| Clone Name | rbags17k07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RM02_CANGA (Q6FS31) 60S ribosomal protein L2, mitochondrial prec... | 29 | 3.9 |
|---|
>RM02_CANGA (Q6FS31) 60S ribosomal protein L2, mitochondrial precursor| Length = 368 Score = 28.9 bits (63), Expect = 3.9 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 13 ALKDRACQAL-PQYQRGPPLH*YTKPQSTVLRSSXTRXYAHENANTXRHHSSYNVPP 180 ++KD A + L P+ G + KP ++R T+ Y EN R H+ Y V P Sbjct: 31 SMKDSAGRRLGPKKYEGQDV----KPGEIIMRQRGTKFYPGENVKIGRDHTIYAVEP 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,646,085 Number of Sequences: 219361 Number of extensions: 285482 Number of successful extensions: 539 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 531 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 539 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)