ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 186 6e-44
2dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic D... 186 6e-44
3dbj|AK108514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
4gb|AC115803.17| Mus musculus chromosome 8, clone RP23-410F24, co... 42 2.3
5ref|XM_446842.1| Candida glabrata CBS138, CAGL0H00979g partial mRNA 42 2.3
6emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 42 2.3
7emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, c... 42 2.3
8emb|AL805949.4| Mouse DNA sequence from clone RP23-424K9 on chro... 42 2.3
9gb|AC136372.13| Mus musculus chromosome 15, clone RP23-232G24, c... 40 9.0
10gb|AC113450.20| Mus musculus chromosome 7, clone RP24-360B13, co... 40 9.0
11gb|AY821656.1| Anas platyrhynchos interleukin-2 precursor (IL-2)... 40 9.0
12gb|AC149373.2| Phakopsora pachyrhizi clone JGIAFNA-5A10, complet... 40 9.0
13gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, comp... 40 9.0
14gb|AY548902.1| Antonospora locustae hypothetical protein gene, c... 40 9.0
15gb|AC140448.3| Mus musculus BAC clone RP23-54G12 from chromosome... 40 9.0
16gb|AC127680.3| Mus musculus BAC clone RP24-159F1 from chromosome... 40 9.0
17gb|AC102217.9| Mus musculus chromosome 1, clone RP24-160A23, com... 40 9.0
18gb|AC162285.6| Mus musculus chromosome 7, clone RP23-312O8, comp... 40 9.0
19gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosom... 40 9.0
20gb|L00028.1|MUSIGKJC3 Mus musculus immunoglobulin kappa precurso... 40 9.0
21gb|AC122224.4| Mus musculus BAC clone RP23-130L16 from chromosom... 40 9.0
22emb|BX088712.23| Zebrafish DNA sequence from clone CH211-199H2 i... 40 9.0
23gb|AC129322.3| Mus musculus BAC clone RP23-220F4 from chromosome... 40 9.0
24gb|AC122290.4| Mus musculus BAC clone RP23-254P19 from chromosom... 40 9.0
25gb|AC138715.3| Mus musculus BAC clone RP23-283E23 from chromosom... 40 9.0
26gb|L00034.1|AH001950S6 Mus musculus immunglobulin kappa chain un... 40 9.0
27gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, comple... 40 9.0
28gb|AC112662.7| Mus musculus chromosome 5, clone RP23-467F2, comp... 40 9.0
29gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosom... 40 9.0
30gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Can... 40 9.0
31ref|XM_502887.1| Yarrowia lipolytica CLIB122, YALI0D16137g predi... 40 9.0
32emb|AL356318.7| Human DNA sequence from clone RP11-161E22 on chr... 40 9.0
33gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, com... 40 9.0
34emb|AL021939.1|HS352A20 Human DNA sequence from clone RP3-352A20... 40 9.0
35gb|AC157578.7| Mus musculus chromosome 3, clone RP24-179O3, comp... 40 9.0
36emb|BX649235.2| Mouse DNA sequence from clone RP24-85D2 on chrom... 40 9.0
37emb|CR381683.9| Mouse DNA sequence from clone RP24-559I10 on chr... 40 9.0
38emb|BX088531.8| Mouse DNA sequence from clone RP23-106J7 on chro... 40 9.0
39gb|AC118466.8| Mus musculus strain 129S6/SvEvTac chromosome 4 cl... 40 9.0
40dbj|AK133296.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.0
41gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, com... 40 9.0
42gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, c... 40 9.0
43emb|AL627131.11| Mouse DNA sequence from clone RP23-468M24 on ch... 40 9.0
44gb|AC145069.9| Mus musculus chromosome 3, clone RP23-82B2, compl... 40 9.0
45gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosom... 40 9.0
46gb|AC140285.4| Mus musculus BAC clone RP24-559A5 from chromosome... 40 9.0
47dbj|AK032219.1| Mus musculus adult male olfactory brain cDNA, RI... 40 9.0
48gb|AC153788.7| Mus musculus chromosome 1, clone RP24-282H12, com... 40 9.0
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
50emb|V01561.1|MMDRF4 Mouse dispersed repetitive DNA sequences of ... 40 9.0
51dbj|AB111102.1| Candida boidinii PGK gene for phosphoglycerate k... 40 9.0
52gb|AC091657.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 9.0
53dbj|AK174765.1| Ciona intestinalis cDNA, clone:ciht040p03, full ... 40 9.0
54gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cance... 40 9.0
55emb|BX005468.9| Mouse DNA sequence from clone RP23-142E21 on chr... 40 9.0
56emb|BX284674.8| Zebrafish DNA sequence from clone DKEYP-52E12 in... 40 9.0
57emb|BX119993.9| Mouse DNA sequence from clone RP23-13I18 on chro... 40 9.0
58gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, compl... 40 9.0
59gb|AY193678.1| Lactuca serriola clone RAB16 resistance protein R... 40 9.0
60gb|AY193655.1| Lactuca serriola clone RAB10 resistance protein R... 40 9.0
61gb|AY193650.1| Lactuca saligna clone LC6 resistance protein RGC2... 40 9.0
62gb|AY193568.1| Lactuca saligna clone LB2 resistance protein RGC2... 40 9.0
63gb|AY193561.1| Lactuca sativa clone TM4 resistance protein RGC2 ... 40 9.0
64gb|AY193558.1| Lactuca sativa clone TM10 resistance protein RGC2... 40 9.0
65gb|AY193543.1| Lactuca sativa clone TDL resistance protein candi... 40 9.0
66gb|AY193515.1| Lactuca saligna clone LA1 resistance protein RGC2... 40 9.0
67gb|AY193514.1| Lactuca sativa clone TC9 resistance protein RGC2 ... 40 9.0
68gb|AF072274.1|AF072274 Lactuca sativa resistance protein candida... 40 9.0
69gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, co... 40 9.0
70emb|BX294443.5| Mouse DNA sequence from clone RP23-303J9 on chro... 40 9.0
71gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
72emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.0
73gb|AC152501.1| Mus musculus BAC clone RP24-156P7 from 9, complet... 40 9.0
74emb|BX005469.9| Mouse DNA sequence from clone RP23-218K9 on chro... 40 9.0
75emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 9.0
76gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome... 40 9.0
77emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chr... 40 9.0
78gb|AY707747.1| Anas platyrhynchos interleukin-2 precursor (IL-2)... 40 9.0
79emb|X00406.1|MMBAM12 Mouse DNA Bam repeat sequence (pMD 135) 40 9.0
80gb|AY234828.1| Zea mays cultivar B73 phytochrome B2 apoprotein (... 40 9.0 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  186 bits (94), Expect = 6e-44
 Identities = 203/238 (85%), Gaps = 1/238 (0%)
 Strand = Plus / Minus

