ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17h21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full ... 632 e-178
2gb|AY109357.1| Zea mays CL881_1 mRNA sequence 230 5e-57
3dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
4dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
5dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
6dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
7dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
8gb|AY111526.1| Zea mays CL881_3 mRNA sequence 186 6e-44
9dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
10dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
11dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
12ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa851... 165 2e-37
13gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full... 96 2e-16
14emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4,... 88 4e-14
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
16gb|BT013764.1| Lycopersicon esculentum clone 132647R, mRNA sequence 84 7e-13
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
18dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
19ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 ... 78 4e-11
20dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-lik... 78 4e-11
21dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative... 78 4e-11
22gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete se... 72 3e-09
23gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete seq... 72 3e-09
24emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE... 70 1e-08
25ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 ... 66 2e-07
26gb|DQ321491.1| Nicotiana benthamiana AGO4-2 mRNA, partial cds 66 2e-07
27gb|AY104211.1| Zea mays PCO124720 mRNA sequence 62 2e-06
28gb|BT018108.1| Zea mays clone EL01N0553E01.c mRNA sequence 58 4e-05
29ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G270... 54 6e-04
30gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 prot... 54 6e-04
31gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) pr... 54 6e-04
32emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
33ref|XM_477327.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
34gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pin... 52 0.002
35gb|AY072819.1| Oryza sativa zwille/pinhead-like protein mRNA, pa... 52 0.002
36dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
37gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete se... 48 0.037
38gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 geno... 48 0.037
39gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana... 48 0.037
40gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-6... 48 0.037
41dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone... 48 0.037
42dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
43gb|DQ321490.1| Nicotiana benthamiana AGO4-1 mRNA, partial cds 46 0.14
44ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 ... 42 2.3
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.3
46gb|BC033195.1| Homo sapiens leukocyte receptor cluster (LRC) mem... 42 2.3
47emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chr... 42 2.3
48emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on ch... 42 2.3
49gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
50ref|NM_033206.1| Homo sapiens leukocyte receptor cluster (LRC) m... 42 2.3
51emb|CR759950.3| Gorilla DNA sequence from clone CH255-431H18, co... 42 2.3
52gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 geno... 42 2.3
53gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, comple... 42 2.3
54gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, comp... 42 2.3
55gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
57gb|AC022882.5|AC022882 Homo sapiens chromosome 11, clone RP11-44... 42 2.3
58gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete... 42 2.3
59gb|AC009892.5|AC009892 Homo sapiens chromosome 19 clone CTB-83J4... 42 2.3
60gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 42 2.3
61dbj|AK024467.1| Homo sapiens mRNA for FLJ00060 protein, partial cds 42 2.3
62ref|XM_309632.2| Anopheles gambiae str. PEST ENSANGP00000004077 ... 42 2.3
63emb|AL928586.10| Mouse DNA sequence from clone RP23-353H5 on chr... 42 2.3
64dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
65gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete s... 40 8.9
66gb|AC134242.17| Medicago truncatula clone mth2-10p20, complete s... 40 8.9
67gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete seq... 40 8.9
68emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chro... 40 8.9
69emb|AL139137.15| Human DNA sequence from clone RP11-58O13 on chr... 40 8.9
70emb|CR352964.1| Gallus gallus finished cDNA, clone ChEST539n4 40 8.9
71dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
72dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
73gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, c... 40 8.9
74gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, co... 40 8.9
75emb|BX511094.6| Zebrafish DNA sequence from clone CH211-137G12 i... 40 8.9

>gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full insert mRNA sequence
          Length = 2815

 Score =  632 bits (319), Expect = e-178
 Identities = 402/430 (93%), Gaps = 6/430 (1%)
 Strand = Plus / Minus

                                                                        
Query: 226  aagcgcatcaccaaaagttggaacgcgcaagtgcgactagc------gctcagcagaaga 279
            ||||||||||||||||||||||||||||||||||| || ||      |||||||||||||
Sbjct: 2620 aagcgcatcaccaaaagttggaacgcgcaagtgcggctggctggctggctcagcagaaga 2561

                                                                        
Query: 280  acatgctgctgcggactttctcatggagacgaggcagctcctgcaccgggccgctggcag 339
            |||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| | |
Sbjct: 2560 acatgctgctgcggactttctcatggaggcgaggcagctcctgcactggagcgctgccgg 2501

                                                                        
Query: 340  tagaggtgtggccaccaccctggctcgacgacgtctcggacatctcatcaaactttatga 399
             ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2500 cagaggtgtggccaccgccctggctcgacgacgtctcagacatctcatcaaactttatga 2441

                                                                        
Query: 400  actgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattg 459
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 2440 actgcgccacctgagcagccgcaagatgtgcatagcagattggagaaacaactgatatgg 2381

                                                                        
Query: 460  ctgttgtgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccg 519
            |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 2380 ctgtcgtgctcctttggtacacatatgagagcgagtgcacaagatcctgcaggtcatccg 2321

                                                                        
Query: 520  cggcaaagtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatca 579
            | |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 2320 cagcaaagtgtatctcatcatgcaggatatggtagtgtgttggccttgtagtcccaatca 2261

                                                                        
Query: 580  ttccagcatgagcgcacatgtaaaagtcataattccttggatggcagacagcattatcaa 639
            |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
Sbjct: 2260 ttccagcatgagcgcacatgtagaagtcataattccttggatggcagactgcattatcta 2201

                      
Query: 640  caacagtgcc 649
            ||||||||||
Sbjct: 2200 caacagtgcc 2191



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 79/89 (88%), Gaps = 3/89 (3%)
 Strand = Plus / Minus

                                                                        
Query: 113  caaaggttctgaggcaccaaagtgtggcagcaagcttaggaacacaacatcccaggtgtc 172
            |||||||||||||||||||| |||  ||| | |||||||||||||||||||||||| |||
Sbjct: 2728 caaaggttctgaggcaccaa-gtgcagcaaccagcttaggaacacaacatcccaggagtc 2670

