>ref|XM_464744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1148

 Score =  165 bits (83), Expect = 1e-37
 Identities = 126/141 (89%)
 Strand = Plus / Minus

                                                                       
Query: 278 gactgcttcaaagacatcgctctggcgcgaaggttgagaaatatcccccagcancatgca 337
           ||||||||||||||||| || || || |||||||| ||||||||||||||||| ||||||
Sbjct: 873 gactgcttcaaagacatggcccttgcacgaaggttaagaaatatcccccagcaacatgca 814

                                                                       
Query: 338 acanagctgtggacaatcacccgaaactgcaaaggcacgtactgatggtttatccaacca 397
           ||| ||||||||| ||||||||| |||||||| |||| ||||  ||| ||||||||||||
Sbjct: 813 acaaagctgtggaaaatcacccggaactgcaacggcatgtacatatgatttatccaacca 754

                                
Query: 398 actactggccaaaacatccaa 418
           |||| ||||||||||||||||
Sbjct: 753 actattggccaaaacatccaa 733

>dbj|AK121976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108J17, full
           insert sequence
          Length = 1146

 Score =  165 bits (83), Expect = 1e-37
 Identities = 126/141 (89%)
 Strand = Plus / Minus

                                                                       
Query: 278 gactgcttcaaagacatcgctctggcgcgaaggttgagaaatatcccccagcancatgca 337
           ||||||||||||||||| || || || |||||||| ||||||||||||||||| ||||||
Sbjct: 871 gactgcttcaaagacatggcccttgcacgaaggttaagaaatatcccccagcaacatgca 812

                                                                       
Query: 338 acanagctgtggacaatcacccgaaactgcaaaggcacgtactgatggtttatccaacca 397
           ||| ||||||||| ||||||||| |||||||| |||| ||||  ||| ||||||||||||
Sbjct: 811 acaaagctgtggaaaatcacccggaactgcaacggcatgtacatatgatttatccaacca 752

                                
Query: 398 actactggccaaaacatccaa 418
           |||| ||||||||||||||||
Sbjct: 751 actattggccaaaacatccaa 731

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                           
Query: 325     ccagcancatgcaacanagctgtggacaatcacccgaaactgcaaaggcacgtactgatg 384
               |||||| ||||||||| ||||||||| ||||||||| |||||||| |||| ||||  |||
Sbjct: 7065906 ccagcaacatgcaacaaagctgtggaaaatcacccggaactgcaacggcatgtacatatg 7065965

                                           
Query: 385     gtttatccaaccaactactggccaaaac 412
                |||||||||||||||| ||||||||||
Sbjct: 7065966 atttatccaaccaactattggccaaaac 7065993



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                
Query: 278     gactgcttcaaagacatcgctctggcgcgaaggttgagaaatatccccc 326
               ||||||||||||||||| || || || |||||||| |||||||||||||
Sbjct: 7065766 gactgcttcaaagacatggcccttgcacgaaggttaagaaatatccccc 7065814

>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0495C02
          Length = 151467

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                         
Query: 325   ccagcancatgcaacanagctgtggacaatcacccgaaactgcaaaggcacgtactgatg 384
             |||||| ||||||||| ||||||||| ||||||||| |||||||| |||| ||||  |||
Sbjct: 69325 ccagcaacatgcaacaaagctgtggaaaatcacccggaactgcaacggcatgtacatatg 69384

                                         
Query: 385   gtttatccaaccaactactggccaaaac 412
              |||||||||||||||| ||||||||||
Sbjct: 69385 atttatccaaccaactattggccaaaac 69412



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 278   gactgcttcaaagacatcgctctggcgcgaaggttgagaaatatccccc 326
             ||||||||||||||||| || || || |||||||| |||||||||||||
Sbjct: 69185 gactgcttcaaagacatggcccttgcacgaaggttaagaaatatccccc 69233

>emb|AL358937.16| Human DNA sequence from clone RP11-60I3 on chromosome 9 Contains the 3'
              end of the NR4A3 gene for nuclear receptor subfamily 4
              group A member 3, the STX17 gene for syntaxin 17, the 3'
              end of the TXNDC4 gene for thioredoxin domain containing 4
              (endoplasmic reticulum) (ERP44, ERp44,KIAA0573) and a CpG
              island, complete sequence
          Length = 146889

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    tattacatagcaaacaccatcc 219
              ||||||||||||||||||||||
Sbjct: 110344 tattacatagcaaacaccatcc 110323

>gb|AC129670.4| Rattus norvegicus BAC CH230-390M9 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 119666

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 200   ttacatagcaaacaccatccttgtt 224
             |||||| ||||||||||||||||||
Sbjct: 28659 ttacatggcaaacaccatccttgtt 28683

>gb|AC131946.1| Homo sapiens BAC clone RP11-108G15 from 4, complete sequence
          Length = 60733

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   caaacaccatccttgttctc 227
             ||||||||||||||||||||
Sbjct: 11052 caaacaccatccttgttctc 11033

>emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in linkage group 20,
             complete sequence
          Length = 185926

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    ttaaatggtgccagcagagaaatc 94
             ||||||||||||||||| ||||||
Sbjct: 21116 ttaaatggtgccagcagtgaaatc 21139


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,408,030
Number of Sequences: 3902068
Number of extensions: 2408030
Number of successful extensions: 33941
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33915
Number of HSP's gapped (non-prelim): 26
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)