| Clone Name | rbags17h22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103959.1| Zea mays PCO068678 mRNA sequence Length = 1621 Score = 377 bits (190), Expect = e-101 Identities = 367/426 (86%) Strand = Plus / Minus Query: 150 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 209 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1357 gcttctgctgcatctcctttcttgcctttcttcttcttcccaccacccttcttctttgat 1298 Query: 210 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 269 || || |||||||||||||| ||||| ||||| |||| || ||||||||||| | |||| Sbjct: 1297 ttcgtccccaaagcaagccatgcctttatctctgcattgtcttcaatggatttggtgggc 1238 Query: 270 tccaactgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacg 329 | |||| |||||| |||||||| || ||||| || || ||||| ||||||| || ||| Sbjct: 1237 tttaactcctgtagaggatgtgatgttatcttatctgatccattgggcatcagcagcaca 1178 Query: 330 gtgaatttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgc 389 ||||| || ||||| ||||||||||||||| |||| ||||| || |||||||| |||||| Sbjct: 1177 gtgaactttatgtgtgcaacaagatcgcctggcttctcatgaagtacagggtacggctgc 1118 Query: 390 aacagctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgcc 449 || || ||||| ||||||||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1117 aatagttcatggttcatgcattccaccaagcctaaacgcgcacgcttctcttctaatgcc 1058 Query: 450 ctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgat 509 |||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 1057 ctagcagtaaaaggcatgattgggaacttctggctgatctcactgaaaataaaccttgac 998 Query: 510 gccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttc 569 || ||||||||||||||||| ||||||||||| || || || || || |||||||| ||| Sbjct: 997 gctttcatcttcaagtgataattcttgtctacggcccttttgtagatggtggtctgtttc 938 Query: 570 tcatcc 575 |||||| Sbjct: 937 tcatcc 932 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 20 ccacagctgaatgtaatataacacaatcagatgcagc 56 ||||| |||||||||||||||||| |||||||||||| Sbjct: 1486 ccacaactgaatgtaatataacaccatcagatgcagc 1450
>gb|BT023967.1| Zea mays clone EL01N0406A06 mRNA sequence Length = 1422 Score = 345 bits (174), Expect = 1e-91 Identities = 360/422 (85%) Strand = Plus / Minus Query: 154 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 213 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 1189 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 1130 Query: 214 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 273 | |||||||||||||| ||||| ||||| |||| || ||||||||||||| |||| | Sbjct: 1129 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 1070 Query: 274 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 333 ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| |||| Sbjct: 1069 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 1010 Query: 334 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 393 | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| | Sbjct: 1009 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 950 Query: 394 gctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctag 453 ||||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||||| Sbjct: 949 gctcatggttcatgcattccaccaagcctaagcgtgcacgcttctcttctaatgccctag 890 Query: 454 cagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcct 513 ||||||| ||||||||||||||||||||||| || |||||||| || |||||||| || | Sbjct: 889 cagtgaagggcatgattgggaacttctggctgatttcactgaaaataaaccttgacgctt 830 Query: 514 tcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcat 573 ||||||||| || ||| |||||||||||||| || || || || || ||||||||||||| Sbjct: 829 tcatcttcaggttataattcttgtctacagcccttttgtagatggttgtctgcttctcat 770 Query: 574 cc 575 || Sbjct: 769 cc 768 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 26 ctgaatgtaatataacacaatcagatgcagc 56 |||||||||||||||||| |||||||||||| Sbjct: 1313 ctgaatgtaatataacaccatcagatgcagc 1283
>gb|BT016573.1| Zea mays clone Contig406 mRNA sequence Length = 583 Score = 283 bits (143), Expect = 3e-73 Identities = 284/331 (85%) Strand = Plus / Minus Query: 154 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 213 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 344 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 285 Query: 214 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 273 | |||||||||||||| ||||| ||||| |||| || ||||||||||||| |||| | Sbjct: 284 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 225 Query: 274 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 333 ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| |||| Sbjct: 224 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 165 Query: 334 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 393 | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| | Sbjct: 164 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 105 Query: 394 gctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctag 453 ||||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||||| Sbjct: 104 gctcatggttcatgcattccaccaagcctaagcgtgcacgcttctcttctaatgccctag 45 Query: 454 cagtgaatggcatgattgggaacttctggct 484 ||||||| ||||||||||||||||||||||| Sbjct: 44 cagtgaagggcatgattgggaacttctggct 14 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 26 ctgaatgtaatataacacaatcagatgcagc 56 |||||||||||||||||| |||||||||||| Sbjct: 468 ctgaatgtaatataacaccatcagatgcagc 438
