| Clone Name | rbags18b18 |
|---|---|
| Clone Library Name | barley_pub |
>CT059_MOUSE (Q8VCL5) Putative transporter C20orf59 homolog| Length = 439 Score = 42.0 bits (97), Expect = 0.002 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -1 Query: 665 SNTAGVLAGVFGTAATGYILQ-KGSWDSVFQVAVLLYIVGTVVWNLFSTGERI 510 +NTAG LAGV G +GY+++ GSW VF + ++ +G + +F +R+ Sbjct: 378 ANTAGALAGVVGVCLSGYLIETTGSWTCVFHLVAIISNLGLGTFLVFGKAQRV 430
>CT059_HUMAN (Q9BYT1) Putative transporter C20orf59| Length = 436 Score = 40.4 bits (93), Expect = 0.005 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 665 SNTAGVLAGVFGTAATGYILQ-KGSWDSVFQVAVLLYIVGTVVWNLFSTGERI 510 +NTAG LAGV G GY+++ GSW +F + ++ +G + +F +R+ Sbjct: 375 ANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRV 427
>PICO_DROME (Q9V7S5) Putative inorganic phosphate cotransporter| Length = 529 Score = 37.7 bits (86), Expect = 0.031 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Frame = -1 Query: 665 SNTAGVLAGVFGTAATGYILQK------GSWDSVFQVAVLLYIVGTVVWNLFSTGER 513 +N + LAG+ A G+++ G W VF +A +YI+ +N+F +GER Sbjct: 434 TNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGSGER 490
>PICO_DROAN (O61369) Putative inorganic phosphate cotransporter| Length = 483 Score = 36.2 bits (82), Expect = 0.091 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Frame = -1 Query: 665 SNTAGVLAGVFGTAATGYILQK------GSWDSVFQVAVLLYIVGTVVWNLFSTGER 513 +N + LAG+ A G ++ G W VF +A +YI+ +N+F +GER Sbjct: 388 TNCSANLAGLLAPIAAGNLISDPSKPVMGQWQIVFFIAAFVYIICGTFYNIFGSGER 444
>YLD2_CAEEL (Q03567) Hypothetical protein C38C10.2 in chromosome III| Length = 493 Score = 33.1 bits (74), Expect = 0.77 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = -1 Query: 662 NTAGVLAGVFGTAATGYILQKGS---WDSVFQVAVLLYIVGTVVWNLFSTGE 516 NT LAG+ A + Y+ G+ W V + + +G +++++F++GE Sbjct: 413 NTISALAGIISPAVSSYLTPNGTQEEWQMVLWLTAGILTIGALLFSIFASGE 464
>PI2R_RAT (P43253) Prostacyclin receptor (Prostanoid IP receptor) (PGI| receptor) (Prostaglandin I2 receptor) Length = 416 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +2 Query: 401 LSLWKIDLLLVGVHQKRQTSAKSATFSYSGRPWLIRGSSLRSKRGS-TPLSLLCTAEQPP 577 L W L VH QT SGR + SL++K G+ PLS T + P Sbjct: 331 LKFWLCCLCARSVHGDLQTPLSRPV---SGRRDTLAPDSLQAKEGNWVPLSTWGTGQVAP 387 Query: 578 ETRYPRSLSEGCS 616 T P S +GCS Sbjct: 388 LTAVPLSGGDGCS 400
>NU6M_XENLA (P03927) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 170 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 599 GSWDSVFQVAVLLYIVGTVVWNLFSTGERI 510 GSW VF V L+Y++G +VW LF G + Sbjct: 82 GSWSVVFYV--LVYLIGVLVWYLFLGGVEV 109
>CRTC_NICPL (Q40401) Calreticulin precursor| Length = 416 Score = 30.0 bits (66), Expect = 6.5 Identities = 25/93 (26%), Positives = 38/93 (40%) Frame = +1 Query: 256 LAS*LSQQKFNHQVQPFSVIFTPSIAQTSNAIVQLNLLLKTRVFFLRVSLALEDRFTSCR 435 L+ + Q+KF P+S++F P I S V L ++ + Sbjct: 121 LSGDVDQKKFGGDT-PYSIMFGPDICGYSTKKVHAILTYNDTNHLIK------------K 167 Query: 436 STPKKTDISKISYFFI*RPSVAYSRILSPVEKR 534 P +TD Y FI RP YS ++ VEK+ Sbjct: 168 EVPCETDQLTHVYTFILRPDATYSILIDNVEKQ 200
>CRTC2_ARATH (Q38858) Calreticulin-2 precursor| Length = 424 Score = 29.6 bits (65), Expect = 8.5 Identities = 25/93 (26%), Positives = 38/93 (40%) Frame = +1 Query: 256 LAS*LSQQKFNHQVQPFSVIFTPSIAQTSNAIVQLNLLLKTRVFFLRVSLALEDRFTSCR 435 L+ + Q+KF P+S++F P I S V L ++ + Sbjct: 116 LSGDVDQKKFGGDT-PYSIMFGPDICGYSTKKVHAILTYNGANHLIK------------K 162 Query: 436 STPKKTDISKISYFFI*RPSVAYSRILSPVEKR 534 P +TD Y FI RP YS ++ VEK+ Sbjct: 163 DVPCETDQLTHVYTFILRPDATYSILIDNVEKQ 195
>HRH3_CAVPO (Q9JI35) Histamine H3 receptor (HH3R)| Length = 445 Score = 29.6 bits (65), Expect = 8.5 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -1 Query: 662 NTAGVLAGVFGTAATGYILQKGSWDSVFQVAVLLYIVGTVVWN 534 N +G LAG AA G +W +V + L IV TV+ N Sbjct: 11 NASGALAGEAAAAAGGARTFSAAWTAVLAALMALLIVATVLGN 53
>YOQ6_CAEEL (P34644) Hypothetical protein ZK512.6 in chromosome III| Length = 576 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = -1 Query: 665 SNTAGVLAGVFGTAATGYIL--QKGSWDSVFQVAVLLYIVGTVVWNLFSTGE 516 SN G LAG+ T K W SVF +A L++ G + ++++GE Sbjct: 444 SNGIGTLAGLTCPFVTEAFTAHSKHGWTSVFLLASLIHFTGVTFYAVYASGE 495 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,950,653 Number of Sequences: 219361 Number of extensions: 1992784 Number of successful extensions: 5097 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5097 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)