                                                                            
Query: 409      aagttcagacagctcggtattcaataaacaagctcaacttctggaccaacacatcacgtg 468
                ||||||||||||| ||||| |||||||||| ||||| |||||| ||||||||| |  |||
Sbjct: 28007346 aagttcagacagcacggtactcaataaacaggctcagcttctgaaccaacacagcctgtg 28007287

                                                                            
Query: 469      aaccatagataggcttccttccttcactgatccaattcttctccaaactcgaagcttttg 528
                ||||| | | ||| || ||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 28007286 aaccaaatacaggttttcttccttcactgatccagttcttctccaaacttgatgctttag 28007227

                                                                            
Query: 529      catttgcccgcatgtcatccaagaaggctgagactatctgataaattgaagtccggaaaa 588
                |||||||||||||||||| |   |||||||| || |||||||| || ||||| || | ||
Sbjct: 28007226 catttgcccgcatgtcatgctcaaaggctgaaaccatctgatagatcgaagttcgaataa 28007167

                                                                          
Query: 589      catcagccattgaataagcttttgtgtgcagaccacctcttttgtgtgcttgcaatgg 646
                |||| ||||| ||| ||||||| ||||| |||||||||| |||| |||||||||||||
Sbjct: 28007166 catcggccatggaaaaagctttagtgtgaagaccacctc-tttgcgtgcttgcaatgg 28007110
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>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_A08
          Length = 119304

