||||||| |||||||||||||  ||||||||| ||||| || |||
Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181

                                                                        
Query: 336  ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 395
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1180 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1121

                                                                        
Query: 396  gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 455
            || ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1120 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1061

                                                                        
Query: 456  atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 515
            |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1060 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 1001

                                                                        
Query: 516  gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 575
            | ||||||||||||||| |||||||||||||||||||||||||  ||||| || ||||||
Sbjct: 1000 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 941

                                                                    
Query: 576  gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagagtc 631
            ||||||||||| || |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 940  gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgagtc 885
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>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence
          Length = 1544

 Score =  492 bits (248), Expect = e-136
 Identities = 329/356 (92%)
 Strand = Plus / Minus

                                                                        
Query: 276  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 335
            |||||||||||||||||||||| |||||||||||||  ||||||||| ||||| || |||
Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167

                                                                        
Query: 336  ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 395
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1166 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1107

                                                                        
Query: 396  gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 455
            || ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1106 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1047

                                                                        
Query: 456  atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 515
            |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1046 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 987

                                                                        
Query: 516  gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 575
            | ||||||||||||||| |||||||||||||||||||||||||  ||||| || ||||||
Sbjct: 986  gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 927

                                                                    
Query: 576  gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagagtc 631
            ||||||||||| || |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 926  gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgagtc 871
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>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence
          Length = 719

 Score =  472 bits (238), Expect = e-130
 Identities = 331/362 (91%)
 Strand = Plus / Plus

                                                                       
Query: 270 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
           ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398

                                                                       
Query: 330 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
           || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 399 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 458

                                                                       
Query: 390 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
           |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 459 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 518

                                                                       
Query: 450 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
           |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 519 ttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctgc 578

                                                                       
Query: 510 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
           ||||||| ||||||||| ||||| |||||||||||||||||||||||||  ||||| || 
Sbjct: 579 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 638

                                                                       
Query: 570 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
           |||||||||||||| || ||  ||||||||| |||||||||| |||||| |||||| |||
Sbjct: 639 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccgag 698

             
Query: 630 tc 631
           ||
Sbjct: 699 tc 700
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>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence
          Length = 2511

 Score =  472 bits (238), Expect = e-130
 Identities = 331/362 (91%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            || ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccagc 2053

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
            |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2052 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 1993

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1992 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 1933

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||||||| ||||||||| ||||| |||||||||||||||||||||||||  ||||| || 
Sbjct: 1932 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 1873

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            |||||||||||||| || ||  ||||||||| |||||||||| |||||| |||||| |||
Sbjct: 1872 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccgag 1813

              
Query: 630  tc 631
            ||
Sbjct: 1812 tc 1811
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>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full
            insert sequence
          Length = 2708

 Score =  432 bits (218), Expect = e-118
 Identities = 326/362 (90%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 2297

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 2296 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2237

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2236 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2177

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  ||||| || 
Sbjct: 2176 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2117

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            |||||||| || |||||||| |||||||||| |  ||||||||||||||||||||| |||
Sbjct: 2116 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 2057

              
Query: 630  tc 631
            ||
Sbjct: 2056 tc 2055



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 78   aaaaatggacgtccctcaaaaccatcacattt 109
            ||||||||||||||||| ||||||||||||||
Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577
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>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full
            insert sequence
          Length = 2026

 Score =  432 bits (218), Expect = e-118
 Identities = 326/362 (90%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1619

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1618 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1559

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1558 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1499

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  ||||| || 
Sbjct: 1498 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 1439

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            |||||||| || |||||||| |||||||||| |  ||||||||||||||||||||| |||
Sbjct: 1438 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 1379

              
Query: 630  tc 631
            ||
Sbjct: 1378 tc 1377



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 78   aaaaatggacgtccctcaaaaccatcacattt 109
            ||||||||||||||||| ||||||||||||||
Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899
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>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
            insert sequence
          Length = 1944

 Score =  424 bits (214), Expect = e-115
 Identities = 325/362 (89%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1537

