ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17l08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... 511 e-142
2dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
4gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
5gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 98 4e-17
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
8gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
9gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
10dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
11gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full... 58 4e-05
12gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
13gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete s... 50 0.009
14dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
15gb|AY103669.1| Zea mays PCO073521 mRNA sequence 46 0.14
16gb|AF033496.1|AF033496 Zea mays herbicide safener binding protei... 46 0.14
17gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, comple... 44 0.56
18gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 2.2
19gb|AC124818.7| Mus musculus chromosome 14, clone RP24-505E8, com... 42 2.2
20gb|AY372453.1| Uncultured marine proteobacterium ANT32C12 fosmid... 42 2.2
21gb|AY372452.1| Uncultured marine proteobacterium ANT8C10 fosmid ... 42 2.2
22gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosom... 42 2.2
23gb|U40947.1| Caenorhabditis elegans cosmid R03E9, complete sequence 42 2.2
24emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chr... 42 2.2
25ref|XM_480481.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.7
26gb|AC004037.1| Homo sapiens chromosome 5, BAC clone 64o24, BAC 5... 40 8.7
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.7
28emb|Z92543.1|HS271G9 Human DNA sequence from clone RP1-271G9 on ... 40 8.7
29emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 i... 40 8.7
30gb|AC129713.1| Homo sapiens chromosome 5 clone RP11-391B2, compl... 40 8.7
31gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.7
32gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete s... 40 8.7
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
35gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 ... 40 8.7
36gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M1... 40 8.7
37dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
38emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 i... 40 8.7
39gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, comple... 40 8.7
40emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chro... 40 8.7
41gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, ... 40 8.7 
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score =  511 bits (258), Expect = e-142
 Identities = 500/580 (86%), Gaps = 6/580 (1%)
 Strand = Plus / Minus

                                                                        
Query: 41   agaaattacaagcttgtcacgtaggctgctacatgataatatccttgcaaacctaaggca 100
            |||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||
Sbjct: 1300 agaaattacaagcttgtcac-taggctgttacatgataatatccttgcaaacatagggca 1242

                                                                        
Query: 101  gtccatttannnnnnn-catcaaagcagaccatccatacataaacaaagcacactgcatg 159
            || | ||||        || ||||||| |||||||||||||||| ||||||||||| |  
Sbjct: 1241 gtgcctttatttttcttcagcaaagcaaaccatccatacataaataaagcacactgaa-- 1184

                                                                        
Query: 160  caagggtacatcagggtactccttgggtggacttttaagaaaccgttcacttgtagacct 219
              |||||||   || ||||  ||||| |  ||||||| ||||||||||||||||||||||
Sbjct: 1183 --agggtactaaagagtacaacttggataaacttttatgaaaccgttcacttgtagacct 1126

                                                                        
Query: 220  cgataacacctcgtgcacccagtcttttgacaattttataatcgctgaaccctgctttgg 279
            ||||||||||||||||||||||| | ||||||||||| || ||||| ||||||||||| |
Sbjct: 1125 cgataacacctcgtgcacccagtttcttgacaattttgtagtcgctaaaccctgctttcg 1066

                                                                        
Query: 280  tgaataacacatgccagtcactttcactacgctgacggcctctcgtgaagacaagcatga 339
            |||| | | ||||||||| | ||||||| || ||||||||||||||||| ||||||||||
Sbjct: 1065 tgaagagctcatgccagttattttcacttcgttgacggcctctcgtgaacacaagcatga 1006

                                                                        
Query: 340  gtatgtccatcagagtctgcgcctcaaacatgactggtcctaacgatggttccaccacaa 399
            | |||||||||||||| ||  ||| |||||||||| | || || || ||  | |||||||
Sbjct: 1005 ggatgtccatcagagtttgttccttaaacatgacttggcccaatgagggggcgaccacaa 946

                                                                        
Query: 400  tgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttacactggg 459
            ||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| ||||
Sbjct: 945  tgtctattacaatcacctttcctccctcctcgcgtgaaggaatggcatccttacattggg 886

                                                                        
Query: 460  ttaggatcttcacacaatcatcatcgctccagtggtgcaacacaagcttgagcatcaccg 519
            |||||||||| | |||||| || |  ||| |||||||||| |||||||||||||||||||
Sbjct: 885  ttaggatcttaaaacaatcctcgtaactcaagtggtgcaaaacaagcttgagcatcaccg 826

