Clone Information

BLAST Search Result

Clone Name	rbags17k16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like pr...	156	2e-55
2	DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like pr...	134	3e-46
3	DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like pr...	137	8e-44
4	DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like pr...	131	1e-42
5	DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like pr...	127	9e-42
6	DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr...	55	2e-07
7	DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr...	55	2e-07
8	DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)	40	0.007
9	DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)	40	0.007
10	DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)	40	0.009
11	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	39	0.015
12	DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)	39	0.020
13	DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (...	38	0.034
14	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	37	0.044
15	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	37	0.058
16	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	37	0.058
17	DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr...	36	0.13
18	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	35	0.17
19	YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08	35	0.22
20	COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor	35	0.29
21	DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like pr...	34	0.49
22	SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)	33	0.64
23	WOX3A_MAIZE (Q70UV1) WUSCHEL-related homeobox 3A (Narrow sheath ...	33	1.1
24	VPS1_YEAST (P21576) Vacuolar sorting protein 1	33	1.1
25	COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undu...	32	1.4
26	ECI1_YEAST (Q05871) 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) (...	32	1.4
27	WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel s...	32	1.9
28	CN044_MOUSE (Q8CB59) Protein C14orf44 homolog	32	2.4
29	PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phospha...	32	2.4
30	CUTL2_MOUSE (P70298) Homeobox protein cut-like 2 (Homeobox prote...	32	2.4
31	MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-man...	32	2.4
32	BLA1_MORCA (Q59514) Beta-lactamase BRO-1 precursor (EC 3.5.2.6) ...	31	3.2
33	WOX3B_MAIZE (Q6S3I3) WUSCHEL-related homeobox 3B (Narrow sheath ...	31	3.2
34	SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S...	31	4.1
35	EXOF_RHIME (Q02728) Exopolysaccharide production protein exoF pr...	31	4.1
36	DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4	30	5.4
37	K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)	30	5.4
38	COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undu...	30	5.4
39	DOCK4_HUMAN (Q8N1I0) Dedicator of cytokinesis protein 4	30	5.4
40	IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD an...	30	7.1
41	SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Sp...	30	7.1
42	DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)	30	7.1
43	K0179_HUMAN (Q14684) Protein KIAA0179	30	7.1
44	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	30	7.1
45	OVO_DROME (P51521) Protein ovo (Protein shaven baby)	30	7.1
46	CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-ch...	30	7.1
47	PDX1_NEUCR (Q9C1K6) Probable pyridoxin biosynthesis protein pdx-1	30	9.2

>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score =  156 bits (395), Expect(2) = 2e-55
 Identities = 73/99 (73%), Positives = 88/99 (88%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D Y DNH R+IGSNVS+YINMVCDTLRN++PKAVV+CQV+EAKR+LLN FYA VG KEK+
Sbjct: 516 DPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKE 575

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVAWK 213
           +L AMLDEDP LME+R +L K+LELYK AR++ID+VAWK
Sbjct: 576 KLGAMLDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 614



 Score = 79.3 bits (194), Expect(2) = 2e-55
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = -3

Query: 678 SDIAAAANESLERFREDGRKTVIRLVDMEASYLTVEFFRKLPTEPDKGANN 526
           SDIAAAANE+LERFR++ RKTV+RLVDME+SYLTVEFFRKL  EP+K   N
Sbjct: 456 SDIAAAANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPN 506

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>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score =  134 bits (337), Expect(2) = 3e-46
 Identities = 63/98 (64%), Positives = 78/98 (79%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D+Y D H RRI SNVS+Y+NMV DTLRNTIPKA V+CQV++AK  LLN FY+ +  +E K
Sbjct: 525 DQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGK 584

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVAW 216
           QL  +LDEDPALM++R    K+LELYK AR+EID+VAW
Sbjct: 585 QLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAW 622



 Score = 71.2 bits (173), Expect(2) = 3e-46
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = -3