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1536 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1477

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1476 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1417

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||||| || ||||| |||||||||| |||||||||||||||| ||||||  ||||| || 
Sbjct: 1416 ttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccacccg 1357

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            |||||||| || |||||||| |||||||||| |  ||||||||||||||||||||| |||
Sbjct: 1356 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 1297

              
Query: 630  tc 631
            ||
Sbjct: 1296 tc 1295



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 78   aaaaatggacgtccctcaaaaccatcacattt 109
            ||||||||||||||||| ||||||||||||||
Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817
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>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds
          Length = 2731

 Score =  424 bits (214), Expect = e-115
 Identities = 325/362 (89%)
 Strand = Plus / Minus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||  | || 
Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccagc 2291

                                                                        
Query: 390  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 449
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 2290 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2231

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2230 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2171

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  ||||| || 
Sbjct: 2170 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2111

                                                                        
Query: 570  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 629
            |||||||| || |||||||| |||||||||| |  ||||||||||||||||||||| |||
Sbjct: 2110 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 2051

              
Query: 630  tc 631
            ||
Sbjct: 2050 tc 2049



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 78   aaaaatggacgtccctcaaaaccatcacattt 109
            ||||||||||||||||| ||||||||||||||
Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Plus

                                                                         
Query: 417   tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 476
             ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 9854  tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913

                                                                         
Query: 477   tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 536
             || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 9914  tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973

                                                                         
Query: 537   tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 596
             ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 9974  tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 10033

                                                
Query: 597   gtgttgtgcagccggttgctgatcttcacagagtc 631
             |||| |  ||||||||||||||||||||| |||||
Sbjct: 10034 gtgtcgctcagccggttgctgatcttcaccgagtc 10068



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 9720

                                      
Query: 390  ctcgccgtctgcttcaggccctcgct 415
             ||||||||||||||| || ||||||
Sbjct: 9721 ttcgccgtctgcttcaagctctcgct 9746



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 78   aaaaatggacgtccctcaaaaccatcacattt 109
            ||||||||||||||||| ||||||||||||||
Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Plus

                                                                            
Query: 417      tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 476
                ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207

                                                                            
Query: 477      tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 536
                || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267

                                                                            
Query: 537      tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 596
                ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 29929327

                                                   
Query: 597      gtgttgtgcagccggttgctgatcttcacagagtc 631
                |||| |  ||||||||||||||||||||| |||||
Sbjct: 29929328 gtgtcgctcagccggttgctgatcttcaccgagtc 29929362



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                            
Query: 270      acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
                ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954

                                                                            
Query: 330      aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
                ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 29929014

                                          
Query: 390      ctcgccgtctgcttcaggccctcgct 415
                 ||||||||||||||| || ||||||
Sbjct: 29929015 ttcgccgtctgcttcaagctctcgct 29929040



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 78       aaaaatggacgtccctcaaaaccatcacattt 109
                ||||||||||||||||| ||||||||||||||
Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0541C02
          Length = 150660

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Plus

                                                                        
Query: 417  tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 476
            ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355

                                                                        
Query: 477  tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 536
            || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415

                                                                        
Query: 537  tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 596
            ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 5475

                                               
Query: 597  gtgttgtgcagccggttgctgatcttcacagagtc 631
            |||| |  ||||||||||||||||||||| |||||
Sbjct: 5476 gtgtcgctcagccggttgctgatcttcaccgagtc 5510



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                        
Query: 270  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102

                                                                        
Query: 330  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 5162

                                      
Query: 390  ctcgccgtctgcttcaggccctcgct 415
             ||||||||||||||| || ||||||
Sbjct: 5163 ttcgccgtctgcttcaagctctcgct 5188



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 78   aaaaatggacgtccctcaaaaccatcacattt 109
            ||||||||||||||||| ||||||||||||||
Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Plus

                                                                          
Query: 417    tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 476
              ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720

                                                                          
Query: 477    tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 536
              || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780

                                                                          
Query: 537    tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 596
              ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 124840

