ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17k05 |
|---|---|
| Clone Library Name | barley_pub |
>VATB1_HORVU (Q40078) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)| (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) Length = 488 Score = 115 bits (287), Expect = 1e-25 Identities = 55/55 (100%), Positives = 55/55 (100%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH Sbjct: 434 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 488
>VATB2_HORVU (Q40079) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)| (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) Length = 483 Score = 111 bits (278), Expect = 1e-24 Identities = 53/55 (96%), Positives = 53/55 (96%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLD FYSRDA H Sbjct: 429 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDATH 483
>VATB2_GOSHI (Q43433) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)| (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) (Fragment) Length = 386 Score = 107 bits (268), Expect = 2e-23 Identities = 51/55 (92%), Positives = 53/55 (96%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 DKFERKFV QGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLD +YSRDAA+ Sbjct: 332 DKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAAN 386
>VATB_ARATH (P11574) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 486 Score = 105 bits (262), Expect = 8e-23 Identities = 50/53 (94%), Positives = 51/53 (96%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDA 366 DKFERKFV QGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLD FYSRD+ Sbjct: 432 DKFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDS 484
>VATB1_GOSHI (Q43432) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)| (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) Length = 488 Score = 100 bits (250), Expect = 2e-21 Identities = 48/55 (87%), Positives = 50/55 (90%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 DKFERK V QGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKT D +YSRDA + Sbjct: 434 DKFERKVVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTHDQYYSRDAGN 488
>VATB_SCHPO (P31411) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 503 Score = 80.5 bits (197), Expect = 3e-15 Identities = 35/54 (64%), Positives = 46/54 (85%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 KFE+ F++QGAY+ R IF++LDLAW+LLRIFPRE+L RIP K LD +YSR +A+ Sbjct: 435 KFEKTFISQGAYENRTIFETLDLAWSLLRIFPREMLTRIPKKILDQYYSRSSAY 488
>VATB_NEUCR (P11593) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 513 Score = 80.1 bits (196), Expect = 3e-15 Identities = 35/54 (64%), Positives = 46/54 (85%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 DKFER F+AQG Y++R IF+SLDLAW+LLRI+ +++L+RIP K +D FYSR AA Sbjct: 431 DKFERSFIAQGPYESRTIFESLDLAWSLLRIYRKDMLNRIPKKIIDEFYSRSAA 484
>VATB2_ACEAT (Q38680) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)| (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) Length = 492 Score = 79.0 bits (193), Expect = 8e-15 Identities = 37/51 (72%), Positives = 41/51 (80%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 DKFERKFV QG Y+ R IF SLDLAWTLLR+FP+ELL RI AKTL+ Y R Sbjct: 439 DKFERKFVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489
>VATB1_ACEAT (Q38681) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)| (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) Length = 492 Score = 79.0 bits (193), Expect = 8e-15 Identities = 37/51 (72%), Positives = 41/51 (80%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 DKFERKFV QG Y+ R IF SLDLAWTLLR+FP+ELL RI AKTL+ Y R Sbjct: 439 DKFERKFVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489
>VATB_CANTR (P22550) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 511 Score = 76.3 bits (186), Expect = 5e-14 Identities = 32/52 (61%), Positives = 44/52 (84%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRD 369 +KFE+ F++QGAY+ R IF+SLDLAW+LLRI+P+E+L+RI K L+ FY RD Sbjct: 437 EKFEKNFISQGAYENRTIFESLDLAWSLLRIYPKEMLNRISPKILEEFYGRD 488
>VATB2_PONPY (Q5R5V5) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) Length = 511 Score = 75.9 bits (185), Expect = 6e-14 Identities = 32/53 (60%), Positives = 41/53 (77%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFER F+AQG Y+ R +F++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 457 KFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509
>VATB2_HUMAN (P21281) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) (HO57) Length = 511 Score = 75.9 bits (185), Expect = 6e-14 Identities = 32/53 (60%), Positives = 41/53 (77%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFER F+AQG Y+ R +F++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 457 KFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509