 Score =  186 bits (94), Expect = 6e-44
 Identities = 203/238 (85%), Gaps = 1/238 (0%)
 Strand = Plus / Minus

                                                                         
Query: 409   aagttcagacagctcggtattcaataaacaagctcaacttctggaccaacacatcacgtg 468
             ||||||||||||| ||||| |||||||||| ||||| |||||| ||||||||| |  |||
Sbjct: 51008 aagttcagacagcacggtactcaataaacaggctcagcttctgaaccaacacagcctgtg 50949

                                                                         
Query: 469   aaccatagataggcttccttccttcactgatccaattcttctccaaactcgaagcttttg 528
             ||||| | | ||| || ||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 50948 aaccaaatacaggttttcttccttcactgatccagttcttctccaaacttgatgctttag 50889

                                                                         
Query: 529   catttgcccgcatgtcatccaagaaggctgagactatctgataaattgaagtccggaaaa 588
             |||||||||||||||||| |   |||||||| || |||||||| || ||||| || | ||
Sbjct: 50888 catttgcccgcatgtcatgctcaaaggctgaaaccatctgatagatcgaagttcgaataa 50829

                                                                       
Query: 589   catcagccattgaataagcttttgtgtgcagaccacctcttttgtgtgcttgcaatgg 646
             |||| ||||| ||| ||||||| ||||| |||||||||| |||| |||||||||||||
Sbjct: 50828 catcggccatggaaaaagctttagtgtgaagaccacctc-tttgcgtgcttgcaatgg 50772
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>dbj|AK108514.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-A08, full
           insert sequence
          Length = 813

 Score =  186 bits (94), Expect = 6e-44
 Identities = 203/238 (85%), Gaps = 1/238 (0%)
 Strand = Plus / Minus

                                                                       
Query: 409 aagttcagacagctcggtattcaataaacaagctcaacttctggaccaacacatcacgtg 468
           ||||||||||||| ||||| |||||||||| ||||| |||||| ||||||||| |  |||
Sbjct: 765 aagttcagacagcacggtactcaataaacaggctcagcttctgaaccaacacagcctgtg 706

                                                                       
Query: 469 aaccatagataggcttccttccttcactgatccaattcttctccaaactcgaagcttttg 528
           ||||| | | ||| || ||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 705 aaccaaatacaggttttcttccttcactgatccagttcttctccaaacttgatgctttag 646

                                                                       
Query: 529 catttgcccgcatgtcatccaagaaggctgagactatctgataaattgaagtccggaaaa 588
           |||||||||||||||||| |   |||||||| || |||||||| || ||||| || | ||
Sbjct: 645 catttgcccgcatgtcatgctcaaaggctgaaaccatctgatagatcgaagttcgaataa 586

                                                                     
Query: 589 catcagccattgaataagcttttgtgtgcagaccacctcttttgtgtgcttgcaatgg 646
           |||| ||||| ||| ||||||| ||||| |||||||||| |||| |||||||||||||
Sbjct: 585 catcggccatggaaaaagctttagtgtgaagaccacctc-tttgcgtgcttgcaatgg 529
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>gb|AC115803.17| Mus musculus chromosome 8, clone RP23-410F24, complete sequence
          Length = 169100

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   cagcaattaaaaacagtgaaa 175
             |||||||||||||||||||||
Sbjct: 92315 cagcaattaaaaacagtgaaa 92335
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>ref|XM_446842.1| Candida glabrata CBS138, CAGL0H00979g partial mRNA
          Length = 1200

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 563 tatctgataaattgaagtccg 583
           |||||||||||||||||||||
Sbjct: 619 tatctgataaattgaagtccg 599
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 563   tatctgataaattgaagtccg 583
             |||||||||||||||||||||
Sbjct: 94909 tatctgataaattgaagtccg 94929
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>emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, complete sequence
          Length = 152080

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   aaaaacagtgaaactgttttg 183
             |||||||||||||||||||||
Sbjct: 50160 aaaaacagtgaaactgttttg 50140
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>emb|AL805949.4| Mouse DNA sequence from clone RP23-424K9 on chromosome 4, complete
            sequence
          Length = 193704

