| Clone Name | rbags17j10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107399.1| Zea mays PCO087601 mRNA sequence Length = 1198 Score = 54.0 bits (27), Expect = 9e-05 Identities = 27/27 (100%) Strand = Plus / Minus Query: 92 taactcagcaccccattattgcacagt 118 ||||||||||||||||||||||||||| Sbjct: 956 taactcagcaccccattattgcacagt 930
>ref|XM_473912.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1368 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 1368 tcagcaccccattattgcgcagt 1346
>emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 45456 tcagcaccccattattgcgcagt 45478
>emb|Z70688.1|HSN27C5 Human DNA sequence from clone LL22NC03-27C5 on chromosome 22, complete sequence Length = 41375 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 attataaggaagtggcagc 19 ||||||||||||||||||| Sbjct: 15826 attataaggaagtggcagc 15844
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 73368 tcagcaccccattattgcgcagt 73346
>dbj|AK061943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E01, full insert sequence Length = 662 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 412 tcagcaccccattattgcgcagt 390
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 31495685 tcagcaccccattattgcgcagt 31495663
>gb|AC093748.3| Homo sapiens BAC clone RP11-29P18 from 4, complete sequence Length = 112626 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 tttgctaaacaagtgggca 64 ||||||||||||||||||| Sbjct: 80847 tttgctaaacaagtgggca 80829
>dbj|AK065137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A05, full insert sequence Length = 1931 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 1678 tcagcaccccattattgcgcagt 1656
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 tcagcaccccattattgcacagt 118 |||||||||||||||||| |||| Sbjct: 113940 tcagcaccccattattgcgcagt 113918
>gb|AC005821.1|AC005821 Homo sapiens chromosome 17, clone hRPK.156_L_14, complete sequence Length = 174428 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 ttgctaaacaagtgggcat 65 ||||||||||||||||||| Sbjct: 19847 ttgctaaacaagtgggcat 19865
>dbj|AB032187.1| Oceanospirillum japonicum gyrB gene for DNA gyrase B subunit, partial cds Length = 1144 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ggtggttttgctaaacaag 58 ||||||||||||||||||| Sbjct: 954 ggtggttttgctaaacaag 972 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 612,440 Number of Sequences: 3902068 Number of extensions: 612440 Number of successful extensions: 38198 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38165 Number of HSP's gapped (non-prelim): 33 length of query: 118 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 97 effective length of database: 17,151,101,840 effective search space: 1663656878480 effective search space used: 1663656878480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)