ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17m08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF216852.1|AF216852 Zea mays delta-COP mRNA, complete cds Length = 1947 Score = 442 bits (223), Expect = e-121 Identities = 409/471 (86%) Strand = Plus / Minus Query: 238 actttggagggttgccttccttcagaggatgaattccagtgaccttcagatcactgaaag 297 |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 1675 acttgggagggttgccttccttcagaggaagaattccagtaaccttcagatcactgaaag 1616 Query: 298 tattggaagcaccaaatccaatagagatggggaaaaatgttgacggatcagccgggggaa 357 || | || ||| |||||||| |||||||||||||| | ||| || ||||| ||||||| Sbjct: 1615 tactcgatgcagaaaatccaacggagatggggaaaaacgatgatgggtcagctgggggaa 1556 Query: 358 caataaattccatcgatccactgcggtttgactgatcaataaggataatggaccattcca 417 ||| ||||||||| || |||||||| || |||||||| ||||||| ||| |||||||||| Sbjct: 1555 caacaaattccatggaaccactgcgattcgactgatcgataaggagaatagaccattcca 1496 Query: 418 atacagagtttctagagtcatacttccactctccatcaatctgtttaacggttggagcct 477 | ||||||||||| ||||| |||||||||||||||| |||||| |||| | ||||||| Sbjct: 1495 acacagagtttcttgagtcgaacttccactctccatcgatctgtctaacactcggagcct 1436 Query: 478 cccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacatctctgagg 537 |||||||||| |||||||| || ||||||||||| |||| ||| ||||||||||| || | Sbjct: 1435 cccgaagtgctggcagaggtatagatatgacaacgttgtgcagatcaaacatctcagaag 1376 Query: 538 cctcgtattcaatgttgacataggtttcatttccagataccgatggccagcagttaactg 597 | || ||||||||||| ||||||||||||||||||||||| || |||||||| || |||| Sbjct: 1375 cttcatattcaatgttcacataggtttcatttccagatactgacggccagcaattgactg 1316 Query: 598 acaggggtaaattcgattcattcatcccctgaattctccatttcacaagtggtgtttcat 657 |||| |||||| || |||| ||||||||| |||||||||||||| || || ||||||| Sbjct: 1315 acagaggtaaagatgactcatccatcccctggattctccatttcaccagaggagtttcat 1256 Query: 658 tttgaccacttgggaaaggcctgtttggatcttttgctccaacaatttgct 708 |||||||||| || || ||||||||||||||||||||||| | |||||||| Sbjct: 1255 tttgaccactcggaaagggcctgtttggatcttttgctcccaaaatttgct 1205
>dbj|AK104894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G01, full insert sequence Length = 1277 Score = 442 bits (223), Expect = e-121 Identities = 415/479 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1040 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 981 Query: 276 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 335 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 980 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 921 Query: 336 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 395 ||||| |||||||| ||||| ||| ||||||||| || ||||||||||||||||||||| Sbjct: 920 gttgatggatcagctggggggacagcaaattccatggagccactgcggtttgactgatca 861 Query: 396 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 455 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 860 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 801 Query: 456 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 515 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 800 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 741 Query: 516 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 575 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 740 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 681 Query: 576 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 635 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 680 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 621 Query: 636 catttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgc 694 || || || || || ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 620 cacttaaccagaggagtttcattttgaccacttgggaatggcctgtttggatcttttgc 562
>dbj|AK100520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J17, full insert sequence Length = 1972 Score = 442 bits (223), Expect = e-121 Identities = 415/479 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1735 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 1676 Query: 276 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 335 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 1675 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 1616 Query: 336 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 395 ||||| |||||||| ||||| |||| ||||||||| || |||||||||||||||||||| Sbjct: 1615 gttgatggatcagctggggggacaacaaattccatggagccactgcggtttgactgatcg 1556 Query: 396 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 455 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 1555 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 1496 Query: 456 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 515 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1495 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 1436 Query: 516 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 575 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1435 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 1376 Query: 576 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 635 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 1375 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 1316 Query: 636 catttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgc 694 || || || || || ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1315 cacttaaccagaggagtttcattttgaccacttgggaatggcctgtttggatcttttgc 1257
>dbj|AK100201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040F10, full insert sequence Length = 1972 Score = 442 bits (223), Expect = e-121 Identities = 415/479 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1735 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 1676 Query: 276 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 335 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 1675 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 1616 Query: 336 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 395 ||||| |||||||| ||||| |||| ||||||||| || |||||||||||||||||||| Sbjct: 1615 gttgatggatcagctggggggacaacaaattccatggagccactgcggtttgactgatcg 1556 Query: 396 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 455 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 1555 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 1496 Query: 456 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 515 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1495 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 1436 Query: 516 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 575 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1435 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 1376 Query: 576 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 635 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 1375 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 1316 Query: 636 catttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgc 694 || || || || || ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1315 cacttaaccagaggagtttcattttgaccacttgggaatggcctgtttggatcttttgc 1257