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 155  cagcaattaaaaacagtgaaa 175
            |||||||||||||||||||||
Sbjct: 5023 cagcaattaaaaacagtgaaa 5003
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>gb|AC136372.13| Mus musculus chromosome 15, clone RP23-232G24, complete sequence
          Length = 201204

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 55714 cagcaattaaaaacagtgaa 55695
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>gb|AC113450.20| Mus musculus chromosome 7, clone RP24-360B13, complete sequence
          Length = 127454

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 78669 cagcaattaaaaacagtgaa 78650
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>gb|AY821656.1| Anas platyrhynchos interleukin-2 precursor (IL-2) gene, complete
           cds
          Length = 3528

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 cctcgcacaaagttcagacagctc 423
           |||| |||||||||||||||||||
Sbjct: 786 cctcacacaaagttcagacagctc 763
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>gb|AC149373.2| Phakopsora pachyrhizi clone JGIAFNA-5A10, complete sequence
          Length = 40926

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   tcaataaacaagctcaactt 448
             ||||||||||||||||||||
Sbjct: 14638 tcaataaacaagctcaactt 14657
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>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence
          Length = 173767

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 156241 cagcaattaaaaacagtgaa 156260
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>gb|AY548902.1| Antonospora locustae hypothetical protein gene, complete cds; and
           SEC18-like vesicular fusion protein gene, partial cds
          Length = 3502

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 614 gtgcagaccacctcttttgt 633
           ||||||||||||||||||||
Sbjct: 239 gtgcagaccacctcttttgt 220
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>gb|AC140448.3| Mus musculus BAC clone RP23-54G12 from chromosome 9, complete sequence
          Length = 213580

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gtgcttccagcaattaaaaa 167
              ||||||||||||||||||||
Sbjct: 133187 gtgcttccagcaattaaaaa 133168
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>gb|AC127680.3| Mus musculus BAC clone RP24-159F1 from chromosome X, complete sequence
          Length = 199848

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 139635 cagcaattaaaaacagtgaa 139654
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>gb|AC102217.9| Mus musculus chromosome 1, clone RP24-160A23, complete sequence
          Length = 214578

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 58978 cagcaattaaaaacagtgaa 58959
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>gb|AC162285.6| Mus musculus chromosome 7, clone RP23-312O8, complete sequence
          Length = 190344

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 96808 cagcaattaaaaacagtgaa 96789
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>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete
             sequence
          Length = 202929

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 99522 cagcaattaaaaacagtgaa 99541
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>gb|L00028.1|MUSIGKJC3 Mus musculus immunoglobulin kappa precursor gene, partial sequence
          Length = 1324

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  cagcaattaaaaacagtgaa 174
            ||||||||||||||||||||
Sbjct: 1000 cagcaattaaaaacagtgaa 981
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>gb|AC122224.4| Mus musculus BAC clone RP23-130L16 from chromosome 9, complete sequence
          Length = 200246

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 622   cacctcttttgtgtgcttgc 641
             ||||||||||||||||||||
Sbjct: 20877 cacctcttttgtgtgcttgc 20858
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>emb|BX088712.23| Zebrafish DNA sequence from clone CH211-199H2 in linkage group 11,
              complete sequence
          Length = 198099

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 246    aatgatttctctccagtggatcatcata 273
              ||||||||||||||||||| || |||||
Sbjct: 133488 aatgatttctctccagtgggtcttcata 133515
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>gb|AC129322.3| Mus musculus BAC clone RP23-220F4 from chromosome 19, complete sequence
          Length = 182093

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 151679 cagcaattaaaaacagtgaa 151660
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>gb|AC122290.4| Mus musculus BAC clone RP23-254P19 from chromosome 14, complete
            sequence
          Length = 163287

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  cagcaattaaaaacagtgaa 174
            ||||||||||||||||||||
Sbjct: 4250 cagcaattaaaaacagtgaa 4269
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>gb|AC138715.3| Mus musculus BAC clone RP23-283E23 from chromosome 15, complete
             sequence
          Length = 164806

