ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB047554.1| Triticum aestivum VP1 mRNA for transcription fac... 535 e-149
2emb|AJ400712.1|TAE400712 Triticum aestivum vp1A gene for VIVIPAR... 482 e-133
3gb|AY150678.1| Hordeum vulgare subsp. vulgare VP1 (VP1) mRNA, pa... 418 e-113
4emb|Y09939.1|HVVIVIPA1 H.vulgare mRNA for transcription factor vp1 414 e-112
5emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAR... 387 e-104
6emb|AJ431703.1|HVU431703 Hordeum vulgare vip gene for viviparous... 361 2e-96
7emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAR... 351 2e-93
8gb|DQ416754.1| Avena fatua clone 2 viviparous 1 mRNA, partial cds 317 3e-83
9gb|DQ416753.1| Avena fatua clone 1 viviparous 1 mRNA, partial cds 317 3e-83
10emb|AJ001140.1|AFJ001140 Avena fatua mRNA for VIVIPAROUS 1 homol... 317 3e-83
11gb|DQ416763.1| Avena fatua clone 11 viviparous 1 mRNA, partial cds 309 6e-81
12gb|DQ416757.1| Avena fatua clone 5 truncated viviparous 1 mRNA, ... 307 2e-80
13gb|DQ416762.1| Avena fatua clone 10 viviparous 1 mRNA, partial cds 293 4e-76
14gb|DQ416759.1| Avena fatua clone 7 viviparous 1 mRNA, partial cds 293 4e-76
15gb|DQ416758.1| Avena fatua clone 6 viviparous 1 mRNA, partial cds 293 4e-76
16gb|DQ416756.1| Avena fatua clone 4 viviparous 1 mRNA, partial cds 293 4e-76
17gb|DQ416755.1| Avena fatua clone 3 viviparous 1 mRNA, partial cds 293 4e-76
18gb|DQ416764.1| Avena fatua clone 12 viviparous 1 mRNA, partial cds 285 9e-74
19gb|DQ416761.1| Avena fatua clone 9 viviparous 1 mRNA, partial cds 285 9e-74
20gb|DQ416760.1| Avena fatua clone 8 viviparous 1 mRNA, partial cds 285 9e-74
21gb|M60214.1|MZEREGPRO Zea mays viviparous-1 mRNA, complete cds 246 8e-62
22ref|NM_189891.1| Oryza sativa (japonica cultivar-group), predic... 244 3e-61
23dbj|AK105441.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
24dbj|AK073805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
25gb|AY110818.1| Zea mays CL1869_-1 mRNA sequence 224 3e-55
26emb|AJ279200.1|ETE279200 Eragrostis tef partial mRNA for transcr... 192 1e-45
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
28dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
29dbj|D16640.1|RICOSVP1 Oryza sativa (japonica cultivar-group) DNA... 100 1e-17
30emb|AJ000552.1|CPVP1HOM Craterostigma plantagineum mRNA for VP1 ... 84 7e-13
31dbj|AB015183.1| Mesembryanthemum crystallinum McVp1 mRNA for tra... 70 1e-08
32ref|NM_113376.2| Arabidopsis thaliana ABI3 (ABA INSENSITIVE 3); ... 62 2e-06
33dbj|AK220739.1| Arabidopsis thaliana mRNA for abscisic acid-inse... 62 2e-06
34dbj|AK220879.1| Arabidopsis thaliana mRNA for abscisic acid-inse... 62 2e-06
35emb|X68141.1|ATABI3 A.thaliana mRNA for ABI3 protein 62 2e-06
36emb|AJ003165.1|PTAJ3165 Populus trichocarpa cv. Trichobel ABI3 gene 60 1e-05
37ref|XM_474341.1| Oryza sativa (japonica cultivar-group), predic... 58 4e-05
38emb|AJ131113.1|CNO131113 Chamaecyparis nootkatensis mRNA for VP1... 58 4e-05
39emb|AJ003166.1|PTAJ3166 Populus trichocarpa cv. Trichobel ABI3 mRNA 58 4e-05
40dbj|AK072874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
41ref|XM_474342.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
42emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4,... 56 2e-04
43dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
44emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 2e-04
45emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 54 6e-04
46dbj|AB164427.1| Psophocarpus tetragonolobus wbABI3 mRNA for ABI-... 54 6e-04
47gb|U28645.1|PVU28645 Phaseolus vulgaris embryo-specific acidic t... 54 6e-04
48dbj|AB085836.1| Phaseolus vulgaris PvALF mRNA for abscisic acid ... 54 6e-04
49gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomi... 52 0.002
50gb|AF400124.1|AF400124 Arabidopsis thaliana LEAFY COTYLEDON 2 ge... 52 0.002
51dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
52dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
53dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
54emb|AJ309217.1|STU309217 Solanum tuberosum partial mRNA for VP1/... 52 0.002
55dbj|AK104021.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
56dbj|AK072453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
57dbj|AK071706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
58dbj|AK066827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
59gb|AF426832.1| Prunus avium ABI3-like transcription factor mRNA,... 50 0.009
60ref|NM_102595.2| Arabidopsis thaliana LEC2 (LEAFY COTYLEDON 2); ... 50 0.009
61gb|AY568668.1| Arabidopsis thaliana leafy cotyledon 2 (LEC2) mRN... 50 0.009
62gb|AF411073.1| Prunus avium viviparous protein (vp1) mRNA, compl... 50 0.009
63gb|DQ446296.1| Arabidopsis thaliana clone pENTR221-At1g28300 tra... 50 0.009
64emb|AJ630496.1| Arabidopsis thaliana mRNA for hypothetical prote... 50 0.009
65gb|AF400123.1|AF400123 Arabidopsis thaliana LEAFY COTYLEDON 2 mR... 50 0.009
66dbj|AK109920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
67ref|NM_191730.1| Oryza sativa (japonica cultivar-group), predic... 48 0.037
68dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
69gb|AF145787.1|SBVP1S3 Sorghum bicolor genomic sequence similar t... 46 0.15
70gb|AF148560.1|SBISVP3 Sorghum bicolor insertion sequence IS9530 ... 46 0.15
71dbj|AB099513.1| Fagopyrum esculentum VP1 gene for transcription ... 46 0.15
72dbj|AB080195.1| Pisum sativum abi3 mRNA for ABA insensitive 3, c... 46 0.15
73emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 42 2.3
74gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 2.3
75emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-3... 42 2.3
76ref|XM_606908.2| PREDICTED: Bos taurus similar to CG6451-PA, tra... 40 9.1
77ref|XM_876920.1| PREDICTED: Bos taurus similar to CG6451-PA, tra... 40 9.1
78gb|DQ374087.1| Beta vulgaris chromosome 9 clone BAC33 genomic se... 40 9.1
79emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, com... 40 9.1
80gb|AC112516.2| Homo sapiens chromosome 3 clone RP11-350F11, comp... 40 9.1
81gb|AC104438.2| Homo sapiens chromosome 3 clone RP11-757A9, compl... 40 9.1
82gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, com... 40 9.1
83dbj|AP001883.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.1
84gb|AC161885.3| Gallus gallus BAC clone CH261-15B19 from chromoso... 40 9.1
85dbj|AB005558.1| Daucus carota mRNA for C-ABI3 protein, complete cds 40 9.1 
>dbj|AB047554.1| Triticum aestivum VP1 mRNA for transcription factor VP-1 homologue,
            complete cds
          Length = 2064

 Score =  535 bits (270), Expect = e-149
 Identities = 374/409 (91%), Gaps = 6/409 (1%)
 Strand = Plus / Minus

                                                                        
Query: 252  atgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgt 311
            |||||||| ||||||||||||||||||  ||| |||||||||||||||||||| ||||| 
Sbjct: 2060 atgctcacggccatctggttcatggagctggcttcctggcgagatcgccggacaccgtgc 2001

                                                                        
Query: 312  ggggacttctccttgcagccgccgtcttcg------gccttcacttcggacgctccccct 365
            || |||||||| ||||| || ||||||||       |||||||| |||||||| || |||
Sbjct: 2000 ggagacttctctttgcaaccaccgtcttctccgcccgccttcacgtcggacgccccacct 1941

                                                                        
Query: 366  ttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacgccc 425
            |||||||||||| |||||||||||||||| || ||||||   ||||||||||||||||| 
Sbjct: 1940 ttctctggactggcattcttgtgcttggctagatcctgttgagctcttaccttcacgccg 1881

