ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17k08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK101789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
2dbj|AK060466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3gb|AY107163.1| Zea mays PCO109318 mRNA sequence 375 e-100
4gb|BT017023.1| Zea mays clone EK07D2312C08.c mRNA sequence 236 7e-59
5gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 119 1e-23
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 119 1e-23
8gb|AF165425.5| Homo sapiens chromosome 8 clone GS1-110c1 map q11... 44 0.57
9gb|AC103958.11| Homo sapiens chromosome 8, clone GS1-110C1, comp... 44 0.57
10gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complet... 42 2.3
11gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gen... 40 9.0
12gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genom... 40 9.0
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.0
14gb|AF398650.1| Lachnophorus elegantulus 28S large subunit riboso... 40 9.0
15emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on ch... 40 9.0
16gb|AC130276.2| Homo sapiens chromosome 3 clone RP11-1076P5, comp... 40 9.0
17ref|NM_164677.1| Drosophila melanogaster slowmo CG9131-RA, trans... 40 9.0
18gb|AC022029.7| Homo sapiens chromosome 10 clone RP11-93L14, comp... 40 9.0
19ref|NM_079966.2| Drosophila melanogaster slowmo CG9131-RB, trans... 40 9.0
20gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, comp... 40 9.0
21gb|AY051484.1| Drosophila melanogaster GH14384 full length cDNA 40 9.0
22gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 40 9.0
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
25dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
26gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 40 9.0
27gb|U37214.1|SIU37214 Simian immunodeficiency virus isolate G023 ... 40 9.0
28gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s... 40 9.0

>dbj|AK101789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065I20, full
            insert sequence
          Length = 1878

 Score =  391 bits (197), Expect = e-105
 Identities = 351/401 (87%), Gaps = 1/401 (0%)
 Strand = Plus / Minus

                                                                        
Query: 257  cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
            ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 1681 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 1622

                                                                        
Query: 317  tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
            || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 1621 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 1562

                                                                        
Query: 377  tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 436
            ||  ||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 1561 tccctggtgagcccaccagtttcagcctcctcagtactcgccatcaaagggtagacacct 1502

                                                                        
Query: 437  ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 496
            ||  ||| |||||||||||| ||||| |||||||| |||||||||||||||| |||||||
Sbjct: 1501 cttgcagcaaaacattgccttgcctgagttgtgccgtaagaacgccactttgttggatca 1442

                                                                        
Query: 497  gagccctcgcgtgggaacacaactgctaaaactggcattggtggcctgtatttagcaact 556
            |||||||| |||||||| ||||| || || ||||||||||||||| |||| || ||||||
Sbjct: 1441 gagccctcacgtgggaagacaacggccaacactggcattggtggcttgtacttggcaact 1382

                                                                        
Query: 557  aacctggcagctctccctgaggaaggtgaacacaacaatcgcagcagcttttactttcat 616
            |||||||||||||| ||||| ||| ||||||||||| || |||||||||||||| |||||
Sbjct: 1381 aacctggcagctcttcctga-gaaagtgaacacaacgattgcagcagcttttaccttcat 1323

                                                     
Query: 617  tgcagaacgaaccgctgatgatgccacagattcttcatggg 657
            |||||  ||||||||||| ||||||||||||||||||||||
Sbjct: 1322 tgcagtgcgaaccgctgaagatgccacagattcttcatggg 1282



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>dbj|AK060466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C12, full
            insert sequence
          Length = 1723

 Score =  391 bits (197), Expect = e-105
 Identities = 351/401 (87%), Gaps = 1/401 (0%)
 Strand = Plus / Minus

                                                                        
Query: 257  cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
            ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 1432 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 1373

                                                                        
Query: 317  tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
            || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 1372 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 1313

                                                                        
Query: 377  tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 436
            ||  ||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 1312 tccctggtgagcccaccagtttcagcctcctcagtactcgccatcaaagggtagacacct 1253

                                                                        
Query: 437  ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 496
            ||  ||| |||||||||||| ||||| |||||||| |||||||||||||||| |||||||
Sbjct: 1252 cttgcagcaaaacattgccttgcctgagttgtgccgtaagaacgccactttgttggatca 1193

                                                                        
Query: 497  gagccctcgcgtgggaacacaactgctaaaactggcattggtggcctgtatttagcaact 556
            |||||||| |||||||| ||||| || || ||||||||||||||| |||| || ||||||
Sbjct: 1192 gagccctcacgtgggaagacaacggccaacactggcattggtggcttgtacttggcaact 1133

                                                                        
Query: 557  aacctggcagctctccctgaggaaggtgaacacaacaatcgcagcagcttttactttcat 616
            |||||||||||||| ||||| ||| ||||||||||| || |||||||||||||| |||||
Sbjct: 1132 aacctggcagctcttcctga-gaaagtgaacacaacgattgcagcagcttttaccttcat 1074

