ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18b14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009284.1| Triticum aestivum clone wlm0.pk0008.d11:fis, full... 813 0.0
2dbj|AK104914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
3dbj|AK102926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
4dbj|AK072491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
5gb|AY107662.1| Zea mays PCO088318 mRNA sequence 258 2e-65
6gb|AY105418.1| Zea mays PCO088319 mRNA sequence 216 7e-53
7gb|BT018178.1| Zea mays clone EL01N0557G02.c mRNA sequence 184 2e-43
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
10ref|NM_206764.1| Drosophila melanogaster RNA-binding protein 2 C... 50 0.009
11ref|NM_167522.2| Drosophila melanogaster RNA-binding protein 2 C... 50 0.009
12ref|NM_080220.2| Drosophila melanogaster RNA-binding protein 2 C... 50 0.009
13gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, r... 50 0.009
14gb|BT024190.1| Drosophila melanogaster RH12113 full insert cDNA 50 0.009
15gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 ... 50 0.009
16gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswe... 46 0.14
17gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75... 46 0.14
18gb|BC044408.1| Danio rerio chondroitin sulfate proteoglycan 6 (b... 44 0.56
19gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosom... 44 0.56
20ref|NM_214689.1| Danio rerio chondroitin sulfate proteoglycan 6 ... 44 0.56
21ref|XM_697619.1| PREDICTED: Danio rerio hypothetical protein LOC... 44 0.56
22emb|BX649552.3| Zebrafish DNA sequence from clone CH211-91I13 in... 44 0.56
23emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 44 0.56
24ref|NM_125019.3| Arabidopsis thaliana calmodulin binding AT5G563... 42 2.2
25gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome ... 42 2.2
26gb|BT012059.1| Arabidopsis thaliana At5g56360 mRNA sequence 42 2.2
27gb|AC115742.13| Mus musculus chromosome 7, clone RP23-477E13, co... 42 2.2
28gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, com... 42 2.2
29gb|AY091700.1| Arabidopsis thaliana AT5g56360/MCD7_9 mRNA, compl... 42 2.2
30gb|AC116310.2| Homo sapiens chromosome 5 clone RP11-203E6, compl... 42 2.2
31dbj|AK148121.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len... 42 2.2
32gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, comp... 42 2.2
33gb|AY048226.1| Arabidopsis thaliana AT5g56360/MCD7_9 mRNA, compl... 42 2.2
34ref|NM_001034868.1| Mus musculus MAS-related GPR, member X2 (Mrg... 42 2.2
35gb|AC104088.6| Homo sapiens BAC clone RP11-744C22 from 2, comple... 42 2.2
36gb|AY086076.1| Arabidopsis thaliana clone 21044 mRNA, complete s... 42 2.2
37gb|AC110551.9| Mus musculus chromosome 7, clone RP23-245P16, com... 42 2.2
38gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
39gb|AC151968.3| Mus musculus BAC clone RP24-247B20 from chromosom... 40 8.7
40ref|XM_425959.1| PREDICTED: Gallus gallus similar to hypothetica... 40 8.7
41gb|U41553.1| Caenorhabditis elegans cosmid ZK1193, complete sequ... 40 8.7
42gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosom... 40 8.7
43emb|AL591585.7| Human DNA sequence from clone RP11-442E4 on chro... 40 8.7
44gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complet... 40 8.7
45emb|AL110740.1|CNS018SD Botrytis cinerea strain T4 cDNA library 40 8.7
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
47gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Canc... 40 8.7
48gb|AC107419.3| Homo sapiens X BAC RP11-241K4 (Roswell Park Cance... 40 8.7
49ref|XM_340807.2| PREDICTED: Rattus norvegicus obscurin, cytoskel... 40 8.7
50dbj|AB062506.2| Methylobacillus sp. 12S exopolysaccharide biosyn... 40 8.7
51gb|AC007618.21| Homo sapiens 12 BAC RP11-885B4 (Roswell Park Can... 40 8.7
52emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chro... 40 8.7
53gb|AC005785.1|AC005785 Homo sapiens chromosome 19, cosmid R33907... 40 8.7
54gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosom... 40 8.7
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
56emb|AL929273.8| Mouse DNA sequence from clone RP23-348N10 on chr... 40 8.7 
>gb|BT009284.1| Triticum aestivum clone wlm0.pk0008.d11:fis, full insert mRNA
           sequence
          Length = 732