>dbj|AK099633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059C16, full insert sequence Length = 1962 Score = 442 bits (223), Expect = e-121 Identities = 415/479 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1725 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 1666 Query: 276 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 335 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 1665 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 1606 Query: 336 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 395 ||||| |||||||| ||||| |||| ||||||||| || |||||||||||||||||||| Sbjct: 1605 gttgatggatcagctggggggacaacaaattccatggagccactgcggtttgactgatcg 1546 Query: 396 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 455 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 1545 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 1486 Query: 456 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 515 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1485 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 1426 Query: 516 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 575 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1425 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 1366 Query: 576 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 635 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 1365 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 1306 Query: 636 catttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgc 694 || || || || || ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1305 cacttaaccagaggagtttcattttgaccacttgggaatggcctgtttggatcttttgc 1247
>dbj|AK068582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157O09, full insert sequence Length = 2010 Score = 438 bits (221), Expect = e-119 Identities = 425/493 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 1763 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 1704 Query: 276 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 335 || ||||||| ||||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1703 gtaaccttcaaatcactgaatgtactcgatgcggaaaatccaatagatatggggaaaaat 1644 Query: 336 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 395 ||||| |||||||| ||||| |||| |||||||| || ||||||||||| |||||||| Sbjct: 1643 gttgatggatcagctggggggacaacgaattccatggagccactgcggttcgactgatcg 1584 Query: 396 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 455 ||||| | ||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 1583 ataagaagaatggaccattccaacacggagtttctcgagtcatacttccattctccatca 1524 Query: 456 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 515 |||||| |||| ||||||||||||| || ||||||| || || || |||||||||||| Sbjct: 1523 atctgtctaacacttggagcctcccggagagcaggcaatggtatagagatgacaacattg 1464 Query: 516 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 575 | ||||||||||||||| | || || || ||||||||||||||||||||| |||||||| Sbjct: 1463 tgcaggtcaaacatctcagcagcttcatactcaatgttgacataggtttcacttccagat 1404 Query: 576 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 635 || |||||||||||||| ||||| || ||||| || |||| |||||||||||||||| Sbjct: 1403 actgatggccagcagttgactgatagaggtaacgatgactcatccatcccctgaattctc 1344 Query: 636 catttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgct 695 ||||| || || || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1343 catttaaccagaggagtttcattttgaccacttgggaatggcctgtttggatcttttgct 1284 Query: 696 ccaacaatttgct 708 || |||| ||||| Sbjct: 1283 cccacaacttgct 1271
>dbj|AK106813.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C12, full insert sequence Length = 2584 Score = 387 bits (195), Expect = e-104 Identities = 425/501 (84%), Gaps = 3/501 (0%) Strand = Plus / Minus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttgc---cttccttcagaggat 267 ||||||||||||| |||||||| ||||||||||||||||||| |||| |||| ||| Sbjct: 2252 cagcaaccaaacgaaccctctgcgaatactttggagggttgctaccttcattcaaagggc 2193 Query: 268 gaattccagtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatgg 327 | |||||||| ||||||| || |||||||||||| || || |||||||| || |||| Sbjct: 2192 ggattccagtaaccttcacattactgaaagtattcgatgcggaaaatccaacggatatgg 2133 Query: 328 ggaaaaatgttgacggatcagccgggggaacaataaattccatcgatccactgcggtttg 387 || |||| |||| |||||||| || ||||||| ||||||||| |||||||||||||||| Sbjct: 2132 ggtaaaacattgatggatcagctggaggaacaacaaattccatggatccactgcggtttg 2073 Query: 388 actgatcaataaggataatggaccattccaatacagagtttctagagtcatacttccact 447 | ||||||||||||||||| ||||||||||| || |||||||| || ||||||||||||| Sbjct: 2072 attgatcaataaggataatagaccattccaaaaccgagtttcttgaatcatacttccact 2013 Query: 448 ctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatga 507 |||| || |||||| |||| ||||||||||||||||||||| ||||| || ||||||| Sbjct: 2012 ctccgtctatctgtctaacacgtggagcctcccgaagtgcaggaagaggtatagatatga 1953 Query: 508 caacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcat 567 ||| ||| ||||||||||||||| || || || || || |||||||| |||||||||| Sbjct: 1952 tgacactgtgcaggtcaaacatctcagaagcttcatactcgatgttgacgtaggtttcat 1893 Query: 568 ttccagataccgatggccagcagttaactgacaggggtaaattcgattcattcatcccct 627 |||| ||| ||||||||||| || ||||| || |||||| || ||||||||||||| Sbjct: 1892 ttcctaatattgatggccagcaattgactgatagaggtaaagatgactcattcatcccct 1833 Query: 628 gaattctccatttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggat 687 | |||||||||||||| || || |||||||||||||||||||||||||||||| | |||| Sbjct: 1832 gtattctccatttcactagaggagtttcattttgaccacttgggaaaggcctgataggat 1773 Query: 688 cttttgctccaacaatttgct 708 ||||||| || | |||||||| Sbjct: 1772 cttttgcccccagaatttgct 1752