                                                 
Query: 597    gtgttgtgcagccggttgctgatcttcacagagtc 631
              |||| |  ||||||||||||||||||||| |||||
Sbjct: 124841 gtgtcgctcagccggttgctgatcttcaccgagtc 124875



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                          
Query: 270    acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 329
              ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467

                                                                          
Query: 330    aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 389
              ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 124527

                                        
Query: 390    ctcgccgtctgcttcaggccctcgct 415
               ||||||||||||||| || ||||||
Sbjct: 124528 ttcgccgtctgcttcaagctctcgct 124553



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 78     aaaaatggacgtccctcaaaaccatcacattt 109
              ||||||||||||||||| ||||||||||||||
Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247
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>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds
          Length = 2947

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 135/164 (82%)
 Strand = Plus / Minus

                                                                        
Query: 468  gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 527
            ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || 
Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076

                                                                        
Query: 528  gtctgtgcctgcatgatcttctccatgttggaactccatccatacttggaggtgaccacc 587
            ||||| | |||||| |||||||||||||| | |||||| ||||| || || ||||| || 
Sbjct: 2075 gtctgagactgcataatcttctccatgtttgcactccaaccatatttcgatgtgacaaca 2016

                                                        
Query: 588  acacagggggtgttgtgcagccggttgctgatcttcacagagtc 631
            || || || ||||| | || ||||||||| |||||||| |||||
Sbjct: 2015 acgcaaggagtgttatccaaccggttgctaatcttcacggagtc 1972
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>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein
            binding AT4G24190 (SHD) transcript variant AT4G24190.1
            mRNA, complete cds
          Length = 2707

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 2087 aacttgga 2080
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>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein
            binding AT4G24190 (SHD) transcript variant AT4G24190.2
            mRNA, complete cds
          Length = 2707

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 2087 aacttgga 2080
to top
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial
             sequence (ESSA project)
          Length = 77567

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                         
Query: 450   ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
             |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776

                                                                         
Query: 510   ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
             ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 76836

                     
Query: 570   tacttgga 577
              |||||||
Sbjct: 76837 aacttgga 76844
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>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project)
          Length = 108459

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 3474

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 3475 aacttgga 3482
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>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
          Length = 198402

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                         
Query: 450   ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
             |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071

                                                                         
Query: 510   ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
             ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 20131

                     
Query: 570   tacttgga 577
              |||||||
Sbjct: 20132 aacttgga 20139
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>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds
          Length = 2702

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2082

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 2081 aacttgga 2074
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>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2034

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 2033 aacttgga 2026
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>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds
          Length = 2674

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2074

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 2073 aacttgga 2066
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>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence,
           complete sequence
          Length = 116156

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
           |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792

                                                                       
Query: 510 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
           ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 732

                   
Query: 570 tacttgga 577
            |||||||
Sbjct: 731 aacttgga 724
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>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds
          Length = 6679

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 450  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 509
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077

                                                                        
Query: 510  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 569
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 5017

                    
Query: 570  tacttgga 577
             |||||||
Sbjct: 5016 aacttgga 5009
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>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 441   cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 500
             ||||| ||||||||||| ||||| |  || |||||||| || ||||||||||||||||||
Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063

                        
Query: 501   tacgcctgctt 511
             || || |||||
Sbjct: 80062 tatgcttgctt 80052
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>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat
           shock protein (hsp83) mRNA, partial cds
          Length = 564

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 444 agctccttgatgatggggtgccgggggttgatctcca 480
           |||||||||||||||||||| | |||||||| |||||
Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100
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>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat
           shock protein (hsp83) mRNA, partial cds
          Length = 597

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 444 agctccttgatgatggggtgccgggggttgatctcca 480
           |||||||||||||||||||| | |||||||| |||||
Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477
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>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and
            hsp83-2 gene for heat shock protein 83-2
          Length = 3744

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 444  agctccttgatgatggggtgccgggggttgatctcca 480
            |||||||||||||||||||| | |||||||| |||||
Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878
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>gb|AY103538.1| Zea mays PCO150589 mRNA sequence
          Length = 2534