 Score =  813 bits (410), Expect = 0.0
 Identities = 580/630 (92%), Gaps = 15/630 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataactgataagttacaaacagaaggcttagtctctttc-gatgacctacataaacaat 59
           |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 630 cataactgataagttacaaacagaaggcttggtctctttcagatgacctagataaacaat 571

                                                                       
Query: 60  ttgaagaaacgtct-tcaaaggaagctaaagtaaaagatatccagttgcagctactagca 118
           |||| ||||||||  |||||||||   |||| |||||||| ||||||||||||||||  |
Sbjct: 570 ttgaggaaacgtccgtcaaaggaactaaaagaaaaagatacccagttgcagctacta--a 513

                                                                       
Query: 119 aatcaggacgatgtgaaaatttcaaccatctgaccactttgctcaaaaaattccctagcc 178
           |||||||| ||||||||||||||||||||  |||||||||||||||||  ||||||||||
Sbjct: 512 aatcaggatgatgtgaaaatttcaaccattcgaccactttgctcaaaattttccctagcc 453

                                                                       
Query: 179 aaactaaagctgctttggcggctac--tcacaacaccaggcttttctatccagcatgcat 236
           | ||||| |||||||||||||||||  ||||| | ||||||||||||||| | |   || 
Sbjct: 452 agactaacgctgctttggcggctacactcacagctccaggcttttctatctatc---cac 396

                                                                       
Query: 237 ctctgtagcc----tttcttatggttatatggttgtaatagtggagtcaatgtttcctcg 292
           ||| ||||||    ||||||||||||||  ||||||||||||||||||| ||||||||||
Sbjct: 395 ctcggtagccgttctttcttatggttat--ggttgtaatagtggagtcattgtttcctcg 338

                                                                       
Query: 293 tgacagtttagagctcgtcatggccagacagttctgaagacgcagcgtcgagtttctgtt 352
           ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 337 tgacagtttagagctcgtcgtggccggacaggtctgaagacgcagcgtcgagtttctgtt 278

                                                                       
Query: 353 gcagctccttcagcttctcttcaatgcacattgcaggagttgacagtacagcgacatact 412
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 277 gcagctccttcagcttctcttcaacacacattgcaggagttgacagtacagcgacatact 218

                                                                       
Query: 413 cgcatctgctgggctcatcgacaccattaagctcgttgcttagcccacatctaagcctca 472
           ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
Sbjct: 217 cgcatctgctgggctcatcgacaccgttaagctcgttgctcagcccacatctaagcctga 158

                                                                       
Query: 473 cctttaggcttcggtcagggccattccagcatttgtctccatttgcaaagtgcatcatcc 532
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 157 cctttaggcttcggtcagggccattccagcatttgtctccatttgaaaagtgcatcatcc 98

                                                                       
Query: 533 tgtatgattcttcaaatttgtcccagcgccccaggttggtggaactgtgtccttcaacct 592
           || | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 97  tgcaggattcttcaaatttgtcccagcgccccaggttagtggaactgtgtccttcaacct 38

                                         
Query: 593 gtgaagctttcttgtatggacagaccttgt 622
           ||||||||||||||||||||||||||||||
Sbjct: 37  gtgaagctttcttgtatggacagaccttgt 8
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>dbj|AK104914.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C10, full
           insert sequence
          Length = 908

 Score =  283 bits (143), Expect = 3e-73
 Identities = 215/239 (89%)
 Strand = Plus / Minus

                                                                       
Query: 399 tacagcgacatactcgcatctgctgggctcatcgacaccattaagctcgttgcttagccc 458
           |||||| |||||||||||||| || |||||||||||||||||||| || ||| | |||||
Sbjct: 397 tacagccacatactcgcatctactaggctcatcgacaccattaagttcattgttcagccc 338