                                         
Query: 173  caacaggtcatcaaaggggccactactac 201
            ||||||| ||||| |  ||||||||||||
Sbjct: 2669 caacaggccatcaca--ggccactactac 2643



to top

>gb|AY109357.1| Zea mays CL881_1 mRNA sequence
          Length = 3158

 Score =  230 bits (116), Expect = 5e-57
 Identities = 224/260 (86%)
 Strand = Plus / Minus

                                                                        
Query: 369  gacgtctcggacatctcatcaaactttatgaactgcgccacctgagcagctgcaagatgt 428
            |||||||| ||||||||||| ||||||||||||||  | |||||||||||||| ||||||
Sbjct: 2743 gacgtctccgacatctcatcgaactttatgaactggccaacctgagcagctgccagatgt 2684

                                                                        
Query: 429  gcatagcagattggagaaacaactgatattgctgttgtgctcctttggtacacataagag 488
            || |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 2683 gcgtagcagatgggagcaacgactgatatggctgttgtgctcctttggtacacataagag 2624

                                                                        
Query: 489  agcgaatgcacaagatcctgcaggtcatccgcggcaaagtgtatctcatcatgcaggata 548
            ||||||||||| || |||||||| ||||| |     |||  |||||||||||||||||| 
Sbjct: 2623 agcgaatgcaccagctcctgcagatcatcaggactgaagcctatctcatcatgcaggatg 2564

                                                                        
Query: 549  tggtaatgtgttggccttgttgtcccaatcattccagcatgagcgcacatgtaaaagtca 608
            ||||| || |||||||| || ||||| |||||||||||||| || |||||||| || || 
Sbjct: 2563 tggtagtgagttggcctcgtagtcccgatcattccagcatgcgcacacatgtagaaatcg 2504

                                
Query: 609  taattccttggatggcagac 628
             | ||| |||||||||||||
Sbjct: 2503 aagttctttggatggcagac 2484



to top

>dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H08, full
            insert sequence
          Length = 3385

 Score =  198 bits (100), Expect = 2e-47
 Identities = 190/220 (86%)
 Strand = Plus / Minus

                                                                        
Query: 406  ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 465
            ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 2903 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 2844

                                                                        
Query: 466  tgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaa 525
            |||| || || |||||||||||||| || ||||| || |||||||| ||||| | ||  |
Sbjct: 2843 tgcttctctgatacacataagagagtgagtgcactagctcctgcagatcatcaggggaga 2784

                                                                        
Query: 526  agtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattccag 585
            |   ||||||||| ||||| | ||| |||||||||||||| || || |||||||||||||
Sbjct: 2783 aacctatctcatcgtgcagaacatgataatgtgttggcctcgtcgttccaatcattccag 2724

                                                    
Query: 586  catgagcgcacatgtaaaagtcataattccttggatggca 625
            ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 2723 catgagcacacatgtagaagtcataattccttggatggca 2684



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
            ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 3037 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 2978



to top

>dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C06, full
            insert sequence
          Length = 1885

 Score =  198 bits (100), Expect = 2e-47
 Identities = 190/220 (86%)
 Strand = Plus / Minus

                                                                        
Query: 406  ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 465
            ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 1451 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 1392

                                                                        
Query: 466  tgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaa 525
            |||| || || |||||||||||||| || ||||| || |||||||| ||||| | ||  |
Sbjct: 1391 tgcttctctgatacacataagagagtgagtgcactagctcctgcagatcatcaggggaga 1332

                                                                        
Query: 526  agtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattccag 585
            |   ||||||||| ||||| | ||| |||||||||||||| || || |||||||||||||
Sbjct: 1331 aacctatctcatcgtgcagaacatgataatgtgttggcctcgtcgttccaatcattccag 1272

                                                    
Query: 586  catgagcgcacatgtaaaagtcataattccttggatggca 625
            ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1271 catgagcacacatgtagaagtcataattccttggatggca 1232



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
            ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 1585 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 1526



to top

>dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H02, full
           insert sequence
          Length = 1196

 Score =  198 bits (100), Expect = 2e-47
 Identities = 190/220 (86%)
 Strand = Plus / Minus

                                                                       
Query: 406 ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 465
           ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 762 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 703

                                                                       
Query: 466 tgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaa 525
           |||| || || |||||||||||||| || ||||| || |||||||| ||||| | ||  |
Sbjct: 702 tgcttctctgatacacataagagagtgagtgcactagctcctgcagatcatcaggggaga 643

                                                                       
Query: 526 agtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattccag 585
           |   ||||||||| ||||| | ||| |||||||||||||| || || |||||||||||||
Sbjct: 642 aacctatctcatcgtgcagaacatgataatgtgttggcctcgtcgttccaatcattccag 583

                                                   
Query: 586 catgagcgcacatgtaaaagtcataattccttggatggca 625
           ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 582 catgagcacacatgtagaagtcataattccttggatggca 543



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 269 tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
           ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 896 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 837



to top

>dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L10, full
            insert sequence
          Length = 3178

 Score =  198 bits (100), Expect = 2e-47
 Identities = 190/220 (86%)
 Strand = Plus / Minus

                                                                        
Query: 406  ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 465
            ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 2721 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 2662

                                                                        
Query: 466  tgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaa 525
            |||| || || |||||||||||||| || ||||| || |||||||| ||||| | ||  |
Sbjct: 2661 tgcttctctgatacacataagagagtgagtgcactagctcctgcagatcatcaggggaga 2602

                                                                        
Query: 526  agtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattccag 585
            |   ||||||||| ||||| | ||| |||||||||||||| || || |||||||||||||
Sbjct: 2601 aacctatctcatcgtgcagaacatgataatgtgttggcctcgtcgttccaatcattccag 2542

                                                    
Query: 586  catgagcgcacatgtaaaagtcataattccttggatggca 625
            ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 2541 catgagcacacatgtagaagtcataattccttggatggca 2502



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
            ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 2855 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 2796



to top

>dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F07, full
           insert sequence
          Length = 1196

 Score =  198 bits (100), Expect = 2e-47
 Identities = 190/220 (86%)
 Strand = Plus / Minus

                                                                       
Query: 406 ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 465
           ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 762 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 703