>gb|AY109599.1| Zea mays CL1247_1 mRNA sequence Length = 2174 Score = 355 bits (179), Expect = 1e-94 Identities = 394/471 (83%) Strand = Plus / Minus Query: 238 actttggagggttgccttccttcagaggatgaattccagtgaccttcagatcactgaaag 297 |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 1764 acttgggagggttgccttccttcagaggaagaattccagtaaccttcagatcactgaaag 1705 Query: 298 tattggaagcaccaaatccaatagagatggggaaaaatgttgacggatcagccgggggaa 357 || | || ||| |||||||| ||||||||| | ||| || ||||| || Sbjct: 1704 tactcgatgcagaaaatccaacggagatggggnnnnncgatgatgggtcagctnnnnnaa 1645 Query: 358 caataaattccatcgatccactgcggtttgactgatcaataaggataatggaccattcca 417 ||| ||||||||| || |||||||| || |||||||| ||||||| ||| |||||||||| Sbjct: 1644 caacaaattccatggaaccactgcgattcgactgatcgataaggagaatagaccattcca 1585 Query: 418 atacagagtttctagagtcatacttccactctccatcaatctgtttaacggttggagcct 477 | ||||||||||| ||||| |||||||||||||||| |||||| |||| | ||||||| Sbjct: 1584 acacagagtttcttgagtcgaacttccactctccatcgatctgtctaacactcggagcct 1525 Query: 478 cccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacatctctgagg 537 |||||||||| |||||||| || ||||||||||| |||| ||| ||||||||||| || | Sbjct: 1524 cccgaagtgctggcagaggtatagatatgacaacgttgtgcagatcaaacatctcagaag 1465 Query: 538 cctcgtattcaatgttgacataggtttcatttccagataccgatggccagcagttaactg 597 | || ||||||||||| ||||||||||||||||||||||| || |||||||| || ||| Sbjct: 1464 cttcatattcaatgttcacataggtttcatttccagatacagacggccagcaattgactn 1405 Query: 598 acaggggtaaattcgattcattcatcccctgaattctccatttcacaagtggtgtttcat 657 |||||| || |||| ||||||||| |||||||||||||| || || ||||||| Sbjct: 1404 nnnnnggtaaagatgactcatccatcccctggattctccatttcaccagaggagtttcat 1345 Query: 658 tttgaccacttgggaaaggcctgtttggatcttttgctccaacaatttgct 708 |||||||||| || || ||||||||||||||||||||||| | |||||||| Sbjct: 1344 tttgaccactcggaaagggcctgtttggatcttttgctcccaaaatttgct 1294
>ref|NM_190465.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 246 bits (124), Expect = 8e-62 Identities = 352/428 (82%) Strand = Plus / Minus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| |||||| || ||||| || ||| ||| |||| ||| || ||||| |||||| Sbjct: 1469 accttcaaatcactaaatgtatttgatgcagaaaacccaacagatatcgggaagaatgtt 1410 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatcaata 398 || |||||||| | || ||| | || |||| || |||||||||||||| ||||||| | Sbjct: 1409 gatggatcagctgcagggacagtgaactccaaagaaccactgcggtttgattgatcaaca 1350 Query: 399 aggataatggaccattccaatacagagtttctagagtcatacttccactctccatcaatc 458 || ||||||||||| ||||| || || ||||| ||||||||| |||| ||||| || ||| Sbjct: 1349 agaataatggaccactccaacactgaatttcttgagtcatacctccattctccgtctatc 1290 Query: 459 tgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttc 518 || |||| ||||||||||| |||||| || ||||| || || ||||||||||||| | Sbjct: 1289 tgcctaacacctggagcctccctaagtgcggggagagggatagagatgacaacattgtgc 1230 Query: 519 aggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagatacc 578 | |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1229 aaatcaaacatctctgaagcttcatattcaatgttcacataggtttcatttccggacacc 1170 Query: 579 gatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctccat 638 || ||||| ||||| |||| || || | | || ||||||| | |||| ||||||||| Sbjct: 1169 gaaggccaacagttcactgccaatggaagagatgactcattcaactcctggattctccat 1110 Query: 639 ttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgctcca 698 ||||| | |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1109 ttcaccaacggtgtttcattttgaccactggggaaaggcctgtttggatcttttgccccc 1050 Query: 699 acaatttg 706 |||||||| Sbjct: 1049 acaatttg 1042
>emb|Z67962.1|OSARDCOP O.sativa mRNA for archain/delta-COP Length = 1960 Score = 246 bits (124), Expect = 8e-62 Identities = 352/428 (82%) Strand = Plus / Minus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| |||||| || ||||| || ||| ||| |||| ||| || ||||| |||||| Sbjct: 1619 accttcaaatcactaaatgtatttgatgcagaaaacccaacagatatcgggaagaatgtt 1560 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatcaata 398 || |||||||| | || ||| | || |||| || |||||||||||||| ||||||| | Sbjct: 1559 gatggatcagctgcagggacagtgaactccaaagaaccactgcggtttgattgatcaaca 1500 Query: 399 aggataatggaccattccaatacagagtttctagagtcatacttccactctccatcaatc 458 || ||||||||||| ||||| || || ||||| ||||||||| |||| ||||| || ||| Sbjct: 1499 agaataatggaccactccaacactgaatttcttgagtcatacctccattctccgtctatc 1440 Query: 459 tgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttc 518 || |||| ||||||||||| |||||| || ||||| || || ||||||||||||| | Sbjct: 1439 tgcctaacacctggagcctccctaagtgcggggagagggatagagatgacaacattgtgc 1380 Query: 519 aggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagatacc 578 | |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1379 aaatcaaacatctctgaagcttcatattcaatgttcacataggtttcatttccggacacc 1320 Query: 579 gatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctccat 638 || ||||| ||||| |||| || || | | || ||||||| | |||| ||||||||| Sbjct: 1319 gaaggccaacagttcactgccaatggaagagatgactcattcaactcctggattctccat 1260 Query: 639 ttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgctcca 698 ||||| | |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1259 ttcaccaacggtgtttcattttgaccactggggaaaggcctgtttggatcttttgccccc 1200 Query: 699 acaatttg 706 |||||||| Sbjct: 1199 acaatttg 1192
>dbj|AK069745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K10, full insert sequence Length = 2042 Score = 246 bits (124), Expect = 8e-62 Identities = 352/428 (82%) Strand = Plus / Minus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| |||||| || ||||| || ||| ||| |||| ||| || ||||| |||||| Sbjct: 1701 accttcaaatcactaaatgtatttgatgcagaaaacccaacagatatcgggaagaatgtt 1642 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatcaata 398 || |||||||| | || ||| | || |||| || |||||||||||||| ||||||| | Sbjct: 1641 gatggatcagctgcagggacagtgaactccaaagaaccactgcggtttgattgatcaaca 1582 Query: 399 aggataatggaccattccaatacagagtttctagagtcatacttccactctccatcaatc 458 || ||||||||||| ||||| || || ||||| ||||||||| |||| ||||| || ||| Sbjct: 1581 agaataatggaccactccaacactgaatttcttgagtcatacctccattctccgtctatc 1522 Query: 459 tgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttc 518 || |||| ||||||||||| |||||| || ||||| || || ||||||||||||| | Sbjct: 1521 tgcctaacacctggagcctccctaagtgcggggagagggatagagatgacaacattgtgc 1462 Query: 519 aggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagatacc 578 | |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1461 aaatcaaacatctctgaagcttcatattcaatgttcacataggtttcatttccggacacc 1402 Query: 579 gatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctccat 638 || ||||| ||||| |||| || || | | || ||||||| | |||| ||||||||| Sbjct: 1401 gaaggccaacagttcactgccaatggaagagatgactcattcaactcctggattctccat 1342 Query: 639 ttcacaagtggtgtttcattttgaccacttgggaaaggcctgtttggatcttttgctcca 698 ||||| | |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1341 ttcaccaacggtgtttcattttgaccactggggaaaggcctgtttggatcttttgccccc 1282 Query: 699 acaatttg 706 |||||||| Sbjct: 1281 acaatttg 1274