                                                                        
Query: 520  cctgagcctttgggacggtgtggaacaggtcaccgccgacatagttgactataccgtcag 579
            ||||||||||||||||||||||||| ||||| ||| | | ||||||||||||||||||||
Sbjct: 825  cctgagcctttgggacggtgtggaagaggtcgccggcaaaatagttgactataccgtcag 766

                                                    
Query: 580  ctgaagttttgtcgatcaccttggggagatccagcacggt 619
              | ||||||||||||||||||||||||||||||||||||
Sbjct: 765  aaggagttttgtcgatcaccttggggagatccagcacggt 726
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
            insert sequence
          Length = 1362

 Score =  149 bits (75), Expect = 1e-32
 Identities = 216/263 (82%)
 Strand = Plus / Minus

                                                                        
Query: 363  tcaaacatgactggtcctaacgatggttccaccacaatgtctatgacaatcacctttcct 422
            |||||||| ||||||||||  || ||| | ||||  || |||||||  || ||||| |||
Sbjct: 1000 tcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgaccttccct 941

                                                                        
Query: 423  ccctcctcacgtgagggaatggcattcttacactgggttaggatcttcacacaatcatca 482
            |||||||| ||||| |||||||| ||  | ||||| || | ||||||||| |||||||||
Sbjct: 940  ccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgcaatcatca 881

                                                                        
Query: 483  tcgctccagtggtgcaacacaagcttgagcatcaccgcctgagcctttgggacggtgtgg 542
            ||||||||||||||||| ||||||||||||||||| || ||||||  ||| |||||||||
Sbjct: 880  tcgctccagtggtgcaatacaagcttgagcatcacggcttgagccggtggcacggtgtgg 821

                                                                        
Query: 543  aacaggtcaccgccgacatagttgactataccgtcagctgaagttttgtcgatcaccttg 602
            |||| ||||||  | |||||||| || | ||| |||   |  |  |||||||||||||||
Sbjct: 820  aacaagtcacctgcaacatagttaacgacaccatcattgggcgccttgtcgatcaccttg 761

                                   
Query: 603  gggagatccagcacggtgcactt 625
            || || |||||||| ||||||||
Sbjct: 760  ggaaggtccagcacagtgcactt 738
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
            insert sequence
          Length = 1264

 Score =  149 bits (75), Expect = 1e-32
 Identities = 216/263 (82%)
 Strand = Plus / Minus

                                                                        
Query: 363  tcaaacatgactggtcctaacgatggttccaccacaatgtctatgacaatcacctttcct 422
            |||||||| ||||||||||  || ||| | ||||  || |||||||  || ||||| |||
Sbjct: 1005 tcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgaccttccct 946

                                                                        
Query: 423  ccctcctcacgtgagggaatggcattcttacactgggttaggatcttcacacaatcatca 482
            |||||||| ||||| |||||||| ||  | ||||| || | ||||||||| |||||||||
Sbjct: 945  ccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgcaatcatca 886

                                                                        
Query: 483  tcgctccagtggtgcaacacaagcttgagcatcaccgcctgagcctttgggacggtgtgg 542
            ||||||||||||||||| ||||||||||||||||| || ||||||  ||| |||||||||
Sbjct: 885  tcgctccagtggtgcaatacaagcttgagcatcacggcttgagccggtggcacggtgtgg 826

                                                                        
Query: 543  aacaggtcaccgccgacatagttgactataccgtcagctgaagttttgtcgatcaccttg 602
            |||| ||||||  | |||||||| || | ||| |||   |  |  |||||||||||||||
Sbjct: 825  aacaagtcacctgcaacatagttaacgacaccatcattgggcgccttgtcgatcaccttg 766

                                   
Query: 603  gggagatccagcacggtgcactt 625
            || || |||||||| ||||||||
Sbjct: 765  ggaaggtccagcacagtgcactt 743
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21,
              complete sequence
          Length = 147381

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                          
Query: 363    tcaaacatgactggtcctaacgatggttccaccacaatgtctatgacaatcacctttcct 422
              |||||||| ||||||||||  || ||| | ||||  || |||||||  || ||||| |||
Sbjct: 123007 tcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgaccttccct 122948

                                                                          
Query: 423    ccctcctcacgtgagggaatggcattcttacactgggttaggatcttcacacaatcatca 482
              |||||||| ||||| |||||||| ||  | ||||| || | ||||||||| |||||||||
Sbjct: 122947 ccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgcaatcatca 122888