Query: 681 QSDIAAAANESLERFREDGRKTVIRLVDMEASYLTVEFFRKLPTEPDKGANNN 523
           Q ++AAAAN SLE+FRE+ +K+VIRLVDME++YLT EFFRKLP E ++   N+
Sbjct: 460 QVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIERPVTNS 512

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>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score =  137 bits (344), Expect(2) = 8e-44
 Identities = 60/98 (61%), Positives = 88/98 (89%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           DRY D++LRRIGSNV SY+NMVC  LRN+IPK++V+CQV+EAKR+LL+ F+A +G+ + K
Sbjct: 511 DRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMK 570

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVAW 216
           +LS++L+EDPA+ME+R ++ K+LELY++A++EID+VAW
Sbjct: 571 RLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAW 608



 Score = 60.5 bits (145), Expect(2) = 8e-44
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = -3

Query: 675 DIAAAANESLERFREDGRKTVIRLVDMEASYLTVEFFRKLPTEPDKGAN 529
           ++  AA ESL++ RE  +K  ++LVDME SYLTV+FFRKLP + +KG N
Sbjct: 456 EVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGN 504

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>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score =  131 bits (330), Expect(2) = 1e-42
 Identities = 59/98 (60%), Positives = 82/98 (83%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           DRY D +LRRIGSNV SY+NMVC  LRN+IPK++V+CQV+EAKR+LL+ F+  +G KE  
Sbjct: 511 DRYNDAYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMS 570

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVAW 216
           +LS +LDEDPA+ ++R S+ K+LELY+SA+ +I++VAW
Sbjct: 571 KLSKLLDEDPAVQQRRTSIAKRLELYRSAQTDIEAVAW 608



 Score = 62.0 bits (149), Expect(2) = 1e-42
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -3

Query: 675 DIAAAANESLERFREDGRKTVIRLVDMEASYLTVEFFRKLPTEPDKGAN 529
           +++ AA +SL+R R++ RK  + LVDME+ YLTVEFFRKLP + +KG N
Sbjct: 456 EVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSEKGGN 504

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>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score =  127 bits (320), Expect(2) = 9e-42
 Identities = 61/111 (54%), Positives = 80/111 (72%)
 Frame = -1

Query: 548 NQTKELTITLRANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLL 369
           +Q   L+    A D+Y D H R+I SNV++YI MV +TL NTIPKAVVHCQV++AK +LL
Sbjct: 500 SQNMSLSSPTSAIDQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLL 559

Query: 368 NRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVAW 216
           N FYA +   + K+L  +LDE+PALME+R    K+LELYK AR+EID+  W
Sbjct: 560 NYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 610



 Score = 62.8 bits (151), Expect(2) = 9e-42
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = -3

Query: 681 QSDIAAAANESLERFREDGRKTVIRLVDMEASYLTVEFFRKLPTE 547
           Q ++ AAAN SL++FRE+  K+V+RLVDME+SYLTV+FFRKL  E
Sbjct: 455 QIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVE 499

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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
            (Dynamin-like protein 3)
          Length = 920

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 24/89 (26%), Positives = 50/89 (56%)
 Frame = -1

Query: 497  DNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSA 318
            +  LR +   V  Y+  V ++L   +PKAVV CQV+++K ++LN+ Y+ + +   +++ +
Sbjct: 734  EEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIES 793

Query: 317  MLDEDPALMEKRDSLVKKLELYKSARNEI 231
            ++ ED  +  +RD   K+  L      ++
Sbjct: 794  LIQEDQNVKRRRDRYQKQSSLLSKLTRQL 822

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>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 24/89 (26%), Positives = 50/89 (56%)
 Frame = -1

Query: 497 DNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSA 318
           +  LR +   V  Y+  V ++L   +PKAVV CQV++AK ++LN+ Y+ + +   +++ +
Sbjct: 727 EEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIES 786