                                                                       
Query: 459 acatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctccatttgc 518
            |||| |||||| |||||||| |||||||||||||||||||||||| |||||||||||| 
Sbjct: 337 gcatcgaagcctaacctttagacttcggtcagggccattccagcatctgtctccatttga 278

                                                                       
Query: 519 aaagtgcatcatcctgtatgattcttcaaatttgtcccagcgccccaggttggtggaact 578
           ||| ||||| |  ||||| |||||||||||||||||||||||||||||| |||||| |||
Sbjct: 277 aaattgcattactctgtaggattcttcaaatttgtcccagcgccccaggctggtggtact 218

                                                                      
Query: 579 gtgtccttcaacctgtgaagctttcttgtatggacagaccttgtaaacatacttgccct 637
            |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 217 atgtccttcaacctgcgaagctttcttgaatggacataccttgtaaacatacttgccct 159
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>dbj|AK102926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114E08, full
            insert sequence
          Length = 2340

 Score =  283 bits (143), Expect = 3e-73
 Identities = 215/239 (89%)
 Strand = Plus / Minus

                                                                        
Query: 399  tacagcgacatactcgcatctgctgggctcatcgacaccattaagctcgttgcttagccc 458
            |||||| |||||||||||||| || |||||||||||||||||||| || ||| | |||||
Sbjct: 1885 tacagccacatactcgcatctactaggctcatcgacaccattaagttcattgttcagccc 1826

                                                                        
Query: 459  acatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctccatttgc 518
             |||| |||||| |||||||| |||||||||||||||||||||||| |||||||||||| 
Sbjct: 1825 gcatcgaagcctaacctttagacttcggtcagggccattccagcatctgtctccatttga 1766

                                                                        
Query: 519  aaagtgcatcatcctgtatgattcttcaaatttgtcccagcgccccaggttggtggaact 578
            ||| ||||| |  ||||| |||||||||||||||||||||||||||||| |||||| |||
Sbjct: 1765 aaattgcattactctgtaggattcttcaaatttgtcccagcgccccaggctggtggtact 1706

                                                                       
Query: 579  gtgtccttcaacctgtgaagctttcttgtatggacagaccttgtaaacatacttgccct 637
             |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 1705 atgtccttcaacctgcgaagctttcttgaatggacataccttgtaaacatacttgccct 1647
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>dbj|AK072491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131J23, full
           insert sequence
          Length = 902

 Score =  283 bits (143), Expect = 3e-73
 Identities = 215/239 (89%)
 Strand = Plus / Minus

                                                                       
Query: 399 tacagcgacatactcgcatctgctgggctcatcgacaccattaagctcgttgcttagccc 458
           |||||| |||||||||||||| || |||||||||||||||||||| || ||| | |||||
Sbjct: 447 tacagccacatactcgcatctactaggctcatcgacaccattaagttcattgttcagccc 388

                                                                       
Query: 459 acatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctccatttgc 518
            |||| |||||| |||||||| |||||||||||||||||||||||| |||||||||||| 
Sbjct: 387 gcatcgaagcctaacctttagacttcggtcagggccattccagcatctgtctccatttga 328

                                                                       
Query: 519 aaagtgcatcatcctgtatgattcttcaaatttgtcccagcgccccaggttggtggaact 578
           ||| ||||| |  ||||| |||||||||||||||||||||||||||||| |||||| |||
Sbjct: 327 aaattgcattactctgtaggattcttcaaatttgtcccagcgccccaggctggtggtact 268

                                                                      
Query: 579 gtgtccttcaacctgtgaagctttcttgtatggacagaccttgtaaacatacttgccct 637
            |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 267 atgtccttcaacctgcgaagctttcttgaatggacataccttgtaaacatacttgccct 209
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>gb|AY107662.1| Zea mays PCO088318 mRNA sequence
          Length = 759

 Score =  258 bits (130), Expect = 2e-65
 Identities = 211/238 (88%)
 Strand = Plus / Minus