>dbj|AK102897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P14, full insert sequence Length = 1530 Score = 278 bits (140), Expect = 2e-71 Identities = 215/240 (89%) Strand = Plus / Minus Query: 336 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 395 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1096 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1037 Query: 396 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 455 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1036 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 977 Query: 456 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 515 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 976 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 917 Query: 516 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcatcc 575 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 916 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttctcatcc 857 Score = 103 bits (52), Expect = 6e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 150 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 209 ||||||||||||||||||||||| |||||||| || || |||||| |||||||||| Sbjct: 1282 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1223 Query: 210 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 269 ||||| |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1222 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1163 Query: 270 tccaactgctgtagtg 285 | ||||| ||| |||| Sbjct: 1162 tgcaactcctgaagtg 1147 Score = 42.1 bits (21), Expect = 2.0 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 20 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 79 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 1407 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1351 Query: 80 ggaagcaattc 90 ||||||||||| Sbjct: 1350 ggaagcaattc 1340
>dbj|AK061712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G08, full insert sequence Length = 1427 Score = 278 bits (140), Expect = 2e-71 Identities = 215/240 (89%) Strand = Plus / Minus Query: 336 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 395 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1098 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1039 Query: 396 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 455 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1038 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 979 Query: 456 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 515 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 978 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 919 Query: 516 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcatcc 575 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 918 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttctcatcc 859 Score = 103 bits (52), Expect = 6e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 150 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 209 ||||||||||||||||||||||| |||||||| || || |||||| |||||||||| Sbjct: 1284 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1225 Query: 210 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 269 ||||| |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1224 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1165 Query: 270 tccaactgctgtagtg 285 | ||||| ||| |||| Sbjct: 1164 tgcaactcctgaagtg 1149 Score = 42.1 bits (21), Expect = 2.0 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 20 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 79 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 1409 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1353 Query: 80 ggaagcaattc 90 ||||||||||| Sbjct: 1352 ggaagcaattc 1342
>gb|AF020787.1|AF020787 Oryza sativa DNA-binding protein GBP16 (Rgbp16) mRNA, complete cds Length = 1422 Score = 278 bits (140), Expect = 2e-71 Identities = 215/240 (89%) Strand = Plus / Minus Query: 336 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 395 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1043 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 984 Query: 396 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 455 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 983 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 924 Query: 456 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 515 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 923 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 864 Query: 516 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcatcc 575 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 863 