                                                                        
Query: 426  cgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgc 485
            ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 1880 cgtatcagatatttgcctgacttgacatcagagtaaagcacgatgaaatcaccctcctgc 1821

                                                                        
Query: 486  agctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttgttg 545
            |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1820 agctcattggaccgaacaaagtcaccagtgttctctagaagatacattctgctcttgttg 1761

                                                                        
Query: 546  ttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatgggg 605
            ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1760 ttgggccaaaatcggtaccgcatgctccagacctgagatgtgccgatgtcctcaatgggg 1701

                                                             
Query: 606  atcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 atcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 1652
to top
>emb|AJ400712.1|TAE400712 Triticum aestivum vp1A gene for VIVIPAROUS1, exons 1-6
          Length = 4349

 Score =  482 bits (243), Expect = e-133
 Identities = 384/428 (89%), Gaps = 16/428 (3%)
 Strand = Plus / Minus

                                                                        
Query: 16   tgtacagaagggttacggccttta--caggtttaacagcacggaccatgcattcttcagc 73
            |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 4227 tgtacagaagggttacagcctttatacaggtttaacagcacggaccatgcattcttcagc 4168

                                                                        
Query: 74   gtcacatctgagtctgaccgatagctactttagtatcatcatccctaactagggctacag 133
            |||||||||||      |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4167 gtcacatctga------ccgatagctactttagtatcatcatccctaactagggctacag 4114

                                                                        
Query: 134  cagtacacggaat-acggagcatagaactagagatcgatttgatcatcatcagcaggtat 192
            ||||||||||||  ||||| |||||||| ||||||||||||||||||||||| | |||||
Sbjct: 4113 cagtacacggaagcacggatcatagaacgagagatcgatttgatcatcatcaacgggtat 4054

                                                                        
Query: 193  acttgagctagctaagt-agtcttcaatggtggatcagaccacaagtctgttcatttcaa 251
            ||||||||||||||| | |||||||||||||||||| |||  | || ||| |||||||| 
Sbjct: 4053 acttgagctagctaactgagtcttcaatggtggatcggacggcgagcctgctcatttcag 3994

                                                                        
Query: 252  atgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgt 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 3993 atgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgg 3934

                                                                        
Query: 312  ggggacttctccttgcagccgccgtctt------cggccttcacttcggacgctccccct 365
            |||| |||||||||||||||||||||||      | |||||||| |||||||| || |||
Sbjct: 3933 gggggcttctccttgcagccgccgtcttctccgcccgccttcacgtcggacgccccgcct 3874

                                                                        
Query: 366  ttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacgccc 425
            |||||||||||| |||||||||||||||| || ||||||   ||||| ||||||||||| 
Sbjct: 3873 ttctctggactggcattcttgtgcttggctagatcctgttgcgctctcaccttcacgccg 3814

                    
Query: 426  cgtatcag 433
            ||||||||
Sbjct: 3813 cgtatcag 3806



 Score =  210 bits (106), Expect = 4e-51
 Identities = 109/110 (99%)
 Strand = Plus / Minus

                                                                        
Query: 556  accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 2280

                                                              
Query: 616  cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
            ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2279 cgtcccccgtcttgagctccggcaggtgagtctccgcttccttctgaaac 2230



 Score =  107 bits (54), Expect = 5e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                        
Query: 434  atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
            ||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3145 atatttgcccgacttgacatcagagtaaagcacgatgaaatcaccctcctgcagctcatt 3086

                              
Query: 494  cgagcgaacgaagtcacc 511
            ||| ||||| ||||||||
Sbjct: 3085 cgaccgaacaaagtcacc 3068



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                              
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 556
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2971 tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 2922
to top
>gb|AY150678.1| Hordeum vulgare subsp. vulgare VP1 (VP1) mRNA, partial cds
          Length = 1181

 Score =  418 bits (211), Expect = e-113
 Identities = 211/211 (100%)
 Strand = Plus / Minus

                                                                        
Query: 444  gactttacatcggagtagagcacgatgaaatcaccctcctgcagctcattcgagcgaacg 503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gactttacatcggagtagagcacgatgaaatcaccctcctgcagctcattcgagcgaacg 1122

                                                                        
Query: 504  aagtcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtac 563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 aagtcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtac 1062

                                                                        
Query: 564  cgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtccccc 623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 cgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtccccc 1002

                                           
Query: 624  gtcttgagctccggcaggtgagtctccgctt 654
            |||||||||||||||||||||||||||||||
Sbjct: 1001 gtcttgagctccggcaggtgagtctccgctt 971
to top
>emb|Y09939.1|HVVIVIPA1 H.vulgare mRNA for transcription factor vp1
          Length = 265

 Score =  414 bits (209), Expect = e-112
 Identities = 209/209 (100%)
 Strand = Plus / Minus

                                                                       
Query: 446 ctttacatcggagtagagcacgatgaaatcaccctcctgcagctcattcgagcgaacgaa 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttacatcggagtagagcacgatgaaatcaccctcctgcagctcattcgagcgaacgaa 206

                                                                       
Query: 506 gtcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccg 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccg 146

                                                                       
Query: 566 catgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtcccccgt 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 catgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtcccccgt 86

                                        
Query: 626 cttgagctccggcaggtgagtctccgctt 654
           |||||||||||||||||||||||||||||
Sbjct: 85  cttgagctccggcaggtgagtctccgctt 57
to top
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6
          Length = 4230

 Score =  387 bits (195), Expect = e-104
 Identities = 338/384 (88%), Gaps = 15/384 (3%)
 Strand = Plus / Minus

                                                                        
Query: 59   catgcattcttcagcgtcacatctgagtctgaccgatagctactttagtatcatcatccc 118
            ||||||||||||||||||||||||||      ||||||||||||||||||||| ||||||
Sbjct: 4230 catgcattcttcagcgtcacatctga------ccgatagctactttagtatcaccatccc 4177

                                                                        
Query: 119  taactagggctacagcagtacacggaat-acggagcatagaactagagatcgatttgatc 177
            |||||||||||||||||||||||||||  ||||| |||||| |  |||||||||||||||
Sbjct: 4176 taactagggctacagcagtacacggaagcacggatcatagagcgggagatcgatttgatc 4117

                                                                        
Query: 178  atcatcagcaggtatacttgagctagctaagtagtcttcaatggtggatcagaccaca-- 235
            ||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |   
Sbjct: 4116 atcatcaacaggtatacttgagctagctaagtagtcttcaatgggggatcggaccgcgcg 4057

                                                                        
Query: 236  agtctgttcatttcaaatgctcaccgccatctggttcatggaggcggcctcctggcgaga 295
            || ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4056 agcctgctcatttcagatgctcacggccatctggttcatggaggcggcctcctggcgaga 3997

                                                                        
Query: 296  tcgccggacgccgtgtggggacttctccttgcagccgccgtctt------cggccttcac 349
            ||||||||||||||| || |||||||| ||||| || |||||||      | |||||| |
Sbjct: 3996 tcgccggacgccgtgcggagacttctctttgcaaccaccgtcttctgcgcccgccttcgc 3937

                                                                        
Query: 350  ttcggacgctccccctttctctggactgccattcttgtgcttggccagttcctgtgcggc 409
             |||||||| || |||||||||||||||||||||||||||||||| || ||||||   ||
Sbjct: 3936 gtcggacgccccacctttctctggactgccattcttgtgcttggctagatcctgttgcgc 3877

                                    
Query: 410  tcttaccttcacgccccgtatcag 433
            ||||||||||||||| ||||||||
Sbjct: 3876 tcttaccttcacgccgcgtatcag 3853



 Score =  210 bits (106), Expect = 4e-51
 Identities = 109/110 (99%)
 Strand = Plus / Minus

                                                                        
Query: 556  accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2313 accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 2254

                                                              
Query: 616  cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
            ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2253 cgtcccccgtcttgagctccggcaggtgagtctccgcttccttctgaaac 2204



 Score =  101 bits (51), Expect = 3e-18
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                        
Query: 434  atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
            ||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3232 atatttgcccgacttgacatcagagtaaagcacgatgaaatcaccctcctgcagctcatt 3173

                           
Query: 494  cgagcgaacgaagtc 508
            ||| ||||| |||||
Sbjct: 3172 cgaccgaacaaagtc 3158



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 49/50 (98%)
 Strand = Plus / Minus