                                       
Query: 483    tcgctccagtggtgcaacacaagct 507
              ||||||||||||||||| |||||||
Sbjct: 122887 tcgctccagtggtgcaatacaagct 122863



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 141/174 (81%), Gaps = 2/174 (1%)
 Strand = Plus / Minus

                                                                         
Query: 335   catgagtatgtccatca-gagtctgcgcctcaaacatgactggtcctaacgatggttcca 393
             |||||| |||||||||| ||| |||||| || ||||| || || || || |||||||| |
Sbjct: 64349 catgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttcaa 64291

                                                                         
Query: 394   ccacaatgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttac 453
             |||  || ||||||||||||| ||| || |||||||  ||||| ||||| || || || |
Sbjct: 64290 ccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagcctttttgc 64231

                                                                   
Query: 454   actgggttaggatcttcacacaatcatcatcgctccagtggtgcaacacaagct 507
             |||| | |||||||||||| || ||||| |||||| |||| ||||  |||||||
Sbjct: 64230 actgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 64177



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                          
Query: 506    cttgagcatcaccgcctgagcctttgggacggtgtggaacaggtcaccgccgacatagtt 565
              |||||||||||| || ||||||  ||| ||||||||||||| ||||||  | ||||||||
Sbjct: 119697 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 119638

                                                                          
Query: 566    gactataccgtcagctgaagttttgtcgatcaccttggggagatccagcacggtgcactt 625
               || | ||| |||   |  |  ||||||||||||||||| || |||||||| ||||||||
Sbjct: 119637 aacgacaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcactt 119578



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 462    aggatcttcacacaatcatcatcgctccagtggtgcaacaca 503
              ||||| |||||||| || |||||||||||||||  |||||||
Sbjct: 128530 aggattttcacacagtcgtcatcgctccagtggctcaacaca 128571
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  tcaaacatgactggtcctaacgatggttccaccacaatgtctatgacaatcacctttcct 422
            |||||||| ||||||||||  || ||| | ||||  || |||||||  || ||||| |||
Sbjct: 8756 tcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgaccttccct 8697

                                                                        
Query: 423  ccctcctcacgtgagggaatggcattcttacactgggttaggatcttcacacaatcatca 482
            |||||||| ||||| |||||||| ||  | ||||| || | ||||||||| |||||||||
Sbjct: 8696 ccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgcaatcatca 8637

                                     
Query: 483  tcgctccagtggtgcaacacaagct 507
            ||||||||||||||||| |||||||
Sbjct: 8636 tcgctccagtggtgcaatacaagct 8612



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 506  cttgagcatcaccgcctgagcctttgggacggtgtggaacaggtcaccgccgacatagtt 565
            |||||||||||| || ||||||  ||| ||||||||||||| ||||||  | ||||||||
Sbjct: 5446 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 5387

                                                                        
Query: 566  gactataccgtcagctgaagttttgtcgatcaccttggggagatccagcacggtgcactt 625
             || | ||| |||   |  |  ||||||||||||||||| || |||||||| ||||||||
Sbjct: 5386 aacgacaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcactt 5327



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 462   aggatcttcacacaatcatcatcgctccagtggtgcaacaca 503
             ||||| |||||||| || |||||||||||||||  |||||||
Sbjct: 14279 aggattttcacacagtcgtcatcgctccagtggctcaacaca 14320
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Plus

                                                                            
Query: 363      tcaaacatgactggtcctaacgatggttccaccacaatgtctatgacaatcacctttcct 422
                |||||||| ||||||||||  || ||| | ||||  || |||||||  || ||||| |||
Sbjct: 11490781 tcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgaccttccct 11490840

                                                                            
Query: 423      ccctcctcacgtgagggaatggcattcttacactgggttaggatcttcacacaatcatca 482
                |||||||| ||||| |||||||| ||  | ||||| || | ||||||||| |||||||||
Sbjct: 11490841 ccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgcaatcatca 11490900

                                         
Query: 483      tcgctccagtggtgcaacacaagct 507
                ||||||||||||||||| |||||||
Sbjct: 11490901 tcgctccagtggtgcaatacaagct 11490925



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                           
Query: 399     atgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttacactgg 458
               ||||||||||| |||||||| ||||||||||  ||||| || ||||| ||||| ||||||
Sbjct: 7137718 atgtctatgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgg 7137777