                                                                       
Query: 466 tgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaa 525
           |||| || || |||||||||||||| || ||||| || |||||||| ||||| | ||  |
Sbjct: 702 tgcttctctgatacacataagagagtgagtgcactagctcctgcagatcatcaggggaga 643

                                                                       
Query: 526 agtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattccag 585
           |   ||||||||| ||||| | ||| |||||||||||||| || || |||||||||||||
Sbjct: 642 aacctatctcatcgtgcagaacatgataatgtgttggcctcgtcgttccaatcattccag 583

                                                   
Query: 586 catgagcgcacatgtaaaagtcataattccttggatggca 625
           ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 582 catgagcacacatgtagaagtcataattccttggatggca 543



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 269 tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
           ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 896 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 837



to top

>gb|AY111526.1| Zea mays CL881_3 mRNA sequence
          Length = 628

 Score =  186 bits (94), Expect = 6e-44
 Identities = 187/218 (85%)
 Strand = Plus / Minus

                                                                       
Query: 372 gtctcggacatctcatcaaactttatgaactgcgccacctgagcagctgcaagatgtgca 431
           ||||| |||||||| || ||||||||||||||| | ||||| || |||||||| || || 
Sbjct: 239 gtctccgacatctcgtcgaactttatgaactgcccaacctgggcggctgcaaggtgggcg 180

                                                                       
Query: 432 tagcagattggagaaacaactgatattgctgttgtgctcctttggtacacataagagagc 491
           |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 179 tagcagatgggagcaacaactgatatggctgttgtgctcctttggtacacataagagagc 120

                                                                       
Query: 492 gaatgcacaagatcctgcaggtcatccgcggcaaagtgtatctcatcatgcaggatatgg 551
           || ||||| || |||||||||||||| |     |||  |||||| ||||||||||| || 
Sbjct: 119 gagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtga 60

                                                 
Query: 552 taatgtgttggccttgttgtcccaatcattccagcatg 589
           || || |||||||| || ||||||||||||||||||||
Sbjct: 59  tagtgagttggcctggtagtcccaatcattccagcatg 22



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 267 gctcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 326
           ||||||||||||||||||  ||| |  ||||||||||| ||||| ||||||||||| || 
Sbjct: 341 gctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctggaca 282

                    
Query: 327 gggccgctg 335
           ||| |||||
Sbjct: 281 gggacgctg 273



to top

>dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L20, full
            insert sequence
          Length = 3027

 Score =  168 bits (85), Expect = 1e-38
 Identities = 312/387 (80%), Gaps = 3/387 (0%)
 Strand = Plus / Minus

                                                                        
Query: 267  gctcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 326
            ||||||||||||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 2865 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 2806

                                                                        
Query: 327  gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 386
            ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 2805 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 2749

                                                                        
Query: 387  tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaa 446
            || ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |
Sbjct: 2748 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 2689

                                                                        
Query: 447  acaactgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaagatcc 506
            || |||||||| ||||| |||||||| ||||| ||||| || || || || || |  |||
Sbjct: 2688 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 2629

                                                                        
Query: 507  tgcaggtcatccgcggcaaagtgtatctcatcatgcaggatatggtaatgtgttggcctt 566
            || || || || || |  |||  |||||||||||| |||||||| |||||||| ||||||
Sbjct: 2628 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 2569

                                                                        
Query: 567  gttgtcccaatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcag 626
            || || |||||||||||||| || || |||||||| |||||||  ||||||||||| |||
Sbjct: 2568 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 2509

                                       
Query: 627  acagcattatcaacaacagtgccagga 653
            || || || || |||||||| ||||||
Sbjct: 2508 actgcgttgtccacaacagtaccagga 2482



to top

>dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E08, full
            insert sequence
          Length = 3047

 Score =  168 bits (85), Expect = 1e-38
 Identities = 312/387 (80%), Gaps = 3/387 (0%)
 Strand = Plus / Minus

                                                                        
Query: 267  gctcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 326
            ||||||||||||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 2875 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 2816

                                                                        
Query: 327  gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 386
            ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 2815 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 2759

                                                                        
Query: 387  tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaa 446
            || ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |
Sbjct: 2758 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 2699

                                                                        
Query: 447  acaactgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaagatcc 506
            || |||||||| ||||| |||||||| ||||| ||||| || || || || || |  |||
Sbjct: 2698 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 2639

                                                                        
Query: 507  tgcaggtcatccgcggcaaagtgtatctcatcatgcaggatatggtaatgtgttggcctt 566
            || || || || || |  |||  |||||||||||| |||||||| |||||||| ||||||
Sbjct: 2638 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 2579

                                                                        
Query: 567  gttgtcccaatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcag 626
            || || |||||||||||||| || || |||||||| |||||||  ||||||||||| |||
Sbjct: 2578 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 2519

                                       
Query: 627  acagcattatcaacaacagtgccagga 653
            || || || || |||||||| ||||||
Sbjct: 2518 actgcgttgtccacaacagtaccagga 2492



to top

>dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H03, full
           insert sequence
          Length = 772

 Score =  168 bits (85), Expect = 1e-38
 Identities = 312/387 (80%), Gaps = 3/387 (0%)
 Strand = Plus / Minus

                                                                       
Query: 267 gctcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 326
           ||||||||||||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 574 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 515

                                                                       
Query: 327 gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 386
           ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 514 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 458

                                                                       
Query: 387 tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaa 446
           || ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |
Sbjct: 457 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 398

                                                                       
Query: 447 acaactgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaagatcc 506
           || |||||||| ||||| |||||||| ||||| ||||| || || || || || |  |||
Sbjct: 397 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 338

                                                                       
Query: 507 tgcaggtcatccgcggcaaagtgtatctcatcatgcaggatatggtaatgtgttggcctt 566
           || || || || || |  |||  |||||||||||| |||||||| |||||||| ||||||
Sbjct: 337 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 278

                                                                       
Query: 567 gttgtcccaatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcag 626
           || || |||||||||||||| || || |||||||| |||||||  ||||||||||| |||
Sbjct: 277 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 218