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 511  tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 558
            |||||| ||||  ||||| |||||||| ||||||| ||||||||||||
Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttgg 1921
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>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE
          Length = 165916

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 530   ctgtgcctgcatgatcttctccatgttggaactccatccatact 573
             |||||||| ||||||| |||||||||||| | |||| |||||||
Sbjct: 33488 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 33445



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 530   ctgtgcctgcatgatcttctccatgttggaactccatccatact 573
             |||||||| ||||||| |||||||||||| | |||| |||||||
Sbjct: 22847 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 22804
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>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete
            cds
          Length = 2625

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 524  cagggtctgtgcctgcatgatcttctccatgttgg 558
            ||||| |||||||| ||||||| ||||||||||||
Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875
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>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds
          Length = 2397

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 511  tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccat 570
            |||||| ||||  ||||| ||| |||| ||||||| |||||||||||| | |||| ||||
Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttggcagtccagccat 1839

               
Query: 571  act 573
            |||
Sbjct: 1838 act 1836
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>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene,
            partial cds
          Length = 2391

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 443  gagctccttgatgatggggtgccgggggttgatctcca 480
            |||||||||||||||||||||   |||||||| |||||
Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117
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>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA
          Length = 1210

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 444 agctccttgatgatggggtgccgggggttgatctccag 481
           |||| ||||||||||||||||   ||||||||||||||
Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 120     atttctttctaatgaaatgaaa 141
               ||||||||||||||||||||||
Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148
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>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA
          Length = 2478

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 444  agctccttgatgatggggtgccgggggttgatctccag 481
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160
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>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90)
            gene, partial cds
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 444  agctccttgatgatggggtgccgggggttgatctccag 481
            |||||||||||||||| ||| |  ||||||||||||||
Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703
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>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete
            cds
          Length = 2162

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 444  agctccttgatgatggggtgccgggggttgatctccag 481
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963
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>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA
          Length = 2475

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 444  agctccttgatgatggggtgccgggggttgatctccag 481
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156
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>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence
          Length = 2179

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 530  ctgtgcctgcatgatcttctccatgttgg 558
            |||||||| ||||||| ||||||||||||
Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676
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>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence
          Length = 241834

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 556    tggaactccatccatacttgg 576
              |||||||||||||||||||||
Sbjct: 152955 tggaactccatccatacttgg 152935
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 128     ctaatgaaatgaaagctaaat 148
               |||||||||||||||||||||
Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242
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>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    agtccttggggtccggcaggt 351
              |||||||||||||||||||||
Sbjct: 266763 agtccttggggtccggcaggt 266743
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>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    ttctaatgaaatgaaagctaa 146
              |||||||||||||||||||||
Sbjct: 112594 ttctaatgaaatgaaagctaa 112614
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>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     aaccatcacatttccagtcca 117
              |||||||||||||||||||||
Sbjct: 132650 aaccatcacatttccagtcca 132630
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>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence
          Length = 1267

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 530 ctgtgcctgcatgatcttctccatgttgg 558
           |||||||| ||||||| ||||||||||||
Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659
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>gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end
          Length = 1496

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 408 ccctcgctgtcgctgtcctgg 428
           |||||||||||||||||||||
Sbjct: 349 ccctcgctgtcgctgtcctgg 329
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>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence
          Length = 199499

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 556   tggaactccatccatacttgg 576
             |||||||||||||||||||||
Sbjct: 49214 tggaactccatccatacttgg 49234
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>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end
          Length = 2197

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 448  ccttgatgatggggtgccgggggttgatctcca 480
            |||||||||||||||| | |||||||| |||||
Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073
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>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds
          Length = 2106

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 444  agctccttgatgatggggtgccgggggttgatctcca 480
            ||||||||||||||||||||   |||||||| |||||
Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 575     ggaggtgaccaccacacagg 594
               ||||||||||||||||||||
Sbjct: 1304504 ggaggtgaccaccacacagg 1304485
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>ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho GTPase activating
            protein 2 (srGAP2) (Formin-binding protein 2)
            (LOC519843), partial mRNA
          Length = 2576