Query: 317 MLDEDPALMEKRDSLVKKLELYKSARNEI 231
           ++ ED  +  +R+   K+  L      ++
Sbjct: 787 LIQEDQNVKRRRERYQKQSSLLSKLTRQL 815

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>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 20/97 (20%), Positives = 49/97 (50%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D   +  +  I + V SY+ ++  ++R+ +PK ++H  +   K  + +   A++ S   +
Sbjct: 646 DPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQ 705

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVA 219
             S++++E     ++RD +++     K A N I  ++
Sbjct: 706 --SSLMEESAEQAQRRDDMLRMYHALKEALNIIGDIS 740

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>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)|
          Length = 870

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 20/97 (20%), Positives = 49/97 (50%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D   +  +  I + V SY+ ++  ++R+ +PK ++H  +   K  + +   A++ S   +
Sbjct: 646 DPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQ 705

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVA 219
             S++++E     ++RD +++     K A N I  ++
Sbjct: 706 --SSLMEESAEQAQRRDDMLRMYHALKEALNIIGDIS 740

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>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 20/97 (20%), Positives = 49/97 (50%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D   +  +  I + V SY+ ++  ++R+ +PK ++H  +   K  + +   A++ S   +
Sbjct: 646 DPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQ 705

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVA 219
             S++++E     ++RD +++     K A N I  ++
Sbjct: 706 --SSLMEESADQAQRRDDMLRMYHALKEALNIIGDIS 740

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 20/97 (20%), Positives = 48/97 (49%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D   +  +  I + V SY++++   +R+ IPK ++H  +   K  + +   A + S E +
Sbjct: 642 DPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSEDQ 701

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVA 219
             + +++E     ++RD +++  +  K A   I  ++
Sbjct: 702 --NTLMEESAEQAQRRDEMLRMYQALKEALGIIGDIS 736

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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 22/96 (22%), Positives = 46/96 (47%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D   +  +  I + V SY+ ++  T+++ +PKAV+H  V +    + +   AH+   +  
Sbjct: 646 DPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHL--YQCG 703

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 222
              A+++E     +KR+ +++     K A   I  V
Sbjct: 704 DTDALMEESQIEAQKREEMLRMYHACKEALRIISEV 739

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>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 19/89 (21%), Positives = 45/89 (50%)
 Frame = -1

Query: 509 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 330
           D   +  +  I + V SY++++   +R+ IPK ++H  +   K  + +   A + S E +
Sbjct: 642 DPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSEDQ 701

Query: 329 QLSAMLDEDPALMEKRDSLVKKLELYKSA 243
             + +++E     ++RD +++  +  K A
Sbjct: 702 --NTLMEESVEQAQRRDEMLRMYQALKEA 728

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>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 20/100 (20%), Positives = 50/100 (50%)
 Frame = -1

Query: 521 LRANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGS 342
           + + D   +  +  I + V SY+ +V  T+R+ +PK ++H  +   K  + +   A++ S
Sbjct: 648 MHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS 707

Query: 341 KEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 222
              +  + +++E     ++RD +++     K A + I ++
Sbjct: 708 CGDQ--NTLMEESAEQAQRRDEMLRMYHALKEALSIIGNI 745

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>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 20/100 (20%), Positives = 49/100 (49%)
 Frame = -1

Query: 521 LRANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGS 342
           + + D   +  +  I + V SY+ +V  T+R+ +PK ++H  +   K  + +   A++ S
Sbjct: 648 MHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS 707

Query: 341 KEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 222
              +  + +++E     ++RD +++     K A + I  +
Sbjct: 708 CGDQ--NTLMEESAEQAQRRDEMLRMYHALKEALSIIGDI 745

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>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 20/100 (20%), Positives = 49/100 (49%)
 Frame = -1

Query: 521 LRANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGS 342
           + + D   +  +  I + V SY+ +V  T+R+ +PK ++H  +   K  + +   A++ S
Sbjct: 648 MHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYS 707