                                                     
Query: 617  tgcagaacgaaccgctgatgatgccacagattcttcatggg 657
            |||||  ||||||||||| ||||||||||||||||||||||
Sbjct: 1073 tgcagtgcgaaccgctgaagatgccacagattcttcatggg 1033



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>gb|AY107163.1| Zea mays PCO109318 mRNA sequence
          Length = 1040

 Score =  375 bits (189), Expect = e-100
 Identities = 343/393 (87%), Gaps = 1/393 (0%)
 Strand = Plus / Minus

                                                                       
Query: 257 cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
           ||||| |||||||||||||||||||||||||| ||||||||||| || |||| |||||||
Sbjct: 744 cactcaatgatcttgacaacagaagaatcaccaatcttttcaaagattatcaacctgtcg 685

                                                                       
Query: 317 tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
            | ||||| | |||||| || ||||| |||||| | |  |||||||||||||| ||  ||
Sbjct: 684 aaaggcttcactatgccaaccgaccgaccatagctcatcgcaagttttatcccatactct 625

                                                                       
Query: 377 tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 436
           || || || |||||||| ||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 624 tcctttgttagcccaccagtttcggcctcatcagtactccccatcaaagggtacacgcct 565

                                                                       
Query: 437 ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 496
           ||||| |  |||||||| || ||||| |||||||||||||||||||||||||||||||| 
Sbjct: 564 ctcactgcgaaacattgtcttgcctgtgttgtgccataagaacgccactttgatggatcg 505

                                                                       
Query: 497 gagccctcgcgtgggaacacaactgctaaaactggcattggtggcctgtatttagcaact 556
           || || || |||||||| | ||||||||||| |||||||| |||||| || || ||||||
Sbjct: 504 gatccttcacgtgggaagataactgctaaaattggcattgttggcctatacttggcaact 445

                                                                       
Query: 557 aacctggcagctctccctgaggaaggtgaacacaacaatcgcagcagcttttactttcat 616
           ||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 444 aacctcgcagctctccctga-gaatgtgaacacaacaatggcagcagcttttactttgat 386

                                            
Query: 617 tgcagaacgaaccgctgatgatgccacagattc 649
           |||||||| |||||||| |||||||||||||||
Sbjct: 385 tgcagaaccaaccgctgctgatgccacagattc 353



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>gb|BT017023.1| Zea mays clone EK07D2312C08.c mRNA sequence
          Length = 540

 Score =  236 bits (119), Expect = 7e-59
 Identities = 233/271 (85%)
 Strand = Plus / Minus

                                                                       
Query: 257 cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
           ||||| |||||||||||||||||||||||||| ||||||||||| || |||| |||||||
Sbjct: 282 cactcaatgatcttgacaacagaagaatcaccaatcttttcaaagattatcaacctgtcg 223

                                                                       
Query: 317 tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
            | ||||| | |||||| || ||||| |||||| | |  |||||||||||||| ||  ||
Sbjct: 222 aaaggcttcactatgccaaccgaccgaccatagctcatcgcaagttttatcccatactct 163

                                                                       
Query: 377 tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 436
           || || || |||||||| ||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 162 tcctttgttagcccaccagtttcggcctcatcagtactccccatcaaagggtacacgcct 103

                                                                       
Query: 437 ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 496
           ||||| |  |||||||| || ||||| |||||||||||||||||||||||||||||||| 
Sbjct: 102 ctcactgcgaaacattgtcttgcctgtgttgtgccataagaacgccactttgatggatcg 43

                                          
Query: 497 gagccctcgcgtgggaacacaactgctaaaa 527
           || || || |||||||| | |||||||||||
Sbjct: 42  gatccttcacgtgggaagataactgctaaaa 12



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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctgcgttgtgccataagaacgccactttgatggatcagagccctcgcgtgggaacacaa 518
             |||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 42887 cctgagttgtgccgtaagaacgccactttgttggatcagagccctcacgtgggaagacaa 42828

                                                         
Query: 519   ctgctaaaactggcattggtggcctgtatttagcaactaacctg 562
             | || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 42827 cggccaacactggcattggtggcttgtacttggcaactaacctg 42784



 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                         
Query: 257   cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
             ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 43407 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 43348

                                                                         
Query: 317   tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
             || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 43347 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 43288

                                         
Query: 377   tctttggtgagcccaccggtttcagcct 404
             ||  ||||||||||||| ||||||||||
Sbjct: 43287 tccctggtgagcccaccagtttcagcct 43260



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 58/64 (90%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 558   acctggcagctctccctgaggaaggtgaacacaacaatcgcagcagcttttactttcatt 617
             ||||||||||||| |||||| ||| |||||||||| || |||||||||||||| ||||||
Sbjct: 42713 acctggcagctcttcctgagaaag-tgaacacaacgattgcagcagcttttaccttcatt 42655