                                                              
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 556
            |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3058 tcaccagtgttctccagaagatacattctgctcttgttgttgggccaaaa 3009
to top
>emb|AJ431703.1|HVU431703 Hordeum vulgare vip gene for viviparous-1 protein, exons 1-6
          Length = 3554

 Score =  361 bits (182), Expect = 2e-96
 Identities = 182/182 (100%)
 Strand = Plus / Minus

                                                                        
Query: 252  atgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgt 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3550 atgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgt 3491

                                                                        
Query: 312  ggggacttctccttgcagccgccgtcttcggccttcacttcggacgctccccctttctct 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3490 ggggacttctccttgcagccgccgtcttcggccttcacttcggacgctccccctttctct 3431

                                                                        
Query: 372  ggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacgccccgtatc 431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430 ggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacgccccgtatc 3371

              
Query: 432  ag 433
            ||
Sbjct: 3370 ag 3369



 Score =  210 bits (106), Expect = 4e-51
 Identities = 109/110 (99%)
 Strand = Plus / Minus

                                                                        
Query: 556  accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2322 accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 2263

                                                              
Query: 616  cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
            ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2262 cgtcccccgtcttgagctccggcaggtgagtctccgcttccttctgaaac 2213



 Score =  155 bits (78), Expect = 2e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                        
Query: 434  atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3079 atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 3020

                              
Query: 494  cgagcgaacgaagtcacc 511
            ||||||||||||||||||
Sbjct: 3019 cgagcgaacgaagtcacc 3002



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                              
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 556
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2907 tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 2858
to top
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6
          Length = 4034

 Score =  351 bits (177), Expect = 2e-93
 Identities = 337/388 (86%), Gaps = 13/388 (3%)
 Strand = Plus / Minus

                                                                        
Query: 59   catgcattcttcagcgtcacatctgagtctga--ccgatagctactttagtatcatcatc 116
            ||||||||||||||||||||||||||    ||  ||||||||||||||||||||||||||
Sbjct: 4034 catgcattcttcagcgtcacatctgaccaagaaaccgatagctactttagtatcatcatc 3975

                                                                        
Query: 117  cctaactagggctacagcagtacacggaat-acggagcatagaactagagatcgatttga 175
            ||||||||||||||| |||||||||||||  ||||| ||||||||  |||||||||||||
Sbjct: 3974 cctaactagggctacggcagtacacggaagcacggatcatagaacgggagatcgatttga 3915

                                                                        
Query: 176  tcatcatcagcaggtatacttgagctagctaa----gtagtcttcaatggtggatcagac 231
            ||||||| ||||||||||||||||||||||||    |||||||||||||| ||||| |||
Sbjct: 3914 tcatcattagcaggtatacttgagctagctaattaagtagtcttcaatgggggatcggac 3855

                                                                        
Query: 232  cacaagtctgttcatttcaaatgctcaccgccatctggttcatggaggcggcctcctggc 291
              | || ||| |||||||| |||||||||||||||||||||||||||  ||| |||||||
Sbjct: 3854 ggcgagcctgctcatttcagatgctcaccgccatctggttcatggagctggcttcctggc 3795

                                                                        
Query: 292  gagatcgccggacgccgtgtggggacttctccttgcagccgccgtctt------cggcct 345
            ||||||||||||| ||||| || |||||||| ||||| || |||||||      | ||||
Sbjct: 3794 gagatcgccggacaccgtgcggagacttctctttgcaaccaccgtcttctccgcccgcct 3735

                                                                        
Query: 346  tcacttcggacgctccccctttctctggactgccattcttgtgcttggccagttcctgtg 405
            |||| |||||||| || ||||||||||||||| |||||||||||||||| || |||||| 
Sbjct: 3734 tcacgtcggacgccccacctttctctggactggcattcttgtgcttggctagatcctgtt 3675

                                        
Query: 406  cggctcttaccttcacgccccgtatcag 433
              ||||||||||||||||| ||||||||
Sbjct: 3674 gagctcttaccttcacgccgcgtatcag 3647



 Score =  202 bits (102), Expect = 1e-48
 Identities = 108/110 (98%)
 Strand = Plus / Minus

                                                                        
Query: 556  accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2286 accggtaccgcatgctccagacctgagatgtgccgatgtcctcaatggggatcgagatgc 2227

                                                              
Query: 616  cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
            ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2226 cgtcccccgtcttgagctccggcaggtgagtctccgcttccttctgaaac 2177



 Score =  107 bits (54), Expect = 5e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                        
Query: 434  atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
            ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3130 atatttgcctgacttgacatcagagtaaagcacgatgaaatcaccctcctgcagctcatt 3071

                              
Query: 494  cgagcgaacgaagtcacc 511
             || ||||| ||||||||
Sbjct: 3070 ggaccgaacaaagtcacc 3053



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                              
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 556
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2956 tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 2907
to top
>gb|DQ416754.1| Avena fatua clone 2 viviparous 1 mRNA, partial cds
          Length = 1279

 Score =  317 bits (160), Expect = 3e-83
 Identities = 259/292 (88%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1152 cctttctctagactgccatgcttctgcttcgctagatcctgcggcggtcttaccttcaca 1093

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| | ||||||||| || ||||||
Sbjct: 1092 ccacgtatcagatatttgcccgacttgacatctgagtaaatcacgatgaagtcgccctcc 1033

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1032 tgcagctcgtttgagcgaacaaagtccccagtgttctcaaggagatacattctgctcttg 973

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 972  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 913

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 912  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 861



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                        
Query: 257  caccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtgggga 316
            ||||||||||||||||||||| || |||||||||||||| ||||  |||||||| || ||
Sbjct: 1279 caccgccatctggttcatggacgcagcctcctggcgagaccgcctaacgccgtgcggaga 1220

                              
Query: 317  cttctccttgcagccgcc 334
            |||| |||||||||||||
Sbjct: 1219 cttccccttgcagccgcc 1202
to top
>gb|DQ416753.1| Avena fatua clone 1 viviparous 1 mRNA, partial cds
          Length = 1282

 Score =  317 bits (160), Expect = 3e-83
 Identities = 259/292 (88%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1151 cctttctctagactgccatgcttctgcttcgctagatcctgcggcggtcttaccttcaca 1092

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| | ||||||||| || ||||||
Sbjct: 1091 ccacgtatcagatatttgcccgacttgacatctgagtaaatcacgatgaagtcgccctcc 1032

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1031 tgcagctcgtttgagcgaacaaagtccccagtgttctcaaggagatacattctgctcttg 972

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 971  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 912

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 911  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 860



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                        
Query: 253  tgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtg 312
            ||||||||||||||||||||||||| || |||||||||||||| ||||  |||||||| |
Sbjct: 1282 tgctcaccgccatctggttcatggacgcagcctcctggcgagaccgcctaacgccgtgcg 1223

                                  
Query: 313  gggacttctccttgcagccgcc 334
            | |||||| |||||||||||||
Sbjct: 1222 gagacttccccttgcagccgcc 1201
to top
>emb|AJ001140.1|AFJ001140 Avena fatua mRNA for VIVIPAROUS 1 homologue transcription factor
          Length = 2336

 Score =  317 bits (160), Expect = 3e-83
 Identities = 259/292 (88%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1915 cctttctctagactgccatgcttctgcttcgctagatcctgcggcggtcttaccttcaca 1856

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| | ||||||||| || ||||||
Sbjct: 1855 ccacgtatcagatatttgcccgacttgacatctgagtaaatcacgatgaagtcgccctcc 1796

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1795 tgcagctcgtttgagcgaacaaagtccccagtgttctcaaggagatacattctgctcttg 1736

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 1735 ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 1676

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 1675 gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 1624



 Score =  119 bits (60), Expect = 1e-23
 Identities = 148/173 (85%), Gaps = 7/173 (4%)
 Strand = Plus / Minus

                                                                        
Query: 162  agagatcgatttgatcatcatcagcaggtatacttgagctagctaagtagtcttcaatgg 221
            |||||||||||||||||||| || || ||||||  |||||||||||||   |||||||||
Sbjct: 2130 agagatcgatttgatcatcaacatcatgtatacacgagctagctaagt---cttcaatgg 2074

                                                                        
Query: 222  tggatcagaccacaagtctgttcatttcaaatgctcaccgccatctggttcatggaggcg 281
            |||||| | | |   | |||||| ||||| |||||||||||||||||||||||||| || 
Sbjct: 2073 tggatc-gtctag--ggctgttc-tttcagatgctcaccgccatctggttcatggacgca 2018