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 192 bits (97), Expect = 1e-45 Identities = 142/157 (90%) Strand = Plus / Minus Query: 442 tccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattg 501 |||||||||||||||||||| |||| | |||||||||||||||||||||| || || | Sbjct: 142539 tccactctccatcaatctgtctaacactcggagcctcccgaagtgcaggcaatggtatag 142480 Query: 502 atatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacatagg 561 ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | Sbjct: 142479 atatgacaacattgtgcaggtcaaacatctcagcagcctcatattcaatgttgacataag 142420 Query: 562 tttcatttccagataccgatggccagcagttaactga 598 ||||||||||||||||||||||||||||||| ||||| Sbjct: 142419 tttcatttccagataccgatggccagcagttgactga 142383 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Minus Query: 438 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 497 |||||||| ||||||||||||||| |||| ||||||||||||| || ||||||| || Sbjct: 131855 tacttccattctccatcaatctgtctaacacttggagcctcccggagagcaggcaatggt 131796 Query: 498 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 557 || || ||||||||||||| ||||||||||||||| | || || || |||||||||||| Sbjct: 131795 atagagatgacaacattgtgcaggtcaaacatctcagcagcttcatactcaatgttgaca 131736 Query: 558 taggtttcatttccagataccgatggccagcagtt 592 ||||||||| |||||||||| |||||||||||||| Sbjct: 131735 taggtttcacttccagatactgatggccagcagtt 131701 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||| ||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 131568 tcatccatcccctgaattctccatttaaccagaggagtttcattttgaccacttgggaat 131509 Query: 675 ggcctgtttggatcttttgctccaacaatttgct 708 ||||||||||||||||||||||| |||| ||||| Sbjct: 131508 ggcctgtttggatcttttgctcccacaacttgct 131475 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||| |||||| ||||||||||| || || || || ||||||||||||||||||||||| Sbjct: 142265 tcatccatcccatgaattctccacttaaccagaggagtttcattttgaccacttgggaat 142206 Query: 675 ggcctgtttggatcttttgc 694 |||||||||||||||||||| Sbjct: 142205 ggcctgtttggatcttttgc 142186 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 370 ||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 143479 aaatccaattgatatggggaaaaatgttgatggatcagctggggggacaacaaattccat 143420 Query: 371 cgatccactgc 381 || ||||||| Sbjct: 143419 ggagccactgc 143409 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 370 |||||||||||| ||||||||||||||||| |||||||| ||||| |||| |||||||| Sbjct: 132443 aaatccaatagatatggggaaaaatgttgatggatcagctggggggacaacgaattccat 132384 Query: 371 cgatccactgc 381 || ||||||| Sbjct: 132383 ggagccactgc 132373 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||||||||| ||||| | ||||||||||||||| || |||||||| || ||| Sbjct: 143324 ctgcggtttgactgatcgataagaagaatggaccattccaacacggagtttctcgaatca 143265 Query: 438 tac 440 ||| Sbjct: 143264 tac 143262 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 |||||||| |||||||| ||||| | ||||||||||||||| || |||||||| |||||| Sbjct: 132284 ctgcggttcgactgatcgataagaagaatggaccattccaacacggagtttctcgagtca 132225 Query: 438 tac 440 ||| Sbjct: 132224 tac 132222 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 143670 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 143611 Query: 276 gtgacct 282 || |||| Sbjct: 143610 gtaacct 143604 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 132641 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 132582 Query: 276 gtgacct 282 || |||| Sbjct: 132581 gtaacct 132575
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 192 bits (97), Expect = 1e-45 Identities = 142/157 (90%) Strand = Plus / Minus Query: 442 tccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattg 501 |||||||||||||||||||| |||| | |||||||||||||||||||||| || || | Sbjct: 10018 tccactctccatcaatctgtctaacactcggagcctcccgaagtgcaggcaatggtatag 9959 Query: 502 atatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacatagg 561 ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | Sbjct: 9958 atatgacaacattgtgcaggtcaaacatctcagcagcctcatattcaatgttgacataag 9899 Query: 562 tttcatttccagataccgatggccagcagttaactga 598 ||||||||||||||||||||||||||||||| ||||| Sbjct: 9898 tttcatttccagataccgatggccagcagttgactga 9862 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||| |||||| ||||||||||| || || || || ||||||||||||||||||||||| Sbjct: 9744 tcatccatcccatgaattctccacttaaccagaggagtttcattttgaccacttgggaat 9685 Query: 675 ggcctgtttggatcttttgc 694 |||||||||||||||||||| Sbjct: 9684 ggcctgtttggatcttttgc 9665 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 370 ||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 10958 aaatccaattgatatggggaaaaatgttgatggatcagctggggggacaacaaattccat 10899 Query: 371 cgatccactgc 381 || ||||||| Sbjct: 10898 ggagccactgc 10888 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||||||||| ||||| | ||||||||||||||| || |||||||| || ||| Sbjct: 10803 ctgcggtttgactgatcgataagaagaatggaccattccaacacggagtttctcgaatca 10744 Query: 438 tac 440 ||| Sbjct: 10743 tac 10741 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 11149 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 11090 Query: 276 gtgacct 282 || |||| Sbjct: 11089 gtaacct 11083 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 119 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 60 Query: 276 gtgacct 282 || |||| Sbjct: 59 gtaacct 53
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 192 bits (97), Expect = 1e-45 Identities = 142/157 (90%) Strand = Plus / Minus Query: 442 tccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattg 501 |||||||||||||||||||| |||| | |||||||||||||||||||||| || || | Sbjct: 14062463 tccactctccatcaatctgtctaacactcggagcctcccgaagtgcaggcaatggtatag 14062404 Query: 502 atatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacatagg 561 ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | Sbjct: 14062403 atatgacaacattgtgcaggtcaaacatctcagcagcctcatattcaatgttgacataag 14062344 Query: 562 tttcatttccagataccgatggccagcagttaactga 598 ||||||||||||||||||||||||||||||| ||||| Sbjct: 14062343 tttcatttccagataccgatggccagcagttgactga 14062307 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Minus Query: 438 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 497 |||||||| ||||||||||||||| |||| ||||||||||||| || ||||||| || Sbjct: 14051778 tacttccattctccatcaatctgtctaacacttggagcctcccggagagcaggcaatggt 14051719 Query: 498 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 557 || || ||||||||||||| ||||||||||||||| | || || || |||||||||||| Sbjct: 14051718 atagagatgacaacattgtgcaggtcaaacatctcagcagcttcatactcaatgttgaca 14051659 Query: 558 taggtttcatttccagataccgatggccagcagtt 592 ||||||||| |||||||||| |||||||||||||| Sbjct: 14051658 taggtttcacttccagatactgatggccagcagtt 14051624 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||| ||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 14051491 