| Clone Name | rbags18a05 |
|---|---|
| Clone Library Name | barley_pub |
>GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.-.-.-)| (GID1-like protein 2) Length = 358 Score = 59.3 bits (142), Expect = 1e-08 Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Frame = -1 Query: 686 EPVKVVAQVLMYPFFIGSVPTHSEIRLANSYFYDKSTCLLAWRLLLSEKEFSLDHPAANP 507 E VKV+ +L++P F G T SE L YF WR L E E DHPA NP Sbjct: 207 EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGE-DRDHPACNP 265 Query: 506 LAPGRGGPPLKCM--PPTLTIVAEHDCMRDRAIAYSEELRKVNVDAPVLDYKDTVHEF 339 P G LK + P +L +VA D ++D +AY + L+K ++ +L K F Sbjct: 266 FGP--RGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGF 321
>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)| (GID1-like protein 1) Length = 345 Score = 53.9 bits (128), Expect = 5e-07 Identities = 33/105 (31%), Positives = 50/105 (47%) Frame = -1 Query: 680 VKVVAQVLMYPFFIGSVPTHSEIRLANSYFYDKSTCLLAWRLLLSEKEFSLDHPAANPLA 501 + V+ +L+ P F G+ T SE L YF W+ L E E +HPA NP + Sbjct: 209 IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGE-DREHPACNPFS 267 Query: 500 PGRGGPPLKCMPPTLTIVAEHDCMRDRAIAYSEELRKVNVDAPVL 366 P P +L +VA D +RD +AY+E L+K + ++ Sbjct: 268 PRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLM 312
>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)| (GID1-like protein 3) Length = 344 Score = 53.1 bits (126), Expect = 8e-07 Identities = 37/119 (31%), Positives = 54/119 (45%) Frame = -1 Query: 722 VTXKAVEDAKQFEPVKVVAQVLMYPFFIGSVPTHSEIRLANSYFYDKSTCLLAWRLLLSE 543 V +AVE + V+ +L+ P F G+ T SE RL YF WR L E Sbjct: 198 VAVRAVESR-----IDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPE 252 Query: 542 KEFSLDHPAANPLAPGRGGPPLKCMPPTLTIVAEHDCMRDRAIAYSEELRKVNVDAPVL 366 E +HPA +P P P +L +VA D ++D + Y+E L+K + +L Sbjct: 253 GE-DREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLL 310
>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)| (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) Length = 354 Score = 51.2 bits (121), Expect = 3e-06 Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Frame = -1 Query: 686 EPVKVVAQVLMYPFFIGSVPTHSEIRLANSYFYDKSTCLLAWRLLLSEKEFSLDHPAANP 507 E VKV +L+ F G+ T SE RL YF W+ L E + DHPA NP Sbjct: 214 EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPE-DADRDHPACNP 272 Query: 506 LAP-GR--GGPPLKCMPPTLTIVAEHDCMRDRAIAYSEELRK 390 P GR GG P +L IV+ D DR +AY++ LR+ Sbjct: 273 FGPNGRRLGGLP---FAKSLIIVSGLDLTCDRQLAYADALRE 311
>LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 433 Score = 32.3 bits (72), Expect = 1.5 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -1 Query: 521 PAANPLAPGRGGPPLKCMPPTLTIVAEHDCMRDRAIAYSEELRKVNVDAPVLDYKDTVHE 342 P ++PL G + + P+ +VAE D +RD +AY+E L+K V H Sbjct: 334 PQSHPLISVMHGDNTQ-LCPSYIVVAELDILRDEGLAYAELLQKEGVQVQTYTVLGAPHG 392 Query: 341 FATL 330 F L Sbjct: 393 FINL 396
>SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 640 Score = 30.4 bits (67), Expect = 5.8 Identities = 22/63 (34%), Positives = 28/63 (44%) Frame = +2 Query: 320 GTHQVLRTHGPYLCSQGLAHPHLPCGVPQSKQLLYPSYSRVPQRLSRLGACISVVGLLCQ 499 G +V + L S+ HP P VPQ L PS + P + LG C+S G C Sbjct: 578 GAREVASSPVSALPSRFCPHPTSP-SVPQPGPTLPPSLTAPPPAYATLGPCLSQSGSAC- 635 Query: 500 GPG 508 PG Sbjct: 636 APG 638
>LRP_CAEEL (Q04833) Low-density lipoprotein receptor-related protein precursor| (LRP) Length = 4753 Score = 29.6 bits (65), Expect = 9.8 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 672 CSSGFDVSLLHRKCSNTLGNKACKLILL*QIHMLTCLEITFI 547 CS G+D + H C++T G K C L Q L C+ FI Sbjct: 2986 CSDGWDET--HTNCTDTAGKKICVGDYLFQCDNLKCISRAFI 3025
>MEC4_CAEEL (P24612) Degenerin mec-4 (Mechanosensory abnormality protein 4)| Length = 768 Score = 29.6 bits (65), Expect = 9.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 240 LVPSQGYVFLHPYGNIFGTGLGLWCLEEHIKCCELM 347 L S+ Y F++ + FG LGLWC + CCE + Sbjct: 700 LTESEAYGFVNLLAD-FGGQLGLWCGISFLTCCEFV 734
>MEC4_CAEBR (Q17298) Degenerin mec-4 (Mechanosensory protein 4)| Length = 768 Score = 29.6 bits (65), Expect = 9.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 240 LVPSQGYVFLHPYGNIFGTGLGLWCLEEHIKCCELM 347 L S+ Y F++ + FG LGLWC + CCE + Sbjct: 700 LTESEAYGFVNLLAD-FGGQLGLWCGISFLTCCEFV 734
>YNG5_SCHPO (O13621) Hypothetical protein C691.05c in chromosome II| Length = 668 Score = 29.6 bits (65), Expect = 9.8 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 255 GYVFLHPYGNIFGTGLGLW 311 GY FL PY IF G+ LW Sbjct: 202 GYYFLRPYSYIFAIGVALW 220 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,561,129 Number of Sequences: 219361 Number of extensions: 2585580 Number of successful extensions: 6727 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 6434 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6722 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7422931207 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)