                                               
Query: 459     gttaggatcttcacacaatcatcatcgctcca 490
               |  ||||||||||| || || |||||||||||
Sbjct: 7137778 gacaggatcttcacgcagtcgtcatcgctcca 7137809



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 141/174 (81%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                            
Query: 335      catgagtatgtccatca-gagtctgcgcctcaaacatgactggtcctaacgatggttcca 393
                |||||| |||||||||| ||| |||||| || ||||| || || || || |||||||| |
Sbjct: 11549439 catgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttcaa 11549497

                                                                            
Query: 394      ccacaatgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttac 453
                |||  || ||||||||||||| ||| || |||||||  ||||| ||||| || || || |
Sbjct: 11549498 ccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagcctttttgc 11549557

                                                                      
Query: 454      actgggttaggatcttcacacaatcatcatcgctccagtggtgcaacacaagct 507
                |||| | |||||||||||| || ||||| |||||| |||| ||||  |||||||
Sbjct: 11549558 actgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 11549611



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                                
Query: 588     ttgtcgatcaccttggggagatccagcacggtgcactttgatgtgcggg 636
               |||||||||||||| ||||| |||||||| |||||| ||||||||||||
Sbjct: 7138292 ttgtcgatcaccttcgggaggtccagcaccgtgcac-ttgatgtgcggg 7138339



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Plus

                                                                            
Query: 506      cttgagcatcaccgcctgagcctttgggacggtgtggaacaggtcaccgccgacatagtt 565
                |||||||||||| || ||||||  ||| ||||||||||||| ||||||  | ||||||||
Sbjct: 11494091 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 11494150

                                                                            
Query: 566      gactataccgtcagctgaagttttgtcgatcaccttggggagatccagcacggtgcactt 625
                 || | ||| |||   |  |  ||||||||||||||||| || |||||||| ||||||||
Sbjct: 11494151 aacgacaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcactt 11494210



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                            
Query: 438      ggaatggcattcttacactgggttaggatcttcacacaatcatcatcgctccagtggtgc 497
                ||||| || |||||||| || ||||| || ||||||||||| || || ||||||||||| 
Sbjct: 11329823 ggaatagctttcttacattgagttagtattttcacacaatcctcgtcactccagtggtga 11329882

                          
Query: 498      aacacaagct 507
                | ||||||||
Sbjct: 11329883 agcacaagct 11329892



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 461      taggatcttcacacaatcatcatcgctccagtggtgcaacacaagct 507
                |||||||||||||||||| || ||  |||||||||| | ||||||||
Sbjct: 11354137 taggatcttcacacaatcctcgtcattccagtggtgaagcacaagct 11354183



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 462      aggatcttcacacaatcatcatcgctccagtggtgcaacaca 503
                ||||| |||||||| || |||||||||||||||  |||||||
Sbjct: 11485258 aggattttcacacagtcgtcatcgctccagtggctcaacaca 11485217
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Plus

                                                                            
Query: 363      tcaaacatgactggtcctaacgatggttccaccacaatgtctatgacaatcacctttcct 422
                |||||||| ||||||||||  || ||| | ||||  || |||||||  || ||||| |||
Sbjct: 11569970 tcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgaccttccct 11570029

                                                                            
Query: 423      ccctcctcacgtgagggaatggcattcttacactgggttaggatcttcacacaatcatca 482
                |||||||| ||||| |||||||| ||  | ||||| || | ||||||||| |||||||||
Sbjct: 11570030 ccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgcaatcatca 11570089

                                         
Query: 483      tcgctccagtggtgcaacacaagct 507
                ||||||||||||||||| |||||||
Sbjct: 11570090 tcgctccagtggtgcaatacaagct 11570114



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                           
Query: 399     atgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttacactgg 458
               ||||||||||| |||||||| ||||||||||  ||||| || ||||| ||||| ||||||
Sbjct: 7203689 atgtctatgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgg 7203748

                                               
Query: 459     gttaggatcttcacacaatcatcatcgctcca 490
               |  ||||||||||| || || |||||||||||
Sbjct: 7203749 gacaggatcttcacgcagtcgtcatcgctcca 7203780



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 141/174 (81%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                            
Query: 335      catgagtatgtccatca-gagtctgcgcctcaaacatgactggtcctaacgatggttcca 393
                |||||| |||||||||| ||| |||||| || ||||| || || || || |||||||| |
Sbjct: 11628628 catgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttcaa 11628686