Query: 341 KEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 222
              +  + +++E     ++RD +++     K A + I  +
Sbjct: 708 CGDQ--NTLMEESAEQAQRRDEMLRMYHALKEALSIIGDI 745

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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
           (Dynamin-like protein 2a)
          Length = 808

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
 Frame = -1

Query: 566 SGNFLLNQTKELTITLRANDRYQDNHLRRIGSN---VSSYINMVCDTLRNTIPKAVVHCQ 396
           S N  +   KE    LR  + + +     I      + SY ++V   + +++PKA++H  
Sbjct: 641 SHNLSMIYLKEPPAVLRPTETHSEQEAVEIQITKLLLRSYYDIVRKNIEDSVPKAIMHFL 700

Query: 395 VKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 222
           V   KR L N F   +    +     ML E   +  KR    + L + + A   +D +
Sbjct: 701 VNHTKRELHNVFIKKL--YRENLFEEMLQEPDEIAVKRKRTQETLHVLQQAYRTLDEL 756

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 22/99 (22%), Positives = 47/99 (47%)
 Frame = -1

Query: 515 ANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKE 336
           ++D   +  +  I + V SY+ +V  T R+ +PKA++   +  AK  +     AH+ +  
Sbjct: 641 SSDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLAHLYASG 700

Query: 335 KKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVA 219
            +  + M++E      +R+ +++     K A   I  V+
Sbjct: 701 DQ--AQMMEESAESATRREEMLRMYRACKDALQIIGDVS 737

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>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 22/103 (21%), Positives = 47/103 (45%)
 Frame = -1

Query: 530 TITLRANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAH 351
           T+ L      ++  +  I   ++SY N+    + + +PK ++H  V  +K  + NR  + 
Sbjct: 680 TMALEDMSEREEVEVDLIKELITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQNRLVSK 739

Query: 350 VGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 222
           +  ++      +L ED  +  +R+   + L +Y  A   I +V
Sbjct: 740 LYRED--FFDTLLIEDENVKSEREKCERLLSVYNQANKIISTV 780

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>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor|
          Length = 1797

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +2

Query: 152  RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 304
            R   R +C    QS   R   I++  PS+S S+RT   P    G P SP T G
Sbjct: 1618 RAVARQVCEQLIQSHMARYTAILNQIPSQSSSIRTIQGPPGEPGRPGSPGTPG 1670

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>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)|
          Length = 780

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = -1

Query: 467 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 288
           + SY ++V   + + +PKA++H  V   KR L N F   +    +  +  +L E   L  
Sbjct: 661 LKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNVFIEKL--YRENLIEELLKEPDELAI 718

Query: 287 KRDSLVKKLELYKSARNEIDSV 222
           KR    + L + + A   +D +
Sbjct: 719 KRKRTQETLRILQQANRTLDEL 740

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>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +2

Query: 125 KAYAKRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 304
           + Y  R + R   R    S  +S    + +S   SRSRS        SSR +P+  ++R 
Sbjct: 193 REYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRS 252

Query: 305 PRPASRS 325
           P P S+S
Sbjct: 253 PGPRSKS 259

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>WOX3A_MAIZE (Q70UV1) WUSCHEL-related homeobox 3A (Narrow sheath protein 1)|
          Length = 262

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 23/88 (26%), Positives = 38/88 (43%)
 Frame = +2

Query: 137 KRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 316
           K  ER+  +R +C+ H+Q     Q             T  APASS  + ++  +     +
Sbjct: 61  KARERQRLRRRLCARHQQQYAQQQA------------TAAAPASSPNSSATVPSLAAGGS 108

Query: 317 SRSAAFSLCFLHAHRNG*AGFFLPPSLG 400
           S     ++  LH H++  A  F+P  LG
Sbjct: 109 SAGVHPAVMQLHHHQHPYATNFMPHQLG 136

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>VPS1_YEAST (P21576) Vacuolar sorting protein 1|
          Length = 704