                                                                       
Query: 351 ttgcagctccttcagcttctcttcaatgcacattgcaggagttgacagtacagcgacata 410
           ||||||||||||||||||||| || | ||| | ||| || || |||| |||||| |||||
Sbjct: 246 ttgcagctccttcagcttctcctcgacgcagagtgcgggcgtcgacaatacagcaacata 187

                                                                       
Query: 411 ctcgcatctgctgggctcatcgacaccattaagctcgttgcttagcccacatctaagcct 470
           |||||||||||| |||||||| ||  |||||||||| ||||| |||||||||||||||||
Sbjct: 186 ctcgcatctgctaggctcatcaacgtcattaagctcattgctcagcccacatctaagcct 127

                                                                       
Query: 471 cacctttaggcttcggtcagggccattccagcatttgtctccatttgcaaagtgcatcat 530
            |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| | 
Sbjct: 126 aacctttaggcttcggtcaggaccattccagcatttgtctccacttgaaaagtgcattac 67

                                                                     
Query: 531 cctgtatgattcttcaaatttgtcccagcgccccaggttggtggaactgtgtccttca 588
            ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||||||
Sbjct: 66  tctgtacgattcttcaaatttgtcccatctccccaggttggtggaactgtgcccttca 9
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>gb|AY105418.1| Zea mays PCO088319 mRNA sequence
          Length = 1303

 Score =  216 bits (109), Expect = 7e-53
 Identities = 160/177 (90%)
 Strand = Plus / Minus

                                                                        
Query: 448  ttgcttagcccacatctaagcctcacctttaggcttcggtcagggccattccagcatttg 507
            ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1300 ttgctcagcccacatctaagcctaacctttaggcttcggtcaggaccattccagcatttg 1241

                                                                        
Query: 508  tctccatttgcaaagtgcatcatcctgtatgattcttcaaatttgtcccagcgccccagg 567
            ||||||  || ||||||||| |  ||||| |||||||||||||||||||| | |||||||
Sbjct: 1240 tctccacctgaaaagtgcattactctgtacgattcttcaaatttgtcccatctccccagg 1181

                                                                     
Query: 568  ttggtggaactgtgtccttcaacctgtgaagctttcttgtatggacagaccttgtaa 624
            |||||||||||||| |||||| ||||||| |||||||| |||| |||||||||||||
Sbjct: 1180 ttggtggaactgtgcccttcagcctgtgatgctttcttatatgcacagaccttgtaa 1124
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>gb|BT018178.1| Zea mays clone EL01N0557G02.c mRNA sequence
          Length = 828

 Score =  184 bits (93), Expect = 2e-43
 Identities = 138/153 (90%)
 Strand = Plus / Minus

                                                                       
Query: 472 acctttaggcttcggtcagggccattccagcatttgtctccatttgcaaagtgcatcatc 531
           |||||||||||||||||||| |||||||||||||||||||||  || ||||||||| |  
Sbjct: 172 acctttaggcttcggtcaggaccattccagcatttgtctccacctgaaaagtgcattact 113

                                                                       
Query: 532 ctgtatgattcttcaaatttgtcccagcgccccaggttggtggaactgtgtccttcaacc 591
           ||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||| ||
Sbjct: 112 ctgtacgattcttcaaatttgtcccatctccccaggttggtggaactgtgcccttcagcc 53

                                            
Query: 592 tgtgaagctttcttgtatggacagaccttgtaa 624
           ||||| |||||||| |||| |||||||||||||
Sbjct: 52  tgtgatgctttcttatatgcacagaccttgtaa 20



 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 351 ttgcagctccttcagcttctcttcaatgcacattgcaggagttgacagtacagcgacata 410
           ||||||||||||||||||||| |||| ||| | ||| || || |||| |||||| |||||
Sbjct: 373 ttgcagctccttcagcttctcctcaacgcagagtgcgggcgtcgacaatacagccacata 314

                                                                       
Query: 411 ctcgcatctgctgggctcatcgacaccattaagctcgttgcttagcccacatctaagcct 470
           |||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 313 ctcgcatctgctaggctcatcgacatcattaagctcattgctcagcccacatctaagcct 254