                 
Query: 618   gcag 621
             ||||
Sbjct: 42654 gcag 42651



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 402   cctcgtcagtactccccatcaaagggtacacacctctcacagaaaaacattgcctcgcct 461
             |||| ||||||||| ||||||||||||| ||||||||  ||| |||||||||||| ||||
Sbjct: 43050 cctcctcagtactcgccatcaaagggtagacacctcttgcagcaaaacattgccttgcct 42991

              
Query: 462   g 462
             |
Sbjct: 42990 g 42990



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 627   accgctgatgatgccacagattcttcatggg 657
             |||||||| ||||||||||||||||||||||
Sbjct: 42564 accgctgaagatgccacagattcttcatggg 42534



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                           
Query: 459     cctgcgttgtgccataagaacgccactttgatggatcagagccctcgcgtgggaacacaa 518
               |||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 5986804 cctgagttgtgccgtaagaacgccactttgttggatcagagccctcacgtgggaagacaa 5986745

                                                           
Query: 519     ctgctaaaactggcattggtggcctgtatttagcaactaacctg 562
               | || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 5986744 cggccaacactggcattggtggcttgtacttggcaactaacctg 5986701



 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                           
Query: 257     cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
               ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 5987324 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 5987265

                                                                           
Query: 317     tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
               || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 5987264 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 5987205

                                           
Query: 377     tctttggtgagcccaccggtttcagcct 404
               ||  ||||||||||||| ||||||||||
Sbjct: 5987204 tccctggtgagcccaccagtttcagcct 5987177



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 58/64 (90%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                           
Query: 558     acctggcagctctccctgaggaaggtgaacacaacaatcgcagcagcttttactttcatt 617
               ||||||||||||| |||||| ||| |||||||||| || |||||||||||||| ||||||
Sbjct: 5986630 acctggcagctcttcctgagaaag-tgaacacaacgattgcagcagcttttaccttcatt 5986572

                   
Query: 618     gcag 621
               ||||
Sbjct: 5986571 gcag 5986568



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                           
Query: 402     cctcgtcagtactccccatcaaagggtacacacctctcacagaaaaacattgcctcgcct 461
               |||| ||||||||| ||||||||||||| ||||||||  ||| |||||||||||| ||||
Sbjct: 5986967 cctcctcagtactcgccatcaaagggtagacacctcttgcagcaaaacattgccttgcct 5986908

                
Query: 462     g 462
               |
Sbjct: 5986907 g 5986907



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 627     accgctgatgatgccacagattcttcatggg 657
               |||||||| ||||||||||||||||||||||
Sbjct: 5986481 accgctgaagatgccacagattcttcatggg 5986451



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                           
Query: 459     cctgcgttgtgccataagaacgccactttgatggatcagagccctcgcgtgggaacacaa 518
               |||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 6053281 cctgagttgtgccgtaagaacgccactttgttggatcagagccctcacgtgggaagacaa 6053222

                                                           
Query: 519     ctgctaaaactggcattggtggcctgtatttagcaactaacctg 562
               | || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 6053221 cggccaacactggcattggtggcttgtacttggcaactaacctg 6053178



 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                           
Query: 257     cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 316
               ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 6053801 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 6053742

                                                                           
Query: 317     tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 376
               || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 6053741 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 6053682

                                           
Query: 377     tctttggtgagcccaccggtttcagcct 404
               ||  ||||||||||||| ||||||||||
Sbjct: 6053681 tccctggtgagcccaccagtttcagcct 6053654



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 58/64 (90%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                           
Query: 558     acctggcagctctccctgaggaaggtgaacacaacaatcgcagcagcttttactttcatt 617
               ||||||||||||| |||||| ||| |||||||||| || |||||||||||||| ||||||
Sbjct: 6053107 acctggcagctcttcctgagaaag-tgaacacaacgattgcagcagcttttaccttcatt 6053049

                   
Query: 618     gcag 621
               ||||
Sbjct: 6053048 gcag 6053045



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                           
Query: 402     cctcgtcagtactccccatcaaagggtacacacctctcacagaaaaacattgcctcgcct 461
               |||| ||||||||| ||||||||||||| ||||||||  ||| |||||||||||| ||||
Sbjct: 6053444 cctcctcagtactcgccatcaaagggtagacacctcttgcagcaaaacattgccttgcct 6053385

                
Query: 462     g 462
               |
Sbjct: 6053384 g 6053384



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 627     accgctgatgatgccacagattcttcatggg 657
               |||||||| ||||||||||||||||||||||
Sbjct: 6052958 accgctgaagatgccacagattcttcatggg 6052928



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>gb|AF165425.5| Homo sapiens chromosome 8 clone GS1-110c1 map q11.21, complete sequence
          Length = 108065