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 35294 cagcaattaaaaacagtgaa 35313
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>gb|L00034.1|AH001950S6 Mus musculus immunglobulin kappa chain unproductively rearranged
           V-T2, 3' flanking sequence
          Length = 1007

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 cagcaattaaaaacagtgaa 174
           ||||||||||||||||||||
Sbjct: 999 cagcaattaaaaacagtgaa 980
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>gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, complete sequence
          Length = 209508

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 583   ggaaaacatcagccattgaa 602
             ||||||||||||||||||||
Sbjct: 38140 ggaaaacatcagccattgaa 38159
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>gb|AC112662.7| Mus musculus chromosome 5, clone RP23-467F2, complete sequence
          Length = 200679

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 96572 cagcaattaaaaacagtgaa 96553
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>gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosome 14, complete
             sequence
          Length = 203950

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 13215 cagcaattaaaaacagtgaa 13196
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>gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 170925

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 33315 cagcaattaaaaacagtgaa 33296
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>ref|XM_502887.1| Yarrowia lipolytica CLIB122, YALI0D16137g predicted mRNA
          Length = 1677

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 443  caacttctggaccaacacat 462
            ||||||||||||||||||||
Sbjct: 1098 caacttctggaccaacacat 1117
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>emb|AL356318.7| Human DNA sequence from clone RP11-161E22 on chromosome 9 Contains part
              of the TRPM3 gene for transient receptor potential cation
              channel subfamily M, member 3 (MLSN2, LTRPC3, FLJ11726) and
              a pseudogene similar to part of CDC91 cell division cycle
              91-like 1 (S. cerevisiae) (CDC91L1), complete sequence
          Length = 141339

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     aaataacacctctttgagtaccat 110
              ||||| ||||||||||||||||||
Sbjct: 113374 aaataccacctctttgagtaccat 113351
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>gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, complete sequence
          Length = 151717

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 128180 cagcaattaaaaacagtgaa 128161
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>emb|AL021939.1|HS352A20 Human DNA sequence from clone RP3-352A20 on chromosome 6q24.1-25.1
             Contains a novel pseudogene and the 3' end of the ALDH8A1
             gene for aldehyde dehydrogenase 8 family, member A1,
             complete sequence
          Length = 144759

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   attaaaaacagtgaaactgt 179
             ||||||||||||||||||||
Sbjct: 72642 attaaaaacagtgaaactgt 72623
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>gb|AC157578.7| Mus musculus chromosome 3, clone RP24-179O3, complete sequence
          Length = 172143

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 37480 cagcaattaaaaacagtgaa 37461
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>emb|BX649235.2| Mouse DNA sequence from clone RP24-85D2 on chromosome X, complete
             sequence
          Length = 133621

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 78677 cagcaattaaaaacagtgaa 78696
to top
>emb|CR381683.9| Mouse DNA sequence from clone RP24-559I10 on chromosome X, complete
             sequence
          Length = 150276

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 94570 cagcaattaaaaacagtgaa 94589
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>emb|BX088531.8| Mouse DNA sequence from clone RP23-106J7 on chromosome X, complete
             sequence
          Length = 208905

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 62127 cagcaattaaaaacagtgaa 62146
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>gb|AC118466.8| Mus musculus strain 129S6/SvEvTac chromosome 4 clone rp22-298k22,
           complete sequence
          Length = 170592

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 cagcaattaaaaacagtgaa 174
           ||||||||||||||||||||
Sbjct: 40  cagcaattaaaaacagtgaa 21
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>dbj|AK133296.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932431D10 product:unclassifiable, full
            insert sequence
          Length = 4753

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  cagcaattaaaaacagtgaa 174
            ||||||||||||||||||||
Sbjct: 1850 cagcaattaaaaacagtgaa 1869
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>gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, complete sequence
          Length = 179744

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    cctttttgtcctcccaaaga 233
              ||||||||||||||||||||
Sbjct: 137966 cctttttgtcctcccaaaga 137947
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>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence
          Length = 184875

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   cctttttgtcctcccaaaga 233
             ||||||||||||||||||||
Sbjct: 39126 cctttttgtcctcccaaaga 39107
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>emb|AL627131.11| Mouse DNA sequence from clone RP23-468M24 on chromosome 4, complete
             sequence
          Length = 187529