                
Query: 471 cacct 475
            ||||
Sbjct: 253 aacct 249
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                           
Query: 471     cacctttaggcttcggtcagggccattccagcatttgtctccatttgcaaagtgcatcat 530
               ||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||| | 
Sbjct: 9702575 cacctttagacttcggtcagggccattccagcatctgtctccatttgaaaattgcattac 9702634

                                               
Query: 531     cctgtatgattcttcaaatttgtcccagcgcc 562
                ||||| |||||||||||||||||||||||||
Sbjct: 9702635 tctgtaggattcttcaaatttgtcccagcgcc 9702666



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                           
Query: 561     ccccaggttggtggaactgtgtccttcaacctgtgaagctttcttgtatggacagacctt 620
               ||||||| |||||| ||| |||||||||||||| |||||||||||| ||||||| |||||
Sbjct: 9703026 ccccaggctggtggtactatgtccttcaacctgcgaagctttcttgaatggacatacctt 9703085

                         
Query: 621     gtaaacatac 630
               ||||||||||
Sbjct: 9703086 gtaaacatac 9703095



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 406     acatactcgcatctgctgggctcatcgacaccattaagctcgttgcttagcccacatcta 465
               |||||||||||||| || |||||||||||||||||||| || ||| | ||||| |||| |
Sbjct: 9702404 acatactcgcatctactaggctcatcgacaccattaagttcattgttcagcccgcatcga 9702463

                         
Query: 466     agcctcacct 475
               ||||| ||||
Sbjct: 9702464 agcctaacct 9702473
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>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score =  119 bits (60), Expect = 1e-23
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                          
Query: 471    cacctttaggcttcggtcagggccattccagcatttgtctccatttgcaaagtgcatcat 530
              ||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||| | 
Sbjct: 140578 cacctttagacttcggtcagggccattccagcatctgtctccatttgaaaattgcattac 140637

                                              
Query: 531    cctgtatgattcttcaaatttgtcccagcgcc 562
               ||||| |||||||||||||||||||||||||
Sbjct: 140638 tctgtaggattcttcaaatttgtcccagcgcc 140669



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                          
Query: 561    ccccaggttggtggaactgtgtccttcaacctgtgaagctttcttgtatggacagacctt 620
              ||||||| |||||| ||| |||||||||||||| |||||||||||| ||||||| |||||
Sbjct: 141029 ccccaggctggtggtactatgtccttcaacctgcgaagctttcttgaatggacatacctt 141088

                        
Query: 621    gtaaacatac 630
              ||||||||||
Sbjct: 141089 gtaaacatac 141098



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                          
Query: 406    acatactcgcatctgctgggctcatcgacaccattaagctcgttgcttagcccacatcta 465
              |||||||||||||| || |||||||||||||||||||| || ||| | ||||| |||| |
Sbjct: 140407 acatactcgcatctactaggctcatcgacaccattaagttcattgttcagcccgcatcga 140466

                        
Query: 466    agcctcacct 475
              ||||| ||||
Sbjct: 140467 agcctaacct 140476
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>ref|NM_206764.1| Drosophila melanogaster RNA-binding protein 2 CG4429-RC, transcript
            variant C (Rbp2), mRNA
          Length = 2086

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 346  ttctgttgcagctccttcagcttctcttc 374
            ||||| |||||||||||||||||||||||
Sbjct: 1073 ttctgctgcagctccttcagcttctcttc 1045
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>ref|NM_167522.2| Drosophila melanogaster RNA-binding protein 2 CG4429-RB, transcript
           variant B (Rbp2), mRNA
          Length = 1984

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 346 ttctgttgcagctccttcagcttctcttc 374
           ||||| |||||||||||||||||||||||
Sbjct: 971 ttctgctgcagctccttcagcttctcttc 943
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>ref|NM_080220.2| Drosophila melanogaster RNA-binding protein 2 CG4429-RA, transcript
           variant A (Rbp2), mRNA
          Length = 1987

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 346 ttctgttgcagctccttcagcttctcttc 374
           ||||| |||||||||||||||||||||||
Sbjct: 974 ttctgctgcagctccttcagcttctcttc 946
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>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone
             BACR47D09, complete sequence
          Length = 166935