                                                                            
Query: 394      ccacaatgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttac 453
                |||  || ||||||||||||| ||| || |||||||  ||||| ||||| || || || |
Sbjct: 11628687 ccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagcctttttgc 11628746

                                                                      
Query: 454      actgggttaggatcttcacacaatcatcatcgctccagtggtgcaacacaagct 507
                |||| | |||||||||||| || ||||| |||||| |||| ||||  |||||||
Sbjct: 11628747 actgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 11628800



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                                
Query: 588     ttgtcgatcaccttggggagatccagcacggtgcactttgatgtgcggg 636
               |||||||||||||| ||||| |||||||| |||||| ||||||||||||
Sbjct: 7204263 ttgtcgatcaccttcgggaggtccagcaccgtgcac-ttgatgtgcggg 7204310



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Plus

                                                                            
Query: 506      cttgagcatcaccgcctgagcctttgggacggtgtggaacaggtcaccgccgacatagtt 565
                |||||||||||| || ||||||  ||| ||||||||||||| ||||||  | ||||||||
Sbjct: 11573280 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 11573339

                                                                            
Query: 566      gactataccgtcagctgaagttttgtcgatcaccttggggagatccagcacggtgcactt 625
                 || | ||| |||   |  |  ||||||||||||||||| || |||||||| ||||||||
Sbjct: 11573340 aacgacaccatcattgggcgccttgtcgatcaccttgggaaggtccagcacagtgcactt 11573399



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                            
Query: 438      ggaatggcattcttacactgggttaggatcttcacacaatcatcatcgctccagtggtgc 497
                ||||| || |||||||| || ||||| || ||||||||||| || || ||||||||||| 
Sbjct: 11409012 ggaatagctttcttacattgagttagtattttcacacaatcctcgtcactccagtggtga 11409071

                          
Query: 498      aacacaagct 507
                | ||||||||
Sbjct: 11409072 agcacaagct 11409081



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 461      taggatcttcacacaatcatcatcgctccagtggtgcaacacaagct 507
                |||||||||||||||||| || ||  |||||||||| | ||||||||
Sbjct: 11433326 taggatcttcacacaatcctcgtcattccagtggtgaagcacaagct 11433372



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 462      aggatcttcacacaatcatcatcgctccagtggtgcaacaca 503
                ||||| |||||||| || |||||||||||||||  |||||||
Sbjct: 11564447 aggattttcacacagtcgtcatcgctccagtggctcaacaca 11564406
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 399   atgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttacactgg 458
             ||||||||||| |||||||| ||||||||||  ||||| || ||||| ||||| ||||||
Sbjct: 44837 atgtctatgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgg 44778

                                             
Query: 459   gttaggatcttcacacaatcatcatcgctcca 490
             |  ||||||||||| || || |||||||||||
Sbjct: 44777 gacaggatcttcacgcagtcgtcatcgctcca 44746



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 588   ttgtcgatcaccttggggagatccagcacggtgcactttgatgtgcggg 636
             |||||||||||||| ||||| |||||||| |||||| ||||||||||||
Sbjct: 44263 ttgtcgatcaccttcgggaggtccagcaccgtgcac-ttgatgtgcggg 44216
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                         
Query: 399   atgtctatgacaatcacctttcctccctcctcacgtgagggaatggcattcttacactgg 458
             ||||||||||| |||||||| ||||||||||  ||||| || ||||| ||||| ||||||
Sbjct: 50938 atgtctatgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgg 50997

                                             
Query: 459   gttaggatcttcacacaatcatcatcgctcca 490
             |  ||||||||||| || || |||||||||||
Sbjct: 50998 gacaggatcttcacgcagtcgtcatcgctcca 51029



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                              
Query: 588   ttgtcgatcaccttggggagatccagcacggtgcactttgatgtgcggg 636
             |||||||||||||| ||||| |||||||| |||||| ||||||||||||
Sbjct: 51512 ttgtcgatcaccttcgggaggtccagcaccgtgcac-ttgatgtgcggg 51559
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>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
           insert sequence
          Length = 1262

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 438 ggaatggcattcttacactgggttaggatcttcacacaatcatcatcgctccagtggtgc 497
           ||||| || |||||||| || ||||| || ||||||||||| || || ||||||||||| 
Sbjct: 942 ggaatagctttcttacattgagttagtattttcacacaatcctcgtcactccagtggtga 883