                                      
Query: 627 acagcattatcaacaacagtgccagga 653
           || || || || |||||||| ||||||
Sbjct: 217 actgcgttgtccacaacagtaccagga 191



to top

>ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa8518 predicted mRNA
          Length = 2715

 Score =  165 bits (83), Expect = 2e-37
 Identities = 310/385 (80%), Gaps = 3/385 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
            ||||||||||||||||  ||| | |||||| | ||| || |||||||||||  |||||||
Sbjct: 2715 tcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcaccgg 2656

                                                                        
Query: 329  gccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctcatc 388
              ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| ||
Sbjct: 2655 agcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcgtc 2599

                                                                        
Query: 389  aaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaac 448
             ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |||
Sbjct: 2598 gaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgcaac 2539

                                                                        
Query: 449  aactgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaagatcctg 508
             |||||||| ||||| |||||||| ||||| ||||| || || || || || |  |||||
Sbjct: 2538 gactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcctg 2479

                                                                        
Query: 509  caggtcatccgcggcaaagtgtatctcatcatgcaggatatggtaatgtgttggccttgt 568
             || || || || |  |||  |||||||||||| |||||||| |||||||| ||||||||
Sbjct: 2478 aagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggccttgt 2419

                                                                        
Query: 569  tgtcccaatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcagac 628
             || |||||||||||||| || || |||||||| |||||||  ||||||||||| |||||
Sbjct: 2418 agttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagac 2359

                                     
Query: 629  agcattatcaacaacagtgccagga 653
             || || || |||||||| ||||||
Sbjct: 2358 tgcgttgtccacaacagtaccagga 2334



to top

>gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full insert mRNA
            sequence
          Length = 1565

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
            ||||||||||||||||  ||| |  |||||||| || || |||||||||||| |||||||
Sbjct: 1171 tcagcagaagaacatggagctcctcactttctcgtgcagccgaggcagctccggcaccgg 1112

                                                                        
Query: 329  gccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctcatc 388
            | ||||| | | ||| |||||||| || ||||||||||||||||| || ||||| || ||
Sbjct: 1111 ggcgctgcccgcagacgtgtggccccctccctggctcgacgacgtgtccgacatgtcctc 1052

                        
Query: 389  aaactttatgaa 400
            |||||| |||||
Sbjct: 1051 aaacttcatgaa 1040



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 144/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 450 actgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaagatcctgc 509
           |||||||| || || |||||||| ||||||||||| |||||||| |||||||  ||||| 
Sbjct: 990 actgatatcgccgtcgtgctcctctggtacacataggagagcgagtgcacaaactcctgg 931

                                                                       
Query: 510 aggtcatccgcggcaaagtgtatctcatcatgcaggatatggtaatgtgttggccttgtt 569
           || |||||| |    |||   |||||||||||||| | ||||||||| |||||||| |  
Sbjct: 930 agctcatccccactgaagccgatctcatcatgcagaacatggtaatgcgttggcctcgac 871

                                                                   
Query: 570 gtcccaatcattccagcatgagcgcacatgtaaaagtcataattccttggatggca 625
           || |||||||| |||||||| ||||||||||| |||||| | ||| | ||||||||
Sbjct: 870 gtgccaatcatcccagcatgcgcgcacatgtagaagtcaaagttcttgggatggca 815



to top

>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11,
              complete sequence
          Length = 127419

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                  
Query: 574    caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggca 625
              ||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 122357 caatcattccagcatgagcacacatgtagaagtcataattccttggatggca 122408



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                          
Query: 477    tacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaaagtgtatctca 536
              |||||||||||||| || ||||| || |||||||| ||||| | ||  ||   |||||||
Sbjct: 122161 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 122220

                                           
Query: 537    tcatgcaggatatggtaatgtgttggcct 565
              || ||||| | ||| ||||||||||||||
Sbjct: 122221 tcgtgcagaacatgataatgtgttggcct 122249



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                          
Query: 269    tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
              ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 121776 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 121835



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 406    ccacctgagcagctgcaagatgtgcatagca 436
              ||||||||||||| |||||||| ||||||||
Sbjct: 121910 ccacctgagcagcagcaagatgggcatagca 121940



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 574     caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggca 625
               ||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 3533062 caatcattccagcatgagcacacatgtagaagtcataattccttggatggca 3533113



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                           
Query: 477     tacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaaagtgtatctca 536
               |||||||||||||| || ||||| || |||||||| ||||| | ||  ||   |||||||
Sbjct: 3532866 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 3532925

                                            
Query: 537     tcatgcaggatatggtaatgtgttggcct 565
               || ||||| | ||| ||||||||||||||
Sbjct: 3532926 tcgtgcagaacatgataatgtgttggcct 3532954



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                           
Query: 269     tcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 328
               ||||||||| ||||||  ||| |  |||||||||||||| |||||||||||  |||||||
Sbjct: 3532481 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctcaggcaccgg 3532540



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 406     ccacctgagcagctgcaagatgtgcatagca 436
               ||||||||||||| |||||||| ||||||||
Sbjct: 3532615 ccacctgagcagcagcaagatgggcatagca 3532645



to top

>gb|BT013764.1| Lycopersicon esculentum clone 132647R, mRNA sequence
          Length = 3104

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 567  gttgtcccaatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcag 626
            ||||| |||||||||||||||||||| |||| ||||||||||||||||||||| || |||
Sbjct: 2547 gttgtaccaatcattccagcatgagcacacaggtaaaagtcataattccttgggtgacag 2488

              
Query: 627  ac 628
            ||
Sbjct: 2487 ac 2486



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                        
Query: 411  tgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgctc 470
            |||| ||| |||||||| ||||| ||||| |||| |||||| |||||||| || ||||| 
Sbjct: 2703 tgagtagcagcaagatgggcataacagataggagcaacaacagatattgcagtggtgctt 2644

                                
Query: 471  ctttggtacacataagagag 490
            || |||||||||||||||||
Sbjct: 2643 ctctggtacacataagagag 2624



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 138/170 (81%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                           
Query: 267     gctcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 326
               ||||||||||||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 9630504 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 9630563

                                                                           
Query: 327     gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 386
               ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 9630564 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 9630620