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 389  cctcgccgtctgcttcaggccctcgctg 416
            ||||||| |||||||| |||||||||||
Sbjct: 1086 cctcgccatctgcttcgggccctcgctg 1113
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>ref|XM_646103.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (177.t00014)
          partial mRNA
          Length = 609

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  ctggtacagtagtacattac 25
          ||||||||||||||||||||
Sbjct: 77 ctggtacagtagtacattac 58
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>ref|XM_646496.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (157.t00015)
          partial mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  ctggtacagtagtacattac 25
          ||||||||||||||||||||
Sbjct: 77 ctggtacagtagtacattac 58
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>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 214065

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ctgcttcaggccctcgctgt 417
              ||||||||||||||||||||
Sbjct: 175515 ctgcttcaggccctcgctgt 175534
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>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 171236

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aatgaaatgaaagctaaatg 149
             ||||||||||||||||||||
Sbjct: 60679 aatgaaatgaaagctaaatg 60698
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>gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 heat shock protein
            (hsp-83) gene, complete cds
          Length = 3520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 444  agctccttgatgatggggtg 463
            ||||||||||||||||||||
Sbjct: 2455 agctccttgatgatggggtg 2436
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>gb|AF313474.1| Entamoeba histolytica retrotransposon-like element RLEEh2
          Length = 2473

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   ctggtacagtagtacattac 25
           ||||||||||||||||||||
Sbjct: 274 ctggtacagtagtacattac 293
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>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence
          Length = 161786

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   ctaatgaaatgaaagctaaatggg 151
             ||||||||| ||||||||||||||
Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261
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>gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FKHR mRNA, partial cds
          Length = 1000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 474 atctccaggaccctcttgcc 493
           ||||||||||||||||||||
Sbjct: 336 atctccaggaccctcttgcc 317
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 400     gcttcaggccctcgctgtcg 419
               ||||||||||||||||||||
Sbjct: 9004724 gcttcaggccctcgctgtcg 9004705



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 400     gcttcaggccctcgctgtcg 419
               ||||||||||||||||||||
Sbjct: 5172865 gcttcaggccctcgctgtcg 5172884
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>ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (Foxo1a), mRNA
          Length = 4171

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 474  atctccaggaccctcttgcc 493
            ||||||||||||||||||||
Sbjct: 1259 atctccaggaccctcttgcc 1240
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>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence
          Length = 174952

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   ctaatgaaatgaaagctaaa 147
             ||||||||||||||||||||
Sbjct: 56061 ctaatgaaatgaaagctaaa 56080
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>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   catttccagtccaacatttc 124
             ||||||||||||||||||||
Sbjct: 21017 catttccagtccaacatttc 21036
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>dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-619A14, complete
             sequence
          Length = 126000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   ggggctcaggtccaggctct 300
             ||||||||||||||||||||
Sbjct: 18841 ggggctcaggtccaggctct 18822
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>gb|AC145909.3| Gallus gallus BAC clone CH261-43H20 from chromosome unknown, complete
              sequence
          Length = 213402

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      agaaactggtacagtagtacatta 24
              |||||||||||||||| |||||||
Sbjct: 162770 agaaactggtacagtaatacatta 162747
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>dbj|AB022081.1| Brassica rapa DNA for ORF-c, complete cds
          Length = 573

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 544 tcttctccatgttggaactc 563
           ||||||||||||||||||||
Sbjct: 401 tcttctccatgttggaactc 382
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>dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, complete cds
          Length = 4219

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 471 ttgatctccaggaccctcttgccg 494
           |||| |||||||||||||||||||
Sbjct: 485 ttgagctccaggaccctcttgccg 462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,027,944
Number of Sequences: 3902068
Number of extensions: 4027944
Number of successful extensions: 95249
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95027
Number of HSP's gapped (non-prelim): 222
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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