>VATB2_BOVIN (P31408) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 74.7 bits (182), Expect = 1e-13 Identities = 31/53 (58%), Positives = 41/53 (77%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFER F+AQG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 457 KFERNFIAQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509
>VATB_HELVI (P31410) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 74.3 bits (181), Expect = 2e-13 Identities = 31/54 (57%), Positives = 41/54 (75%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 KFE+ F++QG Y+ R +F+SLD+ W LLRIFP+E+L RIPA L FY RD+ H Sbjct: 441 KFEKNFISQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDSRH 494
>VATB_DROME (P31409) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 490 Score = 74.3 bits (181), Expect = 2e-13 Identities = 31/54 (57%), Positives = 41/54 (75%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 KFE+ F++QG Y+ R +F+SLD+ W LLRIFP+E+L RIPA L FY RD+ H Sbjct: 437 KFEKNFISQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDSRH 490
>VATB_MANSE (P31401) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 73.9 bits (180), Expect = 2e-13 Identities = 31/54 (57%), Positives = 40/54 (74%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 KFE+ F+ QG Y+ R +F+SLD+ W LLRIFP+E+L RIPA L FY RD+ H Sbjct: 441 KFEKNFITQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDSRH 494
>VATB2_RAT (P62815) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 72.0 bits (175), Expect = 9e-13 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFE+ F+ QG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 457 KFEKNFITQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509
>VATB2_MOUSE (P62814) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 72.0 bits (175), Expect = 9e-13 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFE+ F+ QG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 457 KFEKNFITQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509
>VATB1_HUMAN (P15313) Vacuolar ATP synthase subunit B, kidney isoform (EC| 3.6.3.14) (V-ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit) Length = 513 Score = 72.0 bits (175), Expect = 9e-13 Identities = 30/51 (58%), Positives = 41/51 (80%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRD 369 KFE+ F+ QG Y+ R++F+SLDL+W LLRIFP+E+L RIP +D FYSR+ Sbjct: 451 KFEKNFINQGPYENRSMFESLDLSWKLLRIFPKEMLKRIPQAVIDEFYSRE 501
>VATB1_BOVIN (P31407) Vacuolar ATP synthase subunit B, kidney isoform (EC| 3.6.3.14) (V-ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit) Length = 513 Score = 72.0 bits (175), Expect = 9e-13 Identities = 30/53 (56%), Positives = 41/53 (77%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFE+KF+ QG Y+ R++F+SLDL W LLR FP+E+L RIP +D F+SR+ A Sbjct: 451 KFEKKFINQGPYEKRSVFESLDLGWKLLRTFPKEMLKRIPQNIIDEFFSREGA 503
>VATB_CAEEL (Q19626) Probable vacuolar ATP synthase subunit B (EC 3.6.3.14)| (V-ATPase B subunit) (Vacuolar proton pump B subunit) Length = 491 Score = 72.0 bits (175), Expect = 9e-13 Identities = 30/53 (56%), Positives = 40/53 (75%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 KFE+ F+ QG Y+ R++F+SLD+ W LLRIFPRE+L RIP TL+ +Y R A Sbjct: 437 KFEKNFITQGHYENRSVFESLDIGWQLLRIFPREMLKRIPESTLEKYYPRGGA 489
>VATB_YEAST (P16140) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 517 Score = 71.6 bits (174), Expect = 1e-12 Identities = 30/51 (58%), Positives = 41/51 (80%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 +KFE+ F+ QGAY+ R +F+SLD AW+LLRI+P+E+L+RI K LD FY R Sbjct: 437 EKFEKTFITQGAYEDRTVFESLDQAWSLLRIYPKEMLNRISPKILDEFYDR 487
>VATB_CYACA (P48413) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 500 Score = 71.2 bits (173), Expect = 2e-12 Identities = 32/51 (62%), Positives = 40/51 (78%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 DKFER+FV QGAY+ R+I+ SLD+AW LLRIFP ++L RIP K L +Y R Sbjct: 434 DKFERRFVNQGAYERRDIYTSLDMAWDLLRIFPVQMLRRIPEKILQEYYHR 484
>VATB_CHICK (P49712) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 453 Score = 70.9 bits (172), Expect = 2e-12 Identities = 29/52 (55%), Positives = 40/52 (76%) Frame = -1 Query: 521 KFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDA 366 KFE+ F+AQG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+ Sbjct: 398 KFEKNFIAQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQTTLAEFYPRDS 449
>VATB_TRYCO (Q26976) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 485 Score = 66.6 bits (161), Expect = 4e-11 Identities = 28/49 (57%), Positives = 40/49 (81%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 +KFE+KF+ QG +++R++FQSLDL W LLRIFP+ LL++I KT + FY Sbjct: 430 EKFEKKFICQGFHESRDVFQSLDLCWQLLRIFPKVLLNKIDVKTRNEFY 478