                                                                 
Query: 282  gcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgcc 334
            |||||||||||||| ||||  |||||||| || |||||| |||||||||||||
Sbjct: 2017 gcctcctggcgagaccgcctaacgccgtgcggagacttccccttgcagccgcc 1965
to top
>gb|DQ416763.1| Avena fatua clone 11 viviparous 1 mRNA, partial cds
          Length = 1332

 Score =  309 bits (156), Expect = 6e-81
 Identities = 258/292 (88%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1174 cctttctctagactgccatgcttctgcttcgctagatcctgcggcggtcttaccttcaca 1115

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| | ||||||||| || ||||||
Sbjct: 1114 ccacgtatcagatatttgcccgacttgacatctgagtaaatcacgatgaagtcgccctcc 1055

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||| ||||
Sbjct: 1054 tgcagctcgtttgagcgaacaaagtccccagtgttctcaaggagatacattctgcgcttg 995

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 994  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 935

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 934  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 883



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 246  tttcaaatgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacg 305
            ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||  |||
Sbjct: 1312 tttcagatgctcaccgccatctggttcatggacgcagcctcctggcgagaccgcctaacg 1253

                                         
Query: 306  ccgtgtggggacttctccttgcagccgcc 334
            ||||| || |||||| |||||||||||||
Sbjct: 1252 ccgtgcggagacttccccttgcagccgcc 1224
to top
>gb|DQ416757.1| Avena fatua clone 5 truncated viviparous 1 mRNA, partial cds
          Length = 1288

 Score =  307 bits (155), Expect = 2e-80
 Identities = 266/303 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1162 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1103

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1102 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1043

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1042 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 983

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 982  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 923

                                                                        
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgcttacttctga 662
            ||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 922  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgcttccttctga 863

               
Query: 663  aac 665
            |||
Sbjct: 862  aac 860



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                        
Query: 263  catctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtggggacttctc 322
            ||||||||||||||| || |||||||||||||| |||| ||||||||| || |||||| |
Sbjct: 1286 catctggttcatggacgcagcctcctggcgagaccgcctgacgccgtgcggagacttccc 1227

                        
Query: 323  cttgcagccgcc 334
            ||||||||||||
Sbjct: 1226 cttgcagccgcc 1215
to top
>gb|DQ416762.1| Avena fatua clone 10 viviparous 1 mRNA, partial cds
          Length = 1335

 Score =  293 bits (148), Expect = 4e-76
 Identities = 256/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1174 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1115

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1114 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1055

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1054 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 995

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 994  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 935

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 934  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 883



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 246  tttcaaatgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacg 305
            ||||| |||||||||| ||||||||||||||| || |||||||||||||| |||| ||||
Sbjct: 1315 tttcatatgctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacg 1256

                                         
Query: 306  ccgtgtggggacttctccttgcagccgcc 334
            ||||| || |||||| |||||||||||||
Sbjct: 1255 ccgtgcggagacttccccttgcagccgcc 1227
to top
>gb|DQ416759.1| Avena fatua clone 7 viviparous 1 mRNA, partial cds
          Length = 1283

 Score =  293 bits (148), Expect = 4e-76
 Identities = 256/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1150 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1091

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1090 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1031

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1030 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 971

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 970  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 911

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 910  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 859



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                        
Query: 254  gctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtgg 313
            |||||||| ||||||||||||||| || |||||||||||||| |||| ||||||||| ||
Sbjct: 1283 gctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacgccgtgcgg 1224

                                 
Query: 314  ggacttctccttgcagccgcc 334
             |||||| |||||||||||||
Sbjct: 1223 agacttccccttgcagccgcc 1203
to top
>gb|DQ416758.1| Avena fatua clone 6 viviparous 1 mRNA, partial cds
          Length = 1285

 Score =  293 bits (148), Expect = 4e-76
 Identities = 256/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1152 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1093

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1092 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1033

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1032 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 973

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 972  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 913

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 912  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 861



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                        
Query: 254  gctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtgg 313
            |||||||| ||||||||||||||| || |||||||||||||| |||| ||||||||| ||
Sbjct: 1285 gctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacgccgtgcgg 1226

                                 
Query: 314  ggacttctccttgcagccgcc 334
             |||||| |||||||||||||
Sbjct: 1225 agacttccccttgcagccgcc 1205
to top
>gb|DQ416756.1| Avena fatua clone 4 viviparous 1 mRNA, partial cds
          Length = 1287

 Score =  293 bits (148), Expect = 4e-76
 Identities = 256/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1153 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1094

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1093 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1034

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1033 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 974

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 973  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 914

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 913  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 862



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                        
Query: 253  tgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtg 312
            ||||||||| ||||||||||||||| || |||||||||||||| |||| ||||||||| |
Sbjct: 1287 tgctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacgccgtgcg 1228

                                  
Query: 313  gggacttctccttgcagccgcc 334
            | |||||| |||||||||||||
Sbjct: 1227 gagacttccccttgcagccgcc 1206
to top
>gb|DQ416755.1| Avena fatua clone 3 viviparous 1 mRNA, partial cds
          Length = 1282

 Score =  293 bits (148), Expect = 4e-76
 Identities = 256/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1149 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1090

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1089 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1030

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1029 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 970

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 969  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 910

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 909  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 858



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                        
Query: 254  gctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtgg 313
            |||||||| ||||||||||||||| || |||||||||||||| |||| ||||||||| ||
Sbjct: 1282 gctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacgccgtgcgg 1223

                                 
Query: 314  ggacttctccttgcagccgcc 334
             |||||| |||||||||||||
Sbjct: 1222 agacttccccttgcagccgcc 1202
to top
>gb|DQ416764.1| Avena fatua clone 12 viviparous 1 mRNA, partial cds
          Length = 1193

 Score =  285 bits (144), Expect = 9e-74
 Identities = 255/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1174 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1115

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||||||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1114 ccacgtatcagatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1055

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||| | ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1054 tgcaactcgtttgaccgagcaaagtccccagtgttctcaaggagatacattctgctcttg 995

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 994  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 935

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 934  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 883
to top
>gb|DQ416761.1| Avena fatua clone 9 viviparous 1 mRNA, partial cds
          Length = 1335

 Score =  285 bits (144), Expect = 9e-74
 Identities = 255/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1174 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1115

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || |||||||||| |||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1114 ccacgtatcagatttttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1055

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1054 tgcaactcgtttgaccgaacaaagtccccagtgttctcaaggagatacattctgctcttg 995

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 994  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 935

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 934  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 883



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 246  tttcaaatgctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacg 305
            ||||| |||||||||| ||||||||||||||| || |||||||||||||| |||| ||||
Sbjct: 1315 tttcatatgctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacg 1256

                                         
Query: 306  ccgtgtggggacttctccttgcagccgcc 334
            ||||| || |||||| |||||||||||||
Sbjct: 1255 ccgtgcggagacttccccttgcagccgcc 1227
to top
>gb|DQ416760.1| Avena fatua clone 8 viviparous 1 mRNA, partial cds
          Length = 1285

 Score =  285 bits (144), Expect = 9e-74
 Identities = 255/292 (87%)
 Strand = Plus / Minus

                                                                        
Query: 363  cctttctctggactgccattcttgtgcttggccagttcctgtgcggctcttaccttcacg 422
            ||||||||| ||||||||| ||| ||||| || || ||||| |  | |||||||||||| 
Sbjct: 1152 cctttctctagactgccatgcttctgcttcgctagatcctggggaggtcttaccttcaca 1093

                                                                        
Query: 423  ccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaatcaccctcc 482
            || ||||||| ||||||||| ||||| ||||| ||||| |  |||||||| || ||||||
Sbjct: 1092 ccacgtatcaaatatttgcccgacttgacatctgagtaaattacgatgaagtcgccctcc 1033

                                                                        
Query: 483  tgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacattctgctcttg 542
            |||| ||| || || ||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1032 tgcaactcgtttgaccgaacaaagtctccagtgttctcaaggagatacattctgctcttg 973

                                                                        
Query: 543  ttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatgtcctcaatg 602
            ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 972  ttgttaggccaaaaccggtaccgcatgctccagacccgagaggtgccgatgtcctccatg 913

                                                                
Query: 603  gggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctccgctt 654
            ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 912  gggatggagatgccgtccctcgtcttgagctccggcaggtgcgtctccgctt 861