tcatccatcccctgaattctccatttaaccagaggagtttcattttgaccacttgggaat 14051432 Query: 675 ggcctgtttggatcttttgctccaacaatttgct 708 ||||||||||||||||||||||| |||| ||||| Sbjct: 14051431 ggcctgtttggatcttttgctcccacaacttgct 14051398 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||| |||||| ||||||||||| || || || || ||||||||||||||||||||||| Sbjct: 14062189 tcatccatcccatgaattctccacttaaccagaggagtttcattttgaccacttgggaat 14062130 Query: 675 ggcctgtttggatcttttgc 694 |||||||||||||||||||| Sbjct: 14062129 ggcctgtttggatcttttgc 14062110 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 370 ||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 14063403 aaatccaattgatatggggaaaaatgttgatggatcagctggggggacaacaaattccat 14063344 Query: 371 cgatccactgc 381 || ||||||| Sbjct: 14063343 ggagccactgc 14063333 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 370 |||||||||||| ||||||||||||||||| |||||||| ||||| |||| |||||||| Sbjct: 14052366 aaatccaatagatatggggaaaaatgttgatggatcagctggggggacaacgaattccat 14052307 Query: 371 cgatccactgc 381 || ||||||| Sbjct: 14052306 ggagccactgc 14052296 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||||||||| ||||| | ||||||||||||||| || |||||||| || ||| Sbjct: 14063248 ctgcggtttgactgatcgataagaagaatggaccattccaacacggagtttctcgaatca 14063189 Query: 438 tac 440 ||| Sbjct: 14063188 tac 14063186 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 |||||||| |||||||| ||||| | ||||||||||||||| || |||||||| |||||| Sbjct: 14052207 ctgcggttcgactgatcgataagaagaatggaccattccaacacggagtttctcgagtca 14052148 Query: 438 tac 440 ||| Sbjct: 14052147 tac 14052145 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 14063594 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 14063535 Query: 276 gtgacct 282 || |||| Sbjct: 14063534 gtaacct 14063528 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 14052564 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 14052505 Query: 276 gtgacct 282 || |||| Sbjct: 14052504 gtaacct 14052498
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 17116012 tcattcatcccctgtattctccatttcactagaggagtttcattttgaccacttgggaaa 17116071 Query: 675 ggcctgtttggatcttttgctccaacaatttgct 708 |||||| | ||||||||||| || | |||||||| Sbjct: 17116072 ggcctgataggatcttttgcccccagaatttgct 17116105 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 438 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 497 |||||||||||||| || |||||| |||| ||||||||||||||||||||| ||||| Sbjct: 17115762 tacttccactctccgtctatctgtctaacacgtggagcctcccgaagtgcaggaagaggt 17115821 Query: 498 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 557 || ||||||| ||| ||| ||||||||||||||| || || || || || |||||||| Sbjct: 17115822 atagatatgatgacactgtgcaggtcaaacatctcagaagcttcatactcgatgttgacg 17115881 Query: 558 taggtttcatttccagataccgatggccagca 589 |||||||||||||| ||| ||||||||||| Sbjct: 17115882 taggtttcatttcctaatattgatggccagca 17115913 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||| Sbjct: 17115244 ctgcggtttgattgatcaataaggataatagaccattccaaaaccgagtttcttgaatca 17115303 Query: 438 tac 440 ||| Sbjct: 17115304 tac 17115306 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttgc 252 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 17114900 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 17114941 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttgc 252 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 17103250 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 17103291 Score = 61.9 bits (31), Expect = 3e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| || |||||||||||| || || |||||||| || |||||| |||| || Sbjct: 17115051 accttcacattactgaaagtattcgatgcggaaaatccaacggatatggggtaaaacatt 17115110 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgc 381 || |||||||| || ||||||| ||||||||| |||||||||| Sbjct: 17115111 gatggatcagctggaggaacaacaaattccatggatccactgc 17115153 Score = 58.0 bits (29), Expect = 4e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| ||||||||||||||| || | |||||||| || ||||||||||| || Sbjct: 17103401 accttcacatcactgaaagtattcgatgtggaaaatccaacggatatggggaaaaacatt 17103460 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgc 381 || |||||||| |||||||| ||||||||| |||||||||| Sbjct: 17103461 gatggatcagctgggggaac---aaattccatggatccactgc 17103500
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 39867 tcattcatcccctgtattctccatttcactagaggagtttcattttgaccacttgggaaa 39926 Query: 675 ggcctgtttggatcttttgctccaacaatttgct 708 |||||| | ||||||||||| || | |||||||| Sbjct: 39927 ggcctgataggatcttttgcccccagaatttgct 39960 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 438 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 497 |||||||||||||| || |||||| |||| ||||||||||||||||||||| ||||| Sbjct: 39617 tacttccactctccgtctatctgtctaacacgtggagcctcccgaagtgcaggaagaggt 39676 Query: 498 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 557 || ||||||| ||| ||| ||||||||||||||| || || || || || |||||||| Sbjct: 39677 atagatatgatgacactgtgcaggtcaaacatctcagaagcttcatactcgatgttgacg 39736 Query: 558 taggtttcatttccagataccgatggccagca 589 |||||||||||||| ||| ||||||||||| Sbjct: 39737 taggtttcatttcctaatattgatggccagca 39768 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||| Sbjct: 39099 ctgcggtttgattgatcaataaggataatagaccattccaaaaccgagtttcttgaatca 39158 Query: 438 tac 440 ||| Sbjct: 39159 tac 39161 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttgc 252 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 38755 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 38796 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttgc 252 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27105 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 27146 Score = 61.9 bits (31), Expect = 3e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| || |||||||||||| || || |||||||| || |||||| |||| || Sbjct: 38906 accttcacattactgaaagtattcgatgcggaaaatccaacggatatggggtaaaacatt 38965 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgc 381 || |||||||| || ||||||| ||||||||| |||||||||| Sbjct: 38966 gatggatcagctggaggaacaacaaattccatggatccactgc 39008 Score = 58.0 bits (29), Expect = 4e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| ||||||||||||||| || | |||||||| || ||||||||||| || Sbjct: 27256 accttcacatcactgaaagtattcgatgtggaaaatccaacggatatggggaaaaacatt 27315 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgc 381 || |||||||| |||||||| ||||||||| |||||||||| Sbjct: 27316 gatggatcagctgggggaac---aaattccatggatccactgc 27355