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 346   ttctgttgcagctccttcagcttctcttc 374
             ||||| |||||||||||||||||||||||
Sbjct: 99971 ttctgctgcagctccttcagcttctcttc 99943
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>gb|BT024190.1| Drosophila melanogaster RH12113 full insert cDNA
          Length = 2647

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 346  ttctgttgcagctccttcagcttctcttc 374
            ||||| |||||||||||||||||||||||
Sbjct: 1072 ttctgctgcagctccttcagcttctcttc 1044
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>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete
              sequence
          Length = 304712

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 346    ttctgttgcagctccttcagcttctcttc 374
              ||||| |||||||||||||||||||||||
Sbjct: 119253 ttctgctgcagctccttcagcttctcttc 119225
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>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer Institute
              Drosophila BAC library) complete sequence
          Length = 168058

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 132    tgaaaatttcaaccatctgacca 154
              |||||||||||||||||||||||
Sbjct: 110538 tgaaaatttcaaccatctgacca 110560
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>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete
              sequence
          Length = 314904

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 132    tgaaaatttcaaccatctgacca 154
              |||||||||||||||||||||||
Sbjct: 207140 tgaaaatttcaaccatctgacca 207162
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>gb|BC044408.1| Danio rerio chondroitin sulfate proteoglycan 6 (bamacan), mRNA (cDNA
            clone MGC:55484 IMAGE:2640458), complete cds
          Length = 4286

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 352  tgcagctccttcagcttctcttcaat 377
            |||||||||||| |||||||||||||
Sbjct: 1233 tgcagctccttctgcttctcttcaat 1208
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>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence
          Length = 206377

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 175    agccaaactaaagctgctttgg 196
              ||||||||||||||||||||||
Sbjct: 132719 agccaaactaaagctgctttgg 132698
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>ref|NM_214689.1| Danio rerio chondroitin sulfate proteoglycan 6 (bamacan) (cspg6),
            mRNA
          Length = 4286

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 352  tgcagctccttcagcttctcttcaat 377
            |||||||||||| |||||||||||||
Sbjct: 1233 tgcagctccttctgcttctcttcaat 1208
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>ref|XM_697619.1| PREDICTED: Danio rerio hypothetical protein LOC554965 (LOC554965),
            mRNA
          Length = 4278

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 352  tgcagctccttcagcttctcttcaat 377
            |||||||||||| |||||||||||||
Sbjct: 1230 tgcagctccttctgcttctcttcaat 1205
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>emb|BX649552.3| Zebrafish DNA sequence from clone CH211-91I13 in linkage group 18,
              complete sequence
          Length = 163544

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 352    tgcagctccttcagcttctcttcaat 377
              |||||||||||| |||||||||||||
Sbjct: 130504 tgcagctccttctgcttctcttcaat 130529
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>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
              complete sequence
          Length = 209223

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 352    tgcagctccttcagcttctcttcaat 377
              |||||||||||| |||||||||||||
Sbjct: 192708 tgcagctccttctgcttctcttcaat 192733
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>ref|NM_125019.3| Arabidopsis thaliana calmodulin binding AT5G56360 mRNA, complete cds
          Length = 2275

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 456  cccacatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctcc 512
            ||||||||| ||  ||||||| |||||||  || || |||||||||||||| |||||
Sbjct: 1829 cccacatcttagtttcaccttcaggcttctatcgggaccattccagcatttttctcc 1773
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>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence
          Length = 234652

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 591    ctgtgaagctttcttgtatgg 611
              |||||||||||||||||||||
Sbjct: 127284 ctgtgaagctttcttgtatgg 127264
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>gb|BT012059.1| Arabidopsis thaliana At5g56360 mRNA sequence
          Length = 1854

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 456  cccacatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctcc 512
            ||||||||| ||  ||||||| |||||||  || || |||||||||||||| |||||
Sbjct: 1692 cccacatcttagtttcaccttcaggcttctatcgggaccattccagcatttttctcc 1636
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>gb|AC115742.13| Mus musculus chromosome 7, clone RP23-477E13, complete sequence
          Length = 186195

