>gb|AY103770.1| Zea mays PCO100327 mRNA sequence
          Length = 1333

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                        
Query: 46   tagttggatgctcagttcaggatgccagatgctttgttggattcgacactgnctccgagg 105
            |||||||||| ||| |||||||||||| |||| |||| |||||| ||| || | | ||||
Sbjct: 1092 tagttggatgttcaattcaggatgccaaatgccttgtaggattcaacagtgtcacggagg 1033

                                                              
Query: 106  gtcttctctacnggcctgaaggtccaccctagcttctgaagtttctcaga 155
            |  | |||||  ||| ||||||||||||| |||||||| |||||||||||
Sbjct: 1032 gattcctctataggcttgaaggtccaccccagcttctgcagtttctcaga 983



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 tttttgggataagtgtatgttggatataaggtcttcagaatgttnatgacatcagaaact 249
           ||||||||||||| ||| |  ||||| | ||||||||| ||||| || | |||||||| |
Sbjct: 948 tttttgggataagggtaagacggatacatggtcttcagtatgtttatcatatcagaaatt 889

                 
Query: 250 tttatt 255
           ||||||
Sbjct: 888 tttatt 883

>dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093J18, full
           insert sequence
          Length = 1094

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 187 aagtttttgggataagtgtatgttggatataaggtcttcagaatgttnatgacatcagaa 246
           ||||||||||||||||| || ||||||||||||||||| | |||||| || | |||||| 
Sbjct: 864 aagtttttgggataagtataagttggatataaggtctttaaaatgtttatcatatcagag 805

                                                    
Query: 247 acttttattcgtactggactgcagatgtaccgtncagatgc 287
           ||| ||||| |  |||  ||||||||||| ||| | |||||
Sbjct: 804 actcttattggagctgagctgcagatgtatcgtccggatgc 764



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 64  aggatgccagatgctttgttggattcgacactgnctccgagggtcttctctacnggcctg 123
           ||||||||| ||||||||| |||||| || ||| | | |||||| | ||| |  ||||||
Sbjct: 987 aggatgccaaatgctttgtaggattccacgctgtcccggagggtttcctcaataggcctg 928

                                              
Query: 124 aaggtccaccctagcttctgaagtttctcagaact 158
           ||  |||| || |||||||||||||||||| ||||
Sbjct: 927 aaactccagccaagcttctgaagtttctcaaaact 893

>gb|BT017666.1| Zea mays clone EL01N0441F03.c mRNA sequence
          Length = 869

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 46  tagttggatgctcagttcaggatgccagatgctttgttggattcgacactgnctccgagg 105
           |||||||||| ||| |||||||||||| |||| |||| |||||| ||| || | | ||||
Sbjct: 612 tagttggatgttcaattcaggatgccaaatgccttgtaggattcaacagtggcacggagg 553

                                                             
Query: 106 gtcttctctacnggcctgaaggtccaccctagcttctgaagtttctcaga 155
           |  | |||||  ||  |||||| |||||| |||||||| |||||||||||
Sbjct: 552 gattcctctatagggttgaagggccaccccagcttctgcagtttctcaga 503



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 tttttgggataagtgtatgttggatataaggtcttcagaatgttnatgacatcagaaact 249
           ||||||||||||| ||| |  ||||| | ||||||||| ||||| || | |||||||| |
Sbjct: 468 tttttgggataagggtaagacggatacatggtcttcagtatgtttatcatatcagaaatt 409

                 
Query: 250 tttatt 255
           ||||||
Sbjct: 408 tttatt 403

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                            
Query: 190      tttttgggataagtgtatgttggatataaggtcttcagaatgttnatgacatcagaaact 249
                |||||||||||||| || ||||||||||||||||| | |||||| || | |||||| |||
Sbjct: 24690622 tttttgggataagtataagttggatataaggtctttaaaatgtttatcatatcagagact 24690681

                                                      
Query: 250      tttattcgtactggactgcagatgtaccgtncagatgc 287
                 ||||| |  |||  ||||||||||| ||| | |||||
Sbjct: 24690682 cttattggagctgagctgcagatgtatcgtccggatgc 24690719



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                            
Query: 64       aggatgccagatgctttgttggattcgacactgnctccgagggtcttctctacnggcctg 123
                ||||||||| ||||||||| |||||| || ||| | | |||||| | ||| |  ||||||
Sbjct: 24690122 aggatgccaaatgctttgtaggattccacgctgtcccggagggtttcctcaataggcctg 24690181

                                                   
Query: 124      aaggtccaccctagcttctgaagtttctcagaact 158
                ||  |||| || |||||||||||||||||| ||||
Sbjct: 24690182 aaactccagccaagcttctgaagtttctcaaaact 24690216

>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0029G06
          Length = 169711

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                         
Query: 190   tttttgggataagtgtatgttggatataaggtcttcagaatgttnatgacatcagaaact 249
             |||||||||||||| || ||||||||||||||||| | |||||| || | |||||| |||
Sbjct: 24303 tttttgggataagtataagttggatataaggtctttaaaatgtttatcatatcagagact 24362

                                                   
Query: 250   tttattcgtactggactgcagatgtaccgtncagatgc 287
              ||||| |  |||  ||||||||||| ||| | |||||
Sbjct: 24363 cttattggagctgagctgcagatgtatcgtccggatgc 24400



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                         
Query: 64    aggatgccagatgctttgttggattcgacactgnctccgagggtcttctctacnggcctg 123
             ||||||||| ||||||||| |||||| || ||| | | |||||| | ||| |  ||||||
Sbjct: 23803 aggatgccaaatgctttgtaggattccacgctgtcccggagggtttcctcaataggcctg 23862