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 ||||||| | |||| |||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 35696323 tcattcaactcctggattctccatttcaccaacggtgtttcattttgaccactggggaaa 35696382 Query: 675 ggcctgtttggatcttttgctccaacaatttg 706 |||||||||||||||||||| || |||||||| Sbjct: 35696383 ggcctgtttggatcttttgcccccacaatttg 35696414 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 470 tggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacat 529 ||||||||||| |||||| || ||||| || || ||||||||||||| || |||||||| Sbjct: 35696108 tggagcctccctaagtgcggggagagggatagagatgacaacattgtgcaaatcaaacat 35696167 Query: 530 ctctgaggcctcgtattcaatgttgacataggtttcatttccagataccgatggccagca 589 |||||| || || ||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 35696168 ctctgaagcttcatattcaatgttcacataggtttcatttccggacaccgaaggccaaca 35696227 Query: 590 gttaactg 597 ||| |||| Sbjct: 35696228 gttcactg 35696235 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||| ||||||| ||| ||||||||||| ||||| || || ||||| |||||| Sbjct: 35695170 ctgcggtttgattgatcaacaagaataatggaccactccaacactgaatttcttgagtca 35695229 Query: 438 tac 440 ||| Sbjct: 35695230 tac 35695232
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 615 tcattcatcccctgaattctccatttcacaagtggtgtttcattttgaccacttgggaaa 674 ||||||| | |||| |||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 99660 tcattcaactcctggattctccatttcaccaacggtgtttcattttgaccactggggaaa 99719 Query: 675 ggcctgtttggatcttttgctccaacaatttg 706 |||||||||||||||||||| || |||||||| Sbjct: 99720 ggcctgtttggatcttttgcccccacaatttg 99751 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 470 tggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacat 529 ||||||||||| |||||| || ||||| || || ||||||||||||| || |||||||| Sbjct: 99445 tggagcctccctaagtgcggggagagggatagagatgacaacattgtgcaaatcaaacat 99504 Query: 530 ctctgaggcctcgtattcaatgttgacataggtttcatttccagataccgatggccagca 589 |||||| || || ||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 99505 ctctgaagcttcatattcaatgttcacataggtttcatttccggacaccgaaggccaaca 99564 Query: 590 gttaactg 597 ||| |||| Sbjct: 99565 gttcactg 99572 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 378 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 437 ||||||||||| ||||||| ||| ||||||||||| ||||| || || ||||| |||||| Sbjct: 98507 ctgcggtttgattgatcaacaagaataatggaccactccaacactgaatttcttgagtca 98566 Query: 438 tac 440 ||| Sbjct: 98567 tac 98569
>emb|Z27083.1|PPPHLPVB P.pratense (agrostideae) mRNA for pollen allergen PhlpVb Length = 1379 Score = 105 bits (53), Expect = 2e-19 Identities = 106/121 (87%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 148 tgtgccactaacaagaaacggcagtaacaatttc-agtatggctttagactatttgatag 206 ||||||||||||||||||| ||||||| || ||| | | |||||| | |||||||||||| Sbjct: 1256 tgtgccactaacaagaaacagcagtaagaacttccattgtggcttcaaactatttgatag 1315 Query: 207 ttcgcagcaaccaaacggaccctctgtgaatactttggagggttgccttccttcagagga 266 || ||||| ||||| || |||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 1316 ttagcagcgaccaagcgaaccctctgtgcatac-ttggtgggttgccttccttcagagga 1374 Query: 267 t 267 | Sbjct: 1375 t 1375 Score = 63.9 bits (32), Expect = 7e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 76 gtgcgacacactacatatggaacaggacaaatc-acacatttttaaacaagtttcatgca 134 |||| ||||||||||||||||||||| |||||| |||| |||||||||| || |||| Sbjct: 1168 gtgccacacactacatatggaacaggccaaatcaacacgtttttaaacagccttagtgca 1227 Query: 135 aaattatactcattgtgcca 154 |||| |||||| |||||||| Sbjct: 1228 aaataatactccttgtgcca 1247
>ref|XM_482000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 234 Score = 103 bits (52), Expect = 8e-19 Identities = 143/172 (83%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttg---ccttccttcagaggat 267 ||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 214 cagcaaccaaacgaaccctctgcgaatactttggagggttgctaccttccttcaaagggc 155 Query: 268 gaattccagtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatgg 327 | ||||||| ||||||| ||||||||||||||| || | |||||||| || |||| Sbjct: 154 ggattccaggaaccttcacatcactgaaagtattcgatgtggaaaatccaacggatatgg 95 Query: 328 ggaaaaatgttgacggatcagccgggggaacaataaattccatcgatccact 379 ||||||| |||| |||||||| |||||||| ||||||||| |||||||| Sbjct: 94 ggaaaaacattgatggatcagctgggggaac---aaattccatggatccact 46
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 211 cagcaaccaaacggaccctctgtgaatactttggagggttgc 252 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 138767 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 138808 Score = 58.0 bits (29), Expect = 4e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 279 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 338 ||||||| ||||||||||||||| || | |||||||| || ||||||||||| || Sbjct: 138918 accttcacatcactgaaagtattcgatgtggaaaatccaacggatatggggaaaaacatt 138977 Query: 339 gacggatcagccgggggaacaataaattccatcgatccactgc 381 || |||||||| |||||||| ||||||||| |||||||||| Sbjct: 138978 gatggatcagctgggggaac---aaattccatggatccactgc 139017
>gb|DQ100574.1| Oryza sativa (indica cultivar-group) clone 5S6A57 mRNA sequence Length = 342 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 216 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 275 |||||||| ||||||| ||||||||||| ||||| || ||||| | |||| |||||||| Sbjct: 85 accaaacgagccctctgcgaatactttggtgggttaccatcctttaaaggacgaattcca 26 Query: 276 gtgaccttcagatcactgaa 295 || ||||||| ||| ||||| Sbjct: 25 gtaaccttcaaatcgctgaa 6
>gb|BT013171.1| Lycopersicon esculentum clone 134238R, mRNA sequence Length = 1995 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 372 gatccactgcggtttgactgatcaataaggataatggaccattccaatacagagtttcta 431 |||||||||||||| || | ||||| || | || ||||| ||||| ||||| ||||| Sbjct: 1565 gatccactgcggttcgaattgtcaatgagaagaacagaccactccaaaacagaatttctg 1506 Query: 432 gagtcatacttccactctccatcaatctgtttaacggttggagcctccc 480 || || ||| ||||||||||||||||||||| || |||||||||||| Sbjct: 1505 gaatcgtacctccactctccatcaatctgttgtacatttggagcctccc 1457 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 555 acataggtttcatttccagataccgatggccagcagttaa 594 |||||||||||| ||||||| || || ||||||||||||| Sbjct: 1382 acataggtttcacttccagaaactgaaggccagcagttaa 1343
>emb|AL033518.14|HS322I12 Human DNA sequence from clone RP3-322I12 on chromosome 6p22.3-24.1 Contains the 3' end of the gene for a novel protein (contains KIAA1880 and FLJ32945) and two novel genes, complete sequence Length = 112961 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 411 cattccaatacagagtttctagagtcata 439 ||||||||||||||||||||| ||||||| Sbjct: 82944 cattccaatacagagtttctatagtcata 82972