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttctcatcc 804 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 150 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 209 ||||||||||||||||||||||| |||||||| || | | |||||| |||||||||| Sbjct: 1229 gcttctgctgcatctcctttcttacctttcttcttttgggcaccacttttcttctttgtt 1170 Query: 210 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 269 || || |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1169 ttggtccccaaagcaagccatgccttgatctcagcgtggtcttcaatggatttagtgggc 1110 Query: 270 tccaac 275 | |||| Sbjct: 1109 tgcaac 1104 Score = 42.1 bits (21), Expect = 2.0 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 20 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 79 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 1354 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1298 Query: 80 ggaagcaattc 90 ||||||||||| Sbjct: 1297 ggaagcaattc 1287
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 449 cctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttga 508 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 59679 cctagcagtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctaga 59620 Query: 509 tgccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgctt 568 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 59619 tgctttcatcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgctt 59560 Query: 569 ctcatcc 575 ||||||| Sbjct: 59559 ctcatcc 59553 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 375 acagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgtgcacgc 434 |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 59828 acagggtacggctgcaataattcatgattcatgcattccaccaaacctaagcgtgcacgc 59769 Query: 435 ttctcctccaacgccct 451 ||||| ||||| ||||| Sbjct: 59768 ttctcttccaatgccct 59752 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 198 ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 257 |||||||||| ||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 60218 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 60159 Query: 258 gattttgagggctccaactgctgtagtg 285 ||||| | ||||| ||||| ||| |||| Sbjct: 60158 gatttagtgggctgcaactcctgaagtg 60131 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 150 gcttctgctgcatctcctttctt 172 ||||||||||||||||||||||| Sbjct: 60372 gcttctgctgcatctcctttctt 60350 Score = 42.1 bits (21), Expect = 2.0 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 20 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 79 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 60497 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 60441 Query: 80 ggaagcaattc 90 ||||||||||| Sbjct: 60440 ggaagcaattc 60430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 449 cctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttga 508 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 16419242 cctagcagtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctaga 16419183 Query: 509 tgccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgctt 568 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 16419182 tgctttcatcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgctt 16419123 Query: 569 ctcatcc 575 ||||||| Sbjct: 16419122 ctcatcc 16419116 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 375 acagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgtgcacgc 434 |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 16419391 acagggtacggctgcaataattcatgattcatgcattccaccaaacctaagcgtgcacgc 16419332 Query: 435 ttctcctccaacgccct 451 ||||| ||||| ||||| Sbjct: 16419331 ttctcttccaatgccct 16419315 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 198 ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 257 |||||||||| ||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 16419781 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 16419722 Query: 258 gattttgagggctccaactgctgtagtg 285 ||||| | ||||| ||||| ||| |||| Sbjct: 16419721 gatttagtgggctgcaactcctgaagtg 16419694 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 150 gcttctgctgcatctcctttctt 172 ||||||||||||||||||||||| Sbjct: 16419935 gcttctgctgcatctcctttctt 16419913 Score = 42.1 bits (21), Expect = 2.0 Identities = 59/71 (83%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 20 ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 79 ||||| |||||||| |||||| | ||||||||||| |||||| ||||||| |||| Sbjct: 16420060 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 16420004 Query: 80 ggaagcaattc 90 ||||||||||| Sbjct: 16420003 ggaagcaattc 16419993