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = -1

Query: 467 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRN----LLNRFYAHVGSKEKKQLSAMLDEDP 300
           +SSY ++V  T+ + IPKA++   + ++K +    LL + Y       K+ +  +  E+ 
Sbjct: 625 ISSYFSIVKRTIADIIPKALMLKLIVKSKTDIQKVLLEKLYG------KQDIEELTKEND 678

Query: 299 ALMEKRDSLVKKLELYKSARNEIDSV 222
             +++R    K +E+ ++A   + SV
Sbjct: 679 ITIQRRKECKKMVEILRNASQIVSSV 704

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>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1796

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 152  RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 304
            R   R +C    QS   R   I++  PS S S+RT   P    G P SP   G
Sbjct: 1617 RSVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGSPGAPG 1669

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>ECI1_YEAST (Q05871) 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) (Dodecenoyl-CoA|
           isomerase) (Delta(3),delta(2)-enoyl-CoA isomerase)
           (D3,D2-enoyl-CoA isomerase)
          Length = 280

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 311 PASRSAAFSLCFLHAHRNG*AGFFLPPSLGSARLLSESCSSMYRKPC*CKMIHSIRFFED 490
           P+S + AF+   L   R    G +LP  LG  +LL  +    + K    ++  S++++ D
Sbjct: 202 PSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNESLKYWVD 261

Query: 491 GYP 499
           G P
Sbjct: 262 GEP 264

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>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister|
            chromatids)
          Length = 1741

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
 Frame = +3

Query: 144  WSVATTNVLSVPATNSPSDQIRSFPCNRVDLVPCGLVQLQLLHE--------GIPLLHQR 299
            + + +  ++  P+    S++       R  LVP   V + L H         G  LL QR
Sbjct: 1412 YRLCSRQIMLHPSDGGGSNKEHPGVAMRELLVPVLKVLINLTHTFNEAQPSLGAELLGQR 1471

Query: 300  GVLVQHRAQLLFLFASYMRIETVEQVSFCLLHLAVHDC 413
            G +V+   +LL L A+Y+  + V ++S  +L L ++ C
Sbjct: 1472 GDVVETSFRLLLLSANYIPDQCVFELSILVLTLLINLC 1509

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>CN044_MOUSE (Q8CB59) Protein C14orf44 homolog|
          Length = 589

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +2

Query: 119 VYKAYAKRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPST 298
           +YKA+ KR   R   R       ++ R+   +    + S + R+C A  +  G  S   T
Sbjct: 377 LYKAFQKRAAERRETR-------ETTRNKPFLLRTANLSHTPRSCDAATAGGGKKSPQPT 429

Query: 299 RGPRPASRS----AAFSLCFLHAH 358
             P P SRS    A+FS   L  H
Sbjct: 430 ATPLPRSRSLSGLASFSANTLPVH 453

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>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC|
           3.1.3.16) (Pleckstrin homology domain-containing family
           E protein 1) (Suprachiasmatic nucleus circadian
           oscillatory protein)
          Length = 1696

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 230 RSRSLRTCTAPASSRGNPSSPSTR-GPRPASRSAAFSLC 343
           R R  R  +A ASS  +PSS S+  G  PAS SA+ SLC
Sbjct: 104 RGRLKRNLSAAASSSSSPSSASSAAGGLPASCSASASLC 142

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>CUTL2_MOUSE (P70298) Homeobox protein cut-like 2 (Homeobox protein Cux-2)|
            (Cut-like 2)
          Length = 1426

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +2

Query: 167  SICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 316
            S C S E    S  +IS     S  L TC +PA S   P SPS  G  PA
Sbjct: 1326 SSCCSLEGPPNSPSVIS-----SPDLTTCVSPAPSSSAPISPSLPGAPPA 1370

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>MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-mannoside|
           mannohydrolase)
          Length = 1083