                            
Query: 498 aacacaagcttgagcat 514
           | |||||||||||||||
Sbjct: 882 agcacaagcttgagcat 866
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>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 770

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 501 acaagcttgagcatcaccgcctgagcctttgggacggtgtggaacaggtcaccgccgaca 560
           |||||||||||||| || ||||||||   ||||||||| ||||| ||||||||  |||||
Sbjct: 220 acaagcttgagcatgacggcctgagctggtgggacggtatggaagaggtcaccagcgaca 161

                
Query: 561 tagtt 565
           |||||
Sbjct: 160 tagtt 156
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                          
Query: 438    ggaatggcattcttacactgggttaggatcttcacacaatcatcatcgctccagtggtgc 497
              ||||| || |||||||| || ||||| || ||||||||||| || || ||||||||||| 
Sbjct: 116181 ggaatagctttcttacattgagttagtattttcacacaatcctcgtcactccagtggtga 116240

                        
Query: 498    aacacaagct 507
              | ||||||||
Sbjct: 116241 agcacaagct 116250



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 461    taggatcttcacacaatcatcatcgctccagtggtgcaacacaagct 507
              |||||||||||||||||| || ||  |||||||||| | ||||||||
Sbjct: 140495 taggatcttcacacaatcctcgtcattccagtggtgaagcacaagct 140541
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>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence
          Length = 111620

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 390   tccaccacaatgtctatgacaatcacctttcct 422
             |||||||| |||||||||| |||||||||||||
Sbjct: 15172 tccaccaccatgtctatgataatcacctttcct 15204
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
           insert sequence
          Length = 1300

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 462 aggatcttcacacaatcatcatcgctccagtggtgcaacacaagcttgagca 513
           ||||| |||||||| || |||||||||||||||  |||||||  ||||||||
Sbjct: 938 aggattttcacacagtcgtcatcgctccagtggctcaacacatacttgagca 887
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>gb|AY103669.1| Zea mays PCO073521 mRNA sequence
          Length = 1503

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 261  tcgctgaaccctgctttggtgaa 283
            |||||||||||||||||||||||
Sbjct: 1069 tcgctgaaccctgctttggtgaa 1047
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>gb|AF033496.1|AF033496 Zea mays herbicide safener binding protein (SBP1) mRNA, complete cds
          Length = 1438

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 261  tcgctgaaccctgctttggtgaa 283
            |||||||||||||||||||||||
Sbjct: 1067 tcgctgaaccctgctttggtgaa 1045
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>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence
          Length = 215150

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 139   ataaacaaagcacactgcatgc 160
             ||||||||||||||||||||||
Sbjct: 25688 ataaacaaagcacactgcatgc 25709
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 296     gtcactttcactacgctgacg 316
               |||||||||||||||||||||
Sbjct: 1351664 gtcactttcactacgctgacg 1351644
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>gb|AC124818.7| Mus musculus chromosome 14, clone RP24-505E8, complete sequence
          Length = 159170

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 8     tattggaaaaggaaatatgatacaa 32
             |||| ||||||||||||||||||||
Sbjct: 49690 tattagaaaaggaaatatgatacaa 49666
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>gb|AY372453.1| Uncultured marine proteobacterium ANT32C12 fosmid clone
          Length = 39378

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 5    aattattggaaaaggaaatat 25
            |||||||||||||||||||||
Sbjct: 9763 aattattggaaaaggaaatat 9783
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>gb|AY372452.1| Uncultured marine proteobacterium ANT8C10 fosmid clone
          Length = 37903

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     aattattggaaaaggaaatat 25
             |||||||||||||||||||||
Sbjct: 22274 aattattggaaaaggaaatat 22294
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>gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosome 14, complete sequence
          Length = 208135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 8      tattggaaaaggaaatatgatacaa 32
              |||| ||||||||||||||||||||
Sbjct: 207329 tattagaaaaggaaatatgatacaa 207305
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>gb|U40947.1| Caenorhabditis elegans cosmid R03E9, complete sequence
          Length = 41950

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 380  taacgatggttccaccacaatgtct 404
            ||||||||||||| |||||||||||
Sbjct: 7940 taacgatggttcctccacaatgtct 7964
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>emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chromosome X, complete
             sequence
          Length = 209800