                                                                 
Query: 387     tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagca 436
               || ||||| ||||||||    ||||||||||| || ||||| || |||||
Sbjct: 9630621 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagca 9630670



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                           
Query: 574     caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcagacagcat 633
               ||||||||||||| || || |||||||| |||||||  ||||||||||| ||||| || |
Sbjct: 9631568 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 9631627

                            
Query: 634     tatcaacaacagt 646
               | || ||||||||
Sbjct: 9631628 tgtccacaacagt 9631640



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 530     tatctcatcatgcaggatatggtaatgtgttggccttgt 568
               |||||||||||| |||||||| |||||||| ||||||||
Sbjct: 9630944 tatctcatcatgaaggatatgataatgtgtaggccttgt 9630982



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 532     tctcatcatgcaggatatggtaatgtgttggccttgttgtccc 574
               ||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 9613132 tctcatcatgcagcacatggtaatgcgtcggccttgtagtccc 9613174



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                     
Query: 574     caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcaga 627
               ||||||| ||||||||||| |||||||| || ||| | ||||| ||||| ||||
Sbjct: 9614055 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacaga 9614108



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 231      catcaccaaaagttggaacg 250
                ||||||||||||||||||||
Sbjct: 21143571 catcaccaaaagttggaacg 21143552



to top

>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0038F12
          Length = 190014

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 138/170 (81%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                         
Query: 267   gctcagcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 326
             ||||||||||||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 68507 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 68566

                                                                         
Query: 327   gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 386
             ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 68567 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 68623

                                                               
Query: 387   tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagca 436
             || ||||| ||||||||    ||||||||||| || ||||| || |||||
Sbjct: 68624 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagca 68673



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcagacagcat 633
             ||||||||||||| || || |||||||| |||||||  ||||||||||| ||||| || |
Sbjct: 69571 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 69630

                          
Query: 634   tatcaacaacagt 646
             | || ||||||||
Sbjct: 69631 tgtccacaacagt 69643



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 530   tatctcatcatgcaggatatggtaatgtgttggccttgt 568
             |||||||||||| |||||||| |||||||| ||||||||
Sbjct: 68947 tatctcatcatgaaggatatgataatgtgtaggccttgt 68985



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 532   tctcatcatgcaggatatggtaatgtgttggccttgttgtccc 574
             ||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 51135 tctcatcatgcagcacatggtaatgcgtcggccttgtagtccc 51177



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcaga 627
             ||||||| ||||||||||| |||||||| || ||| | ||||| ||||| ||||
Sbjct: 52058 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacaga 52111



to top

>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds
          Length = 3018

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 465  gtgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggca 524
            |||||||| ||||| ||||| || || ||||||||||| || || ||||| || | ||||
Sbjct: 2614 gtgctcctctggtagacataggacagagaatgcacaagttcttggaggtcgtctgtggca 2555

                                                                        
Query: 525  aagtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattcca 584
            ||    ||||| |||| ||| | ||||||||||||||||||||| || |||||||| |||
Sbjct: 2554 aacccaatctcgtcatacagaacatggtaatgtgttggccttgtagttccaatcatgcca 2495

                       
Query: 585  gcatgagcgca 595
            ||||| |||||
Sbjct: 2494 gcatgggcgca 2484



to top

>dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-like protein, partial
            cds, clone: RAFL22-12-J01
          Length = 1966

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 465  gtgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggca 524
            |||||||| ||||| ||||| || || ||||||||||| || || ||||| || | ||||
Sbjct: 1552 gtgctcctctggtagacataggacagagaatgcacaagttcttggaggtcgtctgtggca 1493

                                                                        
Query: 525  aagtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattcca 584
            ||    ||||| |||| ||| | ||||||||||||||||||||| || |||||||| |||
Sbjct: 1492 aacccaatctcgtcatacagaacatggtaatgtgttggccttgtagttccaatcatgcca 1433

                       
Query: 585  gcatgagcgca 595
            ||||| |||||
Sbjct: 1432 gcatgggcgca 1422



to top

>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
            complete cds, clone: RAFL19-56-B01
          Length = 3090

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 465  gtgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggca 524
            |||||||| ||||| ||||| || || ||||||||||| || || ||||| || | ||||
Sbjct: 2679 gtgctcctctggtagacataggacagagaatgcacaagttcttggaggtcgtctgtggca 2620

                                                                        
Query: 525  aagtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattcca 584
            ||    ||||| |||| ||| | ||||||||||||||||||||| || |||||||| |||
Sbjct: 2619 aacccaatctcgtcatacagaacatggtaatgtgttggccttgtagttccaatcatgcca 2560

                       
Query: 585  gcatgagcgca 595
            ||||| |||||
Sbjct: 2559 gcatgggcgca 2549



to top

>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence
          Length = 124069

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                 
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggca 625
             ||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 65992 caatcattccagcatgagcacacatataaaaatcataattcctaggatggca 66043



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcataattcc 615
             ||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 74110 caatcattccagcatgagcacacatgtagaaatcataattcc 74151



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 387   tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggag 444
             |||||||| ||||||||  |||| |||| ||| || | ||| ||||||||||||||||
Sbjct: 73512 tcaaacttcatgaactgtcccacttgagaagcagccaaatgggcatagcagattggag 73569



to top

>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence
          Length = 96063

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                 
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggca 625
             ||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 87884 caatcattccagcatgagcacacatataaaaatcataattcctaggatggca 87833



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcataattcc 615
             ||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 79766 caatcattccagcatgagcacacatgtagaaatcataattcc 79725



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 387   tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggag 444
             |||||||| ||||||||  |||| |||| ||| || | ||| ||||||||||||||||
Sbjct: 80364 tcaaacttcatgaactgtcccacttgagaagcagccaaatgggcatagcagattggag 80307



to top

>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene)
          Length = 2897

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                        
Query: 465  gtgctcctttggtacacataagagagcgaatgcacaagatcctgcaggtcatccgcggca 524
            |||||||| ||||| ||||  || || ||||||||||| || || ||||| || | ||||
Sbjct: 2498 gtgctcctctggtagacatgggacagagaatgcacaagttcttggaggtcgtctgtggca 2439