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = +3

Query: 141 EWSVATTNVLSVPATNSPSDQIRSF-----PCNRVDLVPCGLVQLQLLHEGIPLLH 293
           EW  A T+VL   +   PS QI         C   D++P   +++   +E +P+LH
Sbjct: 592 EWIAAKTSVLYPDSYKYPSKQINELWENVLLCQFHDVLPGSCIEMVYKYEAVPMLH 647

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>BLA1_MORCA (Q59514) Beta-lactamase BRO-1 precursor (EC 3.5.2.6)|
           (Penicillinase)
          Length = 313

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 563 GNFLLNQTKELTITLRANDRYQDNHLRR 480
           GN L NQ+KE  IT   ND+  DN LR+
Sbjct: 217 GNILSNQSKEQLITWLINDKVADNLLRK 244

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>WOX3B_MAIZE (Q6S3I3) WUSCHEL-related homeobox 3B (Narrow sheath protein 2)|
          Length = 265

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = +2

Query: 137 KRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 316
           K  ER+  +R +C+ H+Q          Q ++ +   T  APASS   P+S +T    PA
Sbjct: 61  KARERQRLRRRLCARHQQ----------QYAQQQQQATAAAPASS---PNSSATLLAPPA 107

Query: 317 SRSAAF-----SLCFLHAHRNG*AGFFLPPSLG 400
           +  ++      ++  LH H +  A  F  P LG
Sbjct: 108 AGGSSAPCVHPAVMQLHHHHHPYATSFSMPHLG 140

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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 23/58 (39%), Positives = 26/58 (44%)
 Frame = +2

Query: 152 RYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRS 325
           RY +      H  S RS    S+ PSRSRSL        SR +  SPS    R  SRS
Sbjct: 463 RYRRGGRGLRHHSSSRSRSSWSLSPSRSRSL------TRSRSHSPSPSQSRSRSRSRS 514

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>EXOF_RHIME (Q02728) Exopolysaccharide production protein exoF precursor|
          Length = 421

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
 Frame = -1

Query: 431 RNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ---LSAMLD-------EDPALMEKR 282
           R+TIP       V +A++ LL+   A + S++K+Q   L A+ D       E  AL +K 
Sbjct: 203 RDTIPMPEELKNVPDAEK-LLDSETALMESRDKRQKRQLDALADLRSLLQSEIEALAKKA 261

Query: 281 DSLVKKLELYKSARNEIDSVAWK 213
           ++  ++LEL    R+++DS+A K
Sbjct: 262 ETQARQLELATEDRDKVDSLAEK 284

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>DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4|
          Length = 1978

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 188  QSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRP 313
            QS  SD++ +MQPS S S  + T  AS     S+PS+    P
Sbjct: 1669 QSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAPSSARASP 1710

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>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)|
          Length = 1157

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -3

Query: 459 LHQHGLRYIEEHDSESSRALPSEGGKKKPAQPFLC--ACRKQREKAAERDAGRGPRVDGE 286
           LH  G+RY  E    S  AL SE      A+        R++RE+  ER+  R    + E
Sbjct: 239 LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADRERE 298

Query: 285 EGFPREEAGAVQVRKERDR 229
           +   RE     +  KER+R
Sbjct: 299 KEREREREKEREQEKERER 317

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>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1888

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query: 152  RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 304
            R   R +C    Q    R + I++  PS+S S RT   P    G P +P  +G
Sbjct: 1627 RAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQG 1679

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>DOCK4_HUMAN (Q8N1I0) Dedicator of cytokinesis protein 4|
          Length = 1966

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 188  QSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRP 313
            QS  SD++ +MQPS S S  + T  AS     S+PS+    P
Sbjct: 1660 QSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAPSSARASP 1701

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>IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD and|
            tetratricopeptide repeats protein 2)
          Length = 1462

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 15/73 (20%), Positives = 34/73 (46%)
 Frame = -1