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 319   ctctcgtgaagacaagcatga 339
             |||||||||||||||||||||
Sbjct: 57719 ctctcgtgaagacaagcatga 57699
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>ref|XM_480481.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 agcacactgcatgcaagggt 166
           ||||||||||||||||||||
Sbjct: 552 agcacactgcatgcaagggt 533
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>gb|AC004037.1| Homo sapiens chromosome 5, BAC clone 64o24, BAC 5001 (LBNL H101),
           complete sequence
          Length = 32424

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  aaaaggaaatatgatacaaa 33
           ||||||||||||||||||||
Sbjct: 546 aaaaggaaatatgatacaaa 527
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 464     gatcttcacacaatcatcatcgctccagtggtgcaa 499
               |||||||||| | || ||||||||||||| ||||||
Sbjct: 1449451 gatcttcacatagtcctcatcgctccagtcgtgcaa 1449416
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>emb|Z92543.1|HS271G9 Human DNA sequence from clone RP1-271G9 on chromosome 6q22, complete
             sequence
          Length = 120376

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ttaattattggaaaaggaaa 22
             ||||||||||||||||||||
Sbjct: 65117 ttaattattggaaaaggaaa 65136
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>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains
              the gene for a novel protein (zgc:56546), the gene for a
              novel protein similar to the Tctex-1 family, the gene for a
              novel protein similar to vertebrate tubby like protein 4
              (TULP4), the gene for a novel protein similar to vertebrate
              mitochondrial ribosomal protein S10 (MRPS10), the 3' end of
              a novel gene, two novel genes and three CpG islands,
              complete sequence
          Length = 189764

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    tcttttgacaattttataat 261
              ||||||||||||||||||||
Sbjct: 124745 tcttttgacaattttataat 124726
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>gb|AC129713.1| Homo sapiens chromosome 5 clone RP11-391B2, complete sequence
          Length = 65846

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  aaaaggaaatatgatacaaa 33
           ||||||||||||||||||||
Sbjct: 339 aaaaggaaatatgatacaaa 320
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
              from chromosome 3, complete sequence
          Length = 147806

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 464    gatcttcacacaatcatcatcgctccagtggtgcaa 499
              |||||||||| | || ||||||||||||| ||||||
Sbjct: 110954 gatcttcacatagtcctcatcgctccagtcgtgcaa 110919
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>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   cttttgacaattttataatc 262
             ||||||||||||||||||||
Sbjct: 48038 cttttgacaattttataatc 48057
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 147     agcacactgcatgcaagggt 166
               ||||||||||||||||||||
Sbjct: 5376615 agcacactgcatgcaagggt 5376634
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 464     gatcttcacacaatcatcatcgctccagtggtgcaa 499
               |||||||||| | || ||||||||||||| ||||||
Sbjct: 1449449 gatcttcacatagtcctcatcgctccagtcgtgcaa 1449414
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>gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 sequence, complete sequence
          Length = 70116

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aattattggaaaaggaaata 24
             ||||||||||||||||||||
Sbjct: 11508 aattattggaaaaggaaata 11527
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>gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M13, complete sequence
          Length = 125764

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aaaaggaaatatgatacaaa 33
             ||||||||||||||||||||
Sbjct: 11658 aaaaggaaatatgatacaaa 11677
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>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   agcacactgcatgcaagggt 166
             ||||||||||||||||||||
Sbjct: 46426 agcacactgcatgcaagggt 46445
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>emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 in linkage group 4,
             complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   tcttttgacaattttataat 261
             ||||||||||||||||||||
Sbjct: 72864 tcttttgacaattttataat 72883
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>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence
          Length = 214005

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   tacataaacaaagcacactg 155
             ||||||||||||||||||||
Sbjct: 31022 tacataaacaaagcacactg 31003
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>emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chromosome 18, complete
             sequence
          Length = 174264

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 237   cccagtcttttgacaattttataa 260
             ||||||||| ||||||||||||||
Sbjct: 33435 cccagtcttctgacaattttataa 33458
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>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete
              sequence
          Length = 176773

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 237    cccagtcttttgacaattttataa 260
              ||||||||| ||||||||||||||
Sbjct: 156054 cccagtcttctgacaattttataa 156077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,064,736
Number of Sequences: 3902068
Number of extensions: 5064736
Number of successful extensions: 94879
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94567
Number of HSP's gapped (non-prelim): 309
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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