>COX2_PAPHA (P68298) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 419 LKGTQTVKRTVTNVADEAETYTIMTRMSPEIALDVSPPALTVL 291
           L  T T K T TN+ D  E  TI T +   I + ++ P+L +L
Sbjct: 42  LSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRIL 84

>COX2_PAPAN (P68297) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 419 LKGTQTVKRTVTNVADEAETYTIMTRMSPEIALDVSPPALTVL 291
           L  T T K T TN+ D  E  TI T +   I + ++ P+L +L
Sbjct: 42  LSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRIL 84

>COX2_THEGE (P98044) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 419 LKGTQTVKRTVTNVADEAETYTIMTRMSPEIALDVSPPALTVL 291
           L  T T K T TN+ D  E  TI T +   I + ++ P+L +L
Sbjct: 42  LSATLTTKLTNTNITDAQEMETIWTILPAVILVLIALPSLRIL 84

>CYTSA_XENTR (Q2KN96) Cytospin-A|
          Length = 1101

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = -2

Query: 446  NIPSITVSQLKGTQTVKRTVTNVAD--EAETYTIMTRMSPEIALDVSPPALTVLPGSSRE 273
            N  SI+VS+ + ++ +KR ++ V D   A +  +MT  SP+++L  S P  +V P +   
Sbjct: 920  NAKSISVSR-RSSEELKRDIS-VPDGSSAPSLMVMTSPSPQLSLSSSSPTASVTPTARSR 977

Query: 272  I 270
            I
Sbjct: 978  I 978

>COX2_PONPY (Q37605) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 410 TQTVKRTVTNVADEAETYTIMTRMSPEIALDVSPPALTVL 291
           T T K T TN++D  E  TI T +   I + ++ P+L +L
Sbjct: 45  TLTTKLTNTNISDAQEMETIWTTLPAIILILIALPSLRIL 84

>YNE1_CAEEL (P30640) Hypothetical protein R08D7.1|
          Length = 458

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -1

Query: 351 HDQDVAGDRAGRLTSRADGAPWVI*RDHRDPHDEDGDRYLQFRRDHD-EG*PAPPSQ 184
           HD D +  R  R  + +D +P    R  R+ HD D D     RR HD +  P  PS+
Sbjct: 112 HDSDNSPPRPSRKRNDSDNSPP---RPSRNRHDSDKDNSPPRRRRHDSDNSPPRPSR 165

>YN53_CAEEL (P34587) Hypothetical protein ZC21.3|
          Length = 321

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 37  HNTDNTSLPNYVGSYCSYQTTKYYNTP 117
           ++ D+ S  + V S C YQT + YNTP
Sbjct: 279 YSADSISCCSQVSSTCCYQTQQGYNTP 305

>COX2_MACFA (P11948) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 410 TQTVKRTVTNVADEAETYTIMTRMSPEIALDVSPPALTVL 291
           T T K T TN+ D  E  TI T +   I + ++ P+L VL
Sbjct: 45  TLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRVL 84

>HHAT_MOUSE (Q8BMT9) Protein-cysteine N-palmitoyltransferase HHAT (EC 2.3.1.-)|
           (Hedgehog acyltransferase) (Skinny hedgehog protein)
          Length = 499

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = -3

Query: 175 WLPWGSNRVVYCSLMML*AEECCNIL*FGRNNKSRRNSVMMY----CLCYDGAPG 23
           W+ WG  R+V+  +  +   +   +L      K R   VM+Y    C C  GAPG
Sbjct: 63  WMEWGKRRLVWLFIGHMAVSQLATLL----TKKHRPWIVMVYGMWACWCVLGAPG 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,481,292
Number of Sequences: 219361
Number of extensions: 1360135
Number of successful extensions: 3307
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3304
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)