>gb|BT013897.1| Lycopersicon esculentum clone 132894F, mRNA sequence Length = 1587 Score = 125 bits (63), Expect = 2e-25 Identities = 216/267 (80%) Strand = Plus / Minus Query: 309 ccatttggcatcaacaacacggtgaatttgatgtgggcaacaagatcgccttgcttttca 368 ||||| ||||| |||| ||| ||||| || ||||| ||||| | ||| || | || ||| Sbjct: 1174 ccattaggcattaacagcactgtgaacttaatgtgagcaaccaaatcaccaggtttctca 1115 Query: 369 tggagaacagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgt 428 || |||||||| ||||||||||| |||||||| || | ||||| || | || || || Sbjct: 1114 tgtagaacaggatatggctgcaaaagctcatggttaacacattcaacaaggcccaaacga 1055 Query: 429 gcacgcttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatc 488 || | |||||||||||| |||| || || ||||||||||| ||||||||||| || || Sbjct: 1054 gctctcttctcctccaaatcccttgcggtaaatggcatgatagggaacttctgactgatt 995 Query: 489 tcactgaagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctc 548 |||||||||||||||||||| || |||||||||| || |||| ||||||| ||||||||| Sbjct: 994 tcactgaagatgaaccttgaggctttcatcttcaggttatagctcttgtccacagctctc 935 Query: 549 ttataaatagtggtctgcttctcatcc 575 || || || || || || ||||||||| Sbjct: 934 ttgtagatcgttgtttgtttctcatcc 908 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 165 cctttcttgcctttctttttcttgccaccacccttcttctt 205 |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 1318 cctttctttcctttctttttcttcccaccacctttcttctt 1278
>gb|AF281652.1|AF281652 Atriplex hortensis putative DNA binding protein mRNA, complete cds Length = 1460 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 434 cttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcact 493 |||||||||||||||||| || || ||||||||||| ||||| ||||| | || ||||| Sbjct: 934 cttctcctccaacgcccttgctgtaaatggcatgatagggaatttctgattgatttcact 875 Query: 494 gaagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttata 553 ||| || || |||||||| ||||| ||||||||||| |||||||| |||||||| || || Sbjct: 874 gaaaataaatcttgatgctttcattttcaagtgataattcttgtccacagctcttttgta 815 Query: 554 aatagtggtctgcttctc 571 |||||| || |||||||| Sbjct: 814 aatagttgtttgcttctc 797
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 162 tctcctttcttgcctttctttttct 186 ||||||||||||||||||||||||| Sbjct: 18789971 tctcctttcttgcctttctttttct 18789995
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 162 tctcctttcttgcctttctttttct 186 ||||||||||||||||||||||||| Sbjct: 132613 tctcctttcttgcctttctttttct 132637
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 162 tctcctttcttgcctttctttttct 186 ||||||||||||||||||||||||| Sbjct: 35336 tctcctttcttgcctttctttttct 35360
>ref|XM_795059.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581850 (LOC581850), mRNA Length = 1673 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 168 ttcttgcctttctttttcttgcc 190 ||||||||||||||||||||||| Sbjct: 719 ttcttgcctttctttttcttgcc 697
>ref|NM_115039.2| Arabidopsis thaliana ATG2; metalloexopeptidase/ methionyl aminopeptidase AT3G51800 (ATG2) transcript variant AT3G51800.1 mRNA, complete cds Length = 1514 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagtt 855
>ref|NM_180348.1| Arabidopsis thaliana ATG2; metalloexopeptidase/ methionyl aminopeptidase AT3G51800 (ATG2) transcript variant AT3G51800.2 mRNA, complete cds Length = 1541 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagtt 855
>gb|AY142627.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (At3g51800) mRNA, complete cds Length = 1210 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagtt 754
>gb|AY040067.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (At3g51800) mRNA, complete cds Length = 1179 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagtt 754
>gb|AF360226.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (AT3g51800) mRNA, complete cds Length = 1458 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagtt 855
>gb|AF422841.1| Arabidopsis thaliana cell cycle-related nuclear binding protein (cam1) mRNA, complete cds Length = 1179 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagtt 754
>gb|AF332664.1|AF332664 Bothrops alternatus clone BA5 Bov-B LINE, complete sequence Length = 1746 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctttcttgcctttctttttctt 187 |||||||||||||||||||||| Sbjct: 634 ctttcttgcctttctttttctt 613
>gb|AY056616.1| Arabidopsis thaliana nuclear DNA-binding protein (CAM1) mRNA, complete cds Length = 1472 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 947 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 888 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 887 attatgaatctggaggccttcatcttcaactgatagtt 850
>emb|BX823040.1|CNS0A71F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZF08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1379 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 926 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 867 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 866 attatgaatctggaggccttcatcttcaactgatagtt 829
>gb|AF300703.1|AF300703 Oryctolagus cuniculus parathyroid hormone-related protein (PTHrP) mRNA, complete cds Length = 534 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 cttgcctttctttttcttgcca 191 |||||||||||||||||||||| Sbjct: 387 cttgcctttctttttcttgcca 366