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                        
Query: 254  gctcaccgccatctggttcatggaggcggcctcctggcgagatcgccggacgccgtgtgg 313
            |||||||| ||||||||||||||| || |||||||||||||| |||| ||||||||| ||
Sbjct: 1285 gctcaccgtcatctggttcatggacgcagcctcctggcgagaccgcctgacgccgtgcgg 1226

                                 
Query: 314  ggacttctccttgcagccgcc 334
             |||||| |||||||||||||
Sbjct: 1225 agacttccccttgcagccgcc 1205
to top
>gb|M60214.1|MZEREGPRO Zea mays viviparous-1 mRNA, complete cds
          Length = 2456

 Score =  246 bits (124), Expect = 8e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                        
Query: 411  cttaccttcacgccccgtatcagatatttgcctgactttacatcggagtagagcacgatg 470
            |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||
Sbjct: 1928 cttaccttcacgccccgtatcagatatttgcccgacttgacatcggagtagatcactatg 1869

                                                                        
Query: 471  aaatcaccctcctgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatac 530
            ||||| |||||||| ||||| || || ||||| || || || ||||| || || ||||||
Sbjct: 1868 aaatccccctcctgaagctcgttggaacgaacaaattcccctgtgttttccagcagatac 1809

                                                                        
Query: 531  attctgctcttgttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccg 590
            |||||||||||||||||||||||||||| |||||||||| |||||||  | || || |||
Sbjct: 1808 attctgctcttgttgttgggccaaaacctgtaccgcatgttccacacgcgcgacgttccg 1749

                                                                        
Query: 591  atgtcctcaatggggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctcc 650
            |||||||| |||||||| |||||||| |||| |||||| |||||||||||||||  ||||
Sbjct: 1748 atgtcctccatggggatggagatgccatccctcgtcttcagctccggcaggtgaacctcc 1689

                
Query: 651  gctt 654
            ||||
Sbjct: 1688 gctt 1685



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 246  tttcaaatgctcaccgccatctggttcatgg 276
            ||||| |||||||||||||||||| ||||||
Sbjct: 2150 tttcagatgctcaccgccatctggctcatgg 2120
to top
>ref|NM_189891.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2187

 Score =  244 bits (123), Expect = 3e-61
 Identities = 204/231 (88%)
 Strand = Plus / Minus

                                                                        
Query: 414  accttcacgccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaa 473
            |||||||| || ||||||||||||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 1913 accttcacaccacgtatcagatatttgcctgacttgatatcggagtagatcacaatgaaa 1854

                                                                        
Query: 474  tcaccctcctgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacatt 533
            ||||||||||||||||| || || ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 1853 tcaccctcctgcagctcgtttgaacgaacaaaatcacctgtgttttcgagaagatacatc 1794

                                                                        
Query: 534  ctgctcttgttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatg 593
            ||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 1793 ctgcttttgttgttgggccaaaaccggtaccgcatgttccacacctgagacgtcccgatg 1734

                                                               
Query: 594  tcctcaatggggatcgagatgccgtcccccgtcttgagctccggcaggtga 644
            || || |||||||| ||||  || |||| |||||| |||||||||||||||
Sbjct: 1733 tcttccatggggatggagacaccatccctcgtcttcagctccggcaggtga 1683



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                      
Query: 278  ggcggcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgccg 335
            |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 2148 ggcggcctcctggcgagaacgccgcacgccgtgcggggacttgcccttgcagccgccg 2091
to top
>dbj|AK105441.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-A06, full
            insert sequence
          Length = 2474

 Score =  244 bits (123), Expect = 3e-61
 Identities = 204/231 (88%)
 Strand = Plus / Minus

                                                                        
Query: 414  accttcacgccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaa 473
            |||||||| || ||||||||||||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 1907 accttcacaccacgtatcagatatttgcctgacttgatatcggagtagatcacaatgaaa 1848

                                                                        
Query: 474  tcaccctcctgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacatt 533
            ||||||||||||||||| || || ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 1847 tcaccctcctgcagctcgtttgaacgaacaaaatcacctgtgttttcgagaagatacatc 1788

                                                                        
Query: 534  ctgctcttgttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatg 593
            ||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 1787 ctgcttttgttgttgggccaaaaccggtaccgcatgttccacacctgagacgtcccgatg 1728

                                                               
Query: 594  tcctcaatggggatcgagatgccgtcccccgtcttgagctccggcaggtga 644
            || || |||||||| ||||  || |||| |||||| |||||||||||||||
Sbjct: 1727 tcttccatggggatggagacaccatccctcgtcttcagctccggcaggtga 1677



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                      
Query: 278  ggcggcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgccg 335
            |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 2142 ggcggcctcctggcgagaacgccgcacgccgtgcggggacttgcccttgcagccgccg 2085
to top
>dbj|AK073805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I02, full
            insert sequence
          Length = 2504

 Score =  244 bits (123), Expect = 3e-61
 Identities = 204/231 (88%)
 Strand = Plus / Minus

                                                                        
Query: 414  accttcacgccccgtatcagatatttgcctgactttacatcggagtagagcacgatgaaa 473
            |||||||| || ||||||||||||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 1952 accttcacaccacgtatcagatatttgcctgacttgatatcggagtagatcacaatgaaa 1893

                                                                        
Query: 474  tcaccctcctgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatacatt 533
            ||||||||||||||||| || || ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 1892 tcaccctcctgcagctcgtttgaacgaacaaaatcacctgtgttttcgagaagatacatc 1833

                                                                        
Query: 534  ctgctcttgttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccgatg 593
            ||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 1832 ctgcttttgttgttgggccaaaaccggtaccgcatgttccacacctgagacgtcccgatg 1773

                                                               
Query: 594  tcctcaatggggatcgagatgccgtcccccgtcttgagctccggcaggtga 644
            || || |||||||| ||||  || |||| |||||| |||||||||||||||
Sbjct: 1772 tcttccatggggatggagacaccatccctcgtcttcagctccggcaggtga 1722



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                      
Query: 278  ggcggcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgccg 335
            |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 2187 ggcggcctcctggcgagaacgccgcacgccgtgcggggacttgcccttgcagccgccg 2130
to top
>gb|AY110818.1| Zea mays CL1869_-1 mRNA sequence
          Length = 2456

 Score =  224 bits (113), Expect = 3e-55
 Identities = 210/244 (86%)
 Strand = Plus / Minus

                                                                        
Query: 411  cttaccttcacgccccgtatcagatatttgcctgactttacatcggagtagagcacgatg 470
            |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||
Sbjct: 1928 cttaccttcacgccccgtatcagatatttgcccgacttgacatcggagtagatcactatg 1869

                                                                        
Query: 471  aaatcaccctcctgcagctcattcgagcgaacgaagtcaccagtgttctctagaagatac 530
            ||||     ||||| ||||| || || ||||| || || || ||||| || || ||||||
Sbjct: 1868 aaatnnnnntcctgaagctcgttggaacgaacaaattcccctgtgttttccagcagatac 1809

                                                                        
Query: 531  attctgctcttgttgttgggccaaaaccggtaccgcatgctccacacctgagatgtgccg 590
            |||||||||||||||||||||||||||| |||||||||| |||||||  | || || |||
Sbjct: 1808 attctgctcttgttgttgggccaaaacctgtaccgcatgttccacacgcgcgacgttccg 1749

                                                                        
Query: 591  atgtcctcaatggggatcgagatgccgtcccccgtcttgagctccggcaggtgagtctcc 650
            |||||||| |||||||| |||||||| |||| |||||| |||||||||||||||  ||||
Sbjct: 1748 atgtcctccatggggatggagatgccatccctcgtcttcagctccggcaggtgaacctcc 1689

                
Query: 651  gctt 654
            ||||
Sbjct: 1688 gctt 1685



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 246  tttcaaatgctcaccgccatctggttcatgg 276
            ||||| |||||||||||||||||| ||||||
Sbjct: 2150 tttcagatgctcaccgccatctggctcatgg 2120
to top
>emb|AJ279200.1|ETE279200 Eragrostis tef partial mRNA for transcription factor (vp1 gene)
          Length = 276

 Score =  192 bits (97), Expect = 1e-45
 Identities = 186/217 (85%)
 Strand = Plus / Minus

                                                                       
Query: 438 ttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcattcgag 497
           ||||| ||||| ||||| ||||||| ||| |||||||| ||||| || ||||||||  ||
Sbjct: 276 ttgcccgacttgacatcagagtagatcacaatgaaatccccctcttgaagctcattgtag 217