Query: 431  RNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELY 252
            R  + + +  C +++   +L  + Y   G+K K   + +   D   +    S+ ++ E+Y
Sbjct: 1188 RRELLEQIADCCMRQGSYHLATKKYTQAGNKLKAMRALLKSGDTEKITFFASVSRQKEIY 1247

Query: 251  KSARNEIDSVAWK 213
              A N + S+ W+
Sbjct: 1248 IMAANYLQSLDWR 1260

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>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor|
           9G8)
          Length = 238

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 149 RRYYKRSICSSHEQSIRSDQIISMQPSRSRSL-RTCTAPASSRGNPSSPSTRGPRPASRS 325
           RR    S+  S   SI+  +     PSRSRS  R+ + P SSR    SPS +  R  S S
Sbjct: 169 RRSRSASLRRSRSGSIKGSRYFQ-SPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGS 227

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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = -1

Query: 467 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ-LSAMLDEDPALM 291
           + SY  +V   +++++PKAV+H  V   K +L +     VG   K   L  +L E   + 
Sbjct: 606 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSEL---VGQLYKPALLDDLLTESEDMA 662

Query: 290 EKRDSLVKKLELYKSARNEIDSV 222
           ++R+     L+  + A   I  +
Sbjct: 663 QRRNEAADMLKALQKASQVIAEI 685

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>K0179_HUMAN (Q14684) Protein KIAA0179|
          Length = 758

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
 Frame = -3

Query: 432 EEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAA---ERDAGRGPRVDGEEGFPREEA 262
           EE  SE   A+P    +K+P +    A R+  E A    E  +  GP     +G      
Sbjct: 456 EESGSEHPPAVPMHNKRKRPRKKSPRAHREMLESAVLPPEDMSQSGPSGSHPQGPRGSPT 515

Query: 261 GAVQVRKERDRLGCMEMI*SDLMDCSW 181
           G  Q+ K + +LG + +  S L   +W
Sbjct: 516 GGAQLLKRKRKLGVVPVNGSGLSTPAW 542

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 215  SMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRSAAF 334
            S  P+ S S R   +P   RG P +PS+ GP PAS  ++F
Sbjct: 942  STPPAPSSSGRLTPSP---RGGPFNPSSGGPLPASSPSSF 978

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>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +2

Query: 239 SLRTCTAPASSRGNPSSPSTRGPRPASRSAAFSLCFLHAHRNG*AGFFLPP 391
           SLR  + P  +   PS P  R P PA R +              AGF LPP
Sbjct: 318 SLRLRSTPPPADQRPSPPPPRDPAPAVRCSVIQRAPQSQLPTSRAGFLLPP 368

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>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel|
           [Contains: Glutamic acid-rich protein (GARP);
           Cyclic-nucleotide-gated cation channel 4 (CNG channel 4)
           (CNG-4) (Cyclic nucleotide-gated cation channel
           modulatory subunit)]
          Length = 1394

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -3

Query: 432 EEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAAERDAGRGPRVDGEEGFPREEAGAV 253
           EE + E  R    E G+KK  +       K+ E+  E++   G   + EEG  +EE    
Sbjct: 383 EEKEEEEGREKEEEEGEKKEEE----GREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGG 438

Query: 252 QVRKERDR 229
           +  +E  R
Sbjct: 439 EKEEEEGR 446

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>PDX1_NEUCR (Q9C1K6) Probable pyridoxin biosynthesis protein pdx-1|
          Length = 308

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -3

Query: 471 ECIILHQHGLRYIEEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAAERDAGRGP-RV 295
           EC IL Q G+ YI+E +  +         K +   PF+C CR   E       G    R 
Sbjct: 95  ECRILEQLGVDYIDESEVLTPADDTYHVQKDQFKAPFVCGCRNLGEALRRIKEGAAMIRT 154

Query: 294 DGEEG 280
            GE G
Sbjct: 155 KGEAG 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,614,700
Number of Sequences: 219361
Number of extensions: 1981026
Number of successful extensions: 7556
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 6999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7483
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result