>gb|U72503.1|ATU72503 Arabidopsis thaliana putative nuclear DNA-binding protein G2p (AtG2) mRNA, complete cds Length = 1472 Score = 44.1 bits (22), Expect = 0.50 Identities = 79/98 (80%) Strand = Plus / Minus Query: 435 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 494 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 947 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 888 Query: 495 aagatgaaccttgatgccttcatcttcaagtgatagtt 532 | ||||| || || |||||||||||||| |||||||| Sbjct: 887 attatgaatctggaggccttcatcttcaactgatagtt 850
>ref|NM_001003303.1| Canis familiaris parathyroid hormone-like hormone (PTHLH), mRNA Length = 1166 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ttgcctttctttttcttgcca 191 ||||||||||||||||||||| Sbjct: 553 ttgcctttctttttcttgcca 533
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 188357 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 tttcttgcctttctttttctt 187 ||||||||||||||||||||| Sbjct: 86946 tttcttgcctttctttttctt 86966
>emb|AJ831410.1| Halichoerus grypus partial mRNA for parathyroid hormone related protein (pthlp gene) Length = 1099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ttgcctttctttttcttgcca 191 ||||||||||||||||||||| Sbjct: 725 ttgcctttctttttcttgcca 705
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence Length = 191035 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgaatgtaatataacacaat 46 ||||||||||||||||||||| Sbjct: 87455 ctgaatgtaatataacacaat 87435
>gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, complete sequence Length = 167799 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 ctcctttcttgcctttctttt 183 ||||||||||||||||||||| Sbjct: 107524 ctcctttcttgcctttctttt 107544
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgaatgtaatataacacaat 46 ||||||||||||||||||||| Sbjct: 6299 ctgaatgtaatataacacaat 6319
>gb|AF327654.1|AF327654 Ovis aries parathyroid hormone-related peptide mRNA, partial cds Length = 363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cttgcctttctttttcttgcc 190 ||||||||||||||||||||| Sbjct: 357 cttgcctttctttttcttgcc 337
>gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2, complete sequence Length = 79931 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 ctcctttcttgcctttctttt 183 ||||||||||||||||||||| Sbjct: 5003 ctcctttcttgcctttctttt 4983
>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete sequence Length = 196606 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ctttcttgcctttctttttct 186 ||||||||||||||||||||| Sbjct: 73425 ctttcttgcctttctttttct 73405
>gb|U15593.1|CFU15593 Canis familiaris parathyroid hormone-related protein mRNA, complete cds Length = 1166 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ttgcctttctttttcttgcca 191 ||||||||||||||||||||| Sbjct: 553 ttgcctttctttttcttgcca 533
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 gctgcatctcctttcttgcctttc 179 |||||||| ||||||||||||||| Sbjct: 57177 gctgcatcccctttcttgcctttc 57154
>gb|BC068955.1| Xenopus laevis hypothetical protein MGC83228, mRNA (cDNA clone MGC:83228 IMAGE:6635611), complete cds Length = 3638 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ttcttgcctttctttttctt 187 |||||||||||||||||||| Sbjct: 785 ttcttgcctttctttttctt 766
>ref|XM_716436.1| Candida albicans SC5314 hypothetical protein (CaO19_3031), mRNA Length = 882 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ttcttgcctttctttttctt 187 |||||||||||||||||||| Sbjct: 740 ttcttgcctttctttttctt 721
>ref|XM_716165.1| Candida albicans SC5314 hypothetical protein (CaO19_10549), mRNA Length = 882 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ttcttgcctttctttttctt 187 |||||||||||||||||||| Sbjct: 740 ttcttgcctttctttttctt 721
>gb|AY193782.2| Sus scrofa parathyroid hormone-like hormone mRNA, complete cds Length = 1336 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ttgcctttctttttcttgcc 190 |||||||||||||||||||| Sbjct: 705 ttgcctttctttttcttgcc 686
>emb|CR762428.7| Zebrafish DNA sequence from clone CH211-172N16 in linkage group 1, complete sequence Length = 140219 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 gcagtgaatggcatgattgg 472 |||||||||||||||||||| Sbjct: 98074 gcagtgaatggcatgattgg 98055
>ref|XM_447914.1| Candida glabrata CBS138, CAGL0J04796g partial mRNA Length = 1800 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tcttgcctttctttttcttg 188 |||||||||||||||||||| Sbjct: 1765 tcttgcctttctttttcttg 1746
>ref|XM_797333.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein (Tc00.1047053511619.5) partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ccttcttctttgactttgtgccca 219 ||||||||||||||||||| |||| Sbjct: 25 ccttcttctttgactttgtcccca 2
>ref|XM_798036.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein (Tc00.1047053507207.19) partial mRNA Length = 1953 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ccttcttctttgactttgtgccca 219 ||||||||||||||||||| |||| Sbjct: 25 ccttcttctttgactttgtcccca 2
>gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, complete sequence Length = 112456 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tctcctttcttgcctttctt 181 |||||||||||||||||||| Sbjct: 23468 tctcctttcttgcctttctt 23449
>gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complete sequence Length = 135727 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ggcttctgctgcatctcctt 168 |||||||||||||||||||| Sbjct: 133820 ggcttctgctgcatctcctt 133839
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence Length = 168008 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tctcctttcttgcctttctt 181 |||||||||||||||||||| Sbjct: 57285 tctcctttcttgcctttctt 57304
>emb|AL593854.6| Human DNA sequence from clone RP11-423B13 on chromosome 6 Contains the 5' part of a novel gene, complete sequence Length = 166869 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctttcttgcctttctttt 183 |||||||||||||||||||| Sbjct: 98161 tcctttcttgcctttctttt 98142
>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains ubiquinol-cytochrome c reductase binding (UQCRB) pseudogene, the UAP1 gene for UDP-N-acteylglucosamine pyrophosphorylase 1, the 5' end of the DDR2 gene for discoidin domain receptor family member 2 and a CpG island, complete sequence Length = 152770 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcctttcttgcctttctttttctt 187 ||||||||| |||||||||||||| Sbjct: 79267 tcctttctttcctttctttttctt 79244
>emb|AL589787.16| Human DNA sequence from clone RP11-422P15 on chromosome 10 Contans the 5' end of the ADAM12 gene for a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna), a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 146287 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcctttcttgcctttctttttctt 187 ||||||||| |||||||||||||| Sbjct: 17395 tcctttctttcctttctttttctt 17372
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence Length = 199946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ggtgaatttgatgtgggcaa 348 |||||||||||||||||||| Sbjct: 167175 ggtgaatttgatgtgggcaa 167194
>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2 Contains the 3' end of a novel gene and the gene for a novel actin like protein (LOC81569), complete sequence Length = 154028 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aacacggtgaatttgatgtg 343 |||||||||||||||||||| Sbjct: 73796 aacacggtgaatttgatgtg 73777
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cttgatctccgcatcatcct 252 |||||||||||||||||||| Sbjct: 352297 cttgatctccgcatcatcct 352278
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tcttgcctttctttttcttg 188 |||||||||||||||||||| Sbjct: 455461 tcttgcctttctttttcttg 455442
>gb|DQ099524.1| Rabies virus strain FluryLEP nucleoprotein (NP), phosphoprotein (PP), matrix protein (MP), glycoprotein (GP), and large protein (LP) genes, complete cds Length = 11711 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 2130 actgaagatgaaccttgatg 2149
>emb|AJ831411.1| Phoca vitulina partial mRNA for parathyroid hormone related protein (pthlp gene) Length = 1366 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ttgcctttctttttcttgcc 190 |||||||||||||||||||| Sbjct: 725 ttgcctttctttttcttgcc 706
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 cttgatgccttcatcttcaa 523 |||||||||||||||||||| Sbjct: 1550817 cttgatgccttcatcttcaa 1550836
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1, complete sequence Length = 104059 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 ctttcttgcctttctttttcttgc 189 ||||||| |||||||||||||||| Sbjct: 98034 ctttctttcctttctttttcttgc 98011
>gb|AY056617.1| Arabidopsis thaliana nuclear DNA-binding protein (CAM1) gene, complete cds Length = 4106 Score = 40.1 bits (20), Expect = 7.8 Identities = 65/80 (81%) Strand = Plus / Minus Query: 453 gcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcc 512 |||||||||||||| ||||| ||||| |||| || |||| ||||| || || ||| Sbjct: 2893 gcagtgaatggcatacgggggaagttctgtttaatttcgctgattatgaatctggaggcc 2834 Query: 513 ttcatcttcaagtgatagtt 532 ||||||||||| |||||||| Sbjct: 2833 ttcatcttcaactgatagtt 2814
>dbj|AB226447.1| Aspergillus oryzae cDNA, contig sequence: AoEST3309 Length = 924 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctgcggcttctgctgcatct 164 |||||||||||||||||||| Sbjct: 72 ctgcggcttctgctgcatct 53
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctgcggcttctgctgcatct 164 |||||||||||||||||||| Sbjct: 833584 ctgcggcttctgctgcatct 833565
>gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, complete sequence Length = 162705 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cctttcttgcctttctttttcttg 188 ||||| |||||||||||||||||| Sbjct: 45537 cctttgttgcctttctttttcttg 45560
>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence Length = 243558 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcctttcttgcctttctttttctt 187 ||||||||| |||||||||||||| Sbjct: 123300 tcctttctttcctttctttttctt 123277
>ref|XM_700817.1| PREDICTED: Danio rerio hypothetical protein LOC561194 (LOC561194), partial mRNA Length = 932 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 ctttcttgcctttctttttcttgc 189 ||||||| |||||||||||||||| Sbjct: 215 ctttctttcctttctttttcttgc 192