>gb|AC151765.1| Ornithorhynchus anatinus chromosome UNK clone OABb-423A1, complete sequence Length = 154417 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 ccttcagatcactgaaagtat 300 ||||||||||||||||||||| Sbjct: 41220 ccttcagatcactgaaagtat 41240
>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence Length = 182901 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 aaaatgttgacggatcagccg 351 ||||||||||||||||||||| Sbjct: 637 aaaatgttgacggatcagccg 617
>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence Length = 191907 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 aaaatgttgacggatcagccg 351 ||||||||||||||||||||| Sbjct: 12314 aaaatgttgacggatcagccg 12334
>emb|CR847789.7| Zebrafish DNA sequence from clone DKEYP-87A5 in linkage group 12, complete sequence Length = 189208 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 acacatttttaaacaagtttc 129 ||||||||||||||||||||| Sbjct: 110162 acacatttttaaacaagtttc 110142
>emb|AL139085.13| Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the 5' end of the gene for chondromodulin I precursor (CHM-I), a novel gene, the PCDH8 gene for protocadherin 8 and 4 CpG islands, complete sequence Length = 173292 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gggttgccttccttcagagga 266 ||||||||||||||||||||| Sbjct: 152357 gggttgccttccttcagagga 152377
>gb|AC104147.4| Drosophila melanogaster X BAC RP98-33I18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170490 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 ccgatggccagcagttaactg 597 ||||||||||||||||||||| Sbjct: 52186 ccgatggccagcagttaactg 52206
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 agtttcatgcaaaattatact 144 ||||||||||||||||||||| Sbjct: 657034 agtttcatgcaaaattatact 657014
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 agtttcatgcaaaattatact 144 ||||||||||||||||||||| Sbjct: 619004 agtttcatgcaaaattatact 618984
>gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75 of 83 of the complete sequence Length = 318277 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 aaaatgttgacggatcagccg 351 ||||||||||||||||||||| Sbjct: 146364 aaaatgttgacggatcagccg 146344
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete sequence Length = 300933 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 ccgatggccagcagttaactg 597 ||||||||||||||||||||| Sbjct: 94476 ccgatggccagcagttaactg 94496
>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete sequence Length = 212874 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 atttttaaacaagtttcatgcaaaa 137 ||||||||||| ||||||||||||| Sbjct: 164111 atttttaaacatgtttcatgcaaaa 164087
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 agtttcatgcaaaattatact 144 ||||||||||||||||||||| Sbjct: 619004 agtttcatgcaaaattatact 618984
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 agtttcatgcaaaattatact 144 ||||||||||||||||||||| Sbjct: 657034 agtttcatgcaaaattatact 657014
>emb|BX571785.1|CNS09SBO Oryza sativa chromosome 12, . Partial sequence from PAC 1 of BAC OSJNBb0027O09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 14570 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 agtttcatgcaaaattatact 144 ||||||||||||||||||||| Sbjct: 10180 agtttcatgcaaaattatact 10160
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 agtttcatgcaaaattatact 144 ||||||||||||||||||||| Sbjct: 123968 agtttcatgcaaaattatact 123988
>gb|AC002503.1|AC002503 Drosophila melanogaster (P1 DS05187 (D54)) DNA sequence, complete sequence Length = 78938 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 aaaatgttgacggatcagccg 351 ||||||||||||||||||||| Sbjct: 4875 aaaatgttgacggatcagccg 4855
>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence Length = 195116 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 atttttaaacaagtttcatgcaaaa 137 ||||||||||| ||||||||||||| Sbjct: 170417 atttttaaacatgtttcatgcaaaa 170441
>emb|AL024456.1|DMC131F2 Drosophila melanogaster cosmid clone 131F2 Length = 22088 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 ccgatggccagcagttaactg 597 ||||||||||||||||||||| Sbjct: 20188 ccgatggccagcagttaactg 20208
>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence Length = 239812 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cagtgaccttcagatcactg 293 |||||||||||||||||||| Sbjct: 10840 cagtgaccttcagatcactg 10821
>gb|AC110575.18| Mus musculus chromosome 3, clone RP23-326B21, complete sequence Length = 176678 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 ttctccatttcacaagtggt 650 |||||||||||||||||||| Sbjct: 48744 ttctccatttcacaagtggt 48763
>gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence Length = 25003 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 acacatttttaaacaagttt 128 |||||||||||||||||||| Sbjct: 945 acacatttttaaacaagttt 964
>gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, complete sequence Length = 203942 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagtgaccttcagatcactg 293 |||||||||||||||||||| Sbjct: 30889 cagtgaccttcagatcactg 30908
>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence Length = 257203 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaacagggtacaggagaatc 55 |||||||||||||||||||| Sbjct: 163350 aaacagggtacaggagaatc 163331
>gb|AC183385.3| Pan troglodytes BAC clone CH251-277F20 from chromosome 7, complete sequence Length = 148939 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 acaaatcacacatttttaaa 121 |||||||||||||||||||| Sbjct: 126179 acaaatcacacatttttaaa 126160
>emb|BX571706.24| Zebrafish DNA sequence from clone DKEYP-123H11 in linkage group 11, complete sequence Length = 196333 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ccttcagatcactgaaagta 299 |||||||||||||||||||| Sbjct: 59156 ccttcagatcactgaaagta 59175
>ref|XM_391372.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11196.1) partial mRNA Length = 981 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 attggaagcaccaaatccaa 318 |||||||||||||||||||| Sbjct: 131 attggaagcaccaaatccaa 150
>emb|CR974431.11| Pig DNA sequence from clone CH242-511J12 on chromosome 17, complete sequence Length = 207434 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ggggaaaaatgttgacggat 345 |||||||||||||||||||| Sbjct: 14992 ggggaaaaatgttgacggat 14973
>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence Length = 180692 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 atgaattccagtgaccttca 285 |||||||||||||||||||| Sbjct: 171352 atgaattccagtgaccttca 171371
>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence Length = 223306 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 atgaattccagtgaccttca 285 |||||||||||||||||||| Sbjct: 48839 atgaattccagtgaccttca 48858