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 41685 cagcaattaaaaacagtgaa 41666
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>gb|AC145069.9| Mus musculus chromosome 3, clone RP23-82B2, complete sequence
          Length = 134162

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 129779 cagcaattaaaaacagtgaa 129760
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>gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosome 13, complete
             sequence
          Length = 181617

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 31593 cagcaattaaaaacagtgaa 31574
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>gb|AC140285.4| Mus musculus BAC clone RP24-559A5 from chromosome 12, complete sequence
          Length = 170917

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 80295 cagcaattaaaaacagtgaa 80276
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>dbj|AK032219.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430503K21 product:hypothetical
            protein, full insert sequence
          Length = 3274

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  cagcaattaaaaacagtgaa 174
            ||||||||||||||||||||
Sbjct: 1590 cagcaattaaaaacagtgaa 1609
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>gb|AC153788.7| Mus musculus chromosome 1, clone RP24-282H12, complete sequence
          Length = 151799

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     ccatcatggcaacatacagaacca 68
              |||||||||| |||||||||||||
Sbjct: 117443 ccatcatggccacatacagaacca 117420
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 326     cgaacttcacttaaacaagcattc 349
               ||||||||| ||||||||||||||
Sbjct: 9964493 cgaacttcatttaaacaagcattc 9964516
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>emb|V01561.1|MMDRF4 Mouse dispersed repetitive DNA sequences of the R-family and simple
            sequence DNA; member of the B1 family of mouse dispersed
            repetitive DNA sequences
          Length = 3446

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  cagcaattaaaaacagtgaa 174
            ||||||||||||||||||||
Sbjct: 3122 cagcaattaaaaacagtgaa 3103
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>dbj|AB111102.1| Candida boidinii PGK gene for phosphoglycerate kinase, complete cds
          Length = 3064

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 442  tcaacttctggaccaacaca 461
            ||||||||||||||||||||
Sbjct: 1327 tcaacttctggaccaacaca 1308
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>gb|AC091657.3| Rattus norvegicus strain Brown Norway clone RP31-29N16, complete
             sequence
          Length = 141898

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    atggcaacatacagaaccac 69
             ||||||||||||||||||||
Sbjct: 62919 atggcaacatacagaaccac 62900
to top
>dbj|AK174765.1| Ciona intestinalis cDNA, clone:ciht040p03, full insert sequence
          Length = 604

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 507 ttctccaaactcgaagcttt 526
           ||||||||||||||||||||
Sbjct: 101 ttctccaaactcgaagcttt 82
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>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197401

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 150101 cagcaattaaaaacagtgaa 150082
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>emb|BX005468.9| Mouse DNA sequence from clone RP23-142E21 on chromosome X, complete
             sequence
          Length = 217179

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 82955 cagcaattaaaaacagtgaa 82974
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>emb|BX284674.8| Zebrafish DNA sequence from clone DKEYP-52E12 in linkage group 20,
              complete sequence
          Length = 170998

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    caaaattgagcgcttaattt 131
              ||||||||||||||||||||
Sbjct: 112832 caaaattgagcgcttaattt 112851
to top
>emb|BX119993.9| Mouse DNA sequence from clone RP23-13I18 on chromosome X, complete
              sequence
          Length = 234697

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 139536 cagcaattaaaaacagtgaa 139517
to top
>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence
          Length = 182420

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 177440 cagcaattaaaaacagtgaa 177421
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>gb|AY193678.1| Lactuca serriola clone RAB16 resistance protein RGC2-like gene,
           partial sequence
          Length = 1516

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
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>gb|AY193655.1| Lactuca serriola clone RAB10 resistance protein RGC2-like gene,
           partial sequence
          Length = 1578

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
to top
>gb|AY193650.1| Lactuca saligna clone LC6 resistance protein RGC2-like gene,
           partial sequence
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
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>gb|AY193568.1| Lactuca saligna clone LB2 resistance protein RGC2 (RGC2) gene,
           partial cds
          Length = 1558