                                                
Query: 124   aaggtccaccctagcttctgaagtttctcagaact 158
             ||  |||| || |||||||||||||||||| ||||
Sbjct: 23863 aaactccagccaagcttctgaagtttctcaaaact 23897

>gb|BT018028.1| Zea mays clone EL01N0529H05.c mRNA sequence
          Length = 1336

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 86/106 (81%)
 Strand = Plus / Minus

                                                                        
Query: 50   tggatgctcagttcaggatgccagatgctttgttggattcgacactgnctccgagggtct 109
            |||||| ||| |||||||||||| |||||||||   |||| ||| || | | |||||  |
Sbjct: 1017 tggatgttcaattcaggatgccaaatgctttgtacaattcaacagtgtcgcggagggatt 958

                                                          
Query: 110  tctctacnggcctgaaggtccaccctagcttctgaagtttctcaga 155
             |||||  ||| ||||| ||||||| |||||||| |||||||||||
Sbjct: 957  cctctataggcttgaagctccaccccagcttctgcagtttctcaga 912



 Score = 48.1 bits (24), Expect = 0.016
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 190 tttttgggataagtgtatgttggatataaggtcttcagaatgtt 233
           ||||||||||||| ||| | |||||| ||||||||||| |||||
Sbjct: 877 tttttgggataagggtaagatggatacaaggtcttcagtatgtt 834

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 118     ggcctgaaggtccaccctagcttctgaagtttctcagaact 158
               |||||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 4891701 ggcctgaaggtccaacctagcttctcaagcttctctgaact 4891741

>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 118   ggcctgaaggtccaccctagcttctgaagtttctcagaact 158
             |||||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 50955 ggcctgaaggtccaacctagcttctcaagcttctctgaact 50995

>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 118   ggcctgaaggtccaccctagcttctgaagtttctcagaact 158
             |||||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 96495 ggcctgaaggtccaacctagcttctcaagcttctctgaact 96535

>gb|AY111471.1| Zea mays CL42025_1 mRNA sequence
          Length = 830

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 199 taagtgtatgttggatataaggtcttcagaatgtt 233
           ||||||||||||||||||  ||||||||| |||||
Sbjct: 349 taagtgtatgttggatattcggtcttcagtatgtt 383

>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17,
              complete sequence
          Length = 141598

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 189    gtttttgggataagtgtatgttgga 213
              ||||||||||||||||||| |||||
Sbjct: 103824 gtttttgggataagtgtattttgga 103800

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 189      gtttttgggataagtgtatgttgga 213
                ||||||||||||||||||| |||||
Sbjct: 16463387 gtttttgggataagtgtattttgga 16463363

>gb|AC011235.4| Homo sapiens BAC clone RP11-295A19 from 2, complete sequence
          Length = 184042

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 139    ttctgaagtttctcagaactc 159
              |||||||||||||||||||||
Sbjct: 162359 ttctgaagtttctcagaactc 162379

>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    ttttgggataagtgtatgtt 210
              ||||||||||||||||||||
Sbjct: 121959 ttttgggataagtgtatgtt 121940

>ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative polyprotein
           (OSJNBa0006I13.8), mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 taactttaccttcttccacc 180
           ||||||||||||||||||||
Sbjct: 463 taactttaccttcttccacc 444

>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete
             sequence
          Length = 148248

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   ataactttaccttcttccacctcc 183
             ||||||||||||| ||||||||||
Sbjct: 26454 ataactttacctttttccacctcc 26431

>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete
              sequence
          Length = 190939

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    ataactttaccttcttccacctcc 183
              ||||||||||||| ||||||||||
Sbjct: 170630 ataactttacctttttccacctcc 170607

>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    ttttgggataagtgtatgtt 210
              ||||||||||||||||||||
Sbjct: 139393 ttttgggataagtgtatgtt 139374

>gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, complete sequence
          Length = 197483

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    ttctgaagtttctcagaact 158
              ||||||||||||||||||||
Sbjct: 143657 ttctgaagtttctcagaact 143638

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 161      taactttaccttcttccacc 180
                ||||||||||||||||||||
Sbjct: 14219468 taactttaccttcttccacc 14219449

>gb|AC093381.5| Homo sapiens BAC clone RP11-436J10 from 2, complete sequence
          Length = 121777

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   tatgttggatataaggtctt 224
             ||||||||||||||||||||
Sbjct: 44536 tatgttggatataaggtctt 44517

>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   taactttaccttcttccacc 180
             ||||||||||||||||||||
Sbjct: 91541 taactttaccttcttccacc 91522

>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence
          Length = 118313

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   ataactttaccttcttccacctcc 183
             ||||||||||||| ||||||||||
Sbjct: 83728 ataactttacctttttccacctcc 83705

>dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C18, full
           insert sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 taactttaccttcttccacc 180
           ||||||||||||||||||||
Sbjct: 544 taactttaccttcttccacc 525

>dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H09, full
           insert sequence
          Length = 1355

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 taactttaccttcttccacc 180
           ||||||||||||||||||||
Sbjct: 559 taactttaccttcttccacc 540

>gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B sequence
          Length = 110434

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   ttctgaagtttctcagaact 158
             ||||||||||||||||||||
Sbjct: 48173 ttctgaagtttctcagaact 48192

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 161      taactttaccttcttccacc 180
                ||||||||||||||||||||
Sbjct: 14227710 taactttaccttcttccacc 14227691


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,937,963
Number of Sequences: 3902068
Number of extensions: 1937963
Number of successful extensions: 38261
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38179
Number of HSP's gapped (non-prelim): 80
length of query: 292
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 270
effective length of database: 17,147,199,772
effective search space: 4629743938440
effective search space used: 4629743938440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)