>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score =  211 bits (536), Expect = 2e-54
 Identities = 117/173 (67%), Positives = 128/173 (73%), Gaps = 36/173 (20%)
 Frame = -2

Query: 661  QK*AETHLPELKTGDGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLLENTGDFVRSNELQ 482
            +K AE HLPELKT DG+SIP+EDIGTSQVW+MRYRFWPNNKSRMYLLENTGDFVRSNELQ
Sbjct: 556  KKEAEVHLPELKTRDGVSIPMEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQ 615

Query: 481  EGDFIVLYSDVKSGKYLIRGVKV-RAAQE-------LAKHKNGSPEKGG----------- 359
            EGDFIV+YSD+KSGKYLIRGVKV RAAQE       + KHK+GSPEK G           
Sbjct: 616  EGDFIVIYSDIKSGKYLIRGVKVRRAAQEQGNSSGAVGKHKHGSPEKPGVSSNTKPAGAE 675

Query: 358  --------------ASEVKAEDGGCKEKSPHGVRRSRQE---AASMNQMAVSI 251
                          A+  KA+ GGCK KSPHGVRRSRQE   AASM+QMAVSI
Sbjct: 676  DGTGGDDSPEAAAAAAAGKADGGGCKGKSPHGVRRSRQEAAAAASMSQMAVSI 728

>VIV1_MAIZE (P26307) Regulatory protein viviparous-1|
          Length = 691

 Score =  184 bits (468), Expect = 2e-46
 Identities = 102/156 (65%), Positives = 115/156 (73%), Gaps = 19/156 (12%)
 Frame = -2

Query: 661  QK*AETHLPELKTGDGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLLENTGDFVRSNELQ 482
            +K AE HLPELKT DGISIP+EDIGTS+VW+MRYRFWPNNKSRMYLLENTG+FVRSNELQ
Sbjct: 536  KKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGEFVRSNELQ 595

Query: 481  EGDFIVLYSDVKSGKYLIRGVKVR--AAQELAKHKNG----------SPEKGGA------ 356
            EGDFIV+YSDVKSGKYLIRGVKVR   AQE     +G           PE+  A      
Sbjct: 596  EGDFIVIYSDVKSGKYLIRGVKVRPPPAQEQGSGSSGGGKHRPLCPAGPERAAAAGAPED 655

Query: 355  SEVKAEDGGCKEKSPHGVRRSRQE-AASMNQMAVSI 251
            + V    G CK +SP GVRR RQ+ A +M+QMAVSI
Sbjct: 656  AVVDGVSGACKGRSPEGVRRVRQQGAGAMSQMAVSI 691

>ABI3_ARATH (Q01593) Abscisic acid-insensitive protein 3|
          Length = 720

 Score =  147 bits (371), Expect = 3e-35
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = -2

Query: 661 QK*AETHLPELKTGDGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLLENTGDFVRSNELQ 482
           +K AETHLPEL+  DGIS+ +EDIGTS+VW+MRYRFWPNNKSRMYLLENTGDFV++N LQ
Sbjct: 591 KKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVKTNGLQ 650

Query: 481 EGDFIVLYSDVKSGKYLIRGVKVR 410
           EGDFIV+YSDVK GKYLIRGVKVR
Sbjct: 651 EGDFIVIYSDVKCGKYLIRGVKVR 674

>RAV1_ARATH (Q9ZWM9) DNA-binding protein RAV1|
          Length = 344

 Score = 36.6 bits (83), Expect = 0.070
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
 Frame = -2

Query: 652 AETHLPELKTG---DGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLL-ENTGDFVRSNEL 485
           AE H P   +     G+ +  ED+   +VW  RY +W  N S+ Y+L +    FV+   L
Sbjct: 210 AEKHFPLPSSNVSVKGVLLNFEDVN-GKVWRFRYSYW--NSSQSYVLTKGWSRFVKEKNL 266

Query: 484 QEGDFIVLYSDVKSGKYLIRGVKVRAAQEL 395
           + GD +         + L  G K R+  +L
Sbjct: 267 RAGDVVSFSRSNGQDQQLYIGWKSRSGSDL 296

>TBB_CANAL (P10875) Tubulin beta chain (Beta tubulin)|
          Length = 449

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 523 LENTGDFVRSNELQEGDFIVLYSDVKSGKYLIRGVKV 413
           L+N G +V +NELQ+    V +++  SGKY+ R V V
Sbjct: 30  LDNNGTYVGNNELQKSKLDVYFNEATSGKYVPRAVLV 66

>YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1 intergenic|
           region
          Length = 1132

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 388 HKNGSPEKGGASEVKAEDGGCKEKSPHGVRRSRQEAASMNQ 266
           H+N + +K G+ E K+E GG  +   HG   S+    S+ Q
Sbjct: 199 HRNKTTKKAGSQEKKSESGGKSKNDYHGKVLSKMHTTSLKQ 239

>FER1_EQUTE (P00234) Ferredoxin-1 (Ferredoxin I)|
          Length = 95

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query: 300 RTPCGDFSLQPPSSAFTSDAPPFSG--LPFLCLASSCAA 410
           +TP G+F+L  P      DA   +G  LPF C A +C++
Sbjct: 7   KTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSS 45

>FER1_EQUAR (P00235) Ferredoxin-1 (Ferredoxin I)|
          Length = 95

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query: 300 RTPCGDFSLQPPSSAFTSDAPPFSG--LPFLCLASSCAA 410
           +TP G+F+L  P      DA   +G  LPF C A +C++
Sbjct: 7   KTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSS 45

>IF2_CLOTE (Q895J8) Translation initiation factor IF-2|
          Length = 685

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = -2

Query: 616 GISIPIEDIGTSQVWSMRYRFW--PNNKSRMYLLENTGDFVRSNELQEGDFIV--LYSDV 449
           G SIP E +G S+V S   RF+   + K+   + E   +  RS  L      +  LYS +
Sbjct: 417 GPSIPAEILGLSEVPSAGDRFYVVKDEKTAREMAEKRKEKTRSEYLATSKVSLEDLYSQI 476

Query: 448 KSGKYLIRGVKVRA-AQELAKHKNGSPEKGGASEVK 344
           K GK     + V+A  Q   +    S EK    EVK
Sbjct: 477 KEGKIKELNIIVKADVQGTIEAIRQSLEKLSTDEVK 512

>Y591_AQUAE (O66853) Hypothetical protein aq_591|
          Length = 333

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -2

Query: 517 NTGDFVRSNELQEGDFIVLYSDVKSGKYLIRGVKVRAAQELAKHKNGSPEKG 362
           NTGDF R++E+ E  + +  ++     Y  RG+ +RAA  L + K G+P+ G
Sbjct: 232 NTGDFYRAHEILEEVWGLFKNEEIKKCY--RGL-IRAAIALHRFKEGNPQSG 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,196,358
Number of Sequences: 219361
Number of extensions: 1824751
Number of successful extensions: 5366
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5360
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)