                                                                       
Query: 498 cgaacgaagtcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaac 557
           ||||| || || ||||||||||||| ||||||||| |||||||||||||| ||||| |||
Sbjct: 216 cgaacraaatcgccagtgttctctaaaagatacatcctgctcttgttgttcggccagaac 157

                                                                       
Query: 558 cggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgccg 617
           | |||||||||| |||| ||| | |||| ||| |||||||| || ||||| |||||||| 
Sbjct: 156 ctgtaccgcatgttccamacccgcgatgagccaatgtcctccatcgggatggagatgcca 97

                                                
Query: 618 tcccccgtcttgagctccggcaggtgagtctccgctt 654
           |||| |||||| ||||||||||||||| |||||||||
Sbjct: 96  tccctcgtcttcagctccggcaggtgaatctccgctt 60
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                            
Query: 556      accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
                |||||||||||||| ||||||||||||| || |||||||| || |||||||| ||||  |
Sbjct: 39717951 accggtaccgcatgttccacacctgagacgtcccgatgtcttccatggggatggagacac 39718010

                                                                  
Query: 616      cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
                | |||| |||||| |||||||||||||||  ||| |||| ||||||||||
Sbjct: 39718011 catccctcgtcttcagctccggcaggtgaacctctgcttccttctgaaac 39718060



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 434      atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
                ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||| ||
Sbjct: 39717256 atatttgcctgacttgatatcggagtagatcacaatgaaatcaccctcctgcagctcgtt 39717315

                                  
Query: 494      cgagcgaacgaagtcacc 511
                 || ||||| || |||||
Sbjct: 39717316 tgaacgaacaaaatcacc 39717333



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                          
Query: 278      ggcggcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgccg 335
                |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 39716762 ggcggcctcctggcgagaacgccgcacgccgtgcggggacttgcccttgcagccgccg 39716819



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 507      tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
                ||||| ||||| || ||||||||||| ||||| |||||||||||||||||||
Sbjct: 39717448 tcacctgtgttttcgagaagatacatcctgcttttgttgttgggccaaaacc 39717499



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 527      atacattctgctcttgttgttgggccaa 554
                |||||| |||||||||||||||||||||
Sbjct: 29635276 atacatcctgctcttgttgttgggccaa 29635249
to top
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0470A12
          Length = 185095

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                         
Query: 556   accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
             |||||||||||||| ||||||||||||| || |||||||| || |||||||| ||||  |
Sbjct: 68850 accggtaccgcatgttccacacctgagacgtcccgatgtcttccatggggatggagacac 68909

                                                               
Query: 616   cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
             | |||| |||||| |||||||||||||||  ||| |||| ||||||||||
Sbjct: 68910 catccctcgtcttcagctccggcaggtgaacctctgcttccttctgaaac 68959



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 434   atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
             ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||| ||
Sbjct: 68155 atatttgcctgacttgatatcggagtagatcacaatgaaatcaccctcctgcagctcgtt 68214

                               
Query: 494   cgagcgaacgaagtcacc 511
              || ||||| || |||||
Sbjct: 68215 tgaacgaacaaaatcacc 68232



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 278   ggcggcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgccg 335
             |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 67661 ggcggcctcctggcgagaacgccgcacgccgtgcggggacttgcccttgcagccgccg 67718



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 507   tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
             ||||| ||||| || ||||||||||| ||||| |||||||||||||||||||
Sbjct: 68347 tcacctgtgttttcgagaagatacatcctgcttttgttgttgggccaaaacc 68398
to top
>dbj|D16640.1|RICOSVP1 Oryza sativa (japonica cultivar-group) DNA for VP1 protein, complete
            cds
          Length = 3743

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                        
Query: 556  accggtaccgcatgctccacacctgagatgtgccgatgtcctcaatggggatcgagatgc 615
            |||||||||||||| ||||||||||||| || |||||||| || |||||||| ||||  |
Sbjct: 2345 accggtaccgcatgttccacacctgagacgtcccgatgtcttccatggggatggagacac 2286

                                                              
Query: 616  cgtcccccgtcttgagctccggcaggtgagtctccgcttacttctgaaac 665
            | |||| |||||| |||||||||||||||  ||| |||| ||||||||||
Sbjct: 2285 catccctcgtcttcagctccggcaggtgaacctctgcttccttctgaaac 2236



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 434  atatttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
            ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||| ||
Sbjct: 3035 atatttgcctgacttgatatcggagtagatcacaatgaaatcaccctcctgcagctcgtt 2976

                              
Query: 494  cgagcgaacgaagtcacc 511
             || ||||| || |||||
Sbjct: 2975 tgaacgaacaaaatcacc 2958



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                      
Query: 278  ggcggcctcctggcgagatcgccggacgccgtgtggggacttctccttgcagccgccg 335
            |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 3529 ggcggcctcctggcgagaacgccgcacgccgtgcggggacttgcccttgcagccgccg 3472



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
            ||||| ||||| || ||||||||||| ||||| |||||||||||||||||||
Sbjct: 2843 tcacctgtgttttcgagaagatacatcctgcttttgttgttgggccaaaacc 2792
to top
>emb|AJ000552.1|CPVP1HOM Craterostigma plantagineum mRNA for VP1 protein homologue
          Length = 2067

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 117/142 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            |||||||| ||||| ||||||||||||||||||||||||||||| | ||| |||||  ||
Sbjct: 1850 gtgttctcgagaaggtacattctgctcttgttgttgggccaaaatctgtaacgcatattc 1791

                                                                        
Query: 573  cacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtcccccgtcttgagc 632
            |||||  | || || || ||||| || |||| || ||| || ||||||| ||||| ||||
Sbjct: 1790 cacacacgcgaagttccaatgtcttccatggcgaccgaaatcccgtccctcgtctcgagc 1731

                                  
Query: 633  tccggcaggtgagtctccgctt 654
            || || || ||| |||||||||
Sbjct: 1730 tcggggagatgaatctccgctt 1709
to top
>dbj|AB015183.1| Mesembryanthemum crystallinum McVp1 mRNA for transcription factor
            Vp1, complete cds
          Length = 2975

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            ||||| || ||||| ||||||||||| |||||||| ||||||||||  || |||||| ||
Sbjct: 2349 gtgttttcaagaaggtacattctgcttttgttgttaggccaaaacctatagcgcatgttc 2290

                                   
Query: 573  cacacctgagatgtgccgatgtc 595
            |||||  |||||||||| |||||
Sbjct: 2289 cacacacgagatgtgccaatgtc 2267
to top
>ref|NM_113376.2| Arabidopsis thaliana ABI3 (ABA INSENSITIVE 3); DNA binding /
            transcription factor/ transcriptional activator AT3G24650
            (ABI3) mRNA, complete cds
          Length = 2965

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            |||||||| || |||||||| ||||| |||||||| |||||||||| ||| |||||| ||
Sbjct: 2438 gtgttctcgaggagatacatcctgcttttgttgttaggccaaaacctgtagcgcatgttc 2379

                                                           
Query: 573  cacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtc 619
            || ||  |||| || |||||||| || ||||  |  |||||||||||
Sbjct: 2378 caaacacgagaggttccgatgtcttccatggccagagagatgccgtc 2332
to top
>dbj|AK220739.1| Arabidopsis thaliana mRNA for abscisic acid-insensitive protein 3,
            complete cds, clone: RAFL22-12-F22
          Length = 2993

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            |||||||| || |||||||| ||||| |||||||| |||||||||| ||| |||||| ||
Sbjct: 2460 gtgttctcgaggagatacatcctgcttttgttgttaggccaaaacctgtagcgcatgttc 2401

                                                           
Query: 573  cacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtc 619
            || ||  |||| || |||||||| || ||||  |  |||||||||||
Sbjct: 2400 caaacacgagaggttccgatgtcttccatggccagagagatgccgtc 2354
to top
>dbj|AK220879.1| Arabidopsis thaliana mRNA for abscisic acid-insensitive protein 3,
            complete cds, clone: RAFL22-43-H23
          Length = 2993

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            |||||||| || |||||||| ||||| |||||||| |||||||||| ||| |||||| ||
Sbjct: 2460 gtgttctcgaggagatacatcctgcttttgttgttaggccaaaacctgtagcgcatgttc 2401

                                                           
Query: 573  cacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtc 619
            || ||  |||| || |||||||| || ||||  |  |||||||||||
Sbjct: 2400 caaacacgagaggttccgatgtcttccatggccagagagatgccgtc 2354
to top
>emb|X68141.1|ATABI3 A.thaliana mRNA for ABI3 protein
          Length = 2868