>VATB_PLAFA (Q25691) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 64.3 bits (155), Expect = 2e-10 Identities = 27/55 (49%), Positives = 39/55 (70%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 360 DKFE++F+ Q Y+ R+I+QSLD+AW LLRIFP ++L +I L +Y R A+ Sbjct: 440 DKFEKRFITQNTYECRDIYQSLDIAWELLRIFPEDMLKKIKTDILSKYYPRHHAN 494
>VATB_PYRHO (O57729) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 50.1 bits (118), Expect = 4e-06 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + ++ + Sbjct: 409 DRFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
>VATB_PYRAB (Q9UXU8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 50.1 bits (118), Expect = 4e-06 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D+FER+FVAQG Y+ R+I ++LDL W LL I P L R+ + + ++ + Sbjct: 409 DRFEREFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459
>VATB_ARCFU (O29100) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 470 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/51 (39%), Positives = 33/51 (64%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D+FER+FV QG Y+ R+I +LDL W LL + P L ++ K ++ ++ + Sbjct: 404 DEFERRFVQQGRYEDRDIEYTLDLGWELLAMLPERELTKVERKFIEKYHPK 454
>VATB_HALSA (Q9HNE4) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 47.0 bits (110), Expect = 3e-05 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 363 D+FE +F+ QG R+I ++LDL W LL +FP+ L+R+ ++ Y D A Sbjct: 412 DRFEAEFIDQGFKTNRDIEETLDLGWELLSMFPKTELNRVDEDLIEDHYVEDVA 465
>VATB_METJA (Q57669) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 46.6 bits (109), Expect = 4e-05 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D+FE KFV QG + R+I ++LDL W LL I P E L R+ + ++ ++ + Sbjct: 411 DEFEDKFVRQGKDEDRSIEETLDLLWELLAILPEEELKRVDRELIEKYHPK 461
>VATB_STRP8 (Q8P2U5) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 381 ++FE +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 408 NRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB_STRP6 (Q5XE49) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 381 ++FE +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 408 NRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB_STRP3 (Q7CFI7) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 381 ++FE +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 408 NRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB_STRP1 (Q9A1Q2) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 381 ++FE +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 408 NRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB2_TREPA (O83540) V-type ATP synthase beta chain 2 (EC 3.6.3.14) (V-type| ATPase subunit B 2) Length = 480 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/48 (41%), Positives = 32/48 (66%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 381 D FE+ F+ Q ++ R+I Q+LD+ W+LL + PR L+RI K +D + Sbjct: 407 DLFEQYFLTQDEHEDRSISQTLDIGWSLLSLLPRTELYRIDPKLIDQY 454
>VATB_PYRFU (Q8U4A5) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 462 Score = 45.8 bits (107), Expect = 7e-05 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D+FER+FVAQG + R+I ++LDL W LL I P L R+ + + ++ + Sbjct: 406 DRFEREFVAQGYDEDRSIEETLDLGWELLAILPETELKRVKKEMIMKYHPK 456
>VATB_METKA (Q8TUT0) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type ATPase| subunit B) [Contains: Mka atpB intein] Length = 990 Score = 45.1 bits (105), Expect = 1e-04 Identities = 19/51 (37%), Positives = 33/51 (64%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D+FE++FV QG + R+I ++LDL W LL I P L R+ + ++ ++ + Sbjct: 930 DEFEQRFVKQGRDENRSIEETLDLGWELLAILPERELKRVSDELIEKYHPK 980
>NTPB_ENTHR (Q08637) V-type sodium ATP synthase subunit B (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit B) Length = 458 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 381 ++FE ++V QG Y R I ++LDL W LL + PR L RI LD + Sbjct: 406 ERFENEYVNQGFYTNRTITETLDLGWELLAMLPRTELKRIKDDLLDKY 453
>VATB_AERPE (Q9YF36) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 466 Score = 43.9 bits (102), Expect = 3e-04 Identities = 18/51 (35%), Positives = 33/51 (64%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D FE++F+ QG + R+I ++LD+AW +L + P E L I +T+ ++ + Sbjct: 412 DLFEQRFLKQGERENRSIEETLDIAWEILSVLPEEELVNIKEETIKKYHPK 462
>VATB_HALVO (Q48333) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 468 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/53 (37%), Positives = 32/53 (60%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDA 366 ++FE +FV QG R+I +LD+ W LL P+ L+RI + ++ +Y DA Sbjct: 409 ERFEAEFVNQGFDTDRSIEDTLDIGWDLLSTLPKSELNRIDEELIEDYYEDDA 461
>VATB_PYRKO (Q5JIR2) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 405 D+FER+FVAQ + R+IF++LDL W LL P L R+ Sbjct: 409 DRFEREFVAQRYDEDRSIFETLDLGWELLAELPESELKRV 448