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
to top
>gb|AY193561.1| Lactuca sativa clone TM4 resistance protein RGC2 (RGC2) gene,
           partial cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
to top
>gb|AY193558.1| Lactuca sativa clone TM10 resistance protein RGC2 (RGC2) gene,
           partial cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
to top
>gb|AY193543.1| Lactuca sativa clone TDL resistance protein candidate RGC2 (RGC2)
            pseudogene, complete sequence
          Length = 8225

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 515  actcgaagcttttgcatttg 534
            ||||||||||||||||||||
Sbjct: 6150 actcgaagcttttgcatttg 6131
to top
>gb|AY193515.1| Lactuca saligna clone LA1 resistance protein RGC2 (RGC2) gene,
           partial cds
          Length = 1574

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
to top
>gb|AY193514.1| Lactuca sativa clone TC9 resistance protein RGC2 (RGC2) gene,
           partial cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 actcgaagcttttgcatttg 534
           ||||||||||||||||||||
Sbjct: 56  actcgaagcttttgcatttg 37
to top
>gb|AF072274.1|AF072274 Lactuca sativa resistance protein candidate RGC20 (RGC2O) gene,
            partial cds
          Length = 8500

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 515  actcgaagcttttgcatttg 534
            ||||||||||||||||||||
Sbjct: 6507 actcgaagcttttgcatttg 6488
to top
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 18681 cagcaattaaaaacagtgaa 18662
to top
>emb|BX294443.5| Mouse DNA sequence from clone RP23-303J9 on chromosome X, complete
              sequence
          Length = 136741

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 134287 cagcaattaaaaacagtgaa 134268
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 326     cgaacttcacttaaacaagcattc 349
               ||||||||| ||||||||||||||
Sbjct: 9964378 cgaacttcatttaaacaagcattc 9964401
to top
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132906

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   cgaacttcacttaaacaagcattc 349
             ||||||||| ||||||||||||||
Sbjct: 93581 cgaacttcatttaaacaagcattc 93558
to top
>gb|AC152501.1| Mus musculus BAC clone RP24-156P7 from 9, complete sequence
          Length = 173480

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 622    cacctcttttgtgtgcttgc 641
              ||||||||||||||||||||
Sbjct: 106797 cacctcttttgtgtgcttgc 106778
to top
>emb|BX005469.9| Mouse DNA sequence from clone RP23-218K9 on chromosome X, complete
             sequence
          Length = 121341

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagcaattaaaaacagtgaa 174
             ||||||||||||||||||||
Sbjct: 90334 cagcaattaaaaacagtgaa 90315
to top
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 443     caacttctggaccaacacat 462
               ||||||||||||||||||||
Sbjct: 1997945 caacttctggaccaacacat 1997964
to top
>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence
          Length = 198038

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    cagcaattaaaaacagtgaa 174
              ||||||||||||||||||||
Sbjct: 165992 cagcaattaaaaacagtgaa 166011
to top
>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete
            sequence
          Length = 183985

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  cagcaattaaaaacagtgaa 174
            ||||||||||||||||||||
Sbjct: 5569 cagcaattaaaaacagtgaa 5550
to top
>gb|AY707747.1| Anas platyrhynchos interleukin-2 precursor (IL-2) gene, complete
           cds
          Length = 2973

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 cctcgcacaaagttcagacagctc 423
           |||| |||||||||||||||||||
Sbjct: 445 cctcacacaaagttcagacagctc 422
to top
>emb|X00406.1|MMBAM12 Mouse DNA Bam repeat sequence (pMD 135)
          Length = 566

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 cagcaattaaaaacagtgaa 174
           ||||||||||||||||||||
Sbjct: 254 cagcaattaaaaacagtgaa 273
to top
>gb|AY234828.1| Zea mays cultivar B73 phytochrome B2 apoprotein (phyB2) gene,
            complete cds
          Length = 10056

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 613  tgtgcagaccacctcttttgtgtgcttgcaat 644
            |||||||||||| | |||||||||||||||||
Sbjct: 9781 tgtgcagaccactt-ttttgtgtgcttgcaat 9751


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,451,617
Number of Sequences: 3902068
Number of extensions: 7451617
Number of successful extensions: 125942
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 125649
Number of HSP's gapped (non-prelim): 291
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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