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            |||||||| || |||||||| ||||| |||||||| |||||||||| ||| |||||| ||
Sbjct: 2324 gtgttctcgaggagatacatcctgcttttgttgttaggccaaaacctgtagcgcatgttc 2265

                                                           
Query: 573  cacacctgagatgtgccgatgtcctcaatggggatcgagatgccgtc 619
            || ||  |||| || |||||||| || ||||  |  |||||||||||
Sbjct: 2264 caaacacgagaggttccgatgtcttccatggccagagagatgccgtc 2218
to top
>emb|AJ003165.1|PTAJ3165 Populus trichocarpa cv. Trichobel ABI3 gene
          Length = 3772

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 556
            ||||||||||| || || |||||||| ||||| |||||||||||||||||
Sbjct: 2376 tcaccagtgttttcgaggagatacatcctgcttttgttgttgggccaaaa 2327
to top
>ref|XM_474341.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1302

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 527  atacattctgctcttgttgttgggccaaaaccggtac 563
            ||||||||||||||||||||||||||| |||| ||||
Sbjct: 1080 atacattctgctcttgttgttgggccagaacctgtac 1044
to top
>emb|AJ131113.1|CNO131113 Chamaecyparis nootkatensis mRNA for VP1/ABI3-like protein
          Length = 2901

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 456  gagtagagcacgatgaaatcaccctcctgcagctcattcgagcgaacgaagtcaccagtg 515
            ||||| || |||||||| || |||||||||||  |||| || |  || || |||||||| 
Sbjct: 2426 gagtatagtacgatgaagtccccctcctgcaggccatttgatctgacaaaatcaccagta 2367

                                                     
Query: 516  ttctctagaagatacattctgctcttgttgttgggccaaaa 556
            || || || |||||||| |||||||| ||||||||||||||
Sbjct: 2366 ttttccagcagatacatcctgctcttattgttgggccaaaa 2326
to top
>emb|AJ003166.1|PTAJ3166 Populus trichocarpa cv. Trichobel ABI3 mRNA
          Length = 2205

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 510  ccagtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
            |||||||| || || |||||||| ||||| |||||||||||||||||||
Sbjct: 1985 ccagtgttttcgaggagatacatcctgcttttgttgttgggccaaaacc 1937
to top
>dbj|AK072874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I07, full
            insert sequence
          Length = 1997

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 527  atacattctgctcttgttgttgggccaaaaccggtac 563
            ||||||||||||||||||||||||||| |||| ||||
Sbjct: 1585 atacattctgctcttgttgttgggccagaacctgtac 1549
to top
>ref|XM_474342.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1515

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 527  atacattctgctcttgttgttgggccaaaacc 558
            ||||||||||||||||||||||||||| ||||
Sbjct: 1293 atacattctgctcttgttgttgggccagaacc 1262
to top
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10,
             complete sequence
          Length = 150206

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 527   atacattctgctcttgttgttgggccaaaacc 558
             ||||||||||||||||||||||||||| ||||
Sbjct: 38050 atacattctgctcttgttgttgggccagaacc 38081



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 527   atacattctgctcttgttgttgggccaaaacc 558
             ||||||||||||||||||||||||||| ||||
Sbjct: 31195 atacattctgctcttgttgttgggccagaacc 31226
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 527      atacattctgctcttgttgttgggccaaaacc 558
                ||||||||||||||||||||||||||| ||||
Sbjct: 34583929 atacattctgctcttgttgttgggccagaacc 34583960



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 527      atacattctgctcttgttgttgggccaaaacc 558
                ||||||||||||||||||||||||||| ||||
Sbjct: 34577074 atacattctgctcttgttgttgggccagaacc 34577105



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                      
Query: 437     tttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctca 491
               |||||| ||||| | ||| ||||||| ||| |||||||||||||||| |||||||
Sbjct: 5121187 tttgccggacttgatatcagagtagatcaccatgaaatcaccctcctacagctca 5121133
to top
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete
             sequence
          Length = 63897

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 527   atacattctgctcttgttgttgggccaaaacc 558
             ||||||||||||||||||||||||||| ||||
Sbjct: 37321 atacattctgctcttgttgttgggccagaacc 37352



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 527   atacattctgctcttgttgttgggccaaaacc 558
             ||||||||||||||||||||||||||| ||||
Sbjct: 30622 atacattctgctcttgttgttgggccagaacc 30653
to top
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
             complete sequence
          Length = 144144

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 437   tttgcctgactttacatcggagtagagcacgatgaaatcaccctcctgcagctca 491
             |||||| ||||| | ||| ||||||| ||| |||||||||||||||| |||||||
Sbjct: 97460 tttgccggacttgatatcagagtagatcaccatgaaatcaccctcctacagctca 97406
to top
>dbj|AB164427.1| Psophocarpus tetragonolobus wbABI3 mRNA for ABI-3 homolog, complete
            cds
          Length = 2537

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggcca 553
            |||||||||||||| || | |||||||||||||||||| || |||||
Sbjct: 2074 tcaccagtgttctcgagcaaatacattctgctcttgttatttggcca 2028
to top
>gb|U28645.1|PVU28645 Phaseolus vulgaris embryo-specific acidic transcriptional activator
            PvAlf mRNA, complete cds
          Length = 2492

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggcca 553
            |||||||||||||| || | |||||||||||| |||||||| |||||
Sbjct: 2073 tcaccagtgttctcgagcatatacattctgcttttgttgtttggcca 2027
to top
>dbj|AB085836.1| Phaseolus vulgaris PvALF mRNA for abscisic acid insensitive 3-like
            factor, complete cds
          Length = 2455

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggcca 553
            |||||||||||||| || | |||||||||||| |||||||| |||||
Sbjct: 2045 tcaccagtgttctcgagcaaatacattctgcttttgttgtttggcca 1999
to top
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete
             sequence
          Length = 121720

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 513   gtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
             |||||||| || | |||||||||||||||||| |||| ||||||||
Sbjct: 47180 gtgttctcgaggacatacattctgctcttgttattggaccaaaacc 47135
to top
>gb|AF400124.1|AF400124 Arabidopsis thaliana LEAFY COTYLEDON 2 gene, complete cds
          Length = 3004

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
            |||||||| || | |||||||||||||||||| |||| ||||||||
Sbjct: 1986 gtgttctcgaggacatacattctgctcttgttattggaccaaaacc 1941
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 452     atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
               ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 4966089 atcggagtagatcactatgaaatcaccctcctacggctcatt 4966130
to top
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0547A06
          Length = 150922

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 452  atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
            ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 3646 atcggagtagatcactatgaaatcaccctcctacggctcatt 3687
to top
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1122_A12
          Length = 149011

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 452    atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
              ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 125343 atcggagtagatcactatgaaatcaccctcctacggctcatt 125384
to top
>emb|AJ309217.1|STU309217 Solanum tuberosum partial mRNA for VP1/ABI3-like protein
          Length = 1089

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 507  tcaccagtgttctctagaagatacattctgctcttgttgttgggccaaaa 556
            ||||| |||||||| ||||| ||||||||||| ||||| || ||||||||
Sbjct: 1052 tcacctgtgttctcgagaaggtacattctgcttttgttatttggccaaaa 1003
to top
>dbj|AK104021.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-D04, full
           insert sequence
          Length = 889

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 452 atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
           ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 858 atcggagtagatcactatgaaatcaccctcctacggctcatt 817
to top
>dbj|AK072453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119K08, full
           insert sequence
          Length = 2293

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 452 atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
           ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 906 atcggagtagatcactatgaaatcaccctcctacggctcatt 865
to top
>dbj|AK071706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112F07, full
           insert sequence
          Length = 1687

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 452 atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
           ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 908 atcggagtagatcactatgaaatcaccctcctacggctcatt 867
to top
>dbj|AK066827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C16, full
           insert sequence
          Length = 929

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 452 atcggagtagagcacgatgaaatcaccctcctgcagctcatt 493
           ||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 900 atcggagtagatcactatgaaatcaccctcctacggctcatt 859
to top
>gb|AF426832.1| Prunus avium ABI3-like transcription factor mRNA, complete cds
          Length = 2576

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            ||||| ||||| |||||||| ||||| || |||||||||||  ||| ||| |||||| ||
Sbjct: 2251 gtgttttctaggagatacatcctgcttttattgttgggccagtacctgtagcgcatgttc 2192