>gb|AC121878.1| Mus musculus BAC clone RP24-131C8 from 5, complete sequence Length = 163985 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaacagggtacaggagaatc 55 |||||||||||||||||||| Sbjct: 19821 aaacagggtacaggagaatc 19802
>gb|AC117837.4| Mus musculus BAC clone RP24-196P11 from 10, complete sequence Length = 145990 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 acaagaagaaatactacaaa 38 |||||||||||||||||||| Sbjct: 71213 acaagaagaaatactacaaa 71232
>gb|AC092648.3| Homo sapiens BAC clone RP11-421N10 from 7, complete sequence Length = 171881 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 acaaatcacacatttttaaa 121 |||||||||||||||||||| Sbjct: 104996 acaaatcacacatttttaaa 105015
>ref|XM_668111.1| Plasmodium berghei strain ANKA lipoate synthase (PB300672.00.0) partial mRNA Length = 984 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caagaagaaatactacaaac 39 |||||||||||||||||||| Sbjct: 691 caagaagaaatactacaaac 710
>ref|XM_673146.1| Plasmodium berghei strain ANKA hypothetical protein (PB000042.00.0) partial mRNA Length = 978 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caagaagaaatactacaaac 39 |||||||||||||||||||| Sbjct: 685 caagaagaaatactacaaac 704
>gb|AC117671.8| Mus musculus chromosome 10, clone RP23-389G8, complete sequence Length = 189341 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 acaagaagaaatactacaaa 38 |||||||||||||||||||| Sbjct: 35040 acaagaagaaatactacaaa 35021
>emb|AL445197.4| Human DNA sequence from clone RP11-572K18 on chromosome 1 Contains the 3' end of the DDR2 gene for discoidin domain receptor family member 2, the 5' end of the HSD17B7 gene for hydroxysteroid (17-beta) dehydrogenase 7 and a CpG island, complete sequence Length = 117040 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 tggatcttttgctccaacaa 702 |||||||||||||||||||| Sbjct: 29293 tggatcttttgctccaacaa 29274
>emb|AL117379.14|HSJ563E14 Human DNA sequence from clone RP4-563E14 on chromosome 20 Contains the 5' of the DATF1 gene encoding the death associated transcription factor 1 (DIO1, FLJ11265, KIAA0333), the 5' end of a novel geneand four CpG islands, complete sequence Length = 28519 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 agcctcccgaagtgcaggca 492 |||||||||||||||||||| Sbjct: 8340 agcctcccgaagtgcaggca 8321
>emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on chromosome 8, complete sequence Length = 221012 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagtgaccttcagatcactg 293 |||||||||||||||||||| Sbjct: 24941 cagtgaccttcagatcactg 24960
>gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence Length = 204193 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 atttttaaacaagtttcatg 132 |||||||||||||||||||| Sbjct: 155500 atttttaaacaagtttcatg 155481
>emb|AJ720536.1| Gallus gallus mRNA for hypothetical protein, clone 19n17 Length = 2541 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 tacttccactctccatcaatctgt 461 |||||||||| ||||||||||||| Sbjct: 2052 tacttccactgtccatcaatctgt 2029
>ref|NM_138885.1| Rattus norvegicus golgi autoantigen, golgin subfamily b, macrogolgin 1 (Golgb1), mRNA Length = 10170 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 gcctcccgaagtgcaggcagagga 497 |||||| ||||||||||||||||| Sbjct: 654 gcctccagaagtgcaggcagagga 677
>ref|NM_001006212.1| Gallus gallus Williams-Beuren syndrome chromosome region 16 (WBSCR16), mRNA Length = 2541 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 tacttccactctccatcaatctgt 461 |||||||||| ||||||||||||| Sbjct: 2052 tacttccactgtccatcaatctgt 2029
>emb|Y11909.1|PFEMP1C13 P.falciparum var gene, partial, chromosome 13 Length = 585 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tacatatggaacaggacaaa 106 |||||||||||||||||||| Sbjct: 150 tacatatggaacaggacaaa 169
>gb|AC154582.2| Mus musculus BAC clone RP23-381N7 from chromosome 12, complete sequence Length = 194302 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 tgttgacataggtttcattt 569 |||||||||||||||||||| Sbjct: 133353 tgttgacataggtttcattt 133372
>gb|AC025097.41| Homo sapiens 12 BAC RP11-285E4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203530 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaagaaatactacaaaca 40 |||||||||||||||||||| Sbjct: 94159 aagaagaaatactacaaaca 94178
>emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on chromosome 2, complete sequence Length = 170293 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 ttccttcagaggatgaattc 273 |||||||||||||||||||| Sbjct: 92269 ttccttcagaggatgaattc 92250
>emb|AL935207.6| Zebrafish DNA sequence from clone CH211-251J8, complete sequence Length = 146351 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 acacatttttaaacaagttt 128 |||||||||||||||||||| Sbjct: 68642 acacatttttaaacaagttt 68661
>emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 in linkage group 2, complete sequence Length = 163971 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 acacatttttaaacaagttt 128 |||||||||||||||||||| Sbjct: 160999 acacatttttaaacaagttt 160980
>gb|AC139158.3| Mus musculus BAC clone RP24-77I7 from 8, complete sequence Length = 203921 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cagtgaccttcagatcactg 293 |||||||||||||||||||| Sbjct: 117093 cagtgaccttcagatcactg 117074
>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete sequence Length = 174638 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 cagcagttaactgacagggg 604 |||||||||||||||||||| Sbjct: 156145 cagcagttaactgacagggg 156126
>dbj|D25543.1|RATGCP60 Rattus norvegicus mRNA for novel golgi-associated protein GCP360, complete cds Length = 10170 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 gcctcccgaagtgcaggcagagga 497 |||||| ||||||||||||||||| Sbjct: 654 gcctccagaagtgcaggcagagga 677
>emb|AL607032.16| Mouse DNA sequence from clone RP23-15L19 on chromosome 4, complete sequence Length = 136416 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccaatagagatggggaaaaa 334 |||||||||||||||||||| Sbjct: 14591 ccaatagagatggggaaaaa 14610 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,625,559 Number of Sequences: 3902068 Number of extensions: 7625559 Number of successful extensions: 152037 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151600 Number of HSP's gapped (non-prelim): 418 length of query: 708 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 685 effective length of database: 17,143,297,704 effective search space: 11743158927240 effective search space used: 11743158927240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