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 560    gccccaggttggtggaactgt 580
              |||||||||||||||||||||
Sbjct: 149990 gccccaggttggtggaactgt 149970
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>gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, complete sequence
          Length = 202544

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 560   gccccaggttggtggaactgt 580
             |||||||||||||||||||||
Sbjct: 80793 gccccaggttggtggaactgt 80813
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>gb|AY091700.1| Arabidopsis thaliana AT5g56360/MCD7_9 mRNA, complete cds
          Length = 234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 456 cccacatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctcc 512
           ||||||||| ||  ||||||| |||||||  || || |||||||||||||| |||||
Sbjct: 72  cccacatcttagtttcaccttcaggcttctatcgggaccattccagcatttttctcc 16
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>gb|AC116310.2| Homo sapiens chromosome 5 clone RP11-203E6, complete sequence
          Length = 149704

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    catctctgtagcctttcttat 254
              |||||||||||||||||||||
Sbjct: 113280 catctctgtagcctttcttat 113300
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>dbj|AK148121.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library,
            clone:G370024M05 product:similar to G protein-coupled
            receptor [Mus musculus], full insert sequence
          Length = 4488

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 560  gccccaggttggtggaactgt 580
            |||||||||||||||||||||
Sbjct: 4103 gccccaggttggtggaactgt 4123
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>gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, complete sequence
          Length = 159956

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 234    catctctgtagcctttcttat 254
              |||||||||||||||||||||
Sbjct: 121880 catctctgtagcctttcttat 121860
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>gb|AY048226.1| Arabidopsis thaliana AT5g56360/MCD7_9 mRNA, complete cds
          Length = 894

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 456 cccacatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctcc 512
           ||||||||| ||  ||||||| |||||||  || || |||||||||||||| |||||
Sbjct: 481 cccacatcttagtttcaccttcaggcttctatcgggaccattccagcatttttctcc 425
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>ref|NM_001034868.1| Mus musculus MAS-related GPR, member X2 (Mrgprx2), mRNA
          Length = 4488

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 560  gccccaggttggtggaactgt 580
            |||||||||||||||||||||
Sbjct: 4103 gccccaggttggtggaactgt 4123
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>gb|AC104088.6| Homo sapiens BAC clone RP11-744C22 from 2, complete sequence
          Length = 158746

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 524   gcatcatcctgtatgattctt 544
             |||||||||||||||||||||
Sbjct: 76882 gcatcatcctgtatgattctt 76902
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>gb|AY086076.1| Arabidopsis thaliana clone 21044 mRNA, complete sequence
          Length = 2229

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 456  cccacatctaagcctcacctttaggcttcggtcagggccattccagcatttgtctcc 512
            ||||||||| ||  ||||||| |||||||  || || |||||||||||||| |||||
Sbjct: 1829 cccacatcttagtttcaccttcaggcttctatcgggaccattccagcatttttctcc 1773
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>gb|AC110551.9| Mus musculus chromosome 7, clone RP23-245P16, complete sequence
          Length = 155691

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 560   gccccaggttggtggaactgt 580
             |||||||||||||||||||||
Sbjct: 36592 gccccaggttggtggaactgt 36572
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>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0077O14, complete sequence
          Length = 124915

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ccaggcttttctatccagca 231
             ||||||||||||||||||||
Sbjct: 57995 ccaggcttttctatccagca 58014
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>gb|AC151968.3| Mus musculus BAC clone RP24-247B20 from chromosome 9, complete sequence
          Length = 191668

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   gttgcagctccttcagcttc 369
             ||||||||||||||||||||
Sbjct: 51847 gttgcagctccttcagcttc 51866
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>ref|XM_425959.1| PREDICTED: Gallus gallus similar to hypothetical protein KIAA1190
            (LOC428398), mRNA
          Length = 3201

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  tgcacattgcaggagttgac 396
            ||||||||||||||||||||
Sbjct: 1751 tgcacattgcaggagttgac 1732
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>gb|U41553.1| Caenorhabditis elegans cosmid ZK1193, complete sequence
          Length = 33075