>VATB_THESI (O32467) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 405 D+FER+FVAQ + R+IF++LDL W LL P L R+ Sbjct: 407 DRFEREFVAQRYDEDRSIFETLDLGWELLAELPESELKRV 446
>VATB_DESSY (O06505) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/40 (47%), Positives = 27/40 (67%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 405 D+FER+F+AQ + R+IF++LDL W LL P L R+ Sbjct: 407 DRFEREFIAQRYDEDRSIFETLDLGWELLAELPESELKRV 446
>VATB_PYRAE (Q8ZXR2) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 467 Score = 42.7 bits (99), Expect = 6e-04 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 372 D FE++F+ QG Y+ R+ ++LD+ W +L I P + L + FY R Sbjct: 409 DAFEQRFIKQGYYERRSFEETLDIGWDVLSILPEDELTNARPQITQKFYRR 459
>VATB_SULTO (Q971B6) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) (Sul-ATPase beta chain) Length = 465 Score = 40.4 bits (93), Expect = 0.003 Identities = 18/49 (36%), Positives = 30/49 (61%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 + FER+FVAQG + R+I +LD+ W +L I P L I ++ + ++ Sbjct: 410 EAFERRFVAQGVNENRSIETTLDIGWEVLSILPESELSLIRSEYIKKYH 458
>VATB_SULSO (Q9UWW8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 40.0 bits (92), Expect = 0.004 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 Query: 518 FERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 FERKFV+QG + R+I +LD+ W +L + P L I + + ++ Sbjct: 410 FERKFVSQGFNENRSIETTLDIGWEILSVLPESELTNIKTQYIQKYH 456
>VATB_METTH (O27035) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 39.7 bits (91), Expect = 0.005 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 405 D+FE++F+ Q + R+I ++L+L W LL + PR L R+ Sbjct: 411 DEFEKRFITQARDEDRSIEETLNLGWELLSLLPRSELKRV 450
>VATB_METBA (P22663) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 460 Score = 39.7 bits (91), Expect = 0.005 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 D FE++FV QG + R I +LD+ W +L P L RI K + ++ Sbjct: 405 DLFEQQFVTQGRNENRTIADTLDIGWKILAHLPENQLGRIDNKYIQKYH 453
>VATB_METMA (Q60187) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 460 Score = 37.7 bits (86), Expect = 0.019 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 D FE KFV QG + R I +L++ W +L P L RI K + ++ Sbjct: 405 DLFEDKFVRQGRNENRTIEDTLEIGWQILTHLPENQLGRIDNKYIQKYH 453
>VATB_METAC (Q8TIJ0) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 460 Score = 37.7 bits (86), Expect = 0.019 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 D FE KFV QG + R I +L++ W +L P L RI K + ++ Sbjct: 405 DLFEDKFVRQGRNENRTIEDTLEIGWQILTHLPENQLGRIDNKYIQKYH 453
>VATB_SULAC (Q4J8L8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 466 Score = 36.2 bits (82), Expect = 0.056 Identities = 14/49 (28%), Positives = 29/49 (59%) Frame = -1 Query: 524 DKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 378 ++FERKF+ QG + R+I +LD+ W ++ + P + I + + ++ Sbjct: 411 EQFERKFINQGINENRDIETTLDIGWEVISMLPESEISLIRTEYIKKYH 459
>RUMA_BURPS (Q63UT8) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 29.3 bits (64), Expect = 6.9 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 167 NITSCIVEPKHLSSFLVPLPRTVSK 93 ++TSC V P H+S+ LVPL R V + Sbjct: 177 DMTSCEVLPPHVSAMLVPLRRLVEQ 201
>RUMA_BURP1 (Q3JRP8) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 29.3 bits (64), Expect = 6.9 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 167 NITSCIVEPKHLSSFLVPLPRTVSK 93 ++TSC V P H+S+ LVPL R V + Sbjct: 177 DMTSCEVLPPHVSAMLVPLRRLVEQ 201
>RUMA_BURMA (Q62JV9) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 29.3 bits (64), Expect = 6.9 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 167 NITSCIVEPKHLSSFLVPLPRTVSK 93 ++TSC V P H+S+ LVPL R V + Sbjct: 177 DMTSCEVLPPHVSAMLVPLRRLVEQ 201
>TRER_SALTY (P36674) HTH-type transcriptional regulator treR (Trehalose operon| repressor) Length = 315 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/82 (24%), Positives = 35/82 (42%) Frame = +2 Query: 248 DLTIIITTAKRPEV*TAQFIQAALEKTLDLPTKMRSISGQHLCCRTHPKSSRGYGGAARE 427 D T ++ + ++++Q +TL L S+ L HP+ G A Sbjct: 232 DTTALVCATDTLALGASKYLQEQRIETLQLA----SVGNTPLIKFLHPEIVTVDPGYAEA 287 Query: 428 GRCEAMSMLSQVTGRCSEYRML 493 GR A ++ Q+ GRC R++ Sbjct: 288 GRQAASQLIEQINGRCDPRRIV 309
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%) Frame = +2 Query: 206 KSTNNLCSLT-----RKEWDLTIIITTAKRPEV*TAQFIQAALEKTLDL 337 K+T L +LT +++ +L +T K+ E+ T + + A LEKT+DL Sbjct: 90 KTTKGLKALTEVWAKQQDKELGRKLTVTKKEEIKTVESLDAVLEKTVDL 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,012,764 Number of Sequences: 219361 Number of extensions: 1394865 Number of successful extensions: 3526 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 3427 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3524 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