                                                                        
Query: 525  aagtgtatctcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattcca 584
            ||    ||||| |||| ||| | ||||||||||||||||||||| || |||||||| |||
Sbjct: 2438 aacccaatctcgtcatacagaacatggtaatgtgttggccttgtagttccaatcatgcca 2379

                       
Query: 585  gcatgagcgca 595
            ||||| |||||
Sbjct: 2378 gcatgggcgca 2368



to top

>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
          Length = 2553

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 548  atggtaatgtgttggccttgttgtcccaatcattccagcatgagc 592
            ||||||||||||||||||||| || |||||| |||||||||||||
Sbjct: 2277 atggtaatgtgttggccttgtagttccaatctttccagcatgagc 2233



to top

>gb|DQ321491.1| Nicotiana benthamiana AGO4-2 mRNA, partial cds
          Length = 2715

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 435  cagattggagaaacaactgatattgctgttgtgctcctttggtacacataaga 487
            ||||| |||| |||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 2555 cagatgggagcaacaacagatattgcagttgtgctcctttggtagacataaga 2503



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 534  tcatcatgcaggatatggtaatgtgttggccttgttgtcccaatcattccagcatgagcg 593
            |||||||||| || |||||| ||||| || |  || || ||||||||||||||||| |||
Sbjct: 2456 tcatcatgcaagacatggtagtgtgtaggacgagtggtaccaatcattccagcatgggcg 2397

                                      
Query: 594  cacatgtaaaagtcataattccttgg 619
            |||| ||| || |||||||| |||||
Sbjct: 2396 cacaagtagaaatcataatttcttgg 2371



to top

>gb|AY104211.1| Zea mays PCO124720 mRNA sequence
          Length = 2052

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 440  tggagaaacaactgatattgctgttgtgctcctttggtacacataagagagcgaatgcac 499
            ||||| ||| ||||| || ||||| |||||||| |||||||| |||||||||||||| ||
Sbjct: 1697 tggagcaaccactgagatggctgtcgtgctcctctggtacacgtaagagagcgaatgaac 1638

                       
Query: 500  aagatcctgca 510
            ||  |||||||
Sbjct: 1637 aaactcctgca 1627



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 561  ggccttgttgtcccaatcattccagcatgagcgcacatgtaaaagtc 607
            ||||||||||| |||||||| |||||||| || |||||||| |||||
Sbjct: 1576 ggccttgttgttccaatcatcccagcatgtgcacacatgtagaagtc 1530



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 271  agcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcac 325
            ||||||||||||||  ||| | |||||| ||||| || |||||||||||| ||||
Sbjct: 1866 agcagaagaacatggagctcctgactttgtcatgcaggcgaggcagctccggcac 1812



to top

>gb|BT018108.1| Zea mays clone EL01N0553E01.c mRNA sequence
          Length = 1267

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                       
Query: 450 actgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaagatcctgc 509
           ||||| || ||||| |||||||| |||||||| |||||||||||||| ||||  ||||||
Sbjct: 896 actgagatggctgtcgtgctcctctggtacacgtaagagagcgaatgaacaaactcctgc 837

            
Query: 510 a 510
           |
Sbjct: 836 a 836



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 561 ggccttgttgtcccaatcattccagcatgagcgcacatgtaaaagtc 607
           ||||||||||| |||||||| |||||||| || |||||||| |||||
Sbjct: 785 ggccttgttgttccaatcatcccagcatgtgcacacatgtagaagtc 739



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 271  agcagaagaacatgctgctgcggactttctcatggagacgaggcagctcctgcac 325
            ||||||||||||||  ||| | |||||| ||||| || |||||||||||| ||||
Sbjct: 1075 agcagaagaacatggagctcctgactttgtcatgcaggcgaggcagctccggcac 1021



to top

>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
            complete cds
          Length = 3166

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 410  ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 469
            |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 2767 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 2708

                                                   
Query: 470  cctttggtacacataagagagcgaatgcacaagatcctg 508
             |||||||||||||| |||||||| || ||||| |||||
Sbjct: 2707 tctttggtacacataggagagcgagtggacaagttcctg 2669



to top

>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
            mRNA, complete cds
          Length = 2806

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 410  ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 469
            |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 2637 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 2578

                                                   
Query: 470  cctttggtacacataagagagcgaatgcacaagatcctg 508
             |||||||||||||| |||||||| || ||||| |||||
Sbjct: 2577 tctttggtacacataggagagcgagtggacaagttcctg 2539



to top

>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
            mRNA, complete cds
          Length = 3171

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 410  ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 469
            |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 2767 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 2708

                                                   
Query: 470  cctttggtacacataagagagcgaatgcacaagatcctg 508
             |||||||||||||| |||||||| || ||||| |||||
Sbjct: 2707 tctttggtacacataggagagcgagtggacaagttcctg 2669



to top

>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 838

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                       
Query: 410 ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 469
           |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 481 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 422

                                                  
Query: 470 cctttggtacacataagagagcgaatgcacaagatcctg 508
            |||||||||||||| |||||||| || ||||| |||||
Sbjct: 421 tctttggtacacataggagagcgagtggacaagttcctg 383



to top

>ref|XM_477327.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2670

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 396  atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 455
            ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 2546 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 2487

                                                  
Query: 456  attgctgttgtgctcctttggtacacataagagagcga 493
            ||||| || |||||||| || ||||||||||| |||||
Sbjct: 2486 attgcagtggtgctcctctgatacacataagaaagcga 2449



to top

>gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pinhead-like protein
           (ZP1) mRNA, complete cds
          Length = 1407

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 396 atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 455
           ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 982 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 923

                                                 
Query: 456 attgctgttgtgctcctttggtacacataagagagcga 493
           ||||| || |||||||| || ||||||||||| |||||
Sbjct: 922 attgcagtggtgctcctctgatacacataagaaagcga 885



to top

>gb|AY072819.1| Oryza sativa zwille/pinhead-like protein mRNA, partial cds
          Length = 879

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 396 atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 455
           ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 453 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 394