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   gtatgattcttcaaatttgt 553
             ||||||||||||||||||||
Sbjct: 29378 gtatgattcttcaaatttgt 29397
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>gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosome 1, complete sequence
          Length = 197488

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ctgaccactttgctcaaaaa 167
             ||||||||||||||||||||
Sbjct: 80494 ctgaccactttgctcaaaaa 80475
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>emb|AL591585.7| Human DNA sequence from clone RP11-442E4 on chromosome 6 Contains part
             of the RNAH gene for an RNA helicase, complete sequence
          Length = 41893

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tttctgttgcagctccttca 364
             ||||||||||||||||||||
Sbjct: 14541 tttctgttgcagctccttca 14522
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>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence
          Length = 129203

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tttgcaaagtgcatcatcct 533
             ||||||||||||||||||||
Sbjct: 76951 tttgcaaagtgcatcatcct 76970
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>emb|AL110740.1|CNS018SD Botrytis cinerea strain T4 cDNA library
          Length = 770

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 536 atgattcttcaaatttgtcc 555
           ||||||||||||||||||||
Sbjct: 325 atgattcttcaaatttgtcc 306
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 212      ccaggcttttctatccagca 231
                ||||||||||||||||||||
Sbjct: 10657837 ccaggcttttctatccagca 10657818
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>gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 119388

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  aaaggaagctaaagtaaaag 95
           ||||||||||||||||||||
Sbjct: 296 aaaggaagctaaagtaaaag 277
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>gb|AC107419.3| Homo sapiens X BAC RP11-241K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151900

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   gcttctcttcaatgcacatt 384
             ||||||||||||||||||||
Sbjct: 18043 gcttctcttcaatgcacatt 18024
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>ref|XM_340807.2| PREDICTED: Rattus norvegicus obscurin, cytoskeletal calmodulin and
            titin-interacting RhoGEF (Obscn), mRNA
          Length = 23634

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 346  ttctgttgcagctccttcagcttc 369
            ||||||||||||| ||||||||||
Sbjct: 6689 ttctgttgcagcttcttcagcttc 6712
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>dbj|AB062506.2| Methylobacillus sp. 12S exopolysaccharide biosynthesis gene cluster,
             complete cds
          Length = 28120

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   cattccagcatttgtctcca 513
             ||||||||||||||||||||
Sbjct: 18732 cattccagcatttgtctcca 18713
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>gb|AC007618.21| Homo sapiens 12 BAC RP11-885B4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 42876

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aaaggaagctaaagtaaaag 95
             ||||||||||||||||||||
Sbjct: 41172 aaaggaagctaaagtaaaag 41153
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>emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chromosome 4, complete
             sequence
          Length = 233270

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   tgcatcatcctgtatgattc 542
             ||||||||||||||||||||
Sbjct: 66250 tgcatcatcctgtatgattc 66231
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>gb|AC005785.1|AC005785 Homo sapiens chromosome 19, cosmid R33907, complete sequence
          Length = 41630

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 346   ttctgttgcagctccttcagcttc 369
             |||||||||||||||||| |||||
Sbjct: 21281 ttctgttgcagctccttccgcttc 21258
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>gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosome 1, complete sequence
          Length = 202877

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ctgaccactttgctcaaaaa 167
             ||||||||||||||||||||
Sbjct: 23487 ctgaccactttgctcaaaaa 23468
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 212      ccaggcttttctatccagca 231
                ||||||||||||||||||||
Sbjct: 10729381 ccaggcttttctatccagca 10729362
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>emb|AL929273.8| Mouse DNA sequence from clone RP23-348N10 on chromosome X, complete
             sequence
          Length = 104535

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 576   actgtgtccttcaacctgtg 595
             ||||||||||||||||||||
Sbjct: 61113 actgtgtccttcaacctgtg 61132


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,704,557
Number of Sequences: 3902068
Number of extensions: 5704557
Number of successful extensions: 111388
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111219
Number of HSP's gapped (non-prelim): 164
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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