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence Length = 198179 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ggtgaatttgatgtgggcaa 348 |||||||||||||||||||| Sbjct: 133062 ggtgaatttgatgtgggcaa 133043
>gb|AF369346.1|AF369346 Rabies virus V077.SHB phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369329.1|AF369329 Rabies virus V466.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369327.1|AF369327 Rabies virus V463.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369316.1|AF369316 Rabies virus C1.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369264.1|AF369264 Rabies virus V015 phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete sequence Length = 182382 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tccaactgctgtagtggatg 289 |||||||||||||||||||| Sbjct: 86727 tccaactgctgtagtggatg 86708
>gb|DQ011221.1| Rabies virus strain 98 phosphoprotein mRNA, complete cds Length = 914 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 698 actgaagatgaaccttgatg 717
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 tcctttcttgcctttctttttctt 187 ||||||||| |||||||||||||| Sbjct: 700316 tcctttctttcctttctttttctt 700339
>gb|AC090021.21| Homo sapiens 12 BAC RP11-569H7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55295 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 544 ctctcttataaatagtggtctgcttctc 571 |||| ||||||||| ||||||||||||| Sbjct: 1403 ctcttttataaatattggtctgcttctc 1430
>ref|NM_213916.1| Sus scrofa parathyroid hormone-like hormone (PTHLH), mRNA Length = 1336 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ttgcctttctttttcttgcc 190 |||||||||||||||||||| Sbjct: 705 ttgcctttctttttcttgcc 686
>gb|AC125605.4| Homo sapiens 12 BAC RP11-251H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 45834 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 544 ctctcttataaatagtggtctgcttctc 571 |||| ||||||||| ||||||||||||| Sbjct: 602 ctcttttataaatattggtctgcttctc 575
>gb|AC010358.5|AC010358 Homo sapiens chromosome 5 clone CTD-2031C5, complete sequence Length = 159129 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcctttcttgcctttctttttctt 187 ||||||||| |||||||||||||| Sbjct: 142931 tcctttctttcctttctttttctt 142908
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cttgatctccgcatcatcct 252 |||||||||||||||||||| Sbjct: 405488 cttgatctccgcatcatcct 405469
>emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chromosome X, complete sequence Length = 189991 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ctttctttttcttgccacca 194 |||||||||||||||||||| Sbjct: 163125 ctttctttttcttgccacca 163106
>emb|X13357.1|RHLNMG Rabies virus 3'region of genome encoding leader RNA, N, M1, M2 and G proteins Length = 3385 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 2199 actgaagatgaaccttgatg 2218
>emb|X57783.1|RAVNSPG Rabies virus NS protein gene Length = 991 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 716 actgaagatgaaccttgatg 735
>emb|X55727.1|RHABNSPP Rabies virus CVS-11 NS-phosphoprotein gene Length = 991 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 actgaagatgaaccttgatg 510 |||||||||||||||||||| Sbjct: 716 actgaagatgaaccttgatg 735
>gb|AF049236.1|AF049236 Arabidopsis thaliana putative transmembrane protein G1p (AtG1), putative nuclear DNA-binding protein G2p (AtG2), Em1 protein (ATEM1), putative chlorophyll synthetase (AtG4), putative transmembrane protein G5p (AtG5), putative acyl-coA dehydrogenase (AtG6), and calcium dependent protein kinase genes, complete cds; and unknown genes Length = 60000 Score = 40.1 bits (20), Expect = 7.8 Identities = 65/80 (81%) Strand = Plus / Plus Query: 453 gcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcc 512 |||||||||||||| ||||| ||||| |||| || |||| ||||| || || ||| Sbjct: 14248 gcagtgaatggcatacgggggaagttctgtttaatttcgctgattatgaatctggaggcc 14307 Query: 513 ttcatcttcaagtgatagtt 532 ||||||||||| |||||||| Sbjct: 14308 ttcatcttcaactgatagtt 14327
>dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-676M6, complete sequence Length = 204955 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcctttcttgcctttctttttctt 187 ||||||||| |||||||||||||| Sbjct: 152384 tcctttctttcctttctttttctt 152361
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gactttgtgcccaaagcaag 226 |||||||||||||||||||| Sbjct: 58146 gactttgtgcccaaagcaag 58127
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence Length = 183664 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 140 gggctctgc-ggcttctgctgcatctcctttc 170 ||||||||| |||||||||||||||| ||||| Sbjct: 81392 gggctctgcaggcttctgctgcatctactttc 81423 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,175,913 Number of Sequences: 3902068 Number of extensions: 6175913 Number of successful extensions: 124737 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 124387 Number of HSP's gapped (non-prelim): 346 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)