                 
Query: 573  cacac 577
            |||||
Sbjct: 2191 cacac 2187
to top
>ref|NM_102595.2| Arabidopsis thaliana LEC2 (LEAFY COTYLEDON 2); transcription factor
           AT1G28300 (LEC2) mRNA, complete cds
          Length = 1317

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 513 gtgttctctagaagatacattctgctcttgttgttgggccaaaac 557
           |||||||| || | |||||||||||||||||| |||| |||||||
Sbjct: 754 gtgttctcgaggacatacattctgctcttgttattggaccaaaac 710
to top
>gb|AY568668.1| Arabidopsis thaliana leafy cotyledon 2 (LEC2) mRNA, complete cds
          Length = 1089

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 513 gtgttctctagaagatacattctgctcttgttgttgggccaaaac 557
           |||||||| || | |||||||||||||||||| |||| |||||||
Sbjct: 716 gtgttctcgaggacatacattctgctcttgttattggaccaaaac 672
to top
>gb|AF411073.1| Prunus avium viviparous protein (vp1) mRNA, complete cds
          Length = 2640

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 513  gtgttctctagaagatacattctgctcttgttgttgggccaaaaccggtaccgcatgctc 572
            ||||| ||||| |||||||| ||||| || |||||||||||  ||| ||| |||||| ||
Sbjct: 2315 gtgttttctaggagatacatcctgcttttattgttgggccagtacctgtagcgcatgttc 2256

                 
Query: 573  cacac 577
            |||||
Sbjct: 2255 cacac 2251
to top
>gb|DQ446296.1| Arabidopsis thaliana clone pENTR221-At1g28300 transcriptional
           factor B3 family protein/leafy cotyledon 2 (At1g28300)
           mRNA, complete cds
          Length = 1092

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 513 gtgttctctagaagatacattctgctcttgttgttgggccaaaac 557
           |||||||| || | |||||||||||||||||| |||| |||||||
Sbjct: 716 gtgttctcgaggacatacattctgctcttgttattggaccaaaac 672
to top
>emb|AJ630496.1| Arabidopsis thaliana mRNA for hypothetical protein, clone At1g28300
          Length = 1089

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 513 gtgttctctagaagatacattctgctcttgttgttgggccaaaac 557
           |||||||| || | |||||||||||||||||| |||| |||||||
Sbjct: 716 gtgttctcgaggacatacattctgctcttgttattggaccaaaac 672
to top
>gb|AF400123.1|AF400123 Arabidopsis thaliana LEAFY COTYLEDON 2 mRNA, complete cds
          Length = 1332

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 513 gtgttctctagaagatacattctgctcttgttgttgggccaaaac 557
           |||||||| || | |||||||||||||||||| |||| |||||||
Sbjct: 752 gtgttctcgaggacatacattctgctcttgttattggaccaaaac 708
to top
>dbj|AK109920.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-E10, full
           insert sequence
          Length = 1176

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 527 atacattctgctcttgttgttgggccaaaaccggtac 563
           |||||| ||||||||||||||||||||| ||| ||||
Sbjct: 499 atacatcctgctcttgttgttgggccaatacctgtac 463
to top
>ref|NM_191730.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 492

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 527 atacattctgctcttgttgttgggccaa 554
           |||||| |||||||||||||||||||||
Sbjct: 51  atacatcctgctcttgttgttgggccaa 24
to top
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1142C05
          Length = 151457

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 527    atacattctgctcttgttgttgggccaa 554
              |||||| |||||||||||||||||||||
Sbjct: 105096 atacatcctgctcttgttgttgggccaa 105069
to top
>gb|AF145787.1|SBVP1S3 Sorghum bicolor genomic sequence similar to vp1 maize gene
          Length = 450

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 411 cttaccttcacgccccgtatcag 433
           |||||||||||||||||||||||
Sbjct: 448 cttaccttcacgccccgtatcag 426
to top
>gb|AF148560.1|SBISVP3 Sorghum bicolor insertion sequence IS9530 ISVP1 (ISvp1) gene
           sequence
          Length = 379

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 411 cttaccttcacgccccgtatcag 433
           |||||||||||||||||||||||
Sbjct: 377 cttaccttcacgccccgtatcag 355
to top
>dbj|AB099513.1| Fagopyrum esculentum VP1 gene for transcription factor VP-1
            homologue, complete cds
          Length = 3390

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 508  caccagtgttctctagaagatacattctgctcttgttgttgggccaaaacc 558
            ||||||||||||| |  |||||||| |||||||| ||||| ||||| ||||
Sbjct: 2878 caccagtgttctccaagagatacatcctgctcttattgtttggccagaacc 2828
to top
>dbj|AB080195.1| Pisum sativum abi3 mRNA for ABA insensitive 3, complete cds
          Length = 3275

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 504  aagtcaccagtgttctctagaagatacattctgctcttgttgttgggccaa 554
            |||||||||||||| || || | |||||||||||| ||||| || ||||||
Sbjct: 2710 aagtcaccagtgttttcaagcaaatacattctgcttttgttatttggccaa 2660
to top
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 327    cagccgccgtcttcggccttc 347
              |||||||||||||||||||||
Sbjct: 137902 cagccgccgtcttcggccttc 137882
to top
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 342     gccttcacttcggacgctccc 362
               |||||||||||||||||||||
Sbjct: 1259111 gccttcacttcggacgctccc 1259091
to top
>emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-33N16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158838

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   ggacttctccttgcagccgcc 334
             |||||||||||||||||||||
Sbjct: 92527 ggacttctccttgcagccgcc 92547
to top
>ref|XM_606908.2| PREDICTED: Bos taurus similar to CG6451-PA, transcript variant 1
            (LOC528485), mRNA
          Length = 5168

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 473  atcaccctcctgcagctcat 492
            ||||||||||||||||||||
Sbjct: 1302 atcaccctcctgcagctcat 1283
to top
>ref|XM_876920.1| PREDICTED: Bos taurus similar to CG6451-PA, transcript variant 3
           (LOC528485), mRNA
          Length = 4343

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 473 atcaccctcctgcagctcat 492
           ||||||||||||||||||||
Sbjct: 471 atcaccctcctgcagctcat 452
to top
>gb|DQ374087.1| Beta vulgaris chromosome 9 clone BAC33 genomic sequence
          Length = 99090

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 212   tcttcaatggtggatcagaccaca 235
             ||||||||||||||||| ||||||
Sbjct: 57793 tcttcaatggtggatcacaccaca 57770
to top
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence
          Length = 197615

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    ttgcagccgccgtcttcggc 343
              ||||||||||||||||||||
Sbjct: 138294 ttgcagccgccgtcttcggc 138275
to top
>gb|AC112516.2| Homo sapiens chromosome 3 clone RP11-350F11, complete sequence
          Length = 184868

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    tttctctggactgccattct 384
              ||||||||||||||||||||
Sbjct: 157970 tttctctggactgccattct 157951
to top
>gb|AC104438.2| Homo sapiens chromosome 3 clone RP11-757A9, complete sequence
          Length = 175329

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   tttctctggactgccattct 384
             ||||||||||||||||||||
Sbjct: 40736 tttctctggactgccattct 40717
to top
>gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, complete sequence
          Length = 239344

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    tctctagaagatacattctg 536
              ||||||||||||||||||||
Sbjct: 125402 tctctagaagatacattctg 125421
to top
>dbj|AP001883.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-140O23, complete
             sequence
          Length = 143621

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   ggacttctccttgcagccgc 333
             ||||||||||||||||||||
Sbjct: 96507 ggacttctccttgcagccgc 96488
to top
>gb|AC161885.3| Gallus gallus BAC clone CH261-15B19 from chromosome ul, complete
             sequence
          Length = 195749

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   ggactgccattcttgtgctt 391
             ||||||||||||||||||||
Sbjct: 43906 ggactgccattcttgtgctt 43887
to top
>dbj|AB005558.1| Daucus carota mRNA for C-ABI3 protein, complete cds
          Length = 2717

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 411  cttaccttcacgccccgtatcagatatttgcc 442
            ||||||||||| || ||||| |||||||||||
Sbjct: 2233 cttaccttcactcctcgtataagatatttgcc 2202


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,443,586
Number of Sequences: 3902068
Number of extensions: 4443586
Number of successful extensions: 80788
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80467
Number of HSP's gapped (non-prelim): 312
length of query: 665
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 642
effective length of database: 17,143,297,704
effective search space: 11005997125968
effective search space used: 11005997125968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top