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 53    tctgagaagttctcttcacctt 74
             ||||||||||||||||||||||
Sbjct: 44087 tctgagaagttctcttcacctt 44066



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>gb|AC103958.11| Homo sapiens chromosome 8, clone GS1-110C1, complete sequence
          Length = 107642

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 53    tctgagaagttctcttcacctt 74
             ||||||||||||||||||||||
Sbjct: 44086 tctgagaagttctcttcacctt 44065



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>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence
          Length = 161723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 597    gcagcagcttttactttcatt 617
              |||||||||||||||||||||
Sbjct: 119785 gcagcagcttttactttcatt 119765



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>gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gene, partial cds; cfos gene,
             complete cds; and unknown gene
          Length = 202267

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   gtgtagttgagactgttgcctgag 227
             |||||||||||||||||| |||||
Sbjct: 59415 gtgtagttgagactgttgtctgag 59392



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>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
              sequence
          Length = 166888

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    tttcaaaaataatcaccctg 313
              ||||||||||||||||||||
Sbjct: 139314 tttcaaaaataatcaccctg 139333



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 294      tttcaaaaataatcaccctg 313
                ||||||||||||||||||||
Sbjct: 33525766 tttcaaaaataatcaccctg 33525747



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>gb|AF398650.1| Lachnophorus elegantulus 28S large subunit ribosomal RNA gene,
           partial sequence
          Length = 1081

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  gtatatatataaacctaaag 107
           ||||||||||||||||||||
Sbjct: 168 gtatatatataaacctaaag 149



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>emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 50886

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 516   caactgctaaaactggcatt 535
             ||||||||||||||||||||
Sbjct: 36678 caactgctaaaactggcatt 36697



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>gb|AC130276.2| Homo sapiens chromosome 3 clone RP11-1076P5, complete sequence
          Length = 74595

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    caacaagtatatatataaac 101
             ||||||||||||||||||||
Sbjct: 14622 caacaagtatatatataaac 14641



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>ref|NM_164677.1| Drosophila melanogaster slowmo CG9131-RA, transcript variant A
            (slmo), mRNA
          Length = 1288

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   tatatatataaacctaaagt 108
            ||||||||||||||||||||
Sbjct: 1190 tatatatataaacctaaagt 1209



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>gb|AC022029.7| Homo sapiens chromosome 10 clone RP11-93L14, complete sequence
          Length = 140040

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ccaaagtgctaaacaggaca 129
              ||||||||||||||||||||
Sbjct: 111413 ccaaagtgctaaacaggaca 111432



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>ref|NM_079966.2| Drosophila melanogaster slowmo CG9131-RB, transcript variant B
            (slmo), mRNA
          Length = 1169

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   tatatatataaacctaaagt 108
            ||||||||||||||||||||
Sbjct: 1071 tatatatataaacctaaagt 1090



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>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    atcttttcaaaaataatcac 309
              ||||||||||||||||||||
Sbjct: 130443 atcttttcaaaaataatcac 130462



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>gb|AY051484.1| Drosophila melanogaster GH14384 full length cDNA
          Length = 1261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   tatatatataaacctaaagt 108
            ||||||||||||||||||||
Sbjct: 1143 tatatatataaacctaaagt 1162



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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
              BACR10M11, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     tatatatataaacctaaagt 108
              ||||||||||||||||||||
Sbjct: 103665 tatatatataaacctaaagt 103684



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 294      tttcaaaaataatcaccctg 313
                ||||||||||||||||||||
Sbjct: 33616238 tttcaaaaataatcaccctg 33616219



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 174      ggagaacaaaaggaggaggg 193
                ||||||||||||||||||||
Sbjct: 26884406 ggagaacaaaaggaggaggg 26884387



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>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1001_D02
          Length = 129081

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   ggagaacaaaaggaggaggg 193
             ||||||||||||||||||||
Sbjct: 62949 ggagaacaaaaggaggaggg 62930



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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
             sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    tatatatataaacctaaagt 108
             ||||||||||||||||||||
Sbjct: 90414 tatatatataaacctaaagt 90395



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>gb|U37214.1|SIU37214 Simian immunodeficiency virus isolate G023 tat, rev, and envelope
           glycoprotein (env) genes, partial cds
          Length = 444

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 375 cttctttggtgagcccaccg 394
           ||||||||||||||||||||
Sbjct: 301 cttctttggtgagcccaccg 282



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>gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s DS06106 (D123), DS05973
             (D122), and DS08584 (D118)), complete sequence
          Length = 174311

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tatatatataaacctaaagt 108
             ||||||||||||||||||||
Sbjct: 43377 tatatatataaacctaaagt 43396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,817,469
Number of Sequences: 3902068
Number of extensions: 6817469
Number of successful extensions: 130858
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130503
Number of HSP's gapped (non-prelim): 349
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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