                                                 
Query: 456 attgctgttgtgctcctttggtacacataagagagcga 493
           ||||| || |||||||| || ||||||||||| |||||
Sbjct: 393 attgcagtggtgctcctctgatacacataagaaagcga 356



to top

>dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069G22, full
           insert sequence
          Length = 1211

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 396 atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 455
           ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 808 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 749

                                                 
Query: 456 attgctgttgtgctcctttggtacacataagagagcga 493
           ||||| || |||||||| || ||||||||||| |||||
Sbjct: 748 attgcagtggtgctcctctgatacacataagaaagcga 711



to top

>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence
          Length = 120527

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 624   cagacagcattatcaacaacagtg 647
             ||||||||||||||||||||||||
Sbjct: 87089 cagacagcattatcaacaacagtg 87112



to top

>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
             sequence
          Length = 112600

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                         
Query: 477   tacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaaagtgtatctca 536
             |||||||| || || ||||||||||| || || ||||| || | ||||||    ||||| 
Sbjct: 77221 tacacataggacagagaatgcacaagttcttggaggtcgtctgtggcaaacccaatctcg 77280

                                             
Query: 537   tcatgcaggatatggtaatgtgttggccttgt 568
             |||| ||| | |||||||||||||||||||||
Sbjct: 77281 tcatacagaacatggtaatgtgttggccttgt 77312



to top

>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
             V, complete sequence
          Length = 84413

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                         
Query: 477   tacacataagagagcgaatgcacaagatcctgcaggtcatccgcggcaaagtgtatctca 536
             |||||||| || || ||||||||||| || || ||||| || | ||||||    ||||| 
Sbjct: 12306 tacacataggacagagaatgcacaagttcttggaggtcgtctgtggcaaacccaatctcg 12365

                                             
Query: 537   tcatgcaggatatggtaatgtgttggccttgt 568
             |||| ||| | |||||||||||||||||||||
Sbjct: 12366 tcatacagaacatggtaatgtgttggccttgt 12397



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 548   atggtaatgtgttggccttgt 568
             |||||||||||||||||||||
Sbjct: 69677 atggtaatgtgttggccttgt 69657



to top

>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence
          Length = 100208

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 624   cagacagcattatcaacaacagtg 647
             ||||||||||||||||||||||||
Sbjct: 66388 cagacagcattatcaacaacagtg 66365



to top

>dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031,
             complete sequence
          Length = 97191

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 574   caatcattccagcatgagcgcacatgtaaaagtcat 609
             |||||||||||||||| |||||||| || |||||||
Sbjct: 59563 caatcattccagcatgtgcgcacatatagaagtcat 59528



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 420   gcaagatgtgcatagcagattggag 444
             |||||||| ||||||||||||||||
Sbjct: 60546 gcaagatgagcatagcagattggag 60522



to top

>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0424A08
          Length = 151294

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 532    tctcatcatgcaggatatggtaatgtgttggccttgttgtccc 574
              ||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 146561 tctcatcatgcagcacatggtaatgcgtcggccttgtagtccc 146603



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                    
Query: 574    caatcattccagcatgagcgcacatgtaaaagtcataattccttggatggcaga 627
              ||||||| ||||||||||| |||||||| || ||| | ||||| ||||| ||||
Sbjct: 147484 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacaga 147537



to top

>gb|DQ321490.1| Nicotiana benthamiana AGO4-1 mRNA, partial cds
          Length = 2736

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 548  atggtaatgtgttggccttgttgtcccaatcattccagcatgagcgcacatgtaaaagtc 607
            |||||||||||| || |  || || |||||||| || ||||| || |||| ||| |||||
Sbjct: 2463 atggtaatgtgtaggtcgagtggtaccaatcatgcctgcatgggcacacaggtagaagtc 2404

                           
Query: 608  ataattccttggatg 622
            ||| |||||||||||
Sbjct: 2403 atagttccttggatg 2389



to top

>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
          Length = 2637

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 387  tcaaactttatgaactgcgccacctgagcagctgcaagatg 427
            ||||||||| |||| ||||| || ||||| |||||||||||
Sbjct: 2558 tcaaactttgtgaattgcgcaacttgagctgctgcaagatg 2518



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 539     atgcaggatatggtaatgtgt 559
               |||||||||||||||||||||
Sbjct: 1615428 atgcaggatatggtaatgtgt 1615408



to top

>gb|BC033195.1| Homo sapiens leukocyte receptor cluster (LRC) member 12, mRNA (cDNA
            clone MGC:45839 IMAGE:4849085), complete cds
          Length = 2553

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 19   attaaaggtgcaaatttgaag 39
            |||||||||||||||||||||
Sbjct: 1539 attaaaggtgcaaatttgaag 1559



to top

>emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chromosome 1 Contains the 5'
              end of the SLC9A1 gene for solute carrier family 9
              (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+,
              amiloride sensitive), a ribosomal protein L18a (RPL18A)
              pseudogene, a novel pseudogene (FLJ20420), a nucleophosmin
              (nucleolar phosphoprotein B23, numatrin)(NPM1) pseudogene,
              a mall nuclear ribonucleoprotein polypeptide E (SNRPE)
              pseudogene, a novel gene, the 5' end of a novel gene
              (KIAA1037) and a CpG island, complete sequence
          Length = 147052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 438    attggagaaacaactgatatt 458
              |||||||||||||||||||||
Sbjct: 113826 attggagaaacaactgatatt 113806



to top

>emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on chromosome X, complete
              sequence
          Length = 192780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 438    attggagaaacaactgatatt 458
              |||||||||||||||||||||
Sbjct: 117708 attggagaaacaactgatatt 117728



to top

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 539   atgcaggatatggtaatgtgt 559
             |||||||||||||||||||||
Sbjct: 22874 atgcaggatatggtaatgtgt 22854



to top

>ref|NM_033206.1| Homo sapiens leukocyte receptor cluster (LRC) member 12 (LENG12),
            mRNA
          Length = 2553

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 19   attaaaggtgcaaatttgaag 39
            |||||||||||||||||||||
Sbjct: 1539 attaaaggtgcaaatttgaag 1559



to top

>emb|CR759950.3| Gorilla DNA sequence from clone CH255-431H18, complete sequence
          Length = 177306

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    attaaaggtgcaaatttgaag 39
             |||||||||||||||||||||
Sbjct: 19258 attaaaggtgcaaatttgaag 19278



to top

>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
             sequence
          Length = 96801

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 387   tcaaactttatgaactgcgccacctgagcagctgcaagatg 427
             ||||||||| |||| ||||| || ||||| |||||||||||
Sbjct: 51188 tcaaactttgtgaattgcgcaacttgagctgctgcaagatg 51148



to top

>gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, complete sequence
          Length = 202847

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 456   attgctgttgtgctcctttgg 476
             |||||||||||||||||||||
Sbjct: 43796 attgctgttgtgctcctttgg 43816



to top

>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence
          Length = 194860

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 438   attggagaaacaactgatatt 458
             |||||||||||||||||||||
Sbjct: 85987 attggagaaacaactgatatt 85967



to top

>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
             complete sequence
          Length = 127098

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 539   atgcaggatatggtaatgtgt 559
             |||||||||||||||||||||
Sbjct: 94989 atgcaggatatggtaatgtgt 94969



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 539     atgcaggatatggtaatgtgt 559
               |||||||||||||||||||||
Sbjct: 1615426 atgcaggatatggtaatgtgt 1615406



to top

>gb|AC022882.5|AC022882 Homo sapiens chromosome 11, clone RP11-444K7, complete sequence
          Length = 174469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 438   attggagaaacaactgatatt 458
             |||||||||||||||||||||
Sbjct: 90207 attggagaaacaactgatatt 90227



to top

>gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete sequence
          Length = 157285

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 379    acatctcatcaaactttatga 399
              |||||||||||||||||||||
Sbjct: 140262 acatctcatcaaactttatga 140282



to top

>gb|AC009892.5|AC009892 Homo sapiens chromosome 19 clone CTB-83J4, complete sequence
          Length = 134008

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    attaaaggtgcaaatttgaag 39
             |||||||||||||||||||||
Sbjct: 15938 attaaaggtgcaaatttgaag 15958



to top

>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
          Length = 96102

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 548   atggtaatgtgttggccttgt 568
             |||||||||||||||||||||
Sbjct: 84037 atggtaatgtgttggccttgt 84057



to top

>dbj|AK024467.1| Homo sapiens mRNA for FLJ00060 protein, partial cds
          Length = 4305

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 19   attaaaggtgcaaatttgaag 39
            |||||||||||||||||||||
Sbjct: 3325 attaaaggtgcaaatttgaag 3345



to top

>ref|XM_309632.2| Anopheles gambiae str. PEST ENSANGP00000004077 (ENSANGG00000003238),
            partial mRNA
          Length = 1875

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 573  ccaatcattccagcatgagcg 593
            |||||||||||||||||||||
Sbjct: 1232 ccaatcattccagcatgagcg 1252



to top

>emb|AL928586.10| Mouse DNA sequence from clone RP23-353H5 on chromosome 2, complete
             sequence
          Length = 105895

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 267   gctcagcagaagaacatgctgctgc 291
             |||||||||||||||||||| ||||
Sbjct: 94463 gctcagcagaagaacatgctcctgc 94487



to top

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 539   atgcaggatatggtaatgtgt 559
             |||||||||||||||||||||
Sbjct: 27891 atgcaggatatggtaatgtgt 27871



to top

>gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete sequence
          Length = 110295

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 594   cacatgtaaaagtcataatt 613
             ||||||||||||||||||||
Sbjct: 13738 cacatgtaaaagtcataatt 13757



to top

>gb|AC134242.17| Medicago truncatula clone mth2-10p20, complete sequence
          Length = 115005

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   ctgatattgctgttgtgctc 470
             ||||||||||||||||||||
Sbjct: 94016 ctgatattgctgttgtgctc 94035



to top

>gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete sequence
          Length = 133085

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 594    cacatgtaaaagtcataatt 613
              ||||||||||||||||||||
Sbjct: 110218 cacatgtaaaagtcataatt 110237



to top

>emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chromosome 6, complete
              sequence
          Length = 157588

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 597    atgtaaaagtcataattcct 616
              ||||||||||||||||||||
Sbjct: 146360 atgtaaaagtcataattcct 146341



to top

>emb|AL139137.15| Human DNA sequence from clone RP11-58O13 on chromosome 1, complete
             sequence
          Length = 137269

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   ttggagaaacaactgatatt 458
             ||||||||||||||||||||
Sbjct: 10252 ttggagaaacaactgatatt 10233



to top

>emb|CR352964.1| Gallus gallus finished cDNA, clone ChEST539n4
          Length = 968

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 600 taaaagtcataattccttgg 619
           ||||||||||||||||||||
Sbjct: 957 taaaagtcataattccttgg 938



to top

>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144D11
          Length = 157943

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    catcaccaaaagttggaacg 250
              ||||||||||||||||||||
Sbjct: 111116 catcaccaaaagttggaacg 111097



to top

>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1064G04
          Length = 186704

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   catcaccaaaagttggaacg 250
             ||||||||||||||||||||
Sbjct: 41080 catcaccaaaagttggaacg 41061



to top

>gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, complete sequence
          Length = 76158

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 268   ctcagcagaagaacatgctgctgc 291
             |||| |||||||||||||||||||
Sbjct: 35520 ctcaccagaagaacatgctgctgc 35543



to top

>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 268    ctcagcagaagaacatgctgctgc 291
              |||| |||||||||||||||||||
Sbjct: 162327 ctcaccagaagaacatgctgctgc 162350



to top

>emb|BX511094.6| Zebrafish DNA sequence from clone CH211-137G12 in linkage group 19,
             complete sequence
          Length = 154360

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   gctcagcagaagaacatgct 286
             ||||||||||||||||||||
Sbjct: 97639 gctcagcagaagaacatgct 97620


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,288,301
Number of Sequences: 3902068
Number of extensions: 5288301
Number of successful extensions: 98061
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97723
Number of HSP's gapped